Rorug04G0203800

Belongs to the ubiquitin-conjugating enzyme family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
35422484 .. 35428312
5829 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0203800.1

Sequence Viewer

Length: 2610 bp
ATGCAACCTTGGATCTATGAGCATGTTGCTGCATCAACCAATAAGGAAGTTGATGCCCATATTCCCAATTACCCAAACCTGCCTCCACAACTAATTTGTCAACTTCACAATGTGACTATGCATGCCGATGTGGAGACGGATGAAGTATATGCTCAAATGACCCTGCAACCATTAAGTCCGCAAGAGCAAAAGGATGTATACCTAATGCCTGCAGAGTTGGGCAATCCCAGCAAACAGCCAACCAACTATTTCTGTAAAACTTTGACCGCAAGTGATACTAGCACGCATGGAGGATTTTCTGTTCCCCGCCGGGCAGCTGAAAAAGTCTTTCCTCCTCTTGATTACTCACAGCAGCCCCCAGCACAGGAACTAATTGCAAGGGATCTTCATGATAATGAATGGAAATTCAGACATATATTTCGAGGCCAGCCCAAGAGGCATCTTCTCACAACAGGATGGAGCGTGTTTGTTAGTGCTAAACGACTTGTTGCCGGTGATTCTGTCCTTTTTATTTGGAATGAAAAGAATCAGTTGCTCTTGGGTATTCGGAGAGCAAATCGTCCACAGACTGTTATGCCGTCGTCGGTTTTATCAAGCGATAGCATGCATATTGGTCTTCTTGCTGCTGCTGCTCATGCAGCTGCAACAAATAGTCGGTTTACTATATTTTATAATCCAAGAGCAAGTCCTTCTGAATTTGTGATACCCCTGGCCAAGTATGTTAAAGCTGTCTATCATACACGTGTTTCTGTGGGAATGCGATTTAGGATGCTGTTTGAGACAGAAGAATCAAGTGTTCGCCGATACATGGGTACAATAACTGGCATCAGTGATTTAGATTCTGTTCGCTGGTCAAATTCACACTGGCGCTCTGTGAAGGTTGGCTGGGATGAATCCACTGCAGGGGAGAGGCAGCCAAGAGTTTCATTGTGGGAGATTGAACCGCTAACAACTTTTCCCATGTACCCTTCCCCATTCCCTCTCAGACTGAAGCGACCATGGCCATCTGGCATGCCCTCTTTCCATGCACTCAAAGACGGTGATATGGGCATGAATGCGCCACTGATGTGGCTCCAAGGAGGGGTTGGAGATCCAGGGATGCAATCTTTGAACTTCCAGGGATTTGGGGTTACGCCTTGGATGCAGCCACGGCTTGATGCTTCTATGGCAGGCCTACAACCTGATGTATACCAAGCAATGGCAGCTGCTGCACTTCAAGAAATGAGGGCAGTGGATGCAAAATGTTCTTCACAGTCGCTTCTACCCTTCCAGCAATCTTCAAATGTTTCAAATGGGCCTGCTGCTATGCTTCAGAGACATAGTTTACCTCATTCTCAGTCTCAGAATACTTTTCTCCAGAGCTTTCAAGAAAACCAAGCTCCTGCTTCTCAGCTGTTGCAACAACAGTTGCGTTATCATCCATATAATAATGATCAGAGGCAGCAGCAGCAGCAGCAGCATCAACAGCAGCTGCACCAGCACCAGCACCAGCAACAACAGCAACAGCTTCAACAGCAGCATCTTCAACAATCCCAGAATATGCACCAATTTTCTGTTCAGCAGCAGATTCCCAATGTAATGTCTTCTCTATCTAATTTTCCTACTCAATCTCAGTCTGCATCACTACAAGCTATTCCTTCACAAACTCAGCAGCAGAGCTTTCCCGAATCTGTTGGAAATGCTATATCTTCATCCGATGTTCCCCCTATACATAGCATATTAGGTTCACTATCACAGGATGGAGCATCCCAGTTACTTAACTTGAGTGGATCCAACACTGGAATATCTTCTACTTTGTTACCCAAGGTTGAATCACAGCTATCATCTGGAGCTGCTCAATGTGTACTCCCCCAAGTGGATCAGTTGGGAACACCACAGTCAAATATCTCCAAGCTCACTGCCTTGCCTCCATTTCCTGGCAGAGAGTACTCTTTCCAAGGTGCTACTGATCCCCAGAGCAATCTATTGTTTGGGGTTAACATTGATGCCTCATCTCTAATGCTACAGAATGGGATACCAAATCTGAGAAATATTGGCAGTGGAACTGATTCATTGTCTATGCTGTTCGGTGCTTCAAATTATACCAGTGCTACAGGCAATGATTATCCACTTAATTCAGATATGACTACTTCAAGTTGTGTAGATGAATCAGGCTTCTTGCAGTCTTCAGAAAATGTGGACCAAGTTAATCCACCAACTCGAACCTTTGTGAAGGTTCATAAGTCGGGGTCCTTTGGGAGGTCACTGGATATTTCAAAATTCAGCAGCTACGATGAGCTGCGCAGTGAGCTCGGAAGCATGTTTGGCCTTGAAGGCCAATTAGAGGATCCTCAGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGGGAGAATGATGTTCTTCTTCTTGGTGACGACCCTTGGCAGGAGTTTGTGAACAATGTTTGGTATATCAAGATACTTTCTCCGCTTGAAGTGCAACAAATGGGAAAGGAAGGCCTCAATCGTGTGGCTTCTGTCCCAAGCCAAAAGCTTTCCAATGGCAGCAATACATGTGATGACTACGTGAGCCGACAGGACTTGAGAAACTCAAGCAATGGGATTGCATCGCTGGGCTCCCTTGACTACTAA

Protein Analysis

869

Amino Acids

96.52

Weight (kDa)

6.0

Isoelectric Point (pI)

64.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 84 - 186 1.9e-22 B3 DNA binding domain
ARF_AD PF06507 233 - 316 1.7e-33 Auxin response factor ancillary domain
AUX_IAA PF02309 727 - 816 1.5e-06 AUX/IAA family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 672
Acc16I TGCGCA 1 cut(s) 2282
Acc36I ACCTGC 1 cut(s) 87
AccB7I CCANNNNNTGG 2 cut(s) 1198, 1916
AccI GTMKAC 2 cut(s) 198, 1188
AciI CCGC 5 cut(s) 179, 267, 307, 944, 2447
AclWI GGATC 9 cut(s) 20, 390, 1085, 1764, 1777, 1866, 1943, 2321, 2334
AcoI YGGCCR 2 cut(s) 711, 1001
AcsI RAATTY 4 cut(s) 404, 695, 856, 2258
AcuI CTGAAG 3 cut(s) 1010, 1295, 2151
AcvI CACGTG 1 cut(s) 743
AdeI CACNNNGTG 1 cut(s) 112
AfaI GTAC 4 cut(s) 814, 965, 1845, 1928
AflIII ACRYGT 3 cut(s) 740, 742, 2531
AjnI CCWGG 4 cut(s) 708, 1093, 1116, 1915
AjuI GAANNNNNNNTTGG 2 cut(s) 1539, 1571
AleI CACNNNNGTG 1 cut(s) 1066
AloI GAACNNNNNNTCC 2 cut(s) 285, 317
Alw21I GWGCWC 1 cut(s) 2292
Alw26I GTCTC 4 cut(s) 128, 773, 1309, 1344
AlwI GGATC 9 cut(s) 20, 390, 1085, 1764, 1777, 1866, 1943, 2321, 2334
AlwNI CAGNNNCTG 2 cut(s) 1208, 1471
AoxI GGCC 8 cut(s) 424, 711, 1001, 1171, 1295, 2305, 2314, 2476
ApoI RAATTY 4 cut(s) 404, 695, 856, 2258
ArsI GACNNNNNNTTYG 2 cut(s) 402, 434
Asp700I GAANNNNTTC 2 cut(s) 1786, 2047
AspLEI GCGC 3 cut(s) 870, 1060, 2283
