Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001011

Physical Location & Seq

Genomic Coordinates Forward (+)

56099677 .. 56105412

Gene Structure 5736 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50906

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGTTCATCTTTTCTACAATCTACACCATTCACCTTCCCCATGTGTGTGAGTGTGTGACTATTCTTTTTTCACCCACTCTGCATCTTCTTCACCAAGTCCAATTCAAAAACCTCCGATTCGCTACCTTTCAAACCTCCCCGGCCATGTCGGCGCCGGCCCCGTCCACCACCAACTCCACCTCACCTCCTCCCCCTCCGCCGGCCAACGCTACTGCTCCTACCACTACTCCGCCGCCAACCAACTCCACCGCGTCGCCGCCGACCAACTCCACCACATCGCCGCCACCTCCGGCGTCGACATCTAATACGCCGCCCATAGGAAACTTGCCGCCGGGGAACACGCCGGTCGGGGTTATAGTCGGAGTTGCGATAGGAGGGTTCAGCGTACTTGTTGTAGTGGCCATTATCTTCTTTGTCTATCGGAGACGGAAGAACAGGTTGGCGAGAGCTAATGAGTCAGGTCAACAACCCAAAGATGACCAATTAAAAGGCCCACCTCAAAACTTGCAACAGAACTATGCTCCTCCTTCAGCAGACAAAGTAGAAATGTTTCCAATGCCCACTGATTCCCGTAAACCATCTTCAACCGGTAGTGGCTATGGATCAGATAAACCGCCCCCAGCCTTTGGATTTTCCGAAAGCACATTTACATATGAAGAATTAGTCATGGCAACAAATGGTTTCTCCAACGACAATCTTCTTGGTCAGGGAGGCTTTGGTTATGTCCATAAAGGAATTCTTCCAAATGGGAAAGTGGTTGCAATTAAACAGCTGAAAGCTGGGAGTGGACAGGGGGAGCGTGAATTCCAGGCAGAGGTTGAAGTCATTAATCGTGTCCATCACAGACATCTTGTATCACTGGTTGGATACTGCATTAGTGGGGCCCAGAGATTACTTGTTTATGAGTTCGTTTCCAACAACACCTTGGAATTTCACTTGCATGGAAAGGGGCGACCAACTATGACTTGGCCAACAAGAATGAGAATTGCTCTAGGATCTGCAAAAGGATTGGCATATCTCCATGAGGACTGTCATCCCAAGATCATACACCGTGACATCAAGGCGGCCAATATTCTTATAGATGACAATTTTGAGGCAAAGGTTGCAGACTTTGGACTTGCCAAGTTGGCCTTAGATACAGATACTCATGTCTCTACAAGGGTTATGGGAACTTTTGGATACTTAGCTCCTGAATATGCATCCAGTGGAAAGCTCAGTGATAAGTCGGATGTCTTCTCATTCGGAGTCGTGCTGTTGGAGTTGATTACCGGACGCCAACCCATTGATAAAACTCATTCCTTCACTGATGATAGCATGGTTGAGTGGGCAAGGCCTTTGCTCGCGCGAGCATTGGAAAAGGGAAACTTTGATGGTATTGTTGATGAAAGGTTGCAGAATGATTACAACTCCAGTGAAATGGCTTGTATGATTGCCTGCGCTGCTGCTTCTGTGCGTCATTCTGCCCGCCGTCGGCCAAAAATGAGCCAGGTAGTTCGAGCTTTGGAGGGCAATCTTTCTCCAGATGAATTAAATGAAGGAGTTATACCAGGTCAAAGTATGATATACAGTTCCTCTGAAAGCACACAATACAGCACTCGTGAATACAAGGAAGACATGTTGAAATTTAGAAAGTTAGCACTAGAAAGCCAAGAGCTAGATCAAAGAATTAGTGAGACCAGTGGGCCTAGCAGTGATTTTGGCCAGCACCAATCTGCCTCTAGTGGTGAAGGCCAACAAACCACTCAAGATATCGAACATGGGCGAATGAACAAAGACAGCCAAGACTATGGTAAAAGCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

600

Amino Acids

65.33

Weight (kDa)

6.66

Isoelectric Point (pI)

