Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0000808

Physical Location & Seq

Genomic Coordinates Forward (+)

57680927 .. 57682278

Gene Structure 1352 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG260700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1014 bp

ATGGCCGTCTCCGTCAACACCAAACCGTCGTTCAAGCAGTTTGACGTCGTTATGGACCACTCAGACCACCACTACTCGGACAGTAAATGTCGTTTCATTGACAGTACGGTCTATAAGAAGATCACGCGCGAGTGGAGAATTTTGGAGAAGGATCTCCCGGAAACCATATACGTGCGCACGTACGAGTCACGTGTCGACCTCGTCAGGGCTGTGATTGTCGGAGCAGAAGGCACACCCTACGAGGGCGGACTCTTCTTCTTCGACATCAAGTTCCCGGATAACTATCCGTACGAACCACCAAAGGTTCATTACCGCTCGCACGGATTGCGGCTTAACCCTAATCTGTACGAGACTGGACATGTTTGCTTGAGCCTACTCAACACGTGGTTTGGCCCGGGGTGGGACTCATCCCAATCCACCATCCTCCAAGTTTTGGTGTCGATCCAAGCGCTTGTTCTCAACGACAAGCCTTACTTTAATGAACCAGCTACTGGGTTTTTAAACCGGTGGTTTGGCATGAAGGATGAGTCCCAAAAATACAATGGGGACGCGTTTATTTCAACGTGCAAGTCAACGTTGTATTTGCTCCGAAATCCACCCAAGAATTTTGAGGCTTTCACTGCCGACCATTTTCTTGGAAGAGCGAGTGGGATTCTGAGAGAGTGCAAGGCTTATGCGAAAGTCGGCTATTACAGCAAGGAGACTGAGGCAAGCCCGTCTTCCGTTTACCTTGTGAAACATTCCAGGAAGTTCAAGGAGTCCATGGAGCAGTTGTACCCACAGCTGGTTGAGGCTTTTAAAAAGAATGAGGCTTCTCGAAAGAACAATCCGGTCAAGGAATTTACTTCTCGGAAAAAAAATCCAGTCAAGGAATTGATGGCGGAGAGTAGTTCGACGAAGTTCGCAGATCAAGTGAAGAAGAAAGCTGAGCCGGCCTTTACTCCGGGCCGGTTATTTTCCGCTGCATTTTTGGTCTCTGTAGCTTTTGTAGTAGTAGTAGTACGTAGAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

337

Amino Acids

38.65

Weight (kDa)

9.32

Isoelectric Point (pI)