AspS9I GGNCC 3 cut(s) 1295, 2179, 2229
AsuC2I CCSGG 2 cut(s) 311, 2366
AsuHPI GGTGA 3 cut(s) 506, 1052, 2402
AvaII GGWCC 2 cut(s) 2179, 2229
BaeI ACNNNNGTAYC 2 cut(s) 796, 829
BalI TGGCCA 2 cut(s) 713, 1003
BamHI GGATCC 2 cut(s) 1769, 2326
BanII GRGCYC 2 cut(s) 2292, 2597
BbrPI CACGTG 1 cut(s) 743
BbsI GAAGAC 3 cut(s) 608, 1575, 2157
Bbv12I GWGCWC 1 cut(s) 2292
BccI CCATC 3 cut(s) 450, 1012, 1733
BceAI ACGGC 2 cut(s) 562, 1166
BcgI CGANNNNNNTGC 2 cut(s) 2272, 2306
BciT130I CCWGG 4 cut(s) 710, 1095, 1118, 1917
BciVI GTATCC 1 cut(s) 2007
BclI TGATCA 1 cut(s) 1432
BcnI CCSGG 2 cut(s) 311, 2366
BcoDI GTCTC 4 cut(s) 128, 773, 1309, 1344
BfaI CTAG 1 cut(s) 279
BfmI CTRYAG 4 cut(s) 210, 900, 2003, 2091
BfoI RGCGCY 1 cut(s) 871
BfuAI ACCTGC 1 cut(s) 87
BfuI GTATCC 1 cut(s) 2007
BglI GCCNNNNNGGC 2 cut(s) 436, 2313
BmcAI AGTACT 1 cut(s) 1928
Bme1390I CCNGG 6 cut(s) 311, 710, 1095, 1118, 1917, 2366
Bme18I GGWCC 2 cut(s) 2179, 2229
BmgT120I GGNCC 3 cut(s) 1295, 2179, 2229
BmiI GGNNCC 5 cut(s) 1073, 1771, 2230, 2328, 2596
BmrFI CCNGG 6 cut(s) 311, 710, 1095, 1118, 1917, 2366
BmrI ACTGGG 1 cut(s) 1744
BmuI ACTGGG 1 cut(s) 1744
BpiI GAAGAC 3 cut(s) 608, 1575, 2157
BpmI CTGGAG 2 cut(s) 1340, 1848
BpuEI CTTGAG 3 cut(s) 1783, 2554, 2581
BpuMI CCSGG 2 cut(s) 311, 2366
BsaAI YACGTR 2 cut(s) 743, 2545
Bse118I RCCGGY 1 cut(s) 491
Bse1I ACTGG 6 cut(s) 826, 869, 1750, 1783, 2085, 2250
Bse3DI GCAATG 3 cut(s) 1203, 2104, 2581
BseBI CCWGG 4 cut(s) 710, 1095, 1118, 1917
BseMI GCAATG 3 cut(s) 1203, 2104, 2581
BseMII CTCAG 8 cut(s) 997, 1349, 1355, 1403, 1625, 1661, 2015, 2345
BseNI ACTGG 6 cut(s) 826, 869, 1750, 1783, 2085, 2250
BseRI GAGGAG 1 cut(s) 324
BseYI CCCAGC 4 cut(s) 227, 358, 885, 2590
BsgI GTGCAG 2 cut(s) 1194, 1457
BshFI GGCC 8 cut(s) 426, 713, 1003, 1173, 1297, 2307, 2316, 2478
BsiHKAI GWGCWC 1 cut(s) 2292
BsiSI CCGG 3 cut(s) 310, 492, 2365
BslFI GGGAC 1 cut(s) 2483
BsmAI GTCTC 4 cut(s) 128, 773, 1309, 1344
BsmBI CGTCTC 1 cut(s) 128
BsmFI GGGAC 1 cut(s) 2483
BsmI GAATGC 2 cut(s) 762, 1060
BsnI GGCC 8 cut(s) 426, 713, 1003, 1173, 1297, 2307, 2316, 2478
Bsp1286I GDGCHC 2 cut(s) 2292, 2597
