Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0000808

Physical Location & Seq

Genomic Coordinates Reverse (-)

12062844 .. 12063995

Gene Structure 1152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1152700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1152 bp

ATGGCTCCTTCTCTGACCCCAAAGACGCCCGAAAACGACGCTGCAGAAAGTCAGCCCGACTTGTTCAAGCGATTCGACGTCGTTTCGGACCCCTCGGACCACCACTTCTACAGCTCCAACCTCCCGAAGAATACCGCCGGCCAAGGTTGCTTCACTAGTGGCGGCAGCAAGGTCCACAAGAAGATCATGCAGGAATGGAAGATTCTCGAGAAGCACCTCCCGGACTCCATCTATGTACGCGTCTACGACACCCGCATCGACCTCCTCCAGGCCGTCATCGTCGGCGCTGCCGGCACGCCCTACCACGACGCGCTCTTCTTCTTCGACATCGCTTTCCCGACCGATTACCCGACCCGCCCGCCCCAGGTCTATTACCACTCTTTCGGGAACCGGGTCAACCCGAACCTCTACGCGAGCGGCTACGTCTGCCTTAGCCTGCTCAACACGTGGTCCGGCAGCAAGGCGCAGAAGTGGGACCCGTCGCAGTCGACGATCCTCCAGGTCCTGGTCTCGATCCAGGGTCTCGTGCTCAACGAGAAACCCTTTTTCAACGAACCGGGCACCGGAATATTCGGCCGGGGTTGGTTGGAGAACACGGCGCAAGCCTACGGCGAGAACGCGTTCCTGTTGACTCACAAAACGACGCACATTCTGCTGCGGAGGCCGCCCAAACATTTCAGGGCGTTCGTGGCCGAGCACTTTCGGCAGAGAGCGGGTGCGATACTGAGAGCGTGCATTGCATACGCGAACGGGCTCGTAGCGGTGGGCGAGTACAAGGAGAAGGAGGAGGGTCAACAAAACGGTGCCGTTTCGGTTATAAAGGTAAGGCAAAGTTTCAGGGAGGCGTTGGAGAAGTTGTACGTGGAACTGTACAAGGATTTCAAATGGAACGGTGATTCTTTGGTGGGTTTACCCGAGCTGCTGAAGGTGGAGGTCGCCAAAACGACACCGTCGGCGCTGAAGGTGGAAGCCGCCAAAACGACGCCGTCTCCGAGAAAGAAGGGAAGCAGTGGTAGTATTGTTGGGAGGGTTTTTCGGAAACTGAAAAAGGTTTTGGGATTGGGACCTAAAAATAAGATCGGCAAGAAAGGCGGGAGCGAATCGAAGCGCAAAGCTGGAGTGGCTGCTGCCGCCGCGGATTGGGGTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

384

Amino Acids

42.32

Weight (kDa)

9.59

Isoelectric Point (pI)

