Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Forward (+)

88607673 .. 88611593

Gene Structure 3921 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00151310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGCCTAAGCCACCTCCTGCACAAGCTGTAGCATCCAGGCCACCGCACTCGCCAGGATATACACCACCACCGCAGCCATACAGCAGTGGAGGTTCTGGTTCCAATTATTCAGGGTCTGAAACTCCACTCCCACCACCTCCACCACCGGGGTATTCCTTGGGATTCTCTAAAAGCACATTTACTTATGAGGAACTGGCTTTGGCAACAGAAGGGTTCTCGGATTCTAATCTCCTTGGACAGGGTGGGTTTGGATATGTTCACAAAGGAGTTCTTCCCAATGGGAAGGAAGTAGCGGTCAAGCAGCTGAAGGCTGGAAGTGGGCAAGGGGAACGTGAATTCCAGGCAGAAGTTGAAATTATTAGCCGTGTACATCACAGACATCTGGTTTCGCTGGTTGGATACTGCATGACTGGATCCGAGAGACTACTTGTCTATGAATTTGTTCCAAATAACACTATGGAGTTCCACTTACATGGAAAGGGGAGACCTACCATGGATTGGTCCACAAGACTGAAAATCGCTTTAGGATCTGCAAAAGGACTGGCATATCTTCATGAGGATTGTCATCCTAAAATCATTCATCGTGATATCAAAGCAGCTAATATACTTTTGGATTTCAAGTTTGAGTGCAAGGTTGCAGACTTTGGTCTTGCCAAGCTTTCTTCTGATCTTAATACTCATGTTTCCACCCGAGTGATGGGGACTTTTGGGTATCTAGCTCCAGAATATGCTTCTAGTGGAAAACTCACAGACAAGTCAGATGTTTTCTCGTTCGGGGTTATGCTTTTGGAGTTGATTACTGGACGCCGCCCAGTTGACGCATCTCATACGTACATAGAGGACAGTTTGGTAGAGTGGGCAAGGCCCGTTCTGACTCGAGCTTTGGAATCAGATGACTTTGATGAACTGGTTGATCCTAGACTGCAGAATAGTTTTGACCACAATGAGATGGCTCGCATGGTTGCTTGTGCTGCAGCTTGTGTACGACATTCTGCAAGGCGTCGACCACGAATGAGTCAGGTTGTCCGTGCTTTAGAGGGAGATGTTTCTCTGTCTGATCTGAACGAAGGAATCAGGCCTGGTCATAGCAGTGTCTACAGTTCCCATGGAAGCTCAGACTATGACTCAAGGCCTTATGACACAAAGCAACGCAATCTGGATATGATAAACCACAGGAAGTTGGCATTGGAAAGCCAGGAGTACGGCGCTAGTAGCGAGTACAGTGGTGGTCGCACCACCAGTGAGTATGGTCTGAACCCATCTGGTTCAAGCAGTGAAGGCCAACGAACCCGGGAAACCACCAGAGAAATGGAGCTGGGAAAGATGAATAAGAACAATAGAGGTTACAGTGGAAGCTCCGAGTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

455

Amino Acids

49.99

Weight (kDa)

6.5

Isoelectric Point (pI)

46.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	74 - 278	1.4e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	76 - 345	3.2e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	498
AccI	GTMKAC	2 cut(s)	1003, 1095
AciI	CCGC	4 cut(s)	44, 71, 293, 808
AclWI	GGATC	4 cut(s)	408, 421, 535, 908
AcsI	RAATTY	2 cut(s)	335, 437
AcuI	CTGAAG	1 cut(s)	326
AcyI	GRCGYC	2 cut(s)	805, 1000
AfaI	GTAC	5 cut(s)	369, 833, 984, 1202, 1220