44.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	229 - 433	1.3e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	231 - 433	3.8e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24540 AT3G24550
fragaria_vesca	FvH4_1g04680 FvH4_1g04680 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540 FvH4_6g31540
malus_domestica	MD02G1045800.v1.1 MD15G1184000.v1.1 MD15G1318900.v1.1 MD17G1193400.v1.1
prunus_persica	Prupe.3G068800_v2.0.a1 Prupe.7G232200_v2.0.a1
pyrus_communis	pycom02g03820 pycom09g12790 pycom15g16560 pycom17g19940
rosa_chinensis	RchiOBHm_Chr2g0090291 RchiOBHm_Chr2g0138371 RchiOBHm_Chr2g0138381 RchiOBHm_Chr2g0138481 RchiOBHm_Chr2g0138511 RchiOBHm_Chr2g0138521 RchiOBHm_Chr2g0138601 RchiOBHm_Chr6g0297471
rosa_laevigata	RLG00000016095 RLG00000019740 RLG00000019744 RLG00000019747
rosa_multiflora	Rmu_co8232347.1_g000001 Rmu_co8362561.1_g000001 Rmu_sc0000436.1_g000004 Rmu_sc0001534.1_g000011 Rmu_sc0006235.1_g000002 Rmu_sc0008467.1_g000011 Rmu_sc0012206.1_g000004
rosa_roxburghii	Rroxscaffold_2G00106070 Rroxscaffold_2G00106140 Rroxscaffold_2G00106150 Rroxscaffold_2G00106280 Rroxscaffold_2G00151310
rosa_rugosa	Rorug02G0006300 Rorug02G0351700 Rorug06G0272400
rosa_samantha	Rh2AG052200 Rh2AG400100 Rh2AG400200 Rh2AG400800 Rh2CG386300 Rh2DG052100 Rh2DG419800 Rh2DG419900 Rh2DG420100 Rh2DG420600 Rh2DG421200
rosa_wichuraiana	Rw2G004470 Rw2G032550 Rw2G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	151
AccB7I	CCANNNNNTGG	1 cut(s)	626
AccI	GTMKAC	1 cut(s)	296
AccII	CGCG	3 cut(s)	251, 1343, 1345
AclWI	GGATC	2 cut(s)	610, 1003
AcoI	YGGCCR	7 cut(s)	141, 201, 399, 968, 1065, 1472, 1699
AcsI	RAATTY	4 cut(s)	735, 803, 929, 1622
AcuI	CTGAAG	1 cut(s)	513
AcyI	GRCGYC	3 cut(s)	152, 293, 1273
AfaI	GTAC	1 cut(s)	387
AfiI	CCNNNNNNNGG	5 cut(s)	199, 317, 626, 814, 1470
AflIII	ACRYGT	1 cut(s)	1614
AgeI	ACCGGT	1 cut(s)	587
AgsI	TTSAA	5 cut(s)	106, 131, 585, 821, 1621
AjnI	CCWGG	3 cut(s)	807, 1485, 1546
AjuI	GAANNNNNNNTTGG	2 cut(s)	422, 454
AluBI	AGCT	8 cut(s)	449, 772, 779, 1187, 1213, 1499, 1654, 1797
AluI	AGCT	8 cut(s)	449, 772, 779, 1187, 1213, 1499, 1654, 1797
Alw26I	GTCTC	3 cut(s)	418, 1156, 1667
AlwI	GGATC	2 cut(s)	610, 1003
ApaI	GGGCCC	1 cut(s)	886
ApeKI	GCWGC	2 cut(s)	1439, 1442
