Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001900.1

Orthogroup ID

OG0000808

Physical Location & Seq

Genomic Coordinates Reverse (-)

63077 .. 67449

Gene Structure 4373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001900.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

atggcctccgtcaacaccaaaccgtcgttcaagcagtttgacgtcgttatggacccctcagaccaccactactcggacagtaaatgtcgtttcatcgacagtacggtctataagaagatcacgcgcgagtggagaattttggagaaggatctcccggaaaccatatacgtgcgcacgtacgagacacgtgtcgacctcctcagggctgtgattgtcggagcagaaggcacaccctacgagggcggactcttcttcttcgacatcaagttcccggataactatccgaacgcaccaccaaaggttcattaccgctcgcacggattgcggcttaaccctaatctgtacgagactggacatgtttgcttgagcctactcaacacgtggtttggcccggggtgggactcatcccaatccaccatcctccaagttttggtgtcgatccaagcgcttgttctcaacgacaagccttactttaatgaaccgggtactgggtttttcgaccggtggtttggcatgaaggatgagtcccaaaaatacagtggggacgcgtttatttcaacatgcaagtcaacgttgtatttgctcggaaatccacccaagaattttgaggctttcactgccgaccattttcgtggaagagcgagtgggattctgagagcgtgcaaggcttatgcgaaagtcggctattacagcaaggagactgagacaagcccgtcttcggtttaccttgtgaaacattccaggaagttcaaggagtccatggagcagttgtacccacagctggttgaggcttttaaaaagaatgaggcttctcgaaagaacaatccggtcaaggaatttacttctcggaaaaacaatccagtcaaggaattgatggcagagaggagttcgacgaagtttgcagatcaagtgaagaagaaagctaagccggcctttactcctggccgccttacttctctcgcagtcgcagctcactctccccttctccactttagccgcctgaaccctctacccgtctctacgccgccactcttagccggcgctgccaaagagttcgccgacgagctcggcttctttcacttctcgcaactctttcactgttgtcttccatactcgaacatctatgatcatggactcgcccgggccatcaagtccctgaatcaagacgattccgtcggggtcattattctgtcgggtacgggtcgggccttctgctccggcgtccatctcacggcggccgaggacgttttcaaaggcgacgccaaggacatcgagacctctggggccggcggattcgaaatcgccatcgcttgcccgaatccgaattttgttgacggcgacgccgctaacggcggaggtggtgagaggttggggttagtgaaccatgttgtggagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

465

Amino Acids

51.7

Weight (kDa)

8.43

Isoelectric Point (pI)

