Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

3732109 .. 3736047

Gene Structure 3939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG052100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGTCCACAACTCCGGCGCCCTCCTCGCCGCCGACCAACACCACCTCCCCACCACCCGCCGCACCGGCTCCCACAACCCCAAGCGCTCCTCCGCCAACAACCCCAAGCGCTCCTCCGCCAACAACTCCCGCCACTCCACCGCCCACAACTCCCGCCACTCCACCGCCGACGACCCCCAGCGCGCCGCCTCCCGCGACTCCGGCATCCCCACCGCCGCCGTCAGGTACCCCACCTTCACCTTCACCCCCAGCGCCCTCCACCCCAGCTCCGACATCTCCGGGGTCCTCGCCGCCGCCGCCGTCCACCCCAACCGTCACATCGCCGCCTCCCCCCAAAACGCCGTCGACGAACAAGAGCCCTCCGCCGCCCAAGTCGCCGTCGACAACACCGTCGCCGTCGTCGCCGTCGTCATCGGGATTGGATACTGGGGTTATAGTCGGAATTGCTGTTGGGGCTGTGGCGATTCTAGTGGTGCTCAGTCTTTGCTGCATTTTTTGCTCCAAGAAGAAGAGGAGAAGAAGAGAGGAGCCTGTCTATTATGTGCCCCCGCCGCCGCCTCCAACCGGCCCTAAAGGCGAAATTTACTACGGTCCACCACGCCCGCATCAAAATACTCCTCCTCCACCTGCAGATCATCATGTAATCACAATGCCTAAGCCACCTCCTGCACAAGCTGTAGCATCCAGGCCACCGCCCTCGCCAGGATATACACCGCCACCGCAGCCATACAGCAGTGGAGGTTCTGGTTCCAATTATTCAGGGTCTGAAACTGCACTCCCACCACCTCCGCCACCGGGGTATTCCTTGGGATTCTCTAAAAGCACGTTTACTTATGACGAACTGGCTTTGGCAACGGAAGGGTTCTCGGATTCCAATCTCCTTGGACAGGGTGGGTTTGGATATGTTCACAAAGGAGTTCTTCCCAATGGGAAGGAAGTAGCGGTCAAGCAGCTGAAGGCTGGAAGTGGGCAAGGGGAACGTGAATTCCAGGCAGAAGTTGAAATTATTAGCCGTGTACATCACAGACATCTGGTTTCGCTGGTTGGATACTGCATGACTGGATCCGAGAGACTACTTGTCTATGAATTTGTTCCAAATAACACTATGGAGTTCCACTTACATGGAAAAGGGAGACCTACCATGGATTGGTCCACAAGACTGAAAATCGCTTTAGGATCTGCAAAAGGACTGGCATATCTTCATGAGGATTGTCATCCTAAAATCATTCATCGTGATATCAAAGCAGCTAATATACTTTTGGATTTCAAGTTTGAGTGCAAGGTTGCAGACTTTGGTCTTGCCAAGCTTTCTTCTGATCTTAATACTCATGTTTCCACCCGAGTGATGGGGACTTTTGGGTATCTAGCTCCAGAATACGCTTCTAGTGGAAAACTCACAGACAAGTCAGATGTTTTCTCATTCGGGGTTATGCTTTTGGAGTTGATTACTGGACGCCGCCCGGTTGACGCATCTCATACATACATAGAGGACAGTTTGGTAGAGTGGGCAAGGCCCGTTCTGACTCGAGCTTTGGAATCAGATGACTTTGATGAACTGGTTGATCCTAGACTGCAGAATAGTTTTGACCACAATGAGATGGCTCGCATGGTTGCTTGTGCTGCAGCTTGTGTACGACATTCTGCAAGGCGACGACCACGAATGAGTCAGGTTGTCCGTGCTTTAGAGGGAGATGTGTCTCTGTCTGATCTGAACGAAGGAATCAGGCCTGGGCATAGCAGTGTCTACAGTTCCCACGGAAGCTCAGACTATGACTCAAGGCCTTATGACACAAAGCAACGCAATCTGGATATGATAAACCACAGGAAGATGGCATTGGAAAGCCAGGAGTACGGCGCTAGTAGCGAGTACAGTGGTGGTCGCACCACCAGCGAGTATGGTTTGAACCCATCTGGTTCAAGCAGTGAAGGCCAACGAACCCGGGAAACCACCAGAGAAATGGAGCTGGGAAAGATGAACAAGAACAATCGAGGTTACAGTGGAAGCTCTGAGTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