ApoI	RAATTY	4 cut(s)	735, 803, 929, 1622
AseI	ATTAAT	1 cut(s)	828
AsiGI	ACCGGT	1 cut(s)	587
Asp700I	GAANNNNTTC	1 cut(s)	549
AspLEI	GCGC	3 cut(s)	154, 1345, 1439
AspS9I	GGNCC	5 cut(s)	157, 491, 882, 883, 1682
AsuC2I	CCSGG	2 cut(s)	140, 333
AsuHPI	GGTGA	5 cut(s)	23, 63, 83, 174, 1736
BaeGI	GKGCMC	1 cut(s)	886
BaeI	ACNNNNGTAYC	2 cut(s)	1134, 1167
BalI	TGGCCA	3 cut(s)	401, 970, 1701
BanI	GGYRCC	1 cut(s)	151
BanII	GRGCYC	1 cut(s)	886
BarI	GAAGNNNNNNTAC	4 cut(s)	565, 597, 1527, 1559
BauI	CACGAG	1 cut(s)	1596
BbsI	GAAGAC	2 cut(s)	1225, 1617
BbvI	GCAGC	2 cut(s)	1426, 1429
BccI	CCATC	3 cut(s)	586, 846, 1364
BceAI	ACGGC	1 cut(s)	1452
BciT130I	CCWGG	3 cut(s)	809, 1487, 1548
BciVI	GTATCC	2 cut(s)	860, 1172
BcnI	CCSGG	2 cut(s)	140, 333
BcoDI	GTCTC	3 cut(s)	418, 1156, 1667
BfaI	CTAG	5 cut(s)	992, 1640, 1655, 1686, 1719
BfoI	RGCGCY	1 cut(s)	155
BfuI	GTATCC	2 cut(s)	860, 1172
BglI	GCCNNNNNGGC	2 cut(s)	149, 1127
BisI	GCNGC	8 cut(s)	233, 257, 281, 311, 329, 1065, 1440, 1443
BlsI	GCNGC	8 cut(s)	234, 258, 282, 312, 330, 1066, 1441, 1444
Bme1390I	CCNGG	5 cut(s)	140, 333, 809, 1487, 1548
BmgT120I	GGNCC	5 cut(s)	157, 491, 882, 883, 1682
BmiI	GGNNCC	4 cut(s)	153, 159, 883, 884
BmrFI	CCNGG	5 cut(s)	140, 333, 809, 1487, 1548
BmsI	GCATC	2 cut(s)	91, 1208
BpiI	GAAGAC	2 cut(s)	1225, 1617
BplI	GAGNNNNNCTC	2 cut(s)	973, 1005
BpmI	CTGGAG	2 cut(s)	1393, 1503
BpuEI	CTTGAG	1 cut(s)	1728
BpuMI	CCSGG	2 cut(s)	140, 333
BsaHI	GRCGYC	3 cut(s)	152, 293, 1273
BsaI	GGTCTC	1 cut(s)	1667
BsaJI	CCNNGG	3 cut(s)	138, 332, 924
BsaWI	WCCGGW	2 cut(s)	587, 1268
BsaXI	ACNNNNNCTCC	4 cut(s)	169, 199, 211, 241
Bsc4I	CCNNNNNNNGG	5 cut(s)	199, 317, 626, 814, 1470
Bse118I	RCCGGY	4 cut(s)	154, 199, 343, 587
Bse1I	ACTGG	4 cut(s)	864, 1203, 1410, 1677
BseBI	CCWGG	3 cut(s)	809, 1487, 1548
BseDI	CCNNGG	3 cut(s)	138, 332, 924
BseGI	GGATG	3 cut(s)	1033, 1199, 1234
BseLI	CCNNNNNNNGG	5 cut(s)	199, 317, 626, 814, 1470
BseMII	CTCAG	1 cut(s)	1228
BseNI	ACTGG	4 cut(s)	864, 1203, 1410, 1677
BseRI	GAGGAG	2 cut(s)	177, 513
BseSI	GKGCMC	1 cut(s)	886
BseXI	GCAGC	2 cut(s)	1426, 1429
BseYI	CCCAGC	2 cut(s)	619, 779
Bsh1236I	CGCG	3 cut(s)	251, 1343, 1345
Bsh1285I	CGRYCG	1 cut(s)	348
BshNI	GGYRCC	1 cut(s)	151
BshTI	ACCGGT	1 cut(s)	587