Bsp143I GATC 9 cut(s) 12, 382, 1090, 1432, 1769, 1858, 1948, 2326, 2336
Bsp19I CCATGG 1 cut(s) 998
BspACI CCGC 5 cut(s) 179, 267, 307, 944, 2447
BspANI GGCC 8 cut(s) 426, 713, 1003, 1173, 1297, 2307, 2316, 2478
BspCNI CTCAG 8 cut(s) 996, 1348, 1354, 1402, 1624, 1660, 2016, 2344
BspHI TCATGA 1 cut(s) 388
BspLI GGNNCC 5 cut(s) 1073, 1771, 2230, 2328, 2596
BspMAI CTGCAG 2 cut(s) 214, 904
BspMI ACCTGC 1 cut(s) 87
BspPI GGATC 9 cut(s) 20, 390, 1085, 1764, 1777, 1866, 1943, 2321, 2334
BsrDI GCAATG 3 cut(s) 1203, 2104, 2581
BsrFI RCCGGY 1 cut(s) 491
BsrI ACTGG 6 cut(s) 826, 869, 1750, 1783, 2085, 2250
BssAI RCCGGY 1 cut(s) 491
BssMI GATC 9 cut(s) 12, 382, 1090, 1432, 1769, 1858, 1948, 2326, 2336
BssNAI GTATAC 2 cut(s) 199, 1189
BssT1I CCWWGG 7 cut(s) 8, 998, 1075, 1136, 1803, 1936, 2399
Bst1107I GTATAC 2 cut(s) 199, 1189
Bst2UI CCWGG 4 cut(s) 710, 1095, 1118, 1917
Bst4CI ACNGT 5 cut(s) 571, 1040, 1254, 1407, 1878
BstAPI GCANNNNNTGC 2 cut(s) 1208, 1235
BstBAI YACGTR 2 cut(s) 743, 2545
BstC8I GCNNGC 9 cut(s) 123, 210, 284, 428, 605, 1013, 1171, 1299, 2345
BstDEI CTNAG 8 cut(s) 983, 1335, 1341, 1389, 1611, 1647, 2024, 2331
BstDSI CCRYGG 2 cut(s) 998, 1148
BstENI CCTNNNNNAGG 1 cut(s) 2236
BstH2I RGCGCY 1 cut(s) 871
BstHHI GCGC 3 cut(s) 870, 1060, 2283
BstKTI GATC 9 cut(s) 15, 385, 1093, 1435, 1772, 1861, 1951, 2329, 2339
BstMAI GTCTC 4 cut(s) 128, 773, 1309, 1344
BstMBI GATC 9 cut(s) 12, 382, 1090, 1432, 1769, 1858, 1948, 2326, 2336
BstNI CCWGG 4 cut(s) 710, 1095, 1118, 1917
BstNSI RCATGY 6 cut(s) 26, 125, 607, 1015, 2302, 2535
BstSCI CCNGG 6 cut(s) 309, 708, 1093, 1116, 1915, 2364
BstSFI CTRYAG 4 cut(s) 210, 900, 2003, 2091
BstV2I GAAGAC 3 cut(s) 608, 1575, 2157
BstX2I RGATCY 5 cut(s) 12, 382, 1090, 1769, 2326
BstXI CCANNNNNNTGG 2 cut(s) 1068, 1124
BstYI RGATCY 5 cut(s) 12, 382, 1090, 1769, 2326
BstZ17I GTATAC 2 cut(s) 199, 1189
BsuI GTATCC 1 cut(s) 2007
BsuRI GGCC 8 cut(s) 426, 713, 1003, 1173, 1297, 2307, 2316, 2478
BtgI CCRYGG 2 cut(s) 998, 1148
BtgZI GCGATG 1 cut(s) 2571
BtsI GCAGTG 5 cut(s) 897, 1236, 1896, 2044, 2290
BveI ACCTGC 1 cut(s) 87
Cac8I GCNNGC 9 cut(s) 123, 210, 284, 428, 605, 1013, 1171, 1299, 2345