AfiI	CCNNNNNNNGG	4 cut(s)	146, 238, 498, 697
AgsI	TTSAA	3 cut(s)	353, 619, 1269
AhdI	GACNNNNNGTC	1 cut(s)	428
AjnI	CCWGG	5 cut(s)	35, 52, 339, 1078, 1194
AjuI	GAANNNNNNNTTGG	2 cut(s)	1169, 1201
AleI	CACNNNNGTG	1 cut(s)	692
AloI	GAACNNNNNNTCC	2 cut(s)	321, 353
Alw26I	GTCTC	2 cut(s)	415, 478
AlwI	GGATC	4 cut(s)	408, 421, 535, 908
AlwNI	CAGNNNCTG	1 cut(s)	116
Ama87I	CYCGRG	3 cut(s)	690, 876, 1290
AoxI	GGCC	5 cut(s)	38, 863, 1076, 1130, 1279
ApeKI	GCWGC	5 cut(s)	73, 301, 596, 971, 974
ApoI	RAATTY	2 cut(s)	335, 437
ArsI	GACNNNNNNTTYG	2 cut(s)	865, 897
Asp700I	GAANNNNTTC	1 cut(s)	441
AspLEI	GCGC	1 cut(s)	1208
AspS9I	GGNCC	2 cut(s)	501, 864
AsuC2I	CCSGG	3 cut(s)	147, 1291, 1292
AvaI	CYCGRG	3 cut(s)	690, 876, 1290
AvaII	GGWCC	1 cut(s)	501
BamHI	GGATCC	1 cut(s)	413
BbvI	GCAGC	5 cut(s)	85, 313, 608, 958, 986
BccI	CCATC	3 cut(s)	691, 943, 1267
BceAI	ACGGC	2 cut(s)	348, 1219
BciT130I	CCWGG	5 cut(s)	37, 54, 341, 1080, 1196
BciVI	GTATCC	1 cut(s)	392
BcnI	CCSGG	3 cut(s)	147, 1291, 1292
BcoDI	GTCTC	2 cut(s)	415, 478
BfaI	CTAG	4 cut(s)	716, 735, 918, 1209
BfmI	CTRYAG	4 cut(s)	27, 923, 972, 1096
BfoI	RGCGCY	1 cut(s)	1209
BfuI	GTATCC	1 cut(s)	392
BisI	GCNGC	6 cut(s)	74, 302, 597, 808, 972, 975
BlsI	GCNGC	6 cut(s)	75, 303, 598, 809, 973, 976
Bme1390I	CCNGG	8 cut(s)	37, 54, 147, 341, 1080, 1196, 1291, 1292
Bme18I	GGWCC	1 cut(s)	501
BmeRI	GACNNNNNGTC	1 cut(s)	428
BmeT110I	CYCGRG	3 cut(s)	690, 876, 1290
BmgT120I	GGNCC	2 cut(s)	501, 864
BmiI	GGNNCC	2 cut(s)	100, 415
BmrFI	CCNGG	8 cut(s)	37, 54, 147, 341, 1080, 1196, 1291, 1292
BmrI	ACTGGG	1 cut(s)	806
BmsI	GCATC	2 cut(s)	41, 830
BmuI	ACTGGG	1 cut(s)	806
BoxI	GACNNNNGTC	1 cut(s)	645
BpmI	CTGGAG	1 cut(s)	705
Bpu10I	CCTNAGC	1 cut(s)	6
BpuEI	CTTGAG	1 cut(s)	1111
BpuMI	CCSGG	3 cut(s)	147, 1291, 1292
BsaAI	YACGTR	1 cut(s)	831
BsaBI	GATNNNNATC	2 cut(s)	225, 564
BsaHI	GRCGYC	2 cut(s)	805, 1000
BsaI	GGTCTC	1 cut(s)	478
BsaJI	CCNNGG	6 cut(s)	146, 156, 232, 492, 1105, 1290
Bsc4I	CCNNNNNNNGG	4 cut(s)	146, 238, 498, 697
Bse1I	ACTGG	7 cut(s)	198, 415, 546, 805, 812, 912, 1239
Bse8I	GATNNNNATC	2 cut(s)	225, 564
BseBI	CCWGG	5 cut(s)	37, 54, 341, 1080, 1196
BseDI	CCNNGG	6 cut(s)	146, 156, 232, 492, 1105, 1290