BsiEI	CGRYCG	1 cut(s)	348
BsiSI	CCGG	8 cut(s)	140, 155, 200, 290, 332, 344, 588, 1269
BslI	CCNNNNNNNGG	5 cut(s)	199, 317, 626, 814, 1470
BsmAI	GTCTC	3 cut(s)	418, 1156, 1667
BsmBI	CGTCTC	1 cut(s)	418
Bso31I	GGTCTC	1 cut(s)	1667
Bsp120I	GGGCCC	1 cut(s)	882
Bsp1286I	GDGCHC	1 cut(s)	886
Bsp143I	GATC	4 cut(s)	602, 995, 1041, 1657
BspCNI	CTCAG	1 cut(s)	1227
BspFNI	CGCG	3 cut(s)	251, 1343, 1345
BspLI	GGNNCC	4 cut(s)	153, 159, 883, 884
BspPI	GGATC	2 cut(s)	610, 1003
BspT107I	GGYRCC	1 cut(s)	151
BspTNI	GGTCTC	1 cut(s)	1667
BsrFI	RCCGGY	4 cut(s)	154, 199, 343, 587
BsrI	ACTGG	4 cut(s)	864, 1203, 1410, 1677
BssAI	RCCGGY	4 cut(s)	154, 199, 343, 587
BssECI	CCNNGG	3 cut(s)	138, 332, 924
BssMI	GATC	4 cut(s)	602, 995, 1041, 1657
BssNI	GRCGYC	3 cut(s)	152, 293, 1273
BssSI	CACGAG	1 cut(s)	1596
BssT1I	CCWWGG	1 cut(s)	924
Bst2BI	CACGAG	1 cut(s)	1596
Bst2UI	CCWGG	3 cut(s)	809, 1487, 1548
Bst4CI	ACNGT	3 cut(s)	1031, 1052, 1568
BstACI	GRCGYC	3 cut(s)	152, 293, 1273
BstAPI	GCANNNNNTGC	1 cut(s)	1103
BstC8I	GCNNGC	7 cut(s)	156, 201, 1341, 1347, 1435, 1465, 1703
BstDEI	CTNAG	3 cut(s)	1132, 1183, 1214
BstF5I	GGATG	3 cut(s)	1033, 1199, 1234
BstFNI	CGCG	3 cut(s)	251, 1343, 1345
BstH2I	RGCGCY	1 cut(s)	155
BstHHI	GCGC	3 cut(s)	154, 1345, 1439
BstKTI	GATC	4 cut(s)	605, 998, 1044, 1660
BstMAI	GTCTC	3 cut(s)	418, 1156, 1667
BstMBI	GATC	4 cut(s)	602, 995, 1041, 1657
BstMCI	CGRYCG	1 cut(s)	348
BstMWI	GCNNNNNNNGC	4 cut(s)	149, 1103, 1127, 1439
BstNI	CCWGG	3 cut(s)	809, 1487, 1548
BstNSI	RCATGY	1 cut(s)	1618
BstSCI	CCNGG	5 cut(s)	138, 331, 807, 1485, 1546
BstSLI	GKGCMC	1 cut(s)	886
BstUI	CGCG	3 cut(s)	251, 1343, 1345
BstV1I	GCAGC	2 cut(s)	1426, 1429
BstV2I	GAAGAC	2 cut(s)	1225, 1617
BstX2I	RGATCY	1 cut(s)	995
BstXI	CCANNNNNNTGG	2 cut(s)	1417, 1787
BstYI	RGATCY	1 cut(s)	995
BsuI	GTATCC	2 cut(s)	860, 1172
BtgZI	GCGATG	1 cut(s)	261
BtsCI	GGATG	3 cut(s)	1033, 1199, 1234
BtsI	GCAGTG	1 cut(s)	1696
BtsIMutI	CAGTG	8 cut(s)	561, 857, 1210, 1222, 1302, 1417, 1684, 1696
Cac8I	GCNNGC	7 cut(s)	156, 201, 1341, 1347, 1435, 1465, 1703
CfoI	GCGC	3 cut(s)	154, 1345, 1439
Cfr10I	RCCGGY	4 cut(s)	154, 199, 343, 587
Cfr13I	GGNCC	5 cut(s)	157, 491, 882, 883, 1682
CseI	GACGC	4 cut(s)	240, 282, 1281, 1442
CsiI	ACCWGGT	1 cut(s)	1546
