Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000808

Physical Location & Seq

Genomic Coordinates Forward (+)

49303992 .. 49305443

Gene Structure 1452 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00367460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGGCCGTCTCCGTCAACACCAAACCGTCATTCAAGCAGTTTGACGTCGTTTTGGACCACTCAGACCACCACTACTCCAACAGTAATTGTCGTTTCGTCGACAGTGCGGTCTATAAGAAGATCACGCGCGAGTGGAGAATTTTGGAGAAGGATCTCCCGGAAACCATATACGTGCGCATGTACGAGACACGTGTCGACCTCGTCAGGGCTGTGATTGTCGGAGCAGAAGGCACACCCTACGAGGACGGACTCTTCTTCTTCGACATCAAGTTTCCGGATAACTATCCGAACGAACCACCAAAGGTTCATTACCGCTCGCACGGATTGCGGCTTAACCCTAATCTGTACGAGACTGGACACGTTTGCTTGAGCCTACTCAACACGTGGTTTGGCCCCGGGTGGGACTCATCCCAATCCACCATCCTCCAAGTTTTGGTGTCGATCCAAGCGCTTGTTCTCAACGACAAGCCTTACTTTAATGAACCGGCTACTGGGTTTTTAAACCGGTGGTTTGGCATGAAGGATGAGTCCCAAAAATACAATGGGGACGCGTTTATTTCAACATGCAAGTCAACGTTGTATTTGCTCCGAAATCCACCCAAGAATTTTGAGGCTTTCACTGCCGACCATTTTCGTGGAAGAGCGAGTGGGATTCTGAGAGTATGCGAGGCTTATGCGAAAGTCGGCTATTACAGCTTGGAGACTGAGGCAAGCCCGTCTTCGGTTTACCTTATGAAACATTCTAGGCAGTTCAAGGAGTCGATGGAGCAGTTGTACCCACAGCTGGTTGAGGCTTTTAAAAAGAATGAGGCTTCTCGAAAGAACAATCCGGTCAAGGAATTTACTCCTCGGAAAAACAATCCAGTCAATGGATTGATGGCGGAGAGGAGTTCGACGAAGTTCGCAGATCAAGTGAAGAAGAAAGCTGAGCCAGCCTTTACTCCGGGCCGGTATATATTTCCTTCACACACCCAATCCTTAGCTAAAGAGAGCGATGCATTGCTCAATGCATCAAGCAAATTAAGATTCCTTTCATCACCTTATGACTTGCTGGCCAGACCCAAAGTAACATGCGCGGCATTTTCATCATTAATTGTGGCACACAAAACTAGTTTGTACCAAAAGCCCTCGTGCCAACGCCTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

382

Amino Acids

43.66

Weight (kDa)

9.18

Isoelectric Point (pI)