38.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	41 - 163	7.7e-25	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000808)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g01260 FvH4_4g19890 FvH4_4g19900 FvH4_4g19910 FvH4_4g23111
malus_domestica	MD16G1152700.v1.1
prunus_persica	Prupe.1G115900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0415111 RchiOBHm_Chr4g0421801 RchiOBHm_Chr4g0425521 RchiOBHm_Chr4g0425551
rosa_laevigata	RLG00000007355 RLG00000007357 RLG00000007358 RLG00000007360 RLG00000007361 RLG00000007364 RLG00000007366 RLG00000007640 RLG00000008097 RLG00000022500
rosa_multiflora	Rmu_co8278857.1_g000001 Rmu_sc0000635.1_g000001 Rmu_sc0000709.1_g000009 Rmu_sc0001900.1_g000008 Rmu_sc0001900.1_g000009 Rmu_sc0003748.1_g000014 Rmu_sc0008440.1_g000003 Rmu_sc0010306.1_g000005 Rmu_sc0012856.1_g000010 Rmu_sc0032188.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364100 Rroxscaffold_5G00367460 Rroxscaffold_5G00367480 Rroxscaffold_5G00367490 Rroxscaffold_5G00367510 Rroxscaffold_5G00371110
rosa_rugosa	Rorug04G0176300 Rorug04G0203700 Rorug04G0203800 Rorug04G0203800 Rorug04G0203900 Rorug06G0289400
rosa_samantha	Rh4AG192100 Rh4AG235200 Rh4AG236000 Rh4AG260700 Rh4AG260900 Rh4BG190000 Rh4BG238700 Rh4BG266400 Rh4BG266600 Rh4BG266700 Rh4CG202900 Rh4CG250700 Rh4CG277700 Rh4CG277900 Rh4CG278000 Rh4DG235300 Rh4DG262700 Rh4DG262900 Rh4DG263100 Rh6BG409300 Rh6DG401700
rosa_wichuraiana	Rw4G016340 Rw4G019840 Rw4G022570 Rw4G022580 Rw4G022590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	107
AatII	GACGTC	1 cut(s)	48
Acc16I	TGCGCA	1 cut(s)	176
AccB7I	CCANNNNNTGG	2 cut(s)	433, 491
AccBSI	CCGCTC	1 cut(s)	315
AccI	GTMKAC	1 cut(s)	195
AccII	CGCG	3 cut(s)	127, 129, 551
AciI	CCGC	5 cut(s)	246, 313, 328, 881, 960
AclI	AACGTT	1 cut(s)	575
AclWI	GGATC	2 cut(s)	159, 436
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	138, 604, 839
AcvI	CACGTG	2 cut(s)	191, 384
AcyI	GRCGYC	1 cut(s)	45
AfaI	GTAC	6 cut(s)	106, 182, 290, 347, 776, 1002
AfeI	AGCGCT	1 cut(s)	450
AfiI	CCNNNNNNNGG	7 cut(s)	76, 205, 242, 400, 433, 491, 784
AflIII	ACRYGT	4 cut(s)	190, 358, 381, 549
AgeI	ACCGGT	1 cut(s)	504
AgsI	TTSAA	3 cut(s)	34, 561, 754
AjnI	CCWGG	1 cut(s)	743
AjuI	GAANNNNNNNTTGG	4 cut(s)	14, 46, 438, 470
AluBI	AGCT	4 cut(s)	488, 784, 926, 983
AluI	AGCT	4 cut(s)	488, 784, 926, 983
Alw26I	GTCTC	4 cut(s)	13, 344, 695, 979
AlwI	GGATC	2 cut(s)	159, 436
AlwNI	CAGNNNCTG	1 cut(s)	491
Ama87I	CYCGRG	1 cut(s)	394
Aor51HI	AGCGCT	1 cut(s)	450
AoxI	GGCC	4 cut(s)	3, 391, 933, 946