671

Amino Acids

71.33

Weight (kDa)

8.26

Isoelectric Point (pI)

68.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	290 - 494	3.4e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	292 - 561	8.4e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	634
AasI	GACNNNNNNGTC	1 cut(s)	388
Acc36I	ACCTGC	1 cut(s)	634
Acc65I	GGTACC	1 cut(s)	224
AccB1I	GGYRCC	2 cut(s)	16, 224
AccB7I	CCANNNNNTGG	1 cut(s)	1146
AccI	GTMKAC	3 cut(s)	344, 380, 1743
AccII	CGCG	2 cut(s)	182, 194
AclWI	GGATC	4 cut(s)	1056, 1069, 1183, 1556
AcsI	RAATTY	3 cut(s)	579, 983, 1085
AcuI	CTGAAG	1 cut(s)	974
AcyI	GRCGYC	2 cut(s)	17, 1453
AfaI	GTAC	5 cut(s)	226, 1017, 1632, 1850, 1868
AfeI	AGCGCT	2 cut(s)	85, 109
AfiI	CCNNNNNNNGG	7 cut(s)	221, 563, 701, 794, 886, 1146, 1345
AgsI	TTSAA	4 cut(s)	1001, 1267, 1903, 1917
AhdI	GACNNNNNGTC	1 cut(s)	1076
AjnI	CCWGG	5 cut(s)	683, 700, 987, 1726, 1842
AjuI	GAANNNNNNNTTGG	2 cut(s)	1817, 1849
AleI	CACNNNNGTG	1 cut(s)	1340
AloI	GAACNNNNNNTCC	2 cut(s)	969, 1001
Alw21I	GWGCWC	1 cut(s)	477
Alw26I	GTCTC	3 cut(s)	1063, 1126, 1701
AlwI	GGATC	4 cut(s)	1056, 1069, 1183, 1556
AlwNI	CAGNNNCTG	1 cut(s)	764
Ama87I	CYCGRG	3 cut(s)	1338, 1524, 1938
Aor51HI	AGCGCT	2 cut(s)	85, 109
AoxI	GGCC	6 cut(s)	565, 686, 1511, 1724, 1778, 1927
ApeKI	GCWGC	6 cut(s)	486, 721, 949, 1244, 1619, 1622
ApoI	RAATTY	3 cut(s)	579, 983, 1085
ArsI	GACNNNNNNTTYG	2 cut(s)	1513, 1545
Asp700I	GAANNNNTTC	1 cut(s)	1089
Asp718I	GGTACC	1 cut(s)	224
AspLEI	GCGC	7 cut(s)	19, 86, 110, 182, 184, 253, 1856
AspS9I	GGNCC	5 cut(s)	282, 566, 590, 1149, 1512
AsuC2I	CCSGG	5 cut(s)	279, 795, 1460, 1939, 1940
AsuHPI	GGTGA	2 cut(s)	228, 234
AvaI	CYCGRG	3 cut(s)	1338, 1524, 1938
AvaII	GGWCC	3 cut(s)	282, 590, 1149
BaeGI	GKGCMC	1 cut(s)	546
BaeI	ACNNNNGTAYC	2 cut(s)	414, 447
BamHI	GGATCC	1 cut(s)	1061
BanI	GGYRCC	2 cut(s)	16, 224