CaiI CAGNNNCTG 2 cut(s) 1208, 1471
CciI TCATGA 1 cut(s) 388
CfoI GCGC 3 cut(s) 870, 1060, 2283
Cfr10I RCCGGY 1 cut(s) 491
Cfr13I GGNCC 3 cut(s) 1295, 2179, 2229
Csp6I GTAC 4 cut(s) 813, 964, 1844, 1927
CviQI GTAC 4 cut(s) 813, 964, 1844, 1927
DdeI CTNAG 8 cut(s) 983, 1335, 1341, 1389, 1611, 1647, 2024, 2331
DpnI GATC 9 cut(s) 14, 384, 1092, 1434, 1771, 1860, 1950, 2328, 2338
DpnII GATC 9 cut(s) 12, 382, 1090, 1432, 1769, 1858, 1948, 2326, 2336
DraIII CACNNNGTG 1 cut(s) 112
EaeI YGGCCR 2 cut(s) 711, 1001
Ecl136II GAGCTC 1 cut(s) 2290
Eco130I CCWWGG 7 cut(s) 8, 998, 1075, 1136, 1803, 1936, 2399
Eco147I AGGCCT 2 cut(s) 1173, 2478
Eco24I GRGCYC 2 cut(s) 2292, 2597
Eco47I GGWCC 2 cut(s) 2179, 2229
Eco53kI GAGCTC 1 cut(s) 2290
Eco57I CTGAAG 3 cut(s) 1010, 1295, 2151
Eco72I CACGTG 1 cut(s) 743
EcoICRI GAGCTC 1 cut(s) 2290
EcoNI CCTNNNNNAGG 1 cut(s) 2236
EcoO109I RGGNCCY 1 cut(s) 2229
EcoRII CCWGG 4 cut(s) 708, 1093, 1116, 1915
EcoT14I CCWWGG 7 cut(s) 8, 998, 1075, 1136, 1803, 1936, 2399
EcoT22I ATGCAT 2 cut(s) 123, 609
EcoT38I GRGCYC 2 cut(s) 2292, 2597
ErhI CCWWGG 7 cut(s) 8, 998, 1075, 1136, 1803, 1936, 2399
Esp3I CGTCTC 1 cut(s) 128
FaqI GGGAC 1 cut(s) 2483
FauI CCCGC 1 cut(s) 314
FbaI TGATCA 1 cut(s) 1432
FblI GTMKAC 2 cut(s) 198, 1188
FriOI GRGCYC 2 cut(s) 2292, 2597
FspBI CTAG 1 cut(s) 279
FspI TGCGCA 1 cut(s) 2282
GlaI GCGC 3 cut(s) 869, 1059, 2282
GsaI CCCAGC 4 cut(s) 231, 362, 889, 2594
GsuI CTGGAG 2 cut(s) 1340, 1848
HaeII RGCGCY 1 cut(s) 871
HaeIII GGCC 8 cut(s) 426, 713, 1003, 1173, 1297, 2307, 2316, 2478
HapII CCGG 3 cut(s) 310, 492, 2365
HhaI GCGC 3 cut(s) 870, 1060, 2283
Hin6I GCGC 3 cut(s) 868, 1058, 2281
HinP1I GCGC 3 cut(s) 868, 1058, 2281
HincII GTYRAC 3 cut(s) 101, 1978, 2362
HindII GTYRAC 3 cut(s) 101, 1978, 2362
HindIII AAGCTT 1 cut(s) 2510
HpaI GTTAAC 1 cut(s) 1978
HpaII CCGG 3 cut(s) 310, 492, 2365
HphI GGTGA 3 cut(s) 506, 1052, 2402
Hpy188III TCNNGA 8 cut(s) 338, 389, 1217, 1357, 1367, 1664, 1827, 2434
Hpy99I CGWCG 2 cut(s) 583, 586
HpyAV CCTTC 8 cut(s) 699, 871, 978, 1276, 1647, 2206, 2306, 2468
HpyCH4III ACNGT 5 cut(s) 571, 1040, 1254, 1407, 1878