ApeKI	GCWGC	1 cut(s)	962
ApoI	RAATTY	3 cut(s)	138, 604, 839
AsiGI	ACCGGT	1 cut(s)	504
AspLEI	GCGC	3 cut(s)	129, 177, 451
AspS9I	GGNCC	3 cut(s)	55, 392, 946
AsuC2I	CCSGG	5 cut(s)	158, 275, 395, 396, 945
AvaI	CYCGRG	1 cut(s)	394
AvaII	GGWCC	1 cut(s)	55
BbrPI	CACGTG	2 cut(s)	191, 384
BbsI	GAAGAC	1 cut(s)	711
BbvI	GCAGC	1 cut(s)	949
BccI	CCATC	2 cut(s)	428, 871
BciT130I	CCWGG	1 cut(s)	745
BcnI	CCSGG	5 cut(s)	158, 275, 395, 396, 945
BcoDI	GTCTC	4 cut(s)	13, 344, 695, 979
BfmI	CTRYAG	1 cut(s)	978
BfoI	RGCGCY	1 cut(s)	452
BisI	GCNGC	2 cut(s)	329, 963
BlpI	GCTNAGC	1 cut(s)	927
BlsI	GCNGC	2 cut(s)	330, 964
Bme1390I	CCNGG	6 cut(s)	158, 275, 395, 396, 745, 945
Bme18I	GGWCC	1 cut(s)	55
BmeT110I	CYCGRG	1 cut(s)	394
BmgT120I	GGNCC	3 cut(s)	55, 392, 946
BmrFI	CCNGG	6 cut(s)	158, 275, 395, 396, 745, 945
BmrI	ACTGGG	1 cut(s)	501
BmuI	ACTGGG	1 cut(s)	501
BpiI	GAAGAC	1 cut(s)	711
Bpu1102I	GCTNAGC	1 cut(s)	927
BpuEI	CTTGAG	1 cut(s)	388
BpuMI	CCSGG	5 cut(s)	158, 275, 395, 396, 945
BsaAI	YACGTR	5 cut(s)	172, 180, 191, 384, 1004
BsaBI	GATNNNNATC	1 cut(s)	282
BsaHI	GRCGYC	1 cut(s)	45
BsaI	GGTCTC	1 cut(s)	979
BsaJI	CCNNGG	3 cut(s)	394, 395, 762
BsaWI	WCCGGW	2 cut(s)	504, 829
BsaXI	ACNNNNNCTCC	2 cut(s)	758, 788
Bsc4I	CCNNNNNNNGG	7 cut(s)	76, 205, 242, 400, 433, 491, 784
Bse118I	RCCGGY	3 cut(s)	504, 931, 948
Bse1I	ACTGG	3 cut(s)	358, 496, 863
Bse8I	GATNNNNATC	1 cut(s)	282
BseBI	CCWGG	1 cut(s)	745
BseDI	CCNNGG	3 cut(s)	394, 395, 762
BseGI	GGATG	3 cut(s)	407, 420, 529
BseJI	GATNNNNATC	1 cut(s)	282
BseLI	CCNNNNNNNGG	7 cut(s)	76, 205, 242, 400, 433, 491, 784
BseMII	CTCAG	4 cut(s)	75, 647, 696, 918
BseNI	ACTGG	3 cut(s)	358, 496, 863
BseXI	GCAGC	1 cut(s)	949
Bsh1236I	CGCG	3 cut(s)	127, 129, 551
BshFI	GGCC	4 cut(s)	5, 393, 935, 948
BshTI	ACCGGT	1 cut(s)	504
BsiHKCI	CYCGRG	1 cut(s)	394
BsiSI	CCGG	8 cut(s)	158, 275, 395, 505, 830, 932, 944, 949
BsiWI	CGTACG	2 cut(s)	180, 288
BslFI	GGGAC	3 cut(s)	416, 514, 560
BslI	CCNNNNNNNGG	7 cut(s)	76, 205, 242, 400, 433, 491, 784
BsmAI	GTCTC	4 cut(s)	13, 344, 695, 979
BsmBI	CGTCTC	1 cut(s)	13
BsmFI	GGGAC	3 cut(s)	416, 514, 560
BsnI	GGCC	4 cut(s)	5, 393, 935, 948
Bso31I	GGTCTC	1 cut(s)	979
BsoBI	CYCGRG	1 cut(s)	394
Bsp143I	GATC	4 cut(s)	120, 151, 441, 907
Bsp1720I	GCTNAGC	1 cut(s)	927
Bsp19I	CCATGG	1 cut(s)	762
BspACI	CCGC	5 cut(s)	246, 313, 328, 881, 960
BspANI	GGCC	4 cut(s)	5, 393, 935, 948
BspCNI	CTCAG	4 cut(s)	74, 648, 697, 919
BspFNI	CGCG	3 cut(s)	127, 129, 551
BspPI	GGATC	2 cut(s)	159, 436
BspQI	GCTCTTC	1 cut(s)	634
BspTNI	GGTCTC	1 cut(s)	979
BsrBI	CCGCTC	1 cut(s)	315