BseGI	GGATG	2 cut(s)	32, 565
BseJI	GATNNNNATC	2 cut(s)	225, 564
BseLI	CCNNNNNNNGG	4 cut(s)	146, 238, 498, 697
BseMII	CTCAG	1 cut(s)	1128
BseNI	ACTGG	7 cut(s)	198, 415, 546, 805, 812, 912, 1239
BseXI	GCAGC	5 cut(s)	85, 313, 608, 958, 986
BseYI	CCCAGC	1 cut(s)	1315
BshFI	GGCC	5 cut(s)	40, 865, 1078, 1132, 1281
BsiHKCI	CYCGRG	3 cut(s)	690, 876, 1290
BsiSI	CCGG	2 cut(s)	146, 1291
BslFI	GGGAC	1 cut(s)	715
BslI	CCNNNNNNNGG	4 cut(s)	146, 238, 498, 697
BsmAI	GTCTC	2 cut(s)	415, 478
BsmFI	GGGAC	1 cut(s)	715
BsnI	GGCC	5 cut(s)	40, 865, 1078, 1132, 1281
Bso31I	GGTCTC	1 cut(s)	478
BsoBI	CYCGRG	3 cut(s)	690, 876, 1290
Bsp1407I	TGTACA	1 cut(s)	367
Bsp143I	GATC	5 cut(s)	413, 527, 667, 913, 1057
Bsp19I	CCATGG	2 cut(s)	492, 1105
BspACI	CCGC	4 cut(s)	44, 71, 293, 808
BspANI	GGCC	5 cut(s)	40, 865, 1078, 1132, 1281
BspCNI	CTCAG	1 cut(s)	1127
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	2 cut(s)	100, 415
BspMAI	CTGCAG	2 cut(s)	927, 976
BspPI	GGATC	4 cut(s)	408, 421, 535, 908
BspTNI	GGTCTC	1 cut(s)	478
BsrGI	TGTACA	1 cut(s)	367
BsrI	ACTGG	7 cut(s)	198, 415, 546, 805, 812, 912, 1239
BssECI	CCNNGG	6 cut(s)	146, 156, 232, 492, 1105, 1290
BssMI	GATC	5 cut(s)	413, 527, 667, 913, 1057
BssNI	GRCGYC	2 cut(s)	805, 1000
BssT1I	CCWWGG	4 cut(s)	156, 232, 492, 1105
Bst2UI	CCWGG	5 cut(s)	37, 54, 341, 1080, 1196
Bst4CI	ACNGT	4 cut(s)	845, 1100, 1223, 1349
BstACI	GRCGYC	2 cut(s)	805, 1000
BstAUI	TGTACA	1 cut(s)	367
BstBAI	YACGTR	1 cut(s)	831
BstC8I	GCNNGC	1 cut(s)	955
BstDEI	CTNAG	2 cut(s)	6, 1114
BstDSI	CCRYGG	2 cut(s)	492, 1105
BstENI	CCTNNNNNAGG	1 cut(s)	236
BstF5I	GGATG	2 cut(s)	32, 565
BstH2I	RGCGCY	1 cut(s)	1209
BstHHI	GCGC	1 cut(s)	1208
BstKTI	GATC	5 cut(s)	416, 530, 670, 916, 1060
BstMAI	GTCTC	2 cut(s)	415, 478
BstMBI	GATC	5 cut(s)	413, 527, 667, 913, 1057
BstMWI	GCNNNNNNNGC	3 cut(s)	971, 1212, 1278
BstNI	CCWGG	5 cut(s)	37, 54, 341, 1080, 1196
BstPAI	GACNNNNGTC	1 cut(s)	645
BstSCI	CCNGG	8 cut(s)	35, 52, 145, 339, 1078, 1194, 1289, 1290
BstSFI	CTRYAG	4 cut(s)	27, 923, 972, 1096
BstSNI	TACGTA	1 cut(s)	831
BstV1I	GCAGC	5 cut(s)	85, 313, 608, 958, 986
BstX2I	RGATCY	2 cut(s)	413, 527
BstXI	CCANNNNNNTGG	2 cut(s)	473, 1309
BstYI	RGATCY	2 cut(s)	413, 527