Csp6I	GTAC	1 cut(s)	386
CspAI	ACCGGT	1 cut(s)	587
CviAII	CATG	9 cut(s)	41, 145, 667, 941, 1022, 1148, 1315, 1615, 1757
CviQI	GTAC	1 cut(s)	386
DdeI	CTNAG	3 cut(s)	1132, 1183, 1214
DinI	GGCGCC	1 cut(s)	153
DpnI	GATC	4 cut(s)	604, 997, 1043, 1659
DpnII	GATC	4 cut(s)	602, 995, 1041, 1657
EaeI	YGGCCR	7 cut(s)	141, 201, 399, 968, 1065, 1472, 1699
EciI	GGCGGA	2 cut(s)	186, 219
Eco130I	CCWWGG	1 cut(s)	924
Eco147I	AGGCCT	1 cut(s)	1333
Eco24I	GRGCYC	1 cut(s)	886
Eco31I	GGTCTC	1 cut(s)	1667
Eco32I	GATATC	1 cut(s)	1750
Eco57I	CTGAAG	1 cut(s)	513
EcoO109I	RGGNCCY	1 cut(s)	882
EcoRI	GAATTC	2 cut(s)	735, 803
EcoRII	CCWGG	3 cut(s)	807, 1485, 1546
EcoRV	GATATC	1 cut(s)	1750
EcoT14I	CCWWGG	1 cut(s)	924
EcoT22I	ATGCAT	1 cut(s)	1201
EcoT38I	GRGCYC	1 cut(s)	886
EgeI	GGCGCC	1 cut(s)	153
EheI	GGCGCC	1 cut(s)	153
ErhI	CCWWGG	1 cut(s)	924
Esp3I	CGTCTC	1 cut(s)	418
FaeI	CATG	9 cut(s)	44, 148, 670, 944, 1025, 1151, 1318, 1618, 1760
FalI	AAGNNNNNCTT	6 cut(s)	723, 755, 1115, 1147, 1349, 1381
FatI	CATG	9 cut(s)	40, 144, 666, 940, 1021, 1147, 1314, 1614, 1756
FauI	CCCGC	1 cut(s)	1472
FauNDI	CATATG	1 cut(s)	652
FblI	GTMKAC	1 cut(s)	296
Fnu4HI	GCNGC	8 cut(s)	233, 257, 281, 311, 329, 1065, 1440, 1443
FokI	GGATG	3 cut(s)	1020, 1186, 1241
FriOI	GRGCYC	1 cut(s)	886
Fsp4HI	GCNGC	8 cut(s)	233, 257, 281, 311, 329, 1065, 1440, 1443
FspBI	CTAG	5 cut(s)	992, 1640, 1655, 1686, 1719
GlaI	GCGC	3 cut(s)	153, 1344, 1438
GluI	GCNGC	8 cut(s)	233, 257, 281, 311, 329, 1065, 1440, 1443
GsaI	CCCAGC	2 cut(s)	623, 783
GsuI	CTGGAG	2 cut(s)	1393, 1503
HaeII	RGCGCY	1 cut(s)	155
HapII	CCGG	8 cut(s)	140, 155, 200, 290, 332, 344, 588, 1269
HgaI	GACGC	4 cut(s)	240, 282, 1281, 1442
HhaI	GCGC	3 cut(s)	154, 1345, 1439
Hin1I	GRCGYC	3 cut(s)	152, 293, 1273
Hin1II	CATG	9 cut(s)	44, 148, 670, 944, 1025, 1151, 1318, 1618, 1760
Hin6I	GCGC	3 cut(s)	152, 1343, 1437
HinP1I	GCGC	3 cut(s)	152, 1343, 1437
HincII	GTYRAC	2 cut(s)	297, 464
HindII	GTYRAC	2 cut(s)	297, 464
HinfI	GANTC	4 cut(s)	117, 455, 566, 1245
HpaII	CCGG	8 cut(s)	140, 155, 200, 290, 332, 344, 588, 1269
HphI	GGTGA	5 cut(s)	23, 63, 83, 174, 1736
Hpy166II	GTNNAC	5 cut(s)	165, 297, 464, 575, 788
Hpy188I	TCNGA	8 cut(s)	116, 362, 423, 607, 637, 1228, 1244, 1576
