Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001534.1

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Reverse (-)

39018 .. 44289

Gene Structure 5272 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001534.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

atgtcggcgccggccccgtccaccaccaactccacctcacctcctccccctccgccggccagcgctactgctcctaccactactccgccgccaaccaactccaccacgtcgccgccgaccaactccaccacatcgccgccacctccggcgtcgacatctagtacgccgcccatagcaaacttgccgtcgaacacgccggtcggggttatagtcggagttgcgataggagggttcagcgtacttgttgtagtggccattatcttctttgtctatcggagacggaagaacaggttggcgagagctaacgagtcaggtcaacaacccaaagatgaccaattaaaaggcccacctcaaaacttgcaacagaactatgctcctccttcagcagacaaagtagaaatgtttccaatgcccactgattcccgtaaaccatcttcaaccggtagtggctatggatcagataaaccgcccccagcctttggattttccgaaagcacatttacatatgaagaattagtcatggcaacaaatggtttctccaacgacaatcttcttggtcagggaggctttggttatgtccataaaggaattcttccaaatgggaaagtggttgcaattaaacagctgaaagctgggagtggacagggggagcgtgaattccaggcagaggttgaagtcattaatcgtgtccatcacagacatcttgtatcactggttggatactgcattagtggggcccagagattacttgtttatgagttcgtttccaacaacaccttggaatttcacttgcatggaaaggggcgaccaactatgacttggccaacaagaatgagaattgctctaggatctgcaaaaggattggcatatctccatgaggactgtcatcccaagatcatacaccgtgacatcaaggcggccaatattcttatagatgacaattttgaggcaaaggttgcagactttggacttgccaagttggccttagatacagatactcatgtctctacaagggttatgggaacttttggatacttagctcctgaatatgcatccagtggaaagctcagtgataagtcggatgtcttctcattcggagtcgtgctgttggagttgattaccggacgccaacccattgataaaactcattccttcactgatgatagcatggttgagtgggcaaggcctttgctcgcgcgagcattggaaaagggaaactttgatggtattgttgatgaaaggttgcagaatgattacaactccagtgaaatggcttgtatgattgcctgcgctgctgcttctgtgcgtcattctgcccgccgtcggccaaaaatgagccaggtagttcgagctttggagggcaatctttctccagatgaattaaatgaaggagttataccaggtcaaagtatgatatacagttcctctgaaagcacacaatacagcactcgtgaatacaaggaagacatgttgaaatttagaaagttagcactagaaagccaagagctagatcaaagaattagtgagaccagtgggcctagcagtgattttggccagcaccaatctgcctctagtggtgaaggccaacaaaccactcaagatatcgaacatgggcgaatgaacaaagacagccaagactatggtaaaagctcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

551

Amino Acids

59.68

Weight (kDa)

6.41

Isoelectric Point (pI)