37.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	41 - 163	2e-24	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000808)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g01260 FvH4_4g19890 FvH4_4g19900 FvH4_4g19910 FvH4_4g23111
malus_domestica	MD16G1152700.v1.1
prunus_persica	Prupe.1G115900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0415111 RchiOBHm_Chr4g0421801 RchiOBHm_Chr4g0425521 RchiOBHm_Chr4g0425551
rosa_laevigata	RLG00000007355 RLG00000007357 RLG00000007358 RLG00000007360 RLG00000007361 RLG00000007364 RLG00000007366 RLG00000007640 RLG00000008097 RLG00000022500
rosa_multiflora	Rmu_co8278857.1_g000001 Rmu_sc0000635.1_g000001 Rmu_sc0000709.1_g000009 Rmu_sc0001900.1_g000008 Rmu_sc0001900.1_g000009 Rmu_sc0003748.1_g000014 Rmu_sc0008440.1_g000003 Rmu_sc0010306.1_g000005 Rmu_sc0012856.1_g000010 Rmu_sc0032188.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364100 Rroxscaffold_5G00367460 Rroxscaffold_5G00367480 Rroxscaffold_5G00367490 Rroxscaffold_5G00367510 Rroxscaffold_5G00371110
rosa_rugosa	Rorug04G0176300 Rorug04G0203700 Rorug04G0203800 Rorug04G0203800 Rorug04G0203900 Rorug06G0289400
rosa_samantha	Rh4AG192100 Rh4AG235200 Rh4AG236000 Rh4AG260700 Rh4AG260900 Rh4BG190000 Rh4BG238700 Rh4BG266400 Rh4BG266600 Rh4BG266700 Rh4CG202900 Rh4CG250700 Rh4CG277700 Rh4CG277900 Rh4CG278000 Rh4DG235300 Rh4DG262700 Rh4DG262900 Rh4DG263100 Rh6BG409300 Rh6DG401700
rosa_wichuraiana	Rw4G016340 Rw4G019840 Rw4G022570 Rw4G022580 Rw4G022590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	107
AatII	GACGTC	1 cut(s)	48
Acc16I	TGCGCA	1 cut(s)	176
AccB7I	CCANNNNNTGG	2 cut(s)	433, 869
AccBSI	CCGCTC	1 cut(s)	315
AccI	GTMKAC	2 cut(s)	99, 195
AccII	CGCG	4 cut(s)	127, 129, 551, 1076
AccIII	TCCGGA	1 cut(s)	274
AciI	CCGC	5 cut(s)	107, 313, 328, 881, 1076
AclI	AACGTT	1 cut(s)	575
AclWI	GGATC	2 cut(s)	159, 436
AcoI	YGGCCR	2 cut(s)	3, 1053
AcsI	RAATTY	3 cut(s)	138, 604, 839
AcvI	CACGTG	2 cut(s)	191, 384
AcyI	GRCGYC	1 cut(s)	45
AfaI	GTAC	4 cut(s)	182, 347, 776, 1118
AfeI	AGCGCT	1 cut(s)	450
AfiI	CCNNNNNNNGG	7 cut(s)	205, 400, 433, 491, 721, 784, 869
AflIII	ACRYGT	5 cut(s)	188, 190, 358, 381, 549
AgeI	ACCGGT	1 cut(s)	504
AgsI	TTSAA	3 cut(s)	34, 561, 754
AhlI	ACTAGT	1 cut(s)	1109
AjuI	GAANNNNNNNTTGG	4 cut(s)	14, 46, 438, 470
AluBI	AGCT	4 cut(s)	696, 784, 926, 983
AluI	AGCT	4 cut(s)	696, 784, 926, 983
Alw26I	GTCTC	4 cut(s)	13, 179, 344, 695
AlwI	GGATC	2 cut(s)	159, 436
Ama87I	CYCGRG	1 cut(s)	395
Aor13HI	TCCGGA	1 cut(s)	274
Aor51HI	AGCGCT	1 cut(s)	450
AoxI	GGCC	4 cut(s)	3, 391, 946, 1053