Hpy188III	TCNNGA	5 cut(s)	1190, 1520, 1598, 1745, 1800
Hpy8I	GTNNAC	5 cut(s)	165, 297, 464, 575, 788
Hpy99I	CGWCG	3 cut(s)	256, 298, 1473
HpyAV	CCTTC	5 cut(s)	44, 537, 1309, 1529, 1721
HpyCH4III	ACNGT	3 cut(s)	1031, 1052, 1568
HpyCH4V	TGCA	9 cut(s)	82, 508, 761, 873, 940, 1001, 1106, 1199, 1393
HpyF10VI	GCNNNNNNNGC	4 cut(s)	149, 1103, 1127, 1439
HpyF3I	CTNAG	3 cut(s)	1132, 1183, 1214
Hsp92I	GRCGYC	3 cut(s)	152, 293, 1273
Hsp92II	CATG	9 cut(s)	44, 148, 670, 944, 1025, 1151, 1318, 1618, 1760
HspAI	GCGC	3 cut(s)	152, 1343, 1437
KasI	GGCGCC	1 cut(s)	151
KroI	GCCGGC	2 cut(s)	154, 199
KroNI	GCCGGC	2 cut(s)	156, 201
Kzo9I	GATC	4 cut(s)	602, 995, 1041, 1657
LmnI	GCTCC	4 cut(s)	220, 526, 796, 1192
Lsp1109I	GCAGC	2 cut(s)	1426, 1429
LweI	GCATC	2 cut(s)	91, 1208
MabI	ACCWGGT	1 cut(s)	1546
MaeI	CTAG	5 cut(s)	992, 1640, 1655, 1686, 1719
MaeIII	GTNAC	2 cut(s)	55, 1052
MalI	GATC	4 cut(s)	604, 997, 1043, 1659
MboI	GATC	4 cut(s)	602, 995, 1041, 1657
MflI	RGATCY	1 cut(s)	995
MhlI	GDGCHC	1 cut(s)	886
MlsI	TGGCCA	3 cut(s)	401, 970, 1701
MluNI	TGGCCA	3 cut(s)	401, 970, 1701
Mly113I	GGCGCC	1 cut(s)	152
MlyI	GAGTC	2 cut(s)	464, 1254
MmeI	TCCRAC	6 cut(s)	340, 711, 844, 939, 1206, 1236
Mox20I	TGGCCA	3 cut(s)	401, 970, 1701
Mph1103I	ATGCAT	1 cut(s)	1201
MroNI	GCCGGC	2 cut(s)	154, 199
MroXI	GAANNNNTTC	1 cut(s)	549
MscI	TGGCCA	3 cut(s)	401, 970, 1701
MseI	TTAA	4 cut(s)	485, 765, 828, 1529
MslI	CAYNNNNRTG	2 cut(s)	45, 939
Msp20I	TGGCCA	3 cut(s)	401, 970, 1701
MspA1I	CMGCKG	1 cut(s)	772
MspI	CCGG	8 cut(s)	140, 155, 200, 290, 332, 344, 588, 1269
MspR9I	CCNGG	5 cut(s)	140, 333, 809, 1487, 1548
MvaI	CCWGG	3 cut(s)	809, 1487, 1548
MvnI	CGCG	3 cut(s)	251, 1343, 1345
MwoI	GCNNNNNNNGC	4 cut(s)	149, 1103, 1127, 1439
NaeI	GCCGGC	2 cut(s)	156, 201
NarI	GGCGCC	1 cut(s)	152
NciI	CCSGG	2 cut(s)	140, 333
NdeI	CATATG	1 cut(s)	652
NdeII	GATC	4 cut(s)	602, 995, 1041, 1657
NgoMIV	GCCGGC	2 cut(s)	154, 199
NlaIII	CATG	9 cut(s)	44, 148, 670, 944, 1025, 1151, 1318, 1618, 1760
NlaIV	GGNNCC	4 cut(s)	153, 159, 883, 884
NmuCI	GTSAC	2 cut(s)	55, 1052
NsiI	ATGCAT	1 cut(s)	1201
NspI	RCATGY	1 cut(s)	1618
PceI	AGGCCT	1 cut(s)	1333
PciI	ACATGT	1 cut(s)	1614
PdiI	GCCGGC	2 cut(s)	156, 201
PdmI	GAANNNNTTC	1 cut(s)	549
PfeI	GAWTC	2 cut(s)	117, 566