44.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	7
AccB7I	CCANNNNNTGG	1 cut(s)	479
AccI	GTMKAC	1 cut(s)	152
AccII	CGCG	2 cut(s)	1196, 1198
AciI	CCGC	9 cut(s)	53, 86, 89, 113, 137, 167, 467, 917, 1318
AclWI	GGATC	2 cut(s)	463, 856
AcoI	YGGCCR	6 cut(s)	57, 252, 821, 918, 1325, 1552
AcsI	RAATTY	4 cut(s)	588, 656, 782, 1475
AcuI	CTGAAG	1 cut(s)	366
AcyI	GRCGYC	3 cut(s)	8, 149, 1126
AfaI	GTAC	2 cut(s)	163, 240
AfeI	AGCGCT	1 cut(s)	64
AfiI	CCNNNNNNNGG	4 cut(s)	55, 479, 667, 1323
AflIII	ACRYGT	1 cut(s)	1467
AgeI	ACCGGT	1 cut(s)	440
AgsI	TTSAA	3 cut(s)	438, 674, 1474
AjiI	CACGTC	1 cut(s)	108
AjnI	CCWGG	3 cut(s)	660, 1338, 1399
AjuI	GAANNNNNNNTTGG	2 cut(s)	275, 307
AluBI	AGCT	8 cut(s)	302, 625, 632, 1040, 1066, 1352, 1507, 1650
AluI	AGCT	8 cut(s)	302, 625, 632, 1040, 1066, 1352, 1507, 1650
Alw26I	GTCTC	3 cut(s)	271, 1009, 1520
AlwI	GGATC	2 cut(s)	463, 856
Aor51HI	AGCGCT	1 cut(s)	64
ApaI	GGGCCC	1 cut(s)	739
ApeKI	GCWGC	2 cut(s)	1292, 1295
ApoI	RAATTY	4 cut(s)	588, 656, 782, 1475
ArsI	GACNNNNNNTTYG	2 cut(s)	170, 202
AseI	ATTAAT	1 cut(s)	681
AsiGI	ACCGGT	1 cut(s)	440
Asp700I	GAANNNNTTC	1 cut(s)	402
AspLEI	GCGC	4 cut(s)	10, 65, 1198, 1292
AspS9I	GGNCC	5 cut(s)	13, 344, 735, 736, 1535
AsuHPI	GGTGA	2 cut(s)	30, 1589
BaeGI	GKGCMC	1 cut(s)	739
BaeI	ACNNNNGTAYC	2 cut(s)	987, 1020
BalI	TGGCCA	3 cut(s)	254, 823, 1554
BanI	GGYRCC	1 cut(s)	7
BanII	GRGCYC	1 cut(s)	739
BarI	GAAGNNNNNNTAC	4 cut(s)	418, 450, 1380, 1412
BauI	CACGAG	1 cut(s)	1449
BbsI	GAAGAC	2 cut(s)	1078, 1470
BbvI	GCAGC	2 cut(s)	1279, 1282
BccI	CCATC	3 cut(s)	439, 699, 1217
BceAI	ACGGC	2 cut(s)	169, 1305
BciT130I	CCWGG	3 cut(s)	662, 1340, 1401
BciVI	GTATCC	2 cut(s)	713, 1025
BcoDI	GTCTC	3 cut(s)	271, 1009, 1520
BfaI	CTAG	6 cut(s)	159, 845, 1493, 1508, 1539, 1572
BfoI	RGCGCY	2 cut(s)	11, 66
BfuI	GTATCC	2 cut(s)	713, 1025
BglI	GCCNNNNNGGC	1 cut(s)	980
BisI	GCNGC	7 cut(s)	89, 113, 137, 167, 918, 1293, 1296
BlsI	GCNGC	7 cut(s)	90, 114, 138, 168, 919, 1294, 1297
Bme1390I	CCNGG	3 cut(s)	662, 1340, 1401
BmgBI	CACGTC	1 cut(s)	108
BmgT120I	GGNCC	5 cut(s)	13, 344, 735, 736, 1535
BmiI	GGNNCC	4 cut(s)	9, 15, 736, 737
BmrFI	CCNGG	3 cut(s)	662, 1340, 1401
BmsI	GCATC	1 cut(s)	1061
BpiI	GAAGAC	2 cut(s)	1078, 1470
BplI	GAGNNNNNCTC	2 cut(s)	826, 858
BpmI	CTGGAG	2 cut(s)	1246, 1356
BpuEI	CTTGAG	1 cut(s)	1581
BsaHI	GRCGYC	3 cut(s)	8, 149, 1126
BsaI	GGTCTC	1 cut(s)	1520
BsaJI	CCNNGG	1 cut(s)	777