ApoI	RAATTY	3 cut(s)	138, 604, 839
AseI	ATTAAT	1 cut(s)	1091
AsiGI	ACCGGT	1 cut(s)	504
AspLEI	GCGC	4 cut(s)	129, 177, 451, 1076
AspS9I	GGNCC	3 cut(s)	55, 392, 946
AsuC2I	CCSGG	4 cut(s)	158, 396, 397, 945
AsuHPI	GGTGA	1 cut(s)	1029
AvaI	CYCGRG	1 cut(s)	395
AvaII	GGWCC	1 cut(s)	55
BalI	TGGCCA	1 cut(s)	1055
BauI	CACGAG	1 cut(s)	1129
BbrPI	CACGTG	2 cut(s)	191, 384
BbsI	GAAGAC	1 cut(s)	711
BccI	CCATC	3 cut(s)	428, 757, 871
BcgI	CGANNNNNNTGC	2 cut(s)	656, 690
BcnI	CCSGG	4 cut(s)	158, 396, 397, 945
BcoDI	GTCTC	4 cut(s)	13, 179, 344, 695
BcuI	ACTAGT	1 cut(s)	1109
BfaI	CTAG	2 cut(s)	744, 1110
BfoI	RGCGCY	1 cut(s)	452
BisI	GCNGC	2 cut(s)	329, 1077
BlpI	GCTNAGC	1 cut(s)	927
BlsI	GCNGC	2 cut(s)	330, 1078
Bme1390I	CCNGG	4 cut(s)	158, 396, 397, 945
Bme18I	GGWCC	1 cut(s)	55
BmeT110I	CYCGRG	1 cut(s)	395
BmgT120I	GGNCC	3 cut(s)	55, 392, 946
BmiI	GGNNCC	1 cut(s)	394
BmrFI	CCNGG	4 cut(s)	158, 396, 397, 945
BmrI	ACTGGG	1 cut(s)	501
BmsI	GCATC	2 cut(s)	985, 1019
BmuI	ACTGGG	1 cut(s)	501
BoxI	GACNNNNGTC	1 cut(s)	191
BpiI	GAAGAC	1 cut(s)	711
Bpu10I	CCTNAGC	1 cut(s)	979
Bpu1102I	GCTNAGC	1 cut(s)	927
BpuEI	CTTGAG	1 cut(s)	388
BpuMI	CCSGG	4 cut(s)	158, 396, 397, 945
BsaAI	YACGTR	3 cut(s)	172, 191, 384
BsaBI	GATNNNNATC	1 cut(s)	282
BsaHI	GRCGYC	1 cut(s)	45
BsaJI	CCNNGG	3 cut(s)	394, 395, 848
BsaWI	WCCGGW	3 cut(s)	274, 504, 829
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 758, 788
Bsc4I	CCNNNNNNNGG	7 cut(s)	205, 400, 433, 491, 721, 784, 869
Bse118I	RCCGGY	3 cut(s)	484, 504, 948
Bse1I	ACTGG	3 cut(s)	358, 496, 863
Bse3DI	GCAATG	1 cut(s)	998
Bse8I	GATNNNNATC	1 cut(s)	282
BseAI	TCCGGA	1 cut(s)	274
BseDI	CCNNGG	3 cut(s)	394, 395, 848
BseGI	GGATG	3 cut(s)	407, 420, 529
BseJI	GATNNNNATC	1 cut(s)	282
BseLI	CCNNNNNNNGG	7 cut(s)	205, 400, 433, 491, 721, 784, 869
BseMI	GCAATG	1 cut(s)	998
BseMII	CTCAG	4 cut(s)	75, 647, 696, 918
BseNI	ACTGG	3 cut(s)	358, 496, 863
BseRI	GAGGAG	2 cut(s)	837, 901
Bsh1236I	CGCG	4 cut(s)	127, 129, 551, 1076
BshFI	GGCC	4 cut(s)	5, 393, 948, 1055
BshTI	ACCGGT	1 cut(s)	504
BsiHKCI	CYCGRG	1 cut(s)	395
BsiSI	CCGG	8 cut(s)	158, 275, 396, 485, 505, 830, 944, 949
BslFI	GGGAC	3 cut(s)	416, 514, 560
BslI	CCNNNNNNNGG	7 cut(s)	205, 400, 433, 491, 721, 784, 869
BsmAI	GTCTC	4 cut(s)	13, 179, 344, 695
BsmBI	CGTCTC	1 cut(s)	13
BsmFI	GGGAC	3 cut(s)	416, 514, 560
BsnI	GGCC	4 cut(s)	5, 393, 948, 1055
BsoBI	CYCGRG	1 cut(s)	395
Bsp13I	TCCGGA	1 cut(s)	274
Bsp143I	GATC	4 cut(s)	120, 151, 441, 907
Bsp1720I	GCTNAGC	1 cut(s)	927
BspACI	CCGC	5 cut(s)	107, 313, 328, 881, 1076
BspANI	GGCC	4 cut(s)	5, 393, 948, 1055