BanII	GRGCYC	1 cut(s)	359
BarI	GAAGNNNNNNTAC	2 cut(s)	217, 249
Bbv12I	GWGCWC	1 cut(s)	477
BbvI	GCAGC	6 cut(s)	473, 733, 961, 1256, 1606, 1634
BccI	CCATC	4 cut(s)	1339, 1591, 1822, 1915
BceAI	ACGGC	8 cut(s)	202, 283, 325, 361, 379, 388, 996, 1867
BciT130I	CCWGG	5 cut(s)	685, 702, 989, 1728, 1844
BciVI	GTATCC	2 cut(s)	415, 1040
BcnI	CCSGG	5 cut(s)	279, 795, 1460, 1939, 1940
BcoDI	GTCTC	3 cut(s)	1063, 1126, 1701
BfaI	CTAG	5 cut(s)	467, 1364, 1383, 1566, 1857
BfmI	CTRYAG	5 cut(s)	627, 675, 1571, 1620, 1744
BfoI	RGCGCY	5 cut(s)	20, 87, 111, 254, 1857
BfuAI	ACCTGC	1 cut(s)	634
BfuI	GTATCC	2 cut(s)	415, 1040
BglI	GCCNNNNNGGC	2 cut(s)	65, 573
Bme18I	GGWCC	3 cut(s)	282, 590, 1149
BmeRI	GACNNNNNGTC	1 cut(s)	1076
BmeT110I	CYCGRG	3 cut(s)	1338, 1524, 1938
BmgT120I	GGNCC	5 cut(s)	282, 566, 590, 1149, 1512
BmiI	GGNNCC	7 cut(s)	18, 69, 226, 283, 528, 748, 1063
BmrI	ACTGGG	1 cut(s)	435
BmsI	GCATC	4 cut(s)	212, 613, 689, 1478
BmuI	ACTGGG	1 cut(s)	435
BoxI	GACNNNNGTC	1 cut(s)	1293
BpmI	CTGGAG	1 cut(s)	1353
Bpu10I	CCTNAGC	1 cut(s)	654
BpuEI	CTTGAG	1 cut(s)	1759
BpuMI	CCSGG	5 cut(s)	279, 795, 1460, 1939, 1940
BsaBI	GATNNNNATC	2 cut(s)	873, 1212
BsaHI	GRCGYC	2 cut(s)	17, 1453
BsaI	GGTCTC	1 cut(s)	1126
BsaJI	CCNNGG	8 cut(s)	278, 794, 804, 880, 1140, 1727, 1753, 1938
BsaXI	ACNNNNNCTCC	6 cut(s)	29, 59, 250, 280, 604, 634
Bsc4I	CCNNNNNNNGG	7 cut(s)	221, 563, 701, 794, 886, 1146, 1345
Bse118I	RCCGGY	2 cut(s)	64, 563
Bse1I	ACTGG	6 cut(s)	430, 846, 1063, 1194, 1453, 1560
Bse8I	GATNNNNATC	2 cut(s)	873, 1212
BseBI	CCWGG	5 cut(s)	685, 702, 989, 1728, 1844
BseDI	CCNNGG	8 cut(s)	278, 794, 804, 880, 1140, 1727, 1753, 1938
BseGI	GGATG	3 cut(s)	203, 680, 1213
BseJI	GATNNNNATC	2 cut(s)	873, 1212
BseLI	CCNNNNNNNGG	7 cut(s)	221, 563, 701, 794, 886, 1146, 1345
BseMII	CTCAG	3 cut(s)	490, 1776, 1998
BseNI	ACTGG	6 cut(s)	430, 846, 1063, 1194, 1453, 1560
BsePI	GCGCGC	1 cut(s)	180
BseRI	GAGGAG	7 cut(s)	13, 78, 102, 526, 539, 606, 609
BseSI	GKGCMC	1 cut(s)	546
BseXI	GCAGC	6 cut(s)	473, 733, 961, 1256, 1606, 1634
BseYI	CCCAGC	4 cut(s)	176, 247, 262, 1963