34.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	62 - 186	6e-23	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000808)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g01260 FvH4_4g19890 FvH4_4g19900 FvH4_4g19910 FvH4_4g23111
malus_domestica	MD16G1152700.v1.1
prunus_persica	Prupe.1G115900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0415111 RchiOBHm_Chr4g0421801 RchiOBHm_Chr4g0425521 RchiOBHm_Chr4g0425551
rosa_laevigata	RLG00000007355 RLG00000007357 RLG00000007358 RLG00000007360 RLG00000007361 RLG00000007364 RLG00000007366 RLG00000007640 RLG00000008097 RLG00000022500
rosa_multiflora	Rmu_co8278857.1_g000001 Rmu_sc0000635.1_g000001 Rmu_sc0000709.1_g000009 Rmu_sc0001900.1_g000008 Rmu_sc0001900.1_g000009 Rmu_sc0003748.1_g000014 Rmu_sc0008440.1_g000003 Rmu_sc0010306.1_g000005 Rmu_sc0012856.1_g000010 Rmu_sc0032188.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364100 Rroxscaffold_5G00367460 Rroxscaffold_5G00367480 Rroxscaffold_5G00367490 Rroxscaffold_5G00367510 Rroxscaffold_5G00371110
rosa_rugosa	Rorug04G0176300 Rorug04G0203700 Rorug04G0203800 Rorug04G0203800 Rorug04G0203900 Rorug06G0289400
rosa_samantha	Rh4AG192100 Rh4AG235200 Rh4AG236000 Rh4AG260700 Rh4AG260900 Rh4BG190000 Rh4BG238700 Rh4BG266400 Rh4BG266600 Rh4BG266700 Rh4CG202900 Rh4CG250700 Rh4CG277700 Rh4CG277900 Rh4CG278000 Rh4DG235300 Rh4DG262700 Rh4DG262900 Rh4DG263100 Rh6BG409300 Rh6DG401700
rosa_wichuraiana	Rw4G016340 Rw4G019840 Rw4G022570 Rw4G022580 Rw4G022590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	818
AatII	GACGTC	1 cut(s)	81
AccB1I	GGYRCC	2 cut(s)	560, 803
AccB7I	CCANNNNNTGG	1 cut(s)	505
AccBSI	CCGCTC	2 cut(s)	417, 713
AccI	GTMKAC	2 cut(s)	243, 488
AccII	CGCG	6 cut(s)	240, 311, 413, 620, 746, 1136
AclWI	GGATC	2 cut(s)	487, 508
AcoI	YGGCCR	3 cut(s)	139, 574, 690
AcuI	CTGAAG	2 cut(s)	944, 980
AcvI	CACGTG	1 cut(s)	447
AcyI	GRCGYC	3 cut(s)	26, 78, 983
AfaI	GTAC	4 cut(s)	237, 773, 860, 872
AfiI	CCNNNNNNNGG	5 cut(s)	268, 364, 505, 563, 1140
AflIII	ACRYGT	3 cut(s)	238, 444, 618
AgsI	TTSAA	3 cut(s)	67, 550, 883
AhlI	ACTAGT	1 cut(s)	155
AjnI	CCWGG	5 cut(s)	267, 363, 498, 504, 516
AjuI	GAANNNNNNNTTGG	2 cut(s)	1037, 1069
AluBI	AGCT	3 cut(s)	114, 919, 1115
AluI	AGCT	3 cut(s)	114, 919, 1115