BspCNI	CTCAG	4 cut(s)	74, 648, 697, 919
BspEI	TCCGGA	1 cut(s)	274
BspFNI	CGCG	4 cut(s)	127, 129, 551, 1076
BspLI	GGNNCC	1 cut(s)	394
BspPI	GGATC	2 cut(s)	159, 436
BspQI	GCTCTTC	1 cut(s)	634
BsrBI	CCGCTC	1 cut(s)	315
BsrDI	GCAATG	1 cut(s)	998
BsrFI	RCCGGY	3 cut(s)	484, 504, 948
BsrI	ACTGG	3 cut(s)	358, 496, 863
BssAI	RCCGGY	3 cut(s)	484, 504, 948
BssECI	CCNNGG	3 cut(s)	394, 395, 848
BssMI	GATC	4 cut(s)	120, 151, 441, 907
BssNI	GRCGYC	1 cut(s)	45
BssSI	CACGAG	1 cut(s)	1129
Bst2BI	CACGAG	1 cut(s)	1129
Bst4CI	ACNGT	3 cut(s)	27, 83, 104
Bst6I	CTCTTC	2 cut(s)	257, 634
BstACI	GRCGYC	1 cut(s)	45
BstAPI	GCANNNNNTGC	1 cut(s)	325
BstBAI	YACGTR	3 cut(s)	172, 191, 384
BstC8I	GCNNGC	4 cut(s)	317, 712, 933, 1053
BstDEI	CTNAG	5 cut(s)	61, 656, 705, 927, 979
BstF5I	GGATG	3 cut(s)	407, 420, 529
BstFNI	CGCG	4 cut(s)	127, 129, 551, 1076
BstH2I	RGCGCY	1 cut(s)	452
BstHHI	GCGC	4 cut(s)	129, 177, 451, 1076
BstKTI	GATC	4 cut(s)	123, 154, 444, 910
BstMAI	GTCTC	4 cut(s)	13, 179, 344, 695
BstMBI	GATC	4 cut(s)	120, 151, 441, 907
BstMWI	GCNNNNNNNGC	4 cut(s)	325, 620, 693, 932
BstNSI	RCATGY	3 cut(s)	181, 567, 1074
BstPAI	GACNNNNGTC	1 cut(s)	191
BstSCI	CCNGG	4 cut(s)	156, 394, 395, 943
BstUI	CGCG	4 cut(s)	127, 129, 551, 1076
BstV2I	GAAGAC	1 cut(s)	711
BstX2I	RGATCY	1 cut(s)	151
BstXI	CCANNNNNNTGG	1 cut(s)	635
BstYI	RGATCY	1 cut(s)	151
BsuRI	GGCC	4 cut(s)	5, 393, 948, 1055
BtgZI	GCGATG	1 cut(s)	1008
BtsCI	GGATG	3 cut(s)	407, 420, 529
BtsI	GCAGTG	1 cut(s)	618
BtsIMutI	CAGTG	2 cut(s)	109, 618
Cac8I	GCNNGC	4 cut(s)	317, 712, 933, 1053
CfoI	GCGC	4 cut(s)	129, 177, 451, 1076
Cfr10I	RCCGGY	3 cut(s)	484, 504, 948
Cfr13I	GGNCC	3 cut(s)	55, 392, 946
Cfr9I	CCCGGG	1 cut(s)	395
CseI	GACGC	1 cut(s)	557
Csp6I	GTAC	4 cut(s)	181, 346, 775, 1117
CspAI	ACCGGT	1 cut(s)	504
CviAII	CATG	4 cut(s)	178, 517, 564, 1071
CviQI	GTAC	4 cut(s)	181, 346, 775, 1117
DdeI	CTNAG	5 cut(s)	61, 656, 705, 927, 979
DpnI	GATC	4 cut(s)	122, 153, 443, 909
DpnII	GATC	4 cut(s)	120, 151, 441, 907
DraI	TTTAAA	2 cut(s)	501, 799
DrdI	GACNNNNNNGTC	1 cut(s)	107
DseDI	GACNNNNNNGTC	1 cut(s)	107
EaeI	YGGCCR	2 cut(s)	3, 1053
Eam1104I	CTCTTC	2 cut(s)	257, 634
EarI	CTCTTC	2 cut(s)	257, 634
EciI	GGCGGA	1 cut(s)	896
Eco47I	GGWCC	1 cut(s)	55
Eco47III	AGCGCT	1 cut(s)	450
Eco72I	CACGTG	2 cut(s)	191, 384
Eco88I	CYCGRG	1 cut(s)	395
EcoT22I	ATGCAT	2 cut(s)	1000, 1012
Esp3I	CGTCTC	1 cut(s)	13
FaeI	CATG	4 cut(s)	181, 520, 567, 1074
FalI	AAGNNNNNCTT	4 cut(s)	458, 490, 703, 735
FaqI	GGGAC	3 cut(s)	416, 514, 560
FatI	CATG	4 cut(s)	177, 516, 563, 1070
FblI	GTMKAC	2 cut(s)	99, 195
Fnu4HI	GCNGC	2 cut(s)	329, 1077