BsgI	GTGCAG	2 cut(s)	651, 756
Bsh1236I	CGCG	2 cut(s)	182, 194
BshFI	GGCC	6 cut(s)	567, 688, 1513, 1726, 1780, 1929
BshNI	GGYRCC	2 cut(s)	16, 224
BsiHKAI	GWGCWC	1 cut(s)	477
BsiHKCI	CYCGRG	3 cut(s)	1338, 1524, 1938
BsiSI	CCGG	8 cut(s)	14, 65, 200, 278, 564, 794, 1460, 1939
BslFI	GGGAC	1 cut(s)	1363
BslI	CCNNNNNNNGG	7 cut(s)	221, 563, 701, 794, 886, 1146, 1345
BsmAI	GTCTC	3 cut(s)	1063, 1126, 1701
BsmFI	GGGAC	1 cut(s)	1363
BsnI	GGCC	6 cut(s)	567, 688, 1513, 1726, 1780, 1929
Bso31I	GGTCTC	1 cut(s)	1126
BsoBI	CYCGRG	3 cut(s)	1338, 1524, 1938
Bsp1286I	GDGCHC	3 cut(s)	359, 477, 546
Bsp1407I	TGTACA	1 cut(s)	1015
Bsp143I	GATC	6 cut(s)	631, 1061, 1175, 1315, 1561, 1705
Bsp19I	CCATGG	1 cut(s)	1140
BspANI	GGCC	6 cut(s)	567, 688, 1513, 1726, 1780, 1929
BspCNI	CTCAG	3 cut(s)	489, 1775, 1999
BspFNI	CGCG	2 cut(s)	182, 194
BspHI	TCATGA	1 cut(s)	1201
BspLI	GGNNCC	7 cut(s)	18, 69, 226, 283, 528, 748, 1063
BspMAI	CTGCAG	3 cut(s)	631, 1575, 1624
BspMI	ACCTGC	1 cut(s)	634
BspPI	GGATC	4 cut(s)	1056, 1069, 1183, 1556
BspT107I	GGYRCC	2 cut(s)	16, 224
BspTNI	GGTCTC	1 cut(s)	1126
BsrFI	RCCGGY	2 cut(s)	64, 563
BsrGI	TGTACA	1 cut(s)	1015
BsrI	ACTGG	6 cut(s)	430, 846, 1063, 1194, 1453, 1560
BssAI	RCCGGY	2 cut(s)	64, 563
BssECI	CCNNGG	8 cut(s)	278, 794, 804, 880, 1140, 1727, 1753, 1938
BssHII	GCGCGC	1 cut(s)	180
BssMI	GATC	6 cut(s)	631, 1061, 1175, 1315, 1561, 1705
BssNI	GRCGYC	2 cut(s)	17, 1453
BssT1I	CCWWGG	3 cut(s)	804, 880, 1140
Bst2UI	CCWGG	5 cut(s)	685, 702, 989, 1728, 1844
Bst4CI	ACNGT	7 cut(s)	313, 390, 590, 1493, 1748, 1871, 1997
Bst6I	CTCTTC	2 cut(s)	503, 514
BstACI	GRCGYC	2 cut(s)	17, 1453
BstAPI	GCANNNNNTGC	1 cut(s)	495
BstAUI	TGTACA	1 cut(s)	1015
BstC8I	GCNNGC	3 cut(s)	182, 602, 1603
BstDEI	CTNAG	4 cut(s)	476, 654, 1762, 2007
BstDSI	CCRYGG	2 cut(s)	1140, 1753
BstENI	CCTNNNNNAGG	1 cut(s)	884
BstF5I	GGATG	3 cut(s)	203, 680, 1213
BstFNI	CGCG	2 cut(s)	182, 194
BstH2I	RGCGCY	5 cut(s)	20, 87, 111, 254, 1857
BstHHI	GCGC	7 cut(s)	19, 86, 110, 182, 184, 253, 1856
BstKTI	GATC	6 cut(s)	634, 1064, 1178, 1318, 1564, 1708