BsaWI	WCCGGW	2 cut(s)	440, 1121
BsaXI	ACNNNNNCTCC	4 cut(s)	25, 55, 67, 97
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 479, 667, 1323
Bse118I	RCCGGY	4 cut(s)	10, 55, 196, 440
Bse1I	ACTGG	4 cut(s)	717, 1056, 1263, 1530
BseBI	CCWGG	3 cut(s)	662, 1340, 1401
BseDI	CCNNGG	1 cut(s)	777
BseGI	GGATG	3 cut(s)	886, 1052, 1087
BseLI	CCNNNNNNNGG	4 cut(s)	55, 479, 667, 1323
BseMII	CTCAG	1 cut(s)	1081
BseNI	ACTGG	4 cut(s)	717, 1056, 1263, 1530
BseRI	GAGGAG	2 cut(s)	33, 366
BseSI	GKGCMC	1 cut(s)	739
BseXI	GCAGC	2 cut(s)	1279, 1282
BseYI	CCCAGC	2 cut(s)	472, 632
Bsh1236I	CGCG	2 cut(s)	1196, 1198
Bsh1285I	CGRYCG	1 cut(s)	201
BshNI	GGYRCC	1 cut(s)	7
BshTI	ACCGGT	1 cut(s)	440
BsiEI	CGRYCG	1 cut(s)	201
BsiSI	CCGG	6 cut(s)	11, 56, 146, 197, 441, 1122
BslI	CCNNNNNNNGG	4 cut(s)	55, 479, 667, 1323
BsmAI	GTCTC	3 cut(s)	271, 1009, 1520
BsmBI	CGTCTC	1 cut(s)	271
Bso31I	GGTCTC	1 cut(s)	1520
Bsp120I	GGGCCC	1 cut(s)	735
Bsp1286I	GDGCHC	1 cut(s)	739
Bsp143I	GATC	4 cut(s)	455, 848, 894, 1510
BspACI	CCGC	9 cut(s)	53, 86, 89, 113, 137, 167, 467, 917, 1318
BspCNI	CTCAG	1 cut(s)	1080
BspFNI	CGCG	2 cut(s)	1196, 1198
BspLI	GGNNCC	4 cut(s)	9, 15, 736, 737
BspPI	GGATC	2 cut(s)	463, 856
BspT107I	GGYRCC	1 cut(s)	7
BspTNI	GGTCTC	1 cut(s)	1520
BsrFI	RCCGGY	4 cut(s)	10, 55, 196, 440
BsrI	ACTGG	4 cut(s)	717, 1056, 1263, 1530
BssAI	RCCGGY	4 cut(s)	10, 55, 196, 440
BssECI	CCNNGG	1 cut(s)	777
BssMI	GATC	4 cut(s)	455, 848, 894, 1510
BssNI	GRCGYC	3 cut(s)	8, 149, 1126
BssSI	CACGAG	1 cut(s)	1449
BssT1I	CCWWGG	1 cut(s)	777
Bst2BI	CACGAG	1 cut(s)	1449
Bst2UI	CCWGG	3 cut(s)	662, 1340, 1401
Bst4CI	ACNGT	3 cut(s)	884, 905, 1421
BstACI	GRCGYC	3 cut(s)	8, 149, 1126
BstAPI	GCANNNNNTGC	1 cut(s)	956
BstC8I	GCNNGC	8 cut(s)	12, 57, 61, 1194, 1200, 1288, 1318, 1556
BstDEI	CTNAG	3 cut(s)	985, 1036, 1067
BstF5I	GGATG	3 cut(s)	886, 1052, 1087
BstFNI	CGCG	2 cut(s)	1196, 1198
BstH2I	RGCGCY	2 cut(s)	11, 66
BstHHI	GCGC	4 cut(s)	10, 65, 1198, 1292
BstKTI	GATC	4 cut(s)	458, 851, 897, 1513
BstMAI	GTCTC	3 cut(s)	271, 1009, 1520
BstMBI	GATC	4 cut(s)	455, 848, 894, 1510
BstMCI	CGRYCG	1 cut(s)	201
BstMWI	GCNNNNNNNGC	3 cut(s)	956, 980, 1292
BstNI	CCWGG	3 cut(s)	662, 1340, 1401
BstNSI	RCATGY	1 cut(s)	1471
BstSCI	CCNGG	3 cut(s)	660, 1338, 1399
BstSLI	GKGCMC	1 cut(s)	739
BstUI	CGCG	2 cut(s)	1196, 1198
BstV1I	GCAGC	2 cut(s)	1279, 1282
BstV2I	GAAGAC	2 cut(s)	1078, 1470
BstX2I	RGATCY	1 cut(s)	848