34.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000808)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g01260 FvH4_4g19890 FvH4_4g19900 FvH4_4g19910 FvH4_4g23111
malus_domestica	MD16G1152700.v1.1
prunus_persica	Prupe.1G115900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0415111 RchiOBHm_Chr4g0421801 RchiOBHm_Chr4g0425521 RchiOBHm_Chr4g0425551
rosa_laevigata	RLG00000007355 RLG00000007357 RLG00000007358 RLG00000007360 RLG00000007361 RLG00000007364 RLG00000007366 RLG00000007640 RLG00000008097 RLG00000022500
rosa_multiflora	Rmu_co8278857.1_g000001 Rmu_sc0000635.1_g000001 Rmu_sc0000709.1_g000009 Rmu_sc0001900.1_g000008 Rmu_sc0001900.1_g000009 Rmu_sc0003748.1_g000014 Rmu_sc0008440.1_g000003 Rmu_sc0010306.1_g000005 Rmu_sc0012856.1_g000010 Rmu_sc0032188.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364100 Rroxscaffold_5G00367460 Rroxscaffold_5G00367480 Rroxscaffold_5G00367490 Rroxscaffold_5G00367510 Rroxscaffold_5G00371110
rosa_rugosa	Rorug04G0176300 Rorug04G0203700 Rorug04G0203800 Rorug04G0203800 Rorug04G0203900 Rorug06G0289400
rosa_samantha	Rh4AG192100 Rh4AG235200 Rh4AG236000 Rh4AG260700 Rh4AG260900 Rh4BG190000 Rh4BG238700 Rh4BG266400 Rh4BG266600 Rh4BG266700 Rh4CG202900 Rh4CG250700 Rh4CG277700 Rh4CG277900 Rh4CG278000 Rh4DG235300 Rh4DG262700 Rh4DG262900 Rh4DG263100 Rh6BG409300 Rh6DG401700
rosa_wichuraiana	Rw4G016340 Rw4G019840 Rw4G022570 Rw4G022580 Rw4G022590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	104, 712, 1172
AatII	GACGTC	1 cut(s)	45
Acc16I	TGCGCA	1 cut(s)	173
AccB7I	CCANNNNNTGG	2 cut(s)	430, 1390
AccBSI	CCGCTC	1 cut(s)	312
AccI	GTMKAC	1 cut(s)	192
AccII	CGCG	3 cut(s)	124, 126, 548
AclI	AACGTT	1 cut(s)	572
AclWI	GGATC	2 cut(s)	156, 433
AcoI	YGGCCR	2 cut(s)	943, 1236
AcsI	RAATTY	4 cut(s)	135, 601, 836, 1324
AcvI	CACGTG	2 cut(s)	188, 381
AcyI	GRCGYC	4 cut(s)	42, 1221, 1260, 1341
AfaI	GTAC	6 cut(s)	103, 179, 344, 487, 773, 1198
AfeI	AGCGCT	1 cut(s)	447
AflIII	ACRYGT	5 cut(s)	185, 187, 355, 378, 546
AgeI	ACCGGT	1 cut(s)	501
AgsI	TTSAA	4 cut(s)	31, 558, 751, 1252
AjnI	CCWGG	2 cut(s)	740, 940
AjuI	GAANNNNNNNTTGG	4 cut(s)	11, 43, 435, 467
AluBI	AGCT	4 cut(s)	781, 923, 971, 1066
AluI	AGCT	4 cut(s)	781, 923, 971, 1066
Alw21I	GWGCWC	1 cut(s)	1068
Alw26I	GTCTC	6 cut(s)	176, 341, 692, 698, 1021, 1268
AlwI	GGATC	2 cut(s)	156, 433
Ama87I	CYCGRG	2 cut(s)	391, 1140
Aor51HI	AGCGCT	1 cut(s)	447
AoxI	GGCC	8 cut(s)	3, 388, 930, 943, 1143, 1206, 1236, 1284
ApeKI	GCWGC	2 cut(s)	968, 1043
ApoI	RAATTY	4 cut(s)	135, 601, 836, 1324
ArsI	GACNNNNNNTTYG	2 cut(s)	491, 523
AsiGI	ACCGGT	1 cut(s)	501