BstMAI	GTCTC	3 cut(s)	1063, 1126, 1701
BstMBI	GATC	6 cut(s)	631, 1061, 1175, 1315, 1561, 1705
BstNI	CCWGG	5 cut(s)	685, 702, 989, 1728, 1844
BstPAI	GACNNNNGTC	1 cut(s)	1293
BstSFI	CTRYAG	5 cut(s)	627, 675, 1571, 1620, 1744
BstSLI	GKGCMC	1 cut(s)	546
BstUI	CGCG	2 cut(s)	182, 194
BstV1I	GCAGC	6 cut(s)	473, 733, 961, 1256, 1606, 1634
BstX2I	RGATCY	2 cut(s)	1061, 1175
BstXI	CCANNNNNNTGG	2 cut(s)	1121, 1957
BstYI	RGATCY	2 cut(s)	1061, 1175
BsuI	GTATCC	2 cut(s)	415, 1040
BsuRI	GGCC	6 cut(s)	567, 688, 1513, 1726, 1780, 1929
BtgI	CCRYGG	2 cut(s)	1140, 1753
BtgZI	GCGATG	1 cut(s)	303
BtsCI	GGATG	3 cut(s)	203, 680, 1213
BtsI	GCAGTG	3 cut(s)	739, 1744, 1927
BtsIMutI	CAGTG	5 cut(s)	739, 1744, 1876, 1927, 2002
BveI	ACCTGC	1 cut(s)	634
Cac8I	GCNNGC	3 cut(s)	182, 602, 1603
CaiI	CAGNNNCTG	1 cut(s)	764
CciI	TCATGA	1 cut(s)	1201
CfoI	GCGC	7 cut(s)	19, 86, 110, 182, 184, 253, 1856
Cfr10I	RCCGGY	2 cut(s)	64, 563
Cfr13I	GGNCC	5 cut(s)	282, 566, 590, 1149, 1512
Cfr9I	CCCGGG	1 cut(s)	1938
CseI	GACGC	2 cut(s)	1461, 1475
Csp6I	GTAC	5 cut(s)	225, 1016, 1631, 1849, 1867
CviAII	CATG	7 cut(s)	638, 1054, 1121, 1141, 1202, 1328, 1606
CviQI	GTAC	5 cut(s)	225, 1016, 1631, 1849, 1867
DdeI	CTNAG	4 cut(s)	476, 654, 1762, 2007
DinI	GGCGCC	1 cut(s)	18
DpnI	GATC	6 cut(s)	633, 1063, 1177, 1317, 1563, 1707
DpnII	GATC	6 cut(s)	631, 1061, 1175, 1315, 1561, 1705
DrdI	GACNNNNNNGTC	1 cut(s)	388
DriI	GACNNNNNGTC	1 cut(s)	1076
DseDI	GACNNNNNNGTC	1 cut(s)	388
Eam1104I	CTCTTC	2 cut(s)	503, 514
Eam1105I	GACNNNNNGTC	1 cut(s)	1076
EarI	CTCTTC	2 cut(s)	503, 514
EciI	GGCGGA	4 cut(s)	81, 105, 351, 777
Eco130I	CCWWGG	3 cut(s)	804, 880, 1140
Eco147I	AGGCCT	2 cut(s)	1726, 1780
Eco24I	GRGCYC	1 cut(s)	359
Eco31I	GGTCTC	1 cut(s)	1126
Eco32I	GATATC	1 cut(s)	1237
Eco47I	GGWCC	3 cut(s)	282, 590, 1149
Eco47III	AGCGCT	2 cut(s)	85, 109
Eco57I	CTGAAG	1 cut(s)	974
Eco88I	CYCGRG	3 cut(s)	1338, 1524, 1938
EcoNI	CCTNNNNNAGG	1 cut(s)	884
EcoO109I	RGGNCCY	1 cut(s)	282
EcoRI	GAATTC	1 cut(s)	983
EcoRII	CCWGG	5 cut(s)	683, 700, 987, 1726, 1842
EcoRV	GATATC	1 cut(s)	1237