BsrFI	RCCGGY	3 cut(s)	504, 931, 948
BsrI	ACTGG	3 cut(s)	358, 496, 863
BssAI	RCCGGY	3 cut(s)	504, 931, 948
BssECI	CCNNGG	3 cut(s)	394, 395, 762
BssMI	GATC	4 cut(s)	120, 151, 441, 907
BssNI	GRCGYC	1 cut(s)	45
BssT1I	CCWWGG	1 cut(s)	762
Bst2UI	CCWGG	1 cut(s)	745
Bst4CI	ACNGT	4 cut(s)	27, 83, 104, 109
Bst6I	CTCTTC	2 cut(s)	257, 634
BstACI	GRCGYC	1 cut(s)	45
BstAPI	GCANNNNNTGC	1 cut(s)	325
BstBAI	YACGTR	5 cut(s)	172, 180, 191, 384, 1004
BstC8I	GCNNGC	3 cut(s)	317, 712, 933
BstDEI	CTNAG	4 cut(s)	61, 656, 705, 927
BstDSI	CCRYGG	1 cut(s)	762
BstF5I	GGATG	3 cut(s)	407, 420, 529
BstFNI	CGCG	3 cut(s)	127, 129, 551
BstH2I	RGCGCY	1 cut(s)	452
BstHHI	GCGC	3 cut(s)	129, 177, 451
BstKTI	GATC	4 cut(s)	123, 154, 444, 910
BstMAI	GTCTC	4 cut(s)	13, 344, 695, 979
BstMBI	GATC	4 cut(s)	120, 151, 441, 907
BstMWI	GCNNNNNNNGC	4 cut(s)	325, 620, 693, 932
BstNI	CCWGG	1 cut(s)	745
BstNSI	RCATGY	1 cut(s)	362
BstSCI	CCNGG	6 cut(s)	156, 273, 393, 394, 743, 943
BstSFI	CTRYAG	1 cut(s)	978
BstSNI	TACGTA	1 cut(s)	1004
BstUI	CGCG	3 cut(s)	127, 129, 551
BstV1I	GCAGC	1 cut(s)	949
BstV2I	GAAGAC	1 cut(s)	711
BstX2I	RGATCY	1 cut(s)	151
BstXI	CCANNNNNNTGG	1 cut(s)	635
BstYI	RGATCY	1 cut(s)	151
BsuRI	GGCC	4 cut(s)	5, 393, 935, 948
BtgI	CCRYGG	1 cut(s)	762
BtsCI	GGATG	3 cut(s)	407, 420, 529
BtsI	GCAGTG	1 cut(s)	618
BtsIMutI	CAGTG	1 cut(s)	618
Cac8I	GCNNGC	3 cut(s)	317, 712, 933
CaiI	CAGNNNCTG	1 cut(s)	491
CfoI	GCGC	3 cut(s)	129, 177, 451
Cfr10I	RCCGGY	3 cut(s)	504, 931, 948
Cfr13I	GGNCC	3 cut(s)	55, 392, 946
Cfr9I	CCCGGG	1 cut(s)	394
CseI	GACGC	1 cut(s)	557
Csp6I	GTAC	6 cut(s)	105, 181, 289, 346, 775, 1001
CspAI	ACCGGT	1 cut(s)	504
CviAII	CATG	3 cut(s)	359, 517, 763
CviQI	GTAC	6 cut(s)	105, 181, 289, 346, 775, 1001
DdeI	CTNAG	4 cut(s)	61, 656, 705, 927
DpnI	GATC	4 cut(s)	122, 153, 443, 909
DpnII	GATC	4 cut(s)	120, 151, 441, 907
DraI	TTTAAA	2 cut(s)	501, 799
DrdI	GACNNNNNNGTC	1 cut(s)	107
DseDI	GACNNNNNNGTC	1 cut(s)	107
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	257, 634
EarI	CTCTTC	2 cut(s)	257, 634
EciI	GGCGGA	2 cut(s)	261, 896
Eco105I	TACGTA	1 cut(s)	1004
Eco130I	CCWWGG	1 cut(s)	762
Eco31I	GGTCTC	1 cut(s)	979
Eco47I	GGWCC	1 cut(s)	55
Eco47III	AGCGCT	1 cut(s)	450
Eco72I	CACGTG	2 cut(s)	191, 384
Eco88I	CYCGRG	1 cut(s)	394
EcoRII	CCWGG	1 cut(s)	743
EcoT14I	CCWWGG	1 cut(s)	762
ErhI	CCWWGG	1 cut(s)	762
Esp3I	CGTCTC	1 cut(s)	13
FaeI	CATG	3 cut(s)	362, 520, 766
FaiI	YATR	8 cut(s)	53, 114, 167, 169, 360, 518, 675, 764
FalI	AAGNNNNNCTT	4 cut(s)	458, 490, 703, 735
FaqI	GGGAC	3 cut(s)	416, 514, 560