AspLEI	GCGC	4 cut(s)	126, 174, 448, 1043
AspS9I	GGNCC	5 cut(s)	52, 389, 1143, 1206, 1284
AsuC2I	CCSGG	7 cut(s)	155, 272, 392, 393, 483, 1141, 1142
AsuHPI	GGTGA	1 cut(s)	1373
AsuII	TTCGAA	1 cut(s)	1296
AvaI	CYCGRG	2 cut(s)	391, 1140
AvaII	GGWCC	1 cut(s)	52
AxyI	CCTNAGG	1 cut(s)	200
BanII	GRGCYC	1 cut(s)	1068
BbrPI	CACGTG	2 cut(s)	188, 381
BbsI	GAAGAC	2 cut(s)	708, 1097
Bbv12I	GWGCWC	1 cut(s)	1068
BbvI	GCAGC	2 cut(s)	980, 1030
BccI	CCATC	5 cut(s)	425, 868, 1154, 1233, 1313
BceAI	ACGGC	3 cut(s)	1248, 1351, 1366
BciT130I	CCWGG	2 cut(s)	742, 942
BclI	TGATCA	1 cut(s)	1126
BcnI	CCSGG	7 cut(s)	155, 272, 392, 393, 483, 1141, 1142
BcoDI	GTCTC	6 cut(s)	176, 341, 692, 698, 1021, 1268
BfoI	RGCGCY	2 cut(s)	449, 1044
BisI	GCNGC	8 cut(s)	326, 946, 969, 997, 1025, 1044, 1236, 1344
BlpI	GCTNAGC	1 cut(s)	924
BlsI	GCNGC	8 cut(s)	327, 947, 970, 998, 1026, 1045, 1237, 1345
Bme1390I	CCNGG	9 cut(s)	155, 272, 392, 393, 483, 742, 942, 1141, 1142
Bme18I	GGWCC	1 cut(s)	52
BmeT110I	CYCGRG	2 cut(s)	391, 1140
BmgT120I	GGNCC	5 cut(s)	52, 389, 1143, 1206, 1284
BmiI	GGNNCC	2 cut(s)	54, 1285
BmrFI	CCNGG	9 cut(s)	155, 272, 392, 393, 483, 742, 942, 1141, 1142
BmrI	ACTGGG	1 cut(s)	498
BmuI	ACTGGG	1 cut(s)	498
BoxI	GACNNNNGTC	1 cut(s)	188
BpiI	GAAGAC	2 cut(s)	708, 1097
Bpu1102I	GCTNAGC	1 cut(s)	924
Bpu14I	TTCGAA	1 cut(s)	1296
BpuEI	CTTGAG	1 cut(s)	385
BpuMI	CCSGG	7 cut(s)	155, 272, 392, 393, 483, 1141, 1142
BsaAI	YACGTR	4 cut(s)	169, 177, 188, 381
BsaBI	GATNNNNATC	1 cut(s)	279
BsaHI	GRCGYC	4 cut(s)	42, 1221, 1260, 1341
BsaI	GGTCTC	1 cut(s)	1268
BsaJI	CCNNGG	6 cut(s)	391, 392, 759, 1140, 1239, 1263
BsaWI	WCCGGW	2 cut(s)	501, 826
BsaXI	ACNNNNNCTCC	2 cut(s)	755, 785
Bse118I	RCCGGY	4 cut(s)	501, 928, 1037, 1286
Bse1I	ACTGG	3 cut(s)	355, 493, 860
Bse21I	CCTNAGG	1 cut(s)	200
Bse8I	GATNNNNATC	1 cut(s)	279
BseBI	CCWGG	2 cut(s)	742, 942
BseDI	CCNNGG	6 cut(s)	391, 392, 759, 1140, 1239, 1263
BseGI	GGATG	3 cut(s)	404, 417, 526
BseJI	GATNNNNATC	1 cut(s)	279
BseMII	CTCAG	4 cut(s)	72, 214, 644, 693
BseNI	ACTGG	3 cut(s)	355, 493, 860
BseRI	GAGGAG	2 cut(s)	188, 898
BseX3I	CGGCCG	1 cut(s)	1236
BseXI	GCAGC	2 cut(s)	980, 1030
Bsh1236I	CGCG	3 cut(s)	124, 126, 548
Bsh1285I	CGRYCG	2 cut(s)	502, 1239
BshFI	GGCC	8 cut(s)	5, 390, 932, 945, 1145, 1208, 1238, 1286
BshTI	ACCGGT	1 cut(s)	501
BsiEI	CGRYCG	2 cut(s)	502, 1239
BsiHKAI	GWGCWC	1 cut(s)	1068
BsiHKCI	CYCGRG	2 cut(s)	391, 1140
BsiWI	CGTACG	1 cut(s)	177
BslFI	GGGAC	4 cut(s)	413, 511, 557, 1138
BsmAI	GTCTC	6 cut(s)	176, 341, 692, 698, 1021, 1268
BsmBI	CGTCTC	1 cut(s)	1021
BsmFI	GGGAC	4 cut(s)	413, 511, 557, 1138