Alw21I	GWGCWC	2 cut(s)	531, 699
Alw26I	GTCTC	3 cut(s)	514, 527, 993
AlwI	GGATC	2 cut(s)	487, 508
AlwNI	CAGNNNCTG	1 cut(s)	505
Ama87I	CYCGRG	2 cut(s)	206, 914
AoxI	GGCC	5 cut(s)	139, 270, 574, 662, 690
ApeKI	GCWGC	8 cut(s)	41, 165, 287, 456, 655, 919, 1124, 1127
Asp700I	GAANNNNTTC	1 cut(s)	620
AspLEI	GCGC	6 cut(s)	287, 313, 466, 601, 958, 1110
AspS9I	GGNCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
AsuC2I	CCSGG	4 cut(s)	221, 392, 558, 578
AsuHPI	GGTGA	1 cut(s)	905
AvaI	CYCGRG	2 cut(s)	206, 914
AvaII	GGWCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
BaeGI	GKGCMC	1 cut(s)	563
BanI	GGYRCC	2 cut(s)	560, 803
BanII	GRGCYC	1 cut(s)	756
BauI	CACGAG	1 cut(s)	524
BbrPI	CACGTG	1 cut(s)	447
Bbv12I	GWGCWC	2 cut(s)	531, 699
BbvI	GCAGC	8 cut(s)	28, 177, 274, 468, 642, 906, 1111, 1114
BccI	CCATC	1 cut(s)	236
BceAI	ACGGC	5 cut(s)	257, 612, 625, 791, 970
BciT130I	CCWGG	5 cut(s)	269, 365, 500, 506, 518
BcnI	CCSGG	4 cut(s)	221, 392, 558, 578
BcoDI	GTCTC	3 cut(s)	514, 527, 993
BcuI	ACTAGT	1 cut(s)	155
BfaI	CTAG	1 cut(s)	156
BfmI	CTRYAG	2 cut(s)	42, 109
BfoI	RGCGCY	2 cut(s)	288, 959
Bme1390I	CCNGG	9 cut(s)	221, 269, 365, 392, 500, 506, 518, 558, 578
Bme18I	GGWCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
BmeT110I	CYCGRG	2 cut(s)	206, 914
BmgT120I	GGNCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
BmiI	GGNNCC	8 cut(s)	6, 90, 389, 476, 477, 562, 805, 1065
BmrFI	CCNGG	9 cut(s)	221, 269, 365, 392, 500, 506, 518, 558, 578
BmsI	GCATC	1 cut(s)	264
BpmI	CTGGAG	3 cut(s)	251, 482, 1137
Bpu10I	CCTNAGC	1 cut(s)	431
BpuMI	CCSGG	4 cut(s)	221, 392, 558, 578
BsaAI	YACGTR	2 cut(s)	447, 862
BsaHI	GRCGYC	3 cut(s)	26, 78, 983
BsaI	GGTCTC	2 cut(s)	514, 527
BsaJI	CCNNGG	6 cut(s)	93, 142, 363, 517, 577, 1134
BsaWI	WCCGGW	1 cut(s)	563
BsaXI	ACNNNNNCTCC	4 cut(s)	842, 872, 973, 1003
Bsc4I	CCNNNNNNNGG	5 cut(s)	268, 364, 505, 563, 1140
Bse118I	RCCGGY	2 cut(s)	137, 290
Bse3DI	GCAATG	1 cut(s)	735
BseBI	CCWGG	5 cut(s)	269, 365, 500, 506, 518
BseDI	CCNNGG	6 cut(s)	93, 142, 363, 517, 577, 1134
BseLI	CCNNNNNNNGG	5 cut(s)	268, 364, 505, 563, 1140
BseMI	GCAATG	1 cut(s)	735
BseMII	CTCAG	1 cut(s)	716
BseRI	GAGGAG	2 cut(s)	254, 800
BseSI	GKGCMC	1 cut(s)	563
BseX3I	CGGCCG	1 cut(s)	574