FatI	CATG	3 cut(s)	358, 516, 762
FblI	GTMKAC	1 cut(s)	195
Fnu4HI	GCNGC	2 cut(s)	329, 963
FokI	GGATG	3 cut(s)	394, 407, 536
Fsp4HI	GCNGC	2 cut(s)	329, 963
FspAI	RTGCGCAY	1 cut(s)	176
FspI	TGCGCA	1 cut(s)	176
GlaI	GCGC	3 cut(s)	128, 176, 450
GluI	GCNGC	2 cut(s)	329, 963
HaeII	RGCGCY	1 cut(s)	452
HaeIII	GGCC	4 cut(s)	5, 393, 935, 948
HapII	CCGG	8 cut(s)	158, 275, 395, 505, 830, 932, 944, 949
HgaI	GACGC	1 cut(s)	557
HhaI	GCGC	3 cut(s)	129, 177, 451
Hin1I	GRCGYC	1 cut(s)	45
Hin1II	CATG	3 cut(s)	362, 520, 766
Hin6I	GCGC	3 cut(s)	127, 175, 449
HinP1I	GCGC	3 cut(s)	127, 175, 449
HincII	GTYRAC	3 cut(s)	16, 196, 573
HindII	GTYRAC	3 cut(s)	16, 196, 573
HinfI	GANTC	6 cut(s)	185, 249, 404, 527, 652, 758
HpaII	CCGG	8 cut(s)	158, 275, 395, 505, 830, 932, 944, 949
Hpy166II	GTNNAC	4 cut(s)	16, 196, 573, 727
Hpy188I	TCNGA	6 cut(s)	64, 79, 221, 590, 657, 852
Hpy188III	TCNNGA	1 cut(s)	816
Hpy8I	GTNNAC	4 cut(s)	16, 196, 573, 727
Hpy99I	CGWCG	3 cut(s)	31, 50, 898
HpyAV	CCTTC	3 cut(s)	142, 221, 514
HpyCH4III	ACNGT	4 cut(s)	27, 83, 104, 109
HpyCH4IV	ACGT	8 cut(s)	45, 171, 179, 190, 383, 563, 575, 1003
HpyCH4V	TGCA	3 cut(s)	567, 666, 965
HpyF10VI	GCNNNNNNNGC	4 cut(s)	325, 620, 693, 932
HpyF3I	CTNAG	4 cut(s)	61, 656, 705, 927
HpySE526I	ACGT	8 cut(s)	45, 171, 179, 190, 383, 563, 575, 1003
Hsp92I	GRCGYC	1 cut(s)	45
Hsp92II	CATG	3 cut(s)	362, 520, 766
HspAI	GCGC	3 cut(s)	127, 175, 449
KroI	GCCGGC	1 cut(s)	931
KroNI	GCCGGC	1 cut(s)	933
Kzo9I	GATC	4 cut(s)	120, 151, 441, 907
LguI	GCTCTTC	1 cut(s)	634
LmnI	GCTCC	3 cut(s)	221, 591, 766
Lsp1109I	GCAGC	1 cut(s)	949
MaeII	ACGT	8 cut(s)	45, 171, 179, 190, 383, 563, 575, 1003
MaeIII	GTNAC	1 cut(s)	186
MalI	GATC	4 cut(s)	122, 153, 443, 909
MbiI	CCGCTC	1 cut(s)	315
MboI	GATC	4 cut(s)	120, 151, 441, 907
MboII	GAAGA	8 cut(s)	130, 244, 247, 250, 651, 711, 928, 931
MflI	RGATCY	1 cut(s)	151
MluCI	AATT	4 cut(s)	138, 604, 839, 872
MluI	ACGCGT	1 cut(s)	549
MlyI	GAGTC	5 cut(s)	194, 243, 398, 536, 767
MmeI	TCCRAC	1 cut(s)	199
MnlI	CCTC	7 cut(s)	209, 235, 434, 604, 700, 784, 802
MroNI	GCCGGC	1 cut(s)	931
MseI	TTAA	4 cut(s)	333, 477, 500, 798
MslI	CAYNNNNRTG	1 cut(s)	170
MspA1I	CMGCKG	2 cut(s)	784, 962
MspI	CCGG	8 cut(s)	158, 275, 395, 505, 830, 932, 944, 949
MspR9I	CCNGG	6 cut(s)	158, 275, 395, 396, 745, 945
MvaI	CCWGG	1 cut(s)	745
MvnI	CGCG	3 cut(s)	127, 129, 551
MwoI	GCNNNNNNNGC	4 cut(s)	325, 620, 693, 932
NaeI	GCCGGC	1 cut(s)	933
NciI	CCSGG	5 cut(s)	158, 275, 395, 396, 945
NcoI	CCATGG	1 cut(s)	762
NdeII	GATC	4 cut(s)	120, 151, 441, 907
NgoMIV	GCCGGC	1 cut(s)	931