HpyCH4IV ACGT 2 cut(s) 742, 2544
HpyF3I CTNAG 8 cut(s) 983, 1335, 1341, 1389, 1611, 1647, 2024, 2331
HpySE526I ACGT 2 cut(s) 742, 2544
HspAI GCGC 3 cut(s) 868, 1058, 2281
Ksp22I TGATCA 1 cut(s) 1432
KspAI GTTAAC 1 cut(s) 1978
Kzo9I GATC 9 cut(s) 12, 382, 1090, 1432, 1769, 1858, 1948, 2326, 2336
LmnI GCTCC 6 cut(s) 459, 1077, 1384, 1742, 1829, 2600
MaeI CTAG 1 cut(s) 279
MaeII ACGT 2 cut(s) 742, 2544
MaeIII GTNAC 6 cut(s) 112, 1129, 1752, 1797, 2241, 2390
MalI GATC 9 cut(s) 14, 384, 1092, 1434, 1771, 1860, 1950, 2328, 2338
MboI GATC 9 cut(s) 12, 382, 1090, 1432, 1769, 1858, 1948, 2326, 2336
MflI RGATCY 5 cut(s) 12, 382, 1090, 1769, 2326
MhlI GDGCHC 2 cut(s) 2292, 2597
MlsI TGGCCA 2 cut(s) 713, 1003
MluNI TGGCCA 2 cut(s) 713, 1003
MmeI TCCRAC 3 cut(s) 1066, 1654, 1797
Mox20I TGGCCA 2 cut(s) 713, 1003
Mph1103I ATGCAT 2 cut(s) 123, 609
MroXI GAANNNNTTC 2 cut(s) 1786, 2047
MscI TGGCCA 2 cut(s) 713, 1003
MseI TTAA 6 cut(s) 173, 723, 1758, 1977, 2112, 2187
MslI CAYNNNNRTG 4 cut(s) 126, 393, 741, 1066
Msp20I TGGCCA 2 cut(s) 713, 1003
MspA1I CMGCKG 5 cut(s) 317, 641, 1205, 1393, 1471
MspI CCGG 3 cut(s) 310, 492, 2365
MspR9I CCNGG 6 cut(s) 311, 710, 1095, 1118, 1917, 2366
Mva1269I GAATGC 2 cut(s) 762, 1060
MvaI CCWGG 4 cut(s) 710, 1095, 1118, 1917
NciI CCSGG 2 cut(s) 311, 2366
NcoI CCATGG 1 cut(s) 998
NdeII GATC 9 cut(s) 12, 382, 1090, 1432, 1769, 1858, 1948, 2326, 2336
NlaIV GGNNCC 5 cut(s) 1073, 1771, 2230, 2328, 2596
NmuCI GTSAC 3 cut(s) 112, 2241, 2390
NsbI TGCGCA 1 cut(s) 2282
NsiI ATGCAT 2 cut(s) 123, 609
NspI RCATGY 6 cut(s) 26, 125, 607, 1015, 2302, 2535
OliI CACNNNNGTG 1 cut(s) 1066
PaeI GCATGC 3 cut(s) 125, 607, 1015
PagI TCATGA 1 cut(s) 388
PceI AGGCCT 2 cut(s) 1173, 2478
PciI ACATGT 1 cut(s) 2531
PctI GAATGC 2 cut(s) 762, 1060
PdmI GAANNNNTTC 2 cut(s) 1786, 2047
PflMI CCANNNNNTGG 2 cut(s) 1198, 1916
PmaCI CACGTG 1 cut(s) 743
PmlI CACGTG 1 cut(s) 743
Ppu21I YACGTR 2 cut(s) 743, 2545
PpuMI RGGWCCY 1 cut(s) 2229
PscI ACATGT 1 cut(s) 2531
PsiI TTATAA 1 cut(s) 672
Psp124BI GAGCTC 1 cut(s) 2292
Psp5II RGGWCCY 1 cut(s) 2229
Psp6I CCWGG 4 cut(s) 708, 1093, 1116, 1915
PspCI CACGTG 1 cut(s) 743