BsuI	GTATCC	1 cut(s)	392
BsuRI	GGCC	5 cut(s)	40, 865, 1078, 1132, 1281
BtgI	CCRYGG	2 cut(s)	492, 1105
BtsCI	GGATG	2 cut(s)	32, 565
BtsI	GCAGTG	3 cut(s)	91, 1096, 1279
BtsIMutI	CAGTG	6 cut(s)	91, 1096, 1228, 1246, 1279, 1354
Cac8I	GCNNGC	1 cut(s)	955
CaiI	CAGNNNCTG	1 cut(s)	116
CciI	TCATGA	1 cut(s)	553
CfoI	GCGC	1 cut(s)	1208
Cfr13I	GGNCC	2 cut(s)	501, 864
Cfr9I	CCCGGG	1 cut(s)	1290
CseI	GACGC	3 cut(s)	813, 827, 989
Csp6I	GTAC	5 cut(s)	368, 832, 983, 1201, 1219
CviAII	CATG	7 cut(s)	406, 473, 493, 554, 680, 958, 1106
CviQI	GTAC	5 cut(s)	368, 832, 983, 1201, 1219
DdeI	CTNAG	2 cut(s)	6, 1114
DpnI	GATC	5 cut(s)	415, 529, 669, 915, 1059
DpnII	GATC	5 cut(s)	413, 527, 667, 913, 1057
DriI	GACNNNNNGTC	1 cut(s)	428
Eam1105I	GACNNNNNGTC	1 cut(s)	428
Eco105I	TACGTA	1 cut(s)	831
Eco130I	CCWWGG	4 cut(s)	156, 232, 492, 1105
Eco147I	AGGCCT	2 cut(s)	1078, 1132
Eco31I	GGTCTC	1 cut(s)	478
Eco32I	GATATC	1 cut(s)	589
Eco47I	GGWCC	1 cut(s)	501
Eco57I	CTGAAG	1 cut(s)	326
Eco88I	CYCGRG	3 cut(s)	690, 876, 1290
EcoNI	CCTNNNNNAGG	1 cut(s)	236
EcoRI	GAATTC	1 cut(s)	335
EcoRII	CCWGG	5 cut(s)	35, 52, 339, 1078, 1194
EcoRV	GATATC	1 cut(s)	589
EcoT14I	CCWWGG	4 cut(s)	156, 232, 492, 1105
ErhI	CCWWGG	4 cut(s)	156, 232, 492, 1105
FaeI	CATG	7 cut(s)	409, 476, 496, 557, 683, 961, 1109
FalI	AAGNNNNNCTT	2 cut(s)	255, 287
FaqI	GGGAC	1 cut(s)	715
FatI	CATG	7 cut(s)	405, 472, 492, 553, 679, 957, 1105
FblI	GTMKAC	2 cut(s)	1003, 1095
Fnu4HI	GCNGC	6 cut(s)	74, 302, 597, 808, 972, 975
FokI	GGATG	2 cut(s)	19, 552
Fsp4HI	GCNGC	6 cut(s)	74, 302, 597, 808, 972, 975
FspBI	CTAG	4 cut(s)	716, 735, 918, 1209
GlaI	GCGC	1 cut(s)	1207
GluI	GCNGC	6 cut(s)	74, 302, 597, 808, 972, 975
GsaI	CCCAGC	1 cut(s)	1319
GsuI	CTGGAG	1 cut(s)	705
HaeII	RGCGCY	1 cut(s)	1209
HaeIII	GGCC	5 cut(s)	40, 865, 1078, 1132, 1281
HapII	CCGG	2 cut(s)	146, 1291
HgaI	GACGC	3 cut(s)	813, 827, 989
HhaI	GCGC	1 cut(s)	1208
Hin1I	GRCGYC	2 cut(s)	805, 1000
Hin1II	CATG	7 cut(s)	409, 476, 496, 557, 683, 961, 1109
Hin6I	GCGC	1 cut(s)	1206
HinP1I	GCGC	1 cut(s)	1206
HincII	GTYRAC	2 cut(s)	817, 1004
HindII	GTYRAC	2 cut(s)	817, 1004
HindIII	AAGCTT	1 cut(s)	656
HinfI	GANTC	7 cut(s)	162, 221, 874, 887, 1015, 1071, 1124