EcoT14I	CCWWGG	3 cut(s)	804, 880, 1140
EcoT38I	GRGCYC	1 cut(s)	359
EgeI	GGCGCC	1 cut(s)	18
EheI	GGCGCC	1 cut(s)	18
ErhI	CCWWGG	3 cut(s)	804, 880, 1140
FaeI	CATG	7 cut(s)	641, 1057, 1124, 1144, 1205, 1331, 1609
FalI	AAGNNNNNCTT	2 cut(s)	903, 935
FaqI	GGGAC	1 cut(s)	1363
FatI	CATG	7 cut(s)	637, 1053, 1120, 1140, 1201, 1327, 1605
FauI	CCCGC	6 cut(s)	64, 136, 160, 199, 555, 609
FblI	GTMKAC	3 cut(s)	344, 380, 1743
FokI	GGATG	3 cut(s)	190, 667, 1200
FriOI	GRGCYC	1 cut(s)	359
FspBI	CTAG	5 cut(s)	467, 1364, 1383, 1566, 1857
GlaI	GCGC	7 cut(s)	18, 85, 109, 181, 183, 252, 1855
GsaI	CCCAGC	4 cut(s)	180, 251, 266, 1967
GsuI	CTGGAG	1 cut(s)	1353
HaeII	RGCGCY	5 cut(s)	20, 87, 111, 254, 1857
HaeIII	GGCC	6 cut(s)	567, 688, 1513, 1726, 1780, 1929
HapII	CCGG	8 cut(s)	14, 65, 200, 278, 564, 794, 1460, 1939
HgaI	GACGC	2 cut(s)	1461, 1475
HhaI	GCGC	7 cut(s)	19, 86, 110, 182, 184, 253, 1856
Hin1I	GRCGYC	2 cut(s)	17, 1453
Hin1II	CATG	7 cut(s)	641, 1057, 1124, 1144, 1205, 1331, 1609
Hin6I	GCGC	7 cut(s)	17, 84, 108, 180, 182, 251, 1854
HinP1I	GCGC	7 cut(s)	17, 84, 108, 180, 182, 251, 1854
HincII	GTYRAC	3 cut(s)	345, 381, 1465
HindII	GTYRAC	3 cut(s)	345, 381, 1465
HindIII	AAGCTT	1 cut(s)	1304
HinfI	GANTC	9 cut(s)	196, 463, 810, 869, 1522, 1535, 1663, 1719, 1772
HpaII	CCGG	8 cut(s)	14, 65, 200, 278, 564, 794, 1460, 1939
HphI	GGTGA	2 cut(s)	228, 234
Hpy188III	TCNNGA	5 cut(s)	414, 1202, 1232, 1370, 1805
Hpy99I	CGWCG	9 cut(s)	172, 346, 349, 382, 394, 400, 403, 409, 1653
HpyAV	CCTTC	7 cut(s)	243, 249, 851, 925, 949, 1709, 1919
HpyCH4III	ACNGT	7 cut(s)	313, 390, 590, 1493, 1748, 1871, 1997
HpyCH4IV	ACGT	2 cut(s)	824, 979
HpyF3I	CTNAG	4 cut(s)	476, 654, 1762, 2007
HpySE526I	ACGT	2 cut(s)	824, 979
Hsp92I	GRCGYC	2 cut(s)	17, 1453
Hsp92II	CATG	7 cut(s)	641, 1057, 1124, 1144, 1205, 1331, 1609
HspAI	GCGC	7 cut(s)	17, 84, 108, 180, 182, 251, 1854
KasI	GGCGCC	1 cut(s)	16
KpnI	GGTACC	1 cut(s)	228
Kzo9I	GATC	6 cut(s)	631, 1061, 1175, 1315, 1561, 1705
LmnI	GCTCC	8 cut(s)	73, 91, 115, 271, 503, 526, 1372, 1960
Lsp1109I	GCAGC	6 cut(s)	473, 733, 961, 1256, 1606, 1634