BstXI	CCANNNNNNTGG	2 cut(s)	1270, 1640
BstYI	RGATCY	1 cut(s)	848
BsuI	GTATCC	2 cut(s)	713, 1025
BtgZI	GCGATG	1 cut(s)	117
BtrI	CACGTC	1 cut(s)	108
BtsCI	GGATG	3 cut(s)	886, 1052, 1087
BtsI	GCAGTG	1 cut(s)	1549
BtsIMutI	CAGTG	8 cut(s)	414, 710, 1063, 1075, 1155, 1270, 1537, 1549
Cac8I	GCNNGC	8 cut(s)	12, 57, 61, 1194, 1200, 1288, 1318, 1556
CfoI	GCGC	4 cut(s)	10, 65, 1198, 1292
Cfr10I	RCCGGY	4 cut(s)	10, 55, 196, 440
Cfr13I	GGNCC	5 cut(s)	13, 344, 735, 736, 1535
CseI	GACGC	3 cut(s)	138, 1134, 1295
CsiI	ACCWGGT	1 cut(s)	1399
Csp6I	GTAC	2 cut(s)	162, 239
CspAI	ACCGGT	1 cut(s)	440
CviAII	CATG	7 cut(s)	520, 794, 875, 1001, 1168, 1468, 1610
CviQI	GTAC	2 cut(s)	162, 239
DdeI	CTNAG	3 cut(s)	985, 1036, 1067
DinI	GGCGCC	1 cut(s)	9
DpnI	GATC	4 cut(s)	457, 850, 896, 1512
DpnII	GATC	4 cut(s)	455, 848, 894, 1510
EaeI	YGGCCR	6 cut(s)	57, 252, 821, 918, 1325, 1552
EciI	GGCGGA	2 cut(s)	42, 75
Eco130I	CCWWGG	1 cut(s)	777
Eco147I	AGGCCT	1 cut(s)	1186
Eco24I	GRGCYC	1 cut(s)	739
Eco31I	GGTCTC	1 cut(s)	1520
Eco32I	GATATC	1 cut(s)	1603
Eco47III	AGCGCT	1 cut(s)	64
Eco57I	CTGAAG	1 cut(s)	366
EcoO109I	RGGNCCY	1 cut(s)	735
EcoRI	GAATTC	2 cut(s)	588, 656
EcoRII	CCWGG	3 cut(s)	660, 1338, 1399
EcoRV	GATATC	1 cut(s)	1603
EcoT14I	CCWWGG	1 cut(s)	777
EcoT22I	ATGCAT	1 cut(s)	1054
EcoT38I	GRGCYC	1 cut(s)	739
EgeI	GGCGCC	1 cut(s)	9
EheI	GGCGCC	1 cut(s)	9
ErhI	CCWWGG	1 cut(s)	777
Esp3I	CGTCTC	1 cut(s)	271
FaeI	CATG	7 cut(s)	523, 797, 878, 1004, 1171, 1471, 1613
FalI	AAGNNNNNCTT	6 cut(s)	576, 608, 968, 1000, 1202, 1234
FatI	CATG	7 cut(s)	519, 793, 874, 1000, 1167, 1467, 1609
FauI	CCCGC	1 cut(s)	1325
FauNDI	CATATG	1 cut(s)	505
FblI	GTMKAC	1 cut(s)	152
Fnu4HI	GCNGC	7 cut(s)	89, 113, 137, 167, 918, 1293, 1296
FokI	GGATG	3 cut(s)	873, 1039, 1094
FriOI	GRGCYC	1 cut(s)	739
Fsp4HI	GCNGC	7 cut(s)	89, 113, 137, 167, 918, 1293, 1296
FspBI	CTAG	6 cut(s)	159, 845, 1493, 1508, 1539, 1572
GlaI	GCGC	4 cut(s)	9, 64, 1197, 1291
GluI	GCNGC	7 cut(s)	89, 113, 137, 167, 918, 1293, 1296
GsaI	CCCAGC	2 cut(s)	476, 636
GsuI	CTGGAG	2 cut(s)	1246, 1356
HaeII	RGCGCY	2 cut(s)	11, 66
HapII	CCGG	6 cut(s)	11, 56, 146, 197, 441, 1122
HgaI	GACGC	3 cut(s)	138, 1134, 1295
HhaI	GCGC	4 cut(s)	10, 65, 1198, 1292
Hin1I	GRCGYC	3 cut(s)	8, 149, 1126
Hin1II	CATG	7 cut(s)	523, 797, 878, 1004, 1171, 1471, 1613
Hin6I	GCGC	4 cut(s)	8, 63, 1196, 1290
HinP1I	GCGC	4 cut(s)	8, 63, 1196, 1290
HincII	GTYRAC	2 cut(s)	153, 317