FokI	GGATG	3 cut(s)	394, 407, 536
Fsp4HI	GCNGC	2 cut(s)	329, 1077
FspAI	RTGCGCAY	1 cut(s)	176
FspBI	CTAG	2 cut(s)	744, 1110
FspI	TGCGCA	1 cut(s)	176
GlaI	GCGC	4 cut(s)	128, 176, 450, 1075
GluI	GCNGC	2 cut(s)	329, 1077
HaeII	RGCGCY	1 cut(s)	452
HaeIII	GGCC	4 cut(s)	5, 393, 948, 1055
HapII	CCGG	8 cut(s)	158, 275, 396, 485, 505, 830, 944, 949
HgaI	GACGC	1 cut(s)	557
HhaI	GCGC	4 cut(s)	129, 177, 451, 1076
Hin1I	GRCGYC	1 cut(s)	45
Hin1II	CATG	4 cut(s)	181, 520, 567, 1074
Hin6I	GCGC	4 cut(s)	127, 175, 449, 1074
HinP1I	GCGC	4 cut(s)	127, 175, 449, 1074
HincII	GTYRAC	4 cut(s)	16, 100, 196, 573
HindII	GTYRAC	4 cut(s)	16, 100, 196, 573
HinfI	GANTC	6 cut(s)	249, 404, 527, 652, 758, 1026
HpaII	CCGG	8 cut(s)	158, 275, 396, 485, 505, 830, 944, 949
HphI	GGTGA	1 cut(s)	1029
Hpy166II	GTNNAC	5 cut(s)	16, 100, 196, 573, 727
Hpy188I	TCNGA	6 cut(s)	64, 221, 288, 590, 657, 852
Hpy188III	TCNNGA	2 cut(s)	275, 816
Hpy8I	GTNNAC	5 cut(s)	16, 100, 196, 573, 727
Hpy99I	CGWCG	3 cut(s)	50, 101, 898
HpyAV	CCTTC	4 cut(s)	142, 221, 514, 972
HpyCH4III	ACNGT	3 cut(s)	27, 83, 104
HpyCH4IV	ACGT	6 cut(s)	45, 171, 190, 360, 383, 575
HpyCH4V	TGCA	3 cut(s)	567, 998, 1010
HpyF10VI	GCNNNNNNNGC	4 cut(s)	325, 620, 693, 932
HpyF3I	CTNAG	5 cut(s)	61, 656, 705, 927, 979
HpySE526I	ACGT	6 cut(s)	45, 171, 190, 360, 383, 575
Hsp92I	GRCGYC	1 cut(s)	45
Hsp92II	CATG	4 cut(s)	181, 520, 567, 1074
HspAI	GCGC	4 cut(s)	127, 175, 449, 1074
Kpn2I	TCCGGA	1 cut(s)	274
Kzo9I	GATC	4 cut(s)	120, 151, 441, 907
LguI	GCTCTTC	1 cut(s)	634
LmnI	GCTCC	3 cut(s)	221, 591, 766
LweI	GCATC	2 cut(s)	985, 1019
MaeI	CTAG	2 cut(s)	744, 1110
MaeII	ACGT	6 cut(s)	45, 171, 190, 360, 383, 575
MaeIII	GTNAC	1 cut(s)	1066
MalI	GATC	4 cut(s)	122, 153, 443, 909
MbiI	CCGCTC	1 cut(s)	315
MboI	GATC	4 cut(s)	120, 151, 441, 907
MboII	GAAGA	8 cut(s)	130, 244, 247, 250, 651, 711, 928, 931
MflI	RGATCY	1 cut(s)	151
MlsI	TGGCCA	1 cut(s)	1055
MluCI	AATT	6 cut(s)	85, 138, 604, 839, 1019, 1092
MluI	ACGCGT	1 cut(s)	549
MluNI	TGGCCA	1 cut(s)	1055
MlyI	GAGTC	4 cut(s)	243, 398, 536, 767
MmeI	TCCRAC	2 cut(s)	102, 199
Mox20I	TGGCCA	1 cut(s)	1055
Mph1103I	ATGCAT	2 cut(s)	1000, 1012
MroI	TCCGGA	1 cut(s)	274
MscI	TGGCCA	1 cut(s)	1055
MseI	TTAA	6 cut(s)	333, 477, 500, 798, 1022, 1091
MslI	CAYNNNNRTG	2 cut(s)	170, 633
Msp20I	TGGCCA	1 cut(s)	1055
MspA1I	CMGCKG	1 cut(s)	784
MspI	CCGG	8 cut(s)	158, 275, 396, 485, 505, 830, 944, 949
MspR9I	CCNGG	4 cut(s)	158, 396, 397, 945
MvnI	CGCG	4 cut(s)	127, 129, 551, 1076
MwoI	GCNNNNNNNGC	4 cut(s)	325, 620, 693, 932
NciI	CCSGG	4 cut(s)	158, 396, 397, 945