LweI	GCATC	4 cut(s)	212, 613, 689, 1478
MaeI	CTAG	5 cut(s)	467, 1364, 1383, 1566, 1857
MaeII	ACGT	2 cut(s)	824, 979
MaeIII	GTNAC	2 cut(s)	313, 1991
MalI	GATC	6 cut(s)	633, 1063, 1177, 1317, 1563, 1707
MboI	GATC	6 cut(s)	631, 1061, 1175, 1315, 1561, 1705
MboII	GAAGA	8 cut(s)	517, 520, 528, 531, 911, 1190, 1302, 1837
MflI	RGATCY	2 cut(s)	1061, 1175
MhlI	GDGCHC	3 cut(s)	359, 477, 546
MluCI	AATT	6 cut(s)	441, 579, 751, 983, 1002, 1085
Mly113I	GGCGCC	1 cut(s)	17
MlyI	GAGTC	4 cut(s)	190, 1516, 1672, 1766
MmeI	TCCRAC	4 cut(s)	293, 418, 584, 1024
MroXI	GAANNNNTTC	1 cut(s)	1089
MseI	TTAA	2 cut(s)	1320, 2014
MslI	CAYNNNNRTG	3 cut(s)	1119, 1340, 1737
MspA1I	CMGCKG	1 cut(s)	952
MspI	CCGG	8 cut(s)	14, 65, 200, 278, 564, 794, 1460, 1939
MvaI	CCWGG	5 cut(s)	685, 702, 989, 1728, 1844
MvnI	CGCG	2 cut(s)	182, 194
NarI	GGCGCC	1 cut(s)	17
NciI	CCSGG	5 cut(s)	279, 795, 1460, 1939, 1940
NcoI	CCATGG	1 cut(s)	1140
NdeII	GATC	6 cut(s)	631, 1061, 1175, 1315, 1561, 1705
NlaIII	CATG	7 cut(s)	641, 1057, 1124, 1144, 1205, 1331, 1609
NlaIV	GGNNCC	7 cut(s)	18, 69, 226, 283, 528, 748, 1063
NmuCI	GTSAC	1 cut(s)	313
OliI	CACNNNNGTG	1 cut(s)	1340
PaeR7I	CTCGAG	1 cut(s)	1524
PagI	TCATGA	1 cut(s)	1201
PaqCI	CACCTGC	1 cut(s)	634
PauI	GCGCGC	1 cut(s)	180
PceI	AGGCCT	2 cut(s)	1726, 1780
PcsI	WCGNNNNNNNCGW	3 cut(s)	344, 386, 404
PdmI	GAANNNNTTC	1 cut(s)	1089
PfeI	GAWTC	5 cut(s)	463, 810, 869, 1535, 1719
PflMI	CCANNNNNTGG	1 cut(s)	1146
PleI	GAGTC	4 cut(s)	190, 1516, 1671, 1766
PluTI	GGCGCC	1 cut(s)	20
PpsI	GAGTC	4 cut(s)	190, 1516, 1671, 1766
PpuMI	RGGWCCY	1 cut(s)	282
PshAI	GACNNNNGTC	1 cut(s)	1293
Psp5II	RGGWCCY	1 cut(s)	282
Psp6I	CCWGG	5 cut(s)	683, 700, 987, 1726, 1842
PspFI	CCCAGC	4 cut(s)	176, 247, 262, 1963
PspGI	CCWGG	5 cut(s)	683, 700, 987, 1726, 1842
PspN4I	GGNNCC	7 cut(s)	18, 69, 226, 283, 528, 748, 1063
PspPI	GGNCC	5 cut(s)	282, 566, 590, 1149, 1512
PspPPI	RGGWCCY	1 cut(s)	282
PspXI	VCTCGAGB	1 cut(s)	1524
PstI	CTGCAG	3 cut(s)	631, 1575, 1624
PstNI	CAGNNNCTG	1 cut(s)	764
PsuI	RGATCY	2 cut(s)	1061, 1175
PteI	GCGCGC	1 cut(s)	180