BseXI	GCAGC	8 cut(s)	28, 177, 274, 468, 642, 906, 1111, 1114
Bsh1236I	CGCG	6 cut(s)	240, 311, 413, 620, 746, 1136
Bsh1285I	CGRYCG	2 cut(s)	342, 577
BshFI	GGCC	5 cut(s)	141, 272, 576, 664, 692
BshNI	GGYRCC	2 cut(s)	560, 803
BsiEI	CGRYCG	2 cut(s)	342, 577
BsiHKAI	GWGCWC	2 cut(s)	531, 699
BsiHKCI	CYCGRG	2 cut(s)	206, 914
BsiSI	CCGG	8 cut(s)	138, 221, 291, 391, 453, 557, 564, 577
BslFI	GGGAC	2 cut(s)	488, 1077
BslI	CCNNNNNNNGG	5 cut(s)	268, 364, 505, 563, 1140
BsmAI	GTCTC	3 cut(s)	514, 527, 993
BsmBI	CGTCTC	1 cut(s)	993
BsmFI	GGGAC	2 cut(s)	488, 1077
BsnI	GGCC	5 cut(s)	141, 272, 576, 664, 692
Bso31I	GGTCTC	2 cut(s)	514, 527
BsoBI	CYCGRG	2 cut(s)	206, 914
Bsp1286I	GDGCHC	4 cut(s)	531, 563, 699, 756
Bsp1407I	TGTACA	1 cut(s)	870
Bsp143I	GATC	4 cut(s)	183, 492, 513, 1077
BspANI	GGCC	5 cut(s)	141, 272, 576, 664, 692
BspCNI	CTCAG	1 cut(s)	717
BspFNI	CGCG	6 cut(s)	240, 311, 413, 620, 746, 1136
BspLI	GGNNCC	8 cut(s)	6, 90, 389, 476, 477, 562, 805, 1065
BspMAI	CTGCAG	1 cut(s)	46
BspPI	GGATC	2 cut(s)	487, 508
BspQI	GCTCTTC	1 cut(s)	320
BspT107I	GGYRCC	2 cut(s)	560, 803
BspTNI	GGTCTC	2 cut(s)	514, 527
BsrBI	CCGCTC	2 cut(s)	417, 713
BsrDI	GCAATG	1 cut(s)	735
BsrFI	RCCGGY	2 cut(s)	137, 290
BsrGI	TGTACA	1 cut(s)	870
BssAI	RCCGGY	2 cut(s)	137, 290
BssECI	CCNNGG	6 cut(s)	93, 142, 363, 517, 577, 1134
BssMI	GATC	4 cut(s)	183, 492, 513, 1077
BssNI	GRCGYC	3 cut(s)	26, 78, 983
BssSI	CACGAG	1 cut(s)	524
BssT1I	CCWWGG	1 cut(s)	142
Bst2BI	CACGAG	1 cut(s)	524
Bst2UI	CCWGG	5 cut(s)	269, 365, 500, 506, 518
Bst4CI	ACNGT	4 cut(s)	803, 870, 893, 951
Bst6I	CTCTTC	1 cut(s)	320
BstACI	GRCGYC	3 cut(s)	26, 78, 983
BstAPI	GCANNNNNTGC	1 cut(s)	652
BstAUI	TGTACA	1 cut(s)	870
BstBAI	YACGTR	2 cut(s)	447, 862
BstC8I	GCNNGC	8 cut(s)	139, 292, 296, 359, 415, 437, 603, 733
BstDEI	CTNAG	2 cut(s)	431, 725
BstDSI	CCRYGG	1 cut(s)	1134
BstENI	CCTNNNNNAGG	1 cut(s)	266
BstFNI	CGCG	6 cut(s)	240, 311, 413, 620, 746, 1136
BstH2I	RGCGCY	2 cut(s)	288, 959
BstHHI	GCGC	6 cut(s)	287, 313, 466, 601, 958, 1110
BstKTI	GATC	4 cut(s)	186, 495, 516, 1080
BstMAI	GTCTC	3 cut(s)	514, 527, 993
BstMBI	GATC	4 cut(s)	183, 492, 513, 1077
BstMCI	CGRYCG	2 cut(s)	342, 577
BstNI	CCWGG	5 cut(s)	269, 365, 500, 506, 518
BstSCI	CCNGG	9 cut(s)	219, 267, 363, 390, 498, 504, 516, 556, 576