HpaII	CCGG	2 cut(s)	146, 1291
Hpy166II	GTNNAC	7 cut(s)	259, 368, 504, 817, 983, 1004, 1096
Hpy188III	TCNNGA	4 cut(s)	554, 584, 722, 1157
Hpy8I	GTNNAC	7 cut(s)	259, 368, 504, 817, 983, 1004, 1096
Hpy99I	CGWCG	1 cut(s)	1005
HpyAV	CCTTC	5 cut(s)	203, 277, 301, 1061, 1271
HpyCH4III	ACNGT	4 cut(s)	845, 1100, 1223, 1349
HpyCH4IV	ACGT	2 cut(s)	331, 830
HpyCH4V	TGCA	8 cut(s)	20, 405, 533, 630, 638, 925, 974, 995
HpyF10VI	GCNNNNNNNGC	3 cut(s)	971, 1212, 1278
HpyF3I	CTNAG	2 cut(s)	6, 1114
HpySE526I	ACGT	2 cut(s)	331, 830
Hsp92I	GRCGYC	2 cut(s)	805, 1000
Hsp92II	CATG	7 cut(s)	409, 476, 496, 557, 683, 961, 1109
HspAI	GCGC	1 cut(s)	1206
Kzo9I	GATC	5 cut(s)	413, 527, 667, 913, 1057
LmnI	GCTCC	3 cut(s)	724, 1312, 1361
Lsp1109I	GCAGC	5 cut(s)	85, 313, 608, 958, 986
LweI	GCATC	2 cut(s)	41, 830
MaeI	CTAG	4 cut(s)	716, 735, 918, 1209
MaeII	ACGT	2 cut(s)	331, 830
MaeIII	GTNAC	1 cut(s)	1343
MalI	GATC	5 cut(s)	415, 529, 669, 915, 1059
MboI	GATC	5 cut(s)	413, 527, 667, 913, 1057
MboII	GAAGA	3 cut(s)	263, 542, 654
MflI	RGATCY	2 cut(s)	413, 527
MluCI	AATT	4 cut(s)	103, 335, 354, 437
MlyI	GAGTC	3 cut(s)	868, 1024, 1118
MmeI	TCCRAC	1 cut(s)	376
MnlI	CCTC	8 cut(s)	24, 83, 147, 181, 550, 832, 1030, 1334
MroXI	GAANNNNTTC	1 cut(s)	441
MseI	TTAA	2 cut(s)	672, 1366
MslI	CAYNNNNRTG	3 cut(s)	471, 692, 1089
MspA1I	CMGCKG	1 cut(s)	304
MspI	CCGG	2 cut(s)	146, 1291
MspR9I	CCNGG	8 cut(s)	37, 54, 147, 341, 1080, 1196, 1291, 1292
MvaI	CCWGG	5 cut(s)	37, 54, 341, 1080, 1196
MwoI	GCNNNNNNNGC	3 cut(s)	971, 1212, 1278
NciI	CCSGG	3 cut(s)	147, 1291, 1292
NcoI	CCATGG	2 cut(s)	492, 1105
NdeII	GATC	5 cut(s)	413, 527, 667, 913, 1057
NlaIII	CATG	7 cut(s)	409, 476, 496, 557, 683, 961, 1109
NlaIV	GGNNCC	2 cut(s)	100, 415
OliI	CACNNNNGTG	1 cut(s)	692
PaeR7I	CTCGAG	1 cut(s)	876
PagI	TCATGA	1 cut(s)	553
PceI	AGGCCT	2 cut(s)	1078, 1132
PdmI	GAANNNNTTC	1 cut(s)	441
PfeI	GAWTC	4 cut(s)	162, 221, 887, 1071
PflMI	CCANNNNNTGG	1 cut(s)	498
PkrI	GCNGC	6 cut(s)	75, 303, 598, 809, 973, 976
PleI	GAGTC	3 cut(s)	868, 1023, 1118
PpsI	GAGTC	3 cut(s)	868, 1023, 1118
Ppu21I	YACGTR	1 cut(s)	831
PshAI	GACNNNNGTC	1 cut(s)	645
Psp6I	CCWGG	5 cut(s)	35, 52, 339, 1078, 1194
PspFI	CCCAGC	1 cut(s)	1315