PvuII	CAGCTG	1 cut(s)	952
RsaI	GTAC	5 cut(s)	226, 1017, 1632, 1850, 1868
RsaNI	GTAC	5 cut(s)	225, 1016, 1631, 1849, 1867
RseI	CAYNNNNRTG	3 cut(s)	1119, 1340, 1737
SalI	GTCGAC	2 cut(s)	343, 379
SaqAI	TTAA	2 cut(s)	1320, 2014
Sau3AI	GATC	6 cut(s)	631, 1061, 1175, 1315, 1561, 1705
Sau96I	GGNCC	5 cut(s)	282, 566, 590, 1149, 1512
SchI	GAGTC	4 cut(s)	190, 1516, 1672, 1766
SduI	GDGCHC	3 cut(s)	359, 477, 546
SfaNI	GCATC	4 cut(s)	212, 613, 689, 1478
SfcI	CTRYAG	5 cut(s)	627, 675, 1571, 1620, 1744
SfoI	GGCGCC	1 cut(s)	18
Sfr274I	CTCGAG	1 cut(s)	1524
SgrDI	CGTCGACG	1 cut(s)	343
SinI	GGWCC	3 cut(s)	282, 590, 1149
SlaI	CTCGAG	1 cut(s)	1524
SmaI	CCCGGG	1 cut(s)	1940
SmiMI	CAYNNNNRTG	3 cut(s)	1119, 1340, 1737
SmlI	CTYRAG	2 cut(s)	1524, 1774
SmoI	CTYRAG	2 cut(s)	1524, 1774
Sse9I	AATT	6 cut(s)	441, 579, 751, 983, 1002, 1085
SseBI	AGGCCT	2 cut(s)	1726, 1780
SspDI	GGCGCC	1 cut(s)	16
SspMI	CTAG	5 cut(s)	467, 1364, 1383, 1566, 1857
StuI	AGGCCT	2 cut(s)	1726, 1780
StyI	CCWWGG	3 cut(s)	804, 880, 1140
TaaI	ACNGT	7 cut(s)	313, 390, 590, 1493, 1748, 1871, 1997
TaiI	ACGT	2 cut(s)	827, 982
TaqI	TCGA	4 cut(s)	344, 380, 1525, 1987
TasI	AATT	6 cut(s)	441, 579, 751, 983, 1002, 1085
TatI	WGTACW	2 cut(s)	1015, 1866
TfiI	GAWTC	5 cut(s)	463, 810, 869, 1535, 1719
Tru1I	TTAA	2 cut(s)	1320, 2014
Tru9I	TTAA	2 cut(s)	1320, 2014
TscAI	CASTG	5 cut(s)	739, 1744, 1876, 1927, 2002
TseFI	GTSAC	1 cut(s)	313
TseI	GCWGC	6 cut(s)	486, 721, 949, 1244, 1619, 1622
Tsp45I	GTSAC	1 cut(s)	313
TspDTI	ATGAA	5 cut(s)	1098, 1190, 1217, 1566, 1988
TspGWI	ACGGA	3 cut(s)	869, 1664, 1770
TspMI	CCCGGG	1 cut(s)	1938
TspRI	CASTG	5 cut(s)	739, 1744, 1876, 1927, 2002
Van91I	CCANNNNNTGG	1 cut(s)	1146
VpaK11BI	GGWCC	3 cut(s)	282, 590, 1149
XagI	CCTNNNNNAGG	1 cut(s)	884
XapI	RAATTY	3 cut(s)	579, 983, 1085
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1342, 1954
XhoI	CTCGAG	1 cut(s)	1524
XmaI	CCCGGG	1 cut(s)	1938
XmiI	GTMKAC	3 cut(s)	344, 380, 1743
XmnI	GAANNNNTTC	1 cut(s)	1089
XspI	CTAG	5 cut(s)	467, 1364, 1383, 1566, 1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.