NdeII	GATC	4 cut(s)	120, 151, 441, 907
NlaIII	CATG	4 cut(s)	181, 520, 567, 1074
NlaIV	GGNNCC	1 cut(s)	394
NsbI	TGCGCA	1 cut(s)	176
NsiI	ATGCAT	2 cut(s)	1000, 1012
NspI	RCATGY	3 cut(s)	181, 567, 1074
PciSI	GCTCTTC	1 cut(s)	634
PfeI	GAWTC	2 cut(s)	652, 1026
PflFI	GACNNNGTC	1 cut(s)	200
PflMI	CCANNNNNTGG	2 cut(s)	433, 869
PfoI	TCCNGGA	1 cut(s)	156
PinAI	ACCGGT	1 cut(s)	504
PkrI	GCNGC	2 cut(s)	330, 1078
PleI	GAGTC	4 cut(s)	243, 398, 535, 766
PmaCI	CACGTG	2 cut(s)	191, 384
PmlI	CACGTG	2 cut(s)	191, 384
PpsI	GAGTC	4 cut(s)	243, 398, 535, 766
Ppu21I	YACGTR	3 cut(s)	172, 191, 384
PshAI	GACNNNNGTC	1 cut(s)	191
PshBI	ATTAAT	1 cut(s)	1091
Psp1406I	AACGTT	1 cut(s)	575
PspCI	CACGTG	2 cut(s)	191, 384
PspN4I	GGNNCC	1 cut(s)	394
PspPI	GGNCC	3 cut(s)	55, 392, 946
PsuI	RGATCY	1 cut(s)	151
PsyI	GACNNNGTC	1 cut(s)	200
PvuII	CAGCTG	1 cut(s)	784
RsaI	GTAC	4 cut(s)	182, 347, 776, 1118
RsaNI	GTAC	4 cut(s)	181, 346, 775, 1117
RseI	CAYNNNNRTG	2 cut(s)	170, 633
SalI	GTCGAC	2 cut(s)	98, 194
SapI	GCTCTTC	1 cut(s)	634
SaqAI	TTAA	6 cut(s)	333, 477, 500, 798, 1022, 1091
SatI	GCNGC	2 cut(s)	329, 1077
Sau3AI	GATC	4 cut(s)	120, 151, 441, 907
Sau96I	GGNCC	3 cut(s)	55, 392, 946
SchI	GAGTC	4 cut(s)	243, 398, 536, 767
ScrFI	CCNGG	4 cut(s)	158, 396, 397, 945
SfaNI	GCATC	2 cut(s)	985, 1019
SinI	GGWCC	1 cut(s)	55
SmaI	CCCGGG	1 cut(s)	397
SmiMI	CAYNNNNRTG	2 cut(s)	170, 633
SmlI	CTYRAG	1 cut(s)	367
SmoI	CTYRAG	1 cut(s)	367
SpeI	ACTAGT	1 cut(s)	1109
Sse9I	AATT	6 cut(s)	85, 138, 604, 839, 1019, 1092
SsiI	CCGC	5 cut(s)	107, 313, 328, 881, 1076
SspMI	CTAG	2 cut(s)	744, 1110
StyD4I	CCNGG	4 cut(s)	156, 394, 395, 943
TaaI	ACNGT	3 cut(s)	27, 83, 104
TaiI	ACGT	6 cut(s)	48, 174, 193, 363, 386, 578
TaqI	TCGA	7 cut(s)	99, 195, 261, 440, 761, 817, 893
TasI	AATT	6 cut(s)	85, 138, 604, 839, 1019, 1092
TauI	GCSGC	2 cut(s)	331, 1079
TfiI	GAWTC	2 cut(s)	652, 1026
Tru1I	TTAA	6 cut(s)	333, 477, 500, 798, 1022, 1091
Tru9I	TTAA	6 cut(s)	333, 477, 500, 798, 1022, 1091
TscAI	CASTG	2 cut(s)	109, 625
TspDTI	ATGAA	7 cut(s)	296, 495, 533, 749, 1023, 1074, 1133
TspGWI	ACGGA	2 cut(s)	261, 336
TspMI	CCCGGG	1 cut(s)	395
TspRI	CASTG	2 cut(s)	109, 625
Tth111I	GACNNNGTC	1 cut(s)	200
Van91I	CCANNNNNTGG	2 cut(s)	433, 869
VpaK11BI	GGWCC	1 cut(s)	55
VspI	ATTAAT	1 cut(s)	1091
XapI	RAATTY	3 cut(s)	138, 604, 839
XceI	RCATGY	3 cut(s)	181, 567, 1074
XcmI	CCANNNNNNNNNTGG	1 cut(s)	539
XmaI	CCCGGG	1 cut(s)	395
XmiI	GTMKAC	2 cut(s)	99, 195
XspI	CTAG	2 cut(s)	744, 1110
ZraI	GACGTC	1 cut(s)	46
Zsp2I	ATGCAT	2 cut(s)	1000, 1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.