NlaIII	CATG	3 cut(s)	362, 520, 766
NmuCI	GTSAC	1 cut(s)	186
NsbI	TGCGCA	1 cut(s)	176
NspI	RCATGY	1 cut(s)	362
PciI	ACATGT	1 cut(s)	358
PciSI	GCTCTTC	1 cut(s)	634
PdiI	GCCGGC	1 cut(s)	933
PfeI	GAWTC	1 cut(s)	652
Pfl23II	CGTACG	2 cut(s)	180, 288
PflFI	GACNNNGTC	1 cut(s)	200
PflMI	CCANNNNNTGG	2 cut(s)	433, 491
PfoI	TCCNGGA	3 cut(s)	156, 273, 743
PinAI	ACCGGT	1 cut(s)	504
PkrI	GCNGC	2 cut(s)	330, 964
PleI	GAGTC	5 cut(s)	193, 243, 398, 535, 766
PmaCI	CACGTG	2 cut(s)	191, 384
PmlI	CACGTG	2 cut(s)	191, 384
PpsI	GAGTC	5 cut(s)	193, 243, 398, 535, 766
Ppu21I	YACGTR	5 cut(s)	172, 180, 191, 384, 1004
PscI	ACATGT	1 cut(s)	358
Psp1406I	AACGTT	1 cut(s)	575
Psp6I	CCWGG	1 cut(s)	743
PspCI	CACGTG	2 cut(s)	191, 384
PspGI	CCWGG	1 cut(s)	743
PspLI	CGTACG	2 cut(s)	180, 288
PspPI	GGNCC	3 cut(s)	55, 392, 946
PstNI	CAGNNNCTG	1 cut(s)	491
PsuI	RGATCY	1 cut(s)	151
PsyI	GACNNNGTC	1 cut(s)	200
PvuII	CAGCTG	1 cut(s)	784
RsaI	GTAC	6 cut(s)	106, 182, 290, 347, 776, 1002
RsaNI	GTAC	6 cut(s)	105, 181, 289, 346, 775, 1001
RseI	CAYNNNNRTG	1 cut(s)	170
SalI	GTCGAC	1 cut(s)	194
SapI	GCTCTTC	1 cut(s)	634
SaqAI	TTAA	4 cut(s)	333, 477, 500, 798
SatI	GCNGC	2 cut(s)	329, 963
Sau3AI	GATC	4 cut(s)	120, 151, 441, 907
Sau96I	GGNCC	3 cut(s)	55, 392, 946
SchI	GAGTC	5 cut(s)	194, 243, 398, 536, 767
ScrFI	CCNGG	6 cut(s)	158, 275, 395, 396, 745, 945
SfcI	CTRYAG	1 cut(s)	978
SinI	GGWCC	1 cut(s)	55
SmaI	CCCGGG	1 cut(s)	396
SmiMI	CAYNNNNRTG	1 cut(s)	170
SmlI	CTYRAG	1 cut(s)	367
SmoI	CTYRAG	1 cut(s)	367
SnaBI	TACGTA	1 cut(s)	1004
Sse9I	AATT	4 cut(s)	138, 604, 839, 872
SsiI	CCGC	5 cut(s)	246, 313, 328, 881, 960
StyD4I	CCNGG	6 cut(s)	156, 273, 393, 394, 743, 943
StyI	CCWWGG	1 cut(s)	762
TaaI	ACNGT	4 cut(s)	27, 83, 104, 109
TaiI	ACGT	8 cut(s)	48, 174, 182, 193, 386, 566, 578, 1006
TaqI	TCGA	5 cut(s)	195, 261, 440, 817, 893
TasI	AATT	4 cut(s)	138, 604, 839, 872
TauI	GCSGC	1 cut(s)	331
TfiI	GAWTC	1 cut(s)	652
Tru1I	TTAA	4 cut(s)	333, 477, 500, 798
Tru9I	TTAA	4 cut(s)	333, 477, 500, 798
TscAI	CASTG	1 cut(s)	625
TseFI	GTSAC	1 cut(s)	186
TseI	GCWGC	1 cut(s)	962
Tsp45I	GTSAC	1 cut(s)	186
TspDTI	ATGAA	4 cut(s)	85, 296, 495, 533
TspGWI	ACGGA	3 cut(s)	276, 336, 712
TspMI	CCCGGG	1 cut(s)	394
TspRI	CASTG	1 cut(s)	625
Tth111I	GACNNNGTC	1 cut(s)	200
Van91I	CCANNNNNTGG	2 cut(s)	433, 491
VpaK11BI	GGWCC	1 cut(s)	55
XapI	RAATTY	3 cut(s)	138, 604, 839
XceI	RCATGY	1 cut(s)	362
XcmI	CCANNNNNNNNNTGG	1 cut(s)	539
XmaI	CCCGGG	1 cut(s)	394
XmiI	GTMKAC	1 cut(s)	195
ZraI	GACGTC	1 cut(s)	46

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.