BstSFI	CTRYAG	2 cut(s)	42, 109
BstSLI	GKGCMC	1 cut(s)	563
BstUI	CGCG	6 cut(s)	240, 311, 413, 620, 746, 1136
BstV1I	GCAGC	8 cut(s)	28, 177, 274, 468, 642, 906, 1111, 1114
BstZI	CGGCCG	1 cut(s)	574
BsuRI	GGCC	5 cut(s)	141, 272, 576, 664, 692
BtgI	CCRYGG	1 cut(s)	1134
BtgZI	GCGATG	1 cut(s)	313
BtsI	GCAGTG	1 cut(s)	1015
BtsIMutI	CAGTG	1 cut(s)	1015
Cac8I	GCNNGC	8 cut(s)	139, 292, 296, 359, 415, 437, 603, 733
CaiI	CAGNNNCTG	1 cut(s)	505
CfoI	GCGC	6 cut(s)	287, 313, 466, 601, 958, 1110
Cfr10I	RCCGGY	2 cut(s)	137, 290
Cfr13I	GGNCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
Cfr42I	CCGCGG	1 cut(s)	1137
CseI	GACGC	6 cut(s)	34, 47, 229, 317, 652, 991
Csp6I	GTAC	4 cut(s)	236, 772, 859, 871
CviAII	CATG	1 cut(s)	187
CviQI	GTAC	4 cut(s)	236, 772, 859, 871
DdeI	CTNAG	2 cut(s)	431, 725
DpnI	GATC	4 cut(s)	185, 494, 515, 1079
DpnII	GATC	4 cut(s)	183, 492, 513, 1077
EaeI	YGGCCR	3 cut(s)	139, 574, 690
EagI	CGGCCG	1 cut(s)	574
Eam1104I	CTCTTC	1 cut(s)	320
EarI	CTCTTC	1 cut(s)	320
EclXI	CGGCCG	1 cut(s)	574
Eco130I	CCWWGG	1 cut(s)	142
Eco24I	GRGCYC	1 cut(s)	756
Eco31I	GGTCTC	2 cut(s)	514, 527
Eco47I	GGWCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
Eco52I	CGGCCG	1 cut(s)	574
Eco57I	CTGAAG	2 cut(s)	944, 980
Eco72I	CACGTG	1 cut(s)	447
Eco88I	CYCGRG	2 cut(s)	206, 914
EcoNI	CCTNNNNNAGG	1 cut(s)	266
EcoO109I	RGGNCCY	3 cut(s)	475, 502, 1064
EcoRII	CCWGG	5 cut(s)	267, 363, 498, 504, 516
EcoT14I	CCWWGG	1 cut(s)	142
EcoT38I	GRGCYC	1 cut(s)	756
ErhI	CCWWGG	1 cut(s)	142
Esp3I	CGTCTC	1 cut(s)	993
FaeI	CATG	1 cut(s)	190
FaiI	YATR	4 cut(s)	188, 234, 742, 818
FaqI	GGGAC	2 cut(s)	488, 1077
FatI	CATG	1 cut(s)	186
FauI	CCCGC	5 cut(s)	260, 362, 366, 706, 1085
FblI	GTMKAC	2 cut(s)	243, 488
FriOI	GRGCYC	1 cut(s)	756
FspBI	CTAG	1 cut(s)	156
GlaI	GCGC	6 cut(s)	286, 312, 465, 600, 957, 1109
GsuI	CTGGAG	3 cut(s)	251, 482, 1137
HaeII	RGCGCY	2 cut(s)	288, 959
HaeIII	GGCC	5 cut(s)	141, 272, 576, 664, 692
HapII	CCGG	8 cut(s)	138, 221, 291, 391, 453, 557, 564, 577
HgaI	GACGC	6 cut(s)	34, 47, 229, 317, 652, 991
HhaI	GCGC	6 cut(s)	287, 313, 466, 601, 958, 1110
Hin1I	GRCGYC	3 cut(s)	26, 78, 983
Hin1II	CATG	1 cut(s)	190
Hin6I	GCGC	6 cut(s)	285, 311, 464, 599, 956, 1108
HinP1I	GCGC	6 cut(s)	285, 311, 464, 599, 956, 1108