HindII	GTYRAC	2 cut(s)	153, 317
HinfI	GANTC	3 cut(s)	308, 419, 1098
HpaII	CCGG	6 cut(s)	11, 56, 146, 197, 441, 1122
HphI	GGTGA	2 cut(s)	30, 1589
Hpy166II	GTNNAC	5 cut(s)	21, 153, 317, 428, 641
Hpy188I	TCNGA	7 cut(s)	215, 276, 460, 490, 1081, 1097, 1429
Hpy188III	TCNNGA	5 cut(s)	1043, 1373, 1451, 1598, 1653
Hpy8I	GTNNAC	5 cut(s)	21, 153, 317, 428, 641
Hpy99I	CGWCG	4 cut(s)	112, 154, 190, 1326
HpyAV	CCTTC	4 cut(s)	390, 1162, 1382, 1574
HpyCH4III	ACNGT	3 cut(s)	884, 905, 1421
HpyCH4IV	ACGT	1 cut(s)	107
HpyCH4V	TGCA	8 cut(s)	361, 614, 726, 793, 854, 959, 1052, 1246
HpyF10VI	GCNNNNNNNGC	3 cut(s)	956, 980, 1292
HpyF3I	CTNAG	3 cut(s)	985, 1036, 1067
HpySE526I	ACGT	1 cut(s)	107
Hsp92I	GRCGYC	3 cut(s)	8, 149, 1126
Hsp92II	CATG	7 cut(s)	523, 797, 878, 1004, 1171, 1471, 1613
HspAI	GCGC	4 cut(s)	8, 63, 1196, 1290
KasI	GGCGCC	1 cut(s)	7
KroI	GCCGGC	2 cut(s)	10, 55
KroNI	GCCGGC	2 cut(s)	12, 57
Kzo9I	GATC	4 cut(s)	455, 848, 894, 1510
LmnI	GCTCC	4 cut(s)	76, 379, 649, 1045
Lsp1109I	GCAGC	2 cut(s)	1279, 1282
LweI	GCATC	1 cut(s)	1061
MabI	ACCWGGT	1 cut(s)	1399
MaeI	CTAG	6 cut(s)	159, 845, 1493, 1508, 1539, 1572
MaeII	ACGT	1 cut(s)	107
MaeIII	GTNAC	1 cut(s)	905
MalI	GATC	4 cut(s)	457, 850, 896, 1512
MboI	GATC	4 cut(s)	455, 848, 894, 1510
MboII	GAAGA	8 cut(s)	253, 295, 426, 521, 542, 584, 1078, 1475
MflI	RGATCY	1 cut(s)	848
MhlI	GDGCHC	1 cut(s)	739
MlsI	TGGCCA	3 cut(s)	254, 823, 1554
MluNI	TGGCCA	3 cut(s)	254, 823, 1554
Mly113I	GGCGCC	1 cut(s)	8
MlyI	GAGTC	2 cut(s)	317, 1107
MmeI	TCCRAC	6 cut(s)	193, 564, 697, 792, 1059, 1089
Mox20I	TGGCCA	3 cut(s)	254, 823, 1554
Mph1103I	ATGCAT	1 cut(s)	1054
MroNI	GCCGGC	2 cut(s)	10, 55
MroXI	GAANNNNTTC	1 cut(s)	402
MscI	TGGCCA	3 cut(s)	254, 823, 1554
MseI	TTAA	4 cut(s)	338, 618, 681, 1382
MslI	CAYNNNNRTG	1 cut(s)	792
Msp20I	TGGCCA	3 cut(s)	254, 823, 1554
MspA1I	CMGCKG	1 cut(s)	625
MspI	CCGG	6 cut(s)	11, 56, 146, 197, 441, 1122
MspR9I	CCNGG	3 cut(s)	662, 1340, 1401
MvaI	CCWGG	3 cut(s)	662, 1340, 1401
MvnI	CGCG	2 cut(s)	1196, 1198
MwoI	GCNNNNNNNGC	3 cut(s)	956, 980, 1292
NaeI	GCCGGC	2 cut(s)	12, 57
NarI	GGCGCC	1 cut(s)	8
NdeI	CATATG	1 cut(s)	505
NdeII	GATC	4 cut(s)	455, 848, 894, 1510
NgoMIV	GCCGGC	2 cut(s)	10, 55
NlaIII	CATG	7 cut(s)	523, 797, 878, 1004, 1171, 1471, 1613
NlaIV	GGNNCC	4 cut(s)	9, 15, 736, 737
NmuCI	GTSAC	1 cut(s)	905
NsiI	ATGCAT	1 cut(s)	1054
NspI	RCATGY	1 cut(s)	1471
PceI	AGGCCT	1 cut(s)	1186