PspGI	CCWGG	5 cut(s)	35, 52, 339, 1078, 1194
PspN4I	GGNNCC	2 cut(s)	100, 415
PspPI	GGNCC	2 cut(s)	501, 864
PspXI	VCTCGAGB	1 cut(s)	876
PstI	CTGCAG	2 cut(s)	927, 976
PstNI	CAGNNNCTG	1 cut(s)	116
PsuI	RGATCY	2 cut(s)	413, 527
PvuII	CAGCTG	1 cut(s)	304
RsaI	GTAC	5 cut(s)	369, 833, 984, 1202, 1220
RsaNI	GTAC	5 cut(s)	368, 832, 983, 1201, 1219
RseI	CAYNNNNRTG	3 cut(s)	471, 692, 1089
SalI	GTCGAC	1 cut(s)	1002
SaqAI	TTAA	2 cut(s)	672, 1366
SatI	GCNGC	6 cut(s)	74, 302, 597, 808, 972, 975
Sau3AI	GATC	5 cut(s)	413, 527, 667, 913, 1057
Sau96I	GGNCC	2 cut(s)	501, 864
SchI	GAGTC	3 cut(s)	868, 1024, 1118
ScrFI	CCNGG	8 cut(s)	37, 54, 147, 341, 1080, 1196, 1291, 1292
SfaNI	GCATC	2 cut(s)	41, 830
SfcI	CTRYAG	4 cut(s)	27, 923, 972, 1096
Sfr274I	CTCGAG	1 cut(s)	876
SinI	GGWCC	1 cut(s)	501
SlaI	CTCGAG	1 cut(s)	876
SmaI	CCCGGG	1 cut(s)	1292
SmiMI	CAYNNNNRTG	3 cut(s)	471, 692, 1089
SmlI	CTYRAG	2 cut(s)	876, 1126
SmoI	CTYRAG	2 cut(s)	876, 1126
SnaBI	TACGTA	1 cut(s)	831
Sse9I	AATT	4 cut(s)	103, 335, 354, 437
SseBI	AGGCCT	2 cut(s)	1078, 1132
SsiI	CCGC	4 cut(s)	44, 71, 293, 808
SspMI	CTAG	4 cut(s)	716, 735, 918, 1209
StuI	AGGCCT	2 cut(s)	1078, 1132
StyD4I	CCNGG	8 cut(s)	35, 52, 145, 339, 1078, 1194, 1289, 1290
StyI	CCWWGG	4 cut(s)	156, 232, 492, 1105
TaaI	ACNGT	4 cut(s)	845, 1100, 1223, 1349
TaiI	ACGT	2 cut(s)	334, 833
TaqI	TCGA	2 cut(s)	877, 1003
TasI	AATT	4 cut(s)	103, 335, 354, 437
TatI	WGTACW	2 cut(s)	367, 1218
TauI	GCSGC	1 cut(s)	810
TfiI	GAWTC	4 cut(s)	162, 221, 887, 1071
Tru1I	TTAA	2 cut(s)	672, 1366
Tru9I	TTAA	2 cut(s)	672, 1366
TscAI	CASTG	6 cut(s)	91, 1096, 1228, 1246, 1279, 1354
TseI	GCWGC	5 cut(s)	73, 301, 596, 971, 974
TspDTI	ATGAA	5 cut(s)	450, 542, 569, 918, 1340
TspGWI	ACGGA	1 cut(s)	1016
TspMI	CCCGGG	1 cut(s)	1290
TspRI	CASTG	6 cut(s)	91, 1096, 1228, 1246, 1279, 1354
Van91I	CCANNNNNTGG	1 cut(s)	498
VpaK11BI	GGWCC	1 cut(s)	501
XagI	CCTNNNNNAGG	1 cut(s)	236
XapI	RAATTY	2 cut(s)	335, 437
XcmI	CCANNNNNNNNNTGG	2 cut(s)	694, 1306
XhoI	CTCGAG	1 cut(s)	876
XmaI	CCCGGG	1 cut(s)	1290
XmiI	GTMKAC	2 cut(s)	1003, 1095
XmnI	GAANNNNTTC	1 cut(s)	441
XspI	CTAG	4 cut(s)	716, 735, 918, 1209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.