PflMI	CCANNNNNTGG	1 cut(s)	626
PinAI	ACCGGT	1 cut(s)	587
PkrI	GCNGC	8 cut(s)	234, 258, 282, 312, 330, 1066, 1441, 1444
PleI	GAGTC	2 cut(s)	463, 1253
PluTI	GGCGCC	1 cut(s)	155
PpsI	GAGTC	2 cut(s)	463, 1253
PscI	ACATGT	1 cut(s)	1614
PshBI	ATTAAT	1 cut(s)	828
Psp6I	CCWGG	3 cut(s)	807, 1485, 1546
PspFI	CCCAGC	2 cut(s)	619, 779
PspGI	CCWGG	3 cut(s)	807, 1485, 1546
PspN4I	GGNNCC	4 cut(s)	153, 159, 883, 884
PspOMI	GGGCCC	1 cut(s)	882
PspPI	GGNCC	5 cut(s)	157, 491, 882, 883, 1682
PsuI	RGATCY	1 cut(s)	995
PvuII	CAGCTG	1 cut(s)	772
RsaI	GTAC	1 cut(s)	387
RsaNI	GTAC	1 cut(s)	386
RseI	CAYNNNNRTG	2 cut(s)	45, 939
SalI	GTCGAC	1 cut(s)	295
SaqAI	TTAA	4 cut(s)	485, 765, 828, 1529
SatI	GCNGC	8 cut(s)	233, 257, 281, 311, 329, 1065, 1440, 1443
Sau3AI	GATC	4 cut(s)	602, 995, 1041, 1657
Sau96I	GGNCC	5 cut(s)	157, 491, 882, 883, 1682
SchI	GAGTC	2 cut(s)	464, 1254
ScrFI	CCNGG	5 cut(s)	140, 333, 809, 1487, 1548
SduI	GDGCHC	1 cut(s)	886
SexAI	ACCWGGT	1 cut(s)	1546
SfaNI	GCATC	2 cut(s)	91, 1208
SfoI	GGCGCC	1 cut(s)	153
SmiMI	CAYNNNNRTG	2 cut(s)	45, 939
SmlI	CTYRAG	1 cut(s)	1743
SmoI	CTYRAG	1 cut(s)	1743
SseBI	AGGCCT	1 cut(s)	1333
SspDI	GGCGCC	1 cut(s)	151
SspI	AATATT	1 cut(s)	1072
SspMI	CTAG	5 cut(s)	992, 1640, 1655, 1686, 1719
StuI	AGGCCT	1 cut(s)	1333
StyD4I	CCNGG	5 cut(s)	138, 331, 807, 1485, 1546
StyI	CCWWGG	1 cut(s)	924
TaaI	ACNGT	3 cut(s)	1031, 1052, 1568
TaqI	TCGA	3 cut(s)	296, 1495, 1752
TauI	GCSGC	6 cut(s)	235, 259, 283, 313, 331, 1067
TfiI	GAWTC	2 cut(s)	117, 566
Tru1I	TTAA	4 cut(s)	485, 765, 828, 1529
Tru9I	TTAA	4 cut(s)	485, 765, 828, 1529
TscAI	CASTG	8 cut(s)	568, 864, 1210, 1222, 1309, 1417, 1684, 1696
TseFI	GTSAC	2 cut(s)	55, 1052
TseI	GCWGC	2 cut(s)	1439, 1442
Tsp45I	GTSAC	2 cut(s)	55, 1052
TspDTI	ATGAA	5 cut(s)	669, 1398, 1539, 1548, 1781
TspGWI	ACGGA	1 cut(s)	442
TspRI	CASTG	8 cut(s)	568, 864, 1210, 1222, 1309, 1417, 1684, 1696
Van91I	CCANNNNNTGG	1 cut(s)	626
VspI	ATTAAT	1 cut(s)	828
XapI	RAATTY	4 cut(s)	735, 803, 929, 1622
XceI	RCATGY	1 cut(s)	1618
XcmI	CCANNNNNNNNNTGG	2 cut(s)	922, 963
XmiI	GTMKAC	1 cut(s)	296
XmnI	GAANNNNTTC	1 cut(s)	549
XspI	CTAG	5 cut(s)	992, 1640, 1655, 1686, 1719
Zsp2I	ATGCAT	1 cut(s)	1201

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.