PciI	ACATGT	1 cut(s)	1467
PcsI	WCGNNNNNNNCGW	1 cut(s)	113
PdiI	GCCGGC	2 cut(s)	12, 57
PdmI	GAANNNNTTC	1 cut(s)	402
PfeI	GAWTC	1 cut(s)	419
PflMI	CCANNNNNTGG	1 cut(s)	479
PinAI	ACCGGT	1 cut(s)	440
PkrI	GCNGC	7 cut(s)	90, 114, 138, 168, 919, 1294, 1297
PleI	GAGTC	2 cut(s)	316, 1106
PluTI	GGCGCC	1 cut(s)	11
PpsI	GAGTC	2 cut(s)	316, 1106
PscI	ACATGT	1 cut(s)	1467
PshBI	ATTAAT	1 cut(s)	681
Psp6I	CCWGG	3 cut(s)	660, 1338, 1399
PspFI	CCCAGC	2 cut(s)	472, 632
PspGI	CCWGG	3 cut(s)	660, 1338, 1399
PspN4I	GGNNCC	4 cut(s)	9, 15, 736, 737
PspOMI	GGGCCC	1 cut(s)	735
PspPI	GGNCC	5 cut(s)	13, 344, 735, 736, 1535
PsuI	RGATCY	1 cut(s)	848
PvuII	CAGCTG	1 cut(s)	625
RsaI	GTAC	2 cut(s)	163, 240
RsaNI	GTAC	2 cut(s)	162, 239
RseI	CAYNNNNRTG	1 cut(s)	792
SalI	GTCGAC	1 cut(s)	151
SaqAI	TTAA	4 cut(s)	338, 618, 681, 1382
SatI	GCNGC	7 cut(s)	89, 113, 137, 167, 918, 1293, 1296
Sau3AI	GATC	4 cut(s)	455, 848, 894, 1510
Sau96I	GGNCC	5 cut(s)	13, 344, 735, 736, 1535
SchI	GAGTC	2 cut(s)	317, 1107
ScrFI	CCNGG	3 cut(s)	662, 1340, 1401
SduI	GDGCHC	1 cut(s)	739
SexAI	ACCWGGT	1 cut(s)	1399
SfaNI	GCATC	1 cut(s)	1061
SfoI	GGCGCC	1 cut(s)	9
SmiMI	CAYNNNNRTG	1 cut(s)	792
SmlI	CTYRAG	1 cut(s)	1596
SmoI	CTYRAG	1 cut(s)	1596
SseBI	AGGCCT	1 cut(s)	1186
SsiI	CCGC	9 cut(s)	53, 86, 89, 113, 137, 167, 467, 917, 1318
SspDI	GGCGCC	1 cut(s)	7
SspI	AATATT	1 cut(s)	925
SspMI	CTAG	6 cut(s)	159, 845, 1493, 1508, 1539, 1572
StuI	AGGCCT	1 cut(s)	1186
StyD4I	CCNGG	3 cut(s)	660, 1338, 1399
StyI	CCWWGG	1 cut(s)	777
TaaI	ACNGT	3 cut(s)	884, 905, 1421
TaiI	ACGT	1 cut(s)	110
TaqI	TCGA	4 cut(s)	152, 188, 1348, 1605
TauI	GCSGC	5 cut(s)	91, 115, 139, 169, 920
TfiI	GAWTC	1 cut(s)	419
Tru1I	TTAA	4 cut(s)	338, 618, 681, 1382
Tru9I	TTAA	4 cut(s)	338, 618, 681, 1382
TscAI	CASTG	8 cut(s)	421, 717, 1063, 1075, 1162, 1270, 1537, 1549
TseFI	GTSAC	1 cut(s)	905
TseI	GCWGC	2 cut(s)	1292, 1295
Tsp45I	GTSAC	1 cut(s)	905
TspDTI	ATGAA	5 cut(s)	522, 1251, 1392, 1401, 1634
TspGWI	ACGGA	1 cut(s)	295
TspRI	CASTG	8 cut(s)	421, 717, 1063, 1075, 1162, 1270, 1537, 1549
Van91I	CCANNNNNTGG	1 cut(s)	479
VspI	ATTAAT	1 cut(s)	681
XapI	RAATTY	4 cut(s)	588, 656, 782, 1475
XceI	RCATGY	1 cut(s)	1471
XcmI	CCANNNNNNNNNTGG	2 cut(s)	775, 816
XmiI	GTMKAC	1 cut(s)	152
XmnI	GAANNNNTTC	1 cut(s)	402
XspI	CTAG	6 cut(s)	159, 845, 1493, 1508, 1539, 1572
Zsp2I	ATGCAT	1 cut(s)	1054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.