HincII	GTYRAC	4 cut(s)	397, 489, 630, 794
HindII	GTYRAC	4 cut(s)	397, 489, 630, 794
HinfI	GANTC	6 cut(s)	72, 202, 224, 631, 896, 1100
HpaII	CCGG	8 cut(s)	138, 221, 291, 391, 453, 557, 564, 577
HphI	GGTGA	1 cut(s)	905
Hpy166II	GTNNAC	7 cut(s)	175, 244, 397, 489, 630, 794, 911
Hpy188I	TCNGA	5 cut(s)	15, 88, 97, 993, 1038
Hpy188III	TCNNGA	6 cut(s)	124, 206, 208, 337, 385, 511
Hpy8I	GTNNAC	7 cut(s)	175, 244, 397, 489, 630, 794, 911
HpyAV	CCTTC	5 cut(s)	18, 775, 919, 955, 994
HpyCH4III	ACNGT	4 cut(s)	803, 870, 893, 951
HpyCH4IV	ACGT	4 cut(s)	78, 423, 446, 861
HpyCH4V	TGCA	4 cut(s)	44, 190, 735, 740
HpyF3I	CTNAG	2 cut(s)	431, 725
HpySE526I	ACGT	4 cut(s)	78, 423, 446, 861
Hsp92I	GRCGYC	3 cut(s)	26, 78, 983
Hsp92II	CATG	1 cut(s)	190
HspAI	GCGC	6 cut(s)	285, 311, 464, 599, 956, 1108
KflI	GGGWCCC	1 cut(s)	475
KroI	GCCGGC	2 cut(s)	137, 290
KroNI	GCCGGC	2 cut(s)	139, 292
KspI	CCGCGG	1 cut(s)	1137
Kzo9I	GATC	4 cut(s)	183, 492, 513, 1077
LguI	GCTCTTC	1 cut(s)	320
LmnI	GCTCC	3 cut(s)	10, 119, 1095
Lsp1109I	GCAGC	8 cut(s)	28, 177, 274, 468, 642, 906, 1111, 1114
LweI	GCATC	1 cut(s)	264
MaeI	CTAG	1 cut(s)	156
MaeII	ACGT	4 cut(s)	78, 423, 446, 861
MalI	GATC	4 cut(s)	185, 494, 515, 1079
MbiI	CCGCTC	2 cut(s)	417, 713
MboI	GATC	4 cut(s)	183, 492, 513, 1077
MboII	GAAGA	6 cut(s)	139, 193, 211, 307, 310, 313
MhlI	GDGCHC	4 cut(s)	531, 563, 699, 756
MluI	ACGCGT	2 cut(s)	238, 618
MlyI	GAGTC	2 cut(s)	218, 625
MmeI	TCCRAC	3 cut(s)	141, 567, 828
MroNI	GCCGGC	2 cut(s)	137, 290
MroXI	GAANNNNTTC	1 cut(s)	620
MspA1I	CMGCKG	1 cut(s)	1136
MspI	CCGG	8 cut(s)	138, 221, 291, 391, 453, 557, 564, 577
MspR9I	CCNGG	9 cut(s)	221, 269, 365, 392, 500, 506, 518, 558, 578
MvaI	CCWGG	5 cut(s)	269, 365, 500, 506, 518
MvnI	CGCG	6 cut(s)	240, 311, 413, 620, 746, 1136
NaeI	GCCGGC	2 cut(s)	139, 292
NciI	CCSGG	4 cut(s)	221, 392, 558, 578
NdeII	GATC	4 cut(s)	183, 492, 513, 1077
NgoMIV	GCCGGC	2 cut(s)	137, 290
NlaIII	CATG	1 cut(s)	190
NlaIV	GGNNCC	8 cut(s)	6, 90, 389, 476, 477, 562, 805, 1065
NmeAIII	GCCGAG	1 cut(s)	718
PaeR7I	CTCGAG	1 cut(s)	206
PciSI	GCTCTTC	1 cut(s)	320
PcsI	WCGNNNNNNNCGW	3 cut(s)	488, 531, 989
PdiI	GCCGGC	2 cut(s)	139, 292
PdmI	GAANNNNTTC	1 cut(s)	620
PfeI	GAWTC	4 cut(s)	72, 202, 896, 1100
PflFI	GACNNNGTC	2 cut(s)	949, 985