PspFI CCCAGC 4 cut(s) 227, 358, 885, 2590
PspGI CCWGG 4 cut(s) 708, 1093, 1116, 1915
PspN4I GGNNCC 5 cut(s) 1073, 1771, 2230, 2328, 2596
PspPI GGNCC 3 cut(s) 1295, 2179, 2229
PspPPI RGGWCCY 1 cut(s) 2229
PstI CTGCAG 2 cut(s) 214, 904
PstNI CAGNNNCTG 2 cut(s) 1208, 1471
PsuI RGATCY 5 cut(s) 12, 382, 1090, 1769, 2326
PvuII CAGCTG 5 cut(s) 317, 641, 1205, 1393, 1471
RsaI GTAC 4 cut(s) 814, 965, 1845, 1928
RsaNI GTAC 4 cut(s) 813, 964, 1844, 1927
RseI CAYNNNNRTG 4 cut(s) 126, 393, 741, 1066
SacI GAGCTC 1 cut(s) 2292
SaqAI TTAA 6 cut(s) 173, 723, 1758, 1977, 2112, 2187
Sau3AI GATC 9 cut(s) 12, 382, 1090, 1432, 1769, 1858, 1948, 2326, 2336
Sau96I GGNCC 3 cut(s) 1295, 2179, 2229
ScaI AGTACT 1 cut(s) 1928
ScrFI CCNGG 6 cut(s) 311, 710, 1095, 1118, 1917, 2366
SduI GDGCHC 2 cut(s) 2292, 2597
SfcI CTRYAG 4 cut(s) 210, 900, 2003, 2091
SfiI GGCCNNNNNGGCC 1 cut(s) 2313
SinI GGWCC 2 cut(s) 2179, 2229
SmiMI CAYNNNNRTG 4 cut(s) 126, 393, 741, 1066
SmlI CTYRAG 3 cut(s) 1762, 2560, 2569
SmoI CTYRAG 3 cut(s) 1762, 2560, 2569
SphI GCATGC 3 cut(s) 125, 607, 1015
SseBI AGGCCT 2 cut(s) 1173, 2478
SsiI CCGC 5 cut(s) 179, 267, 307, 944, 2447
SspI AATATT 1 cut(s) 2032
SspMI CTAG 1 cut(s) 279
SstI GAGCTC 1 cut(s) 2292
StuI AGGCCT 2 cut(s) 1173, 2478
StyD4I CCNGG 6 cut(s) 309, 708, 1093, 1116, 1915, 2364
StyI CCWWGG 7 cut(s) 8, 998, 1075, 1136, 1803, 1936, 2399
TaaI ACNGT 5 cut(s) 571, 1040, 1254, 1407, 1878
TaiI ACGT 2 cut(s) 745, 2547
TaqI TCGA 2 cut(s) 421, 2200
TatI WGTACW 2 cut(s) 1843, 1926
Tru1I TTAA 6 cut(s) 173, 723, 1758, 1977, 2112, 2187
Tru9I TTAA 6 cut(s) 173, 723, 1758, 1977, 2112, 2187
TseFI GTSAC 3 cut(s) 112, 2241, 2390
Tsp45I GTSAC 3 cut(s) 112, 2241, 2390
TspGWI ACGGA 1 cut(s) 152
Van91I CCANNNNNTGG 2 cut(s) 1198, 1916
VpaK11BI GGWCC 2 cut(s) 2179, 2229
XagI CCTNNNNNAGG 1 cut(s) 2236
XapI RAATTY 4 cut(s) 404, 695, 856, 2258
XceI RCATGY 6 cut(s) 26, 125, 607, 1015, 2302, 2535
XcmI CCANNNNNNNNNTGG 1 cut(s) 1082
XmiI GTMKAC 2 cut(s) 198, 1188
XmnI GAANNNNTTC 2 cut(s) 1786, 2047
XspI CTAG 1 cut(s) 279
ZrmI AGTACT 1 cut(s) 1928
Zsp2I ATGCAT 2 cut(s) 123, 609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.