PflMI	CCANNNNNTGG	1 cut(s)	505
PfoI	TCCNGGA	1 cut(s)	219
PleI	GAGTC	2 cut(s)	218, 625
PmaCI	CACGTG	1 cut(s)	447
PmlI	CACGTG	1 cut(s)	447
PpsI	GAGTC	2 cut(s)	218, 625
Ppu21I	YACGTR	2 cut(s)	447, 862
PpuMI	RGGWCCY	3 cut(s)	475, 502, 1064
PsiI	TTATAA	1 cut(s)	818
Psp5II	RGGWCCY	3 cut(s)	475, 502, 1064
Psp6I	CCWGG	5 cut(s)	267, 363, 498, 504, 516
PspCI	CACGTG	1 cut(s)	447
PspGI	CCWGG	5 cut(s)	267, 363, 498, 504, 516
PspN4I	GGNNCC	8 cut(s)	6, 90, 389, 476, 477, 562, 805, 1065
PspPI	GGNCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
PspPPI	RGGWCCY	3 cut(s)	475, 502, 1064
PstI	CTGCAG	1 cut(s)	46
PstNI	CAGNNNCTG	1 cut(s)	505
PsyI	GACNNNGTC	2 cut(s)	949, 985
RsaI	GTAC	4 cut(s)	237, 773, 860, 872
RsaNI	GTAC	4 cut(s)	236, 772, 859, 871
SacII	CCGCGG	1 cut(s)	1137
SalI	GTCGAC	1 cut(s)	487
SapI	GCTCTTC	1 cut(s)	320
Sau3AI	GATC	4 cut(s)	183, 492, 513, 1077
Sau96I	GGNCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
SchI	GAGTC	2 cut(s)	218, 625
ScrFI	CCNGG	9 cut(s)	221, 269, 365, 392, 500, 506, 518, 558, 578
SduI	GDGCHC	4 cut(s)	531, 563, 699, 756
SfaNI	GCATC	1 cut(s)	264
SfcI	CTRYAG	2 cut(s)	42, 109
Sfr274I	CTCGAG	1 cut(s)	206
Sfr303I	CCGCGG	1 cut(s)	1137
SgrBI	CCGCGG	1 cut(s)	1137
SinI	GGWCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
SlaI	CTCGAG	1 cut(s)	206
SmlI	CTYRAG	1 cut(s)	206
SmoI	CTYRAG	1 cut(s)	206
SpeI	ACTAGT	1 cut(s)	155
SspI	AATATT	1 cut(s)	570
SspMI	CTAG	1 cut(s)	156
StyD4I	CCNGG	9 cut(s)	219, 267, 363, 390, 498, 504, 516, 556, 576
StyI	CCWWGG	1 cut(s)	142
TaaI	ACNGT	4 cut(s)	803, 870, 893, 951
TaiI	ACGT	4 cut(s)	81, 426, 449, 864
TaqI	TCGA	7 cut(s)	75, 207, 258, 324, 488, 512, 1103
TaqII	GACCGA	1 cut(s)	356
TatI	WGTACW	2 cut(s)	771, 870
TauI	GCSGC	6 cut(s)	165, 420, 667, 974, 1133, 1136
TfiI	GAWTC	4 cut(s)	72, 202, 896, 1100
TscAI	CASTG	1 cut(s)	1015
TseI	GCWGC	8 cut(s)	41, 165, 287, 456, 655, 919, 1124, 1127
TspRI	CASTG	1 cut(s)	1015
Tth111I	GACNNNGTC	2 cut(s)	949, 985
Van91I	CCANNNNNTGG	1 cut(s)	505
VpaK11BI	GGWCC	7 cut(s)	88, 97, 172, 450, 475, 502, 1064
XagI	CCTNNNNNAGG	1 cut(s)	266
XhoI	CTCGAG	1 cut(s)	206
XmiI	GTMKAC	2 cut(s)	243, 488
XmnI	GAANNNNTTC	1 cut(s)	620
XspI	CTAG	1 cut(s)	156
ZraI	GACGTC	1 cut(s)	79

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.