BsnI	GGCC	8 cut(s)	5, 390, 932, 945, 1145, 1208, 1238, 1286
Bso31I	GGTCTC	1 cut(s)	1268
BsoBI	CYCGRG	2 cut(s)	391, 1140
Bsp119I	TTCGAA	1 cut(s)	1296
Bsp1286I	GDGCHC	1 cut(s)	1068
Bsp143I	GATC	5 cut(s)	117, 148, 438, 904, 1126
Bsp1720I	GCTNAGC	1 cut(s)	924
Bsp19I	CCATGG	1 cut(s)	759
BspANI	GGCC	8 cut(s)	5, 390, 932, 945, 1145, 1208, 1238, 1286
BspCNI	CTCAG	4 cut(s)	71, 213, 645, 694
BspFNI	CGCG	3 cut(s)	124, 126, 548
BspLI	GGNNCC	2 cut(s)	54, 1285
BspPI	GGATC	2 cut(s)	156, 433
BspQI	GCTCTTC	1 cut(s)	631
BspT104I	TTCGAA	1 cut(s)	1296
BspTNI	GGTCTC	1 cut(s)	1268
BsrBI	CCGCTC	1 cut(s)	312
BsrFI	RCCGGY	4 cut(s)	501, 928, 1037, 1286
BsrI	ACTGG	3 cut(s)	355, 493, 860
BssAI	RCCGGY	4 cut(s)	501, 928, 1037, 1286
BssECI	CCNNGG	6 cut(s)	391, 392, 759, 1140, 1239, 1263
BssMI	GATC	5 cut(s)	117, 148, 438, 904, 1126
BssNI	GRCGYC	4 cut(s)	42, 1221, 1260, 1341
BssT1I	CCWWGG	2 cut(s)	759, 1263
Bst2UI	CCWGG	2 cut(s)	742, 942
Bst4CI	ACNGT	6 cut(s)	24, 80, 101, 106, 539, 1100
Bst6I	CTCTTC	2 cut(s)	254, 631
BstACI	GRCGYC	4 cut(s)	42, 1221, 1260, 1341
BstAPI	GCANNNNNTGC	1 cut(s)	322
BstBAI	YACGTR	4 cut(s)	169, 177, 188, 381
BstBI	TTCGAA	1 cut(s)	1296
BstC8I	GCNNGC	6 cut(s)	314, 661, 930, 1039, 1288, 1312
BstDEI	CTNAG	6 cut(s)	58, 200, 653, 702, 924, 1033
BstDSI	CCRYGG	1 cut(s)	759
BstF5I	GGATG	3 cut(s)	404, 417, 526
BstFNI	CGCG	3 cut(s)	124, 126, 548
BstH2I	RGCGCY	2 cut(s)	449, 1044
BstHHI	GCGC	4 cut(s)	126, 174, 448, 1043
BstKTI	GATC	5 cut(s)	120, 151, 441, 907, 1129
BstMAI	GTCTC	6 cut(s)	176, 341, 692, 698, 1021, 1268
BstMBI	GATC	5 cut(s)	117, 148, 438, 904, 1126
BstMCI	CGRYCG	2 cut(s)	502, 1239
BstMWI	GCNNNNNNNGC	7 cut(s)	322, 617, 665, 690, 929, 968, 1043
BstNI	CCWGG	2 cut(s)	742, 942
BstNSI	RCATGY	2 cut(s)	359, 564
BstPAI	GACNNNNGTC	1 cut(s)	188
BstSCI	CCNGG	9 cut(s)	153, 270, 390, 391, 481, 740, 940, 1139, 1140
BstUI	CGCG	3 cut(s)	124, 126, 548
BstV1I	GCAGC	2 cut(s)	980, 1030
BstV2I	GAAGAC	2 cut(s)	708, 1097
BstX2I	RGATCY	1 cut(s)	148
BstXI	CCANNNNNNTGG	1 cut(s)	632
BstYI	RGATCY	1 cut(s)	148
BstZI	CGGCCG	1 cut(s)	1236
Bsu36I	CCTNAGG	1 cut(s)	200
BsuRI	GGCC	8 cut(s)	5, 390, 932, 945, 1145, 1208, 1238, 1286
BtgI	CCRYGG	1 cut(s)	759
BtgZI	GCGATG	1 cut(s)	1291
BtsCI	GGATG	3 cut(s)	404, 417, 526
BtsI	GCAGTG	1 cut(s)	615
BtsIMutI	CAGTG	3 cut(s)	544, 615, 1096
Cac8I	GCNNGC	6 cut(s)	314, 661, 930, 1039, 1288, 1312
CfoI	GCGC	4 cut(s)	126, 174, 448, 1043
Cfr10I	RCCGGY	4 cut(s)	501, 928, 1037, 1286
Cfr13I	GGNCC	5 cut(s)	52, 389, 1143, 1206, 1284
Cfr9I	CCCGGG	2 cut(s)	391, 1140
CseI	GACGC	4 cut(s)	554, 1210, 1268, 1349
Csp6I	GTAC	6 cut(s)	102, 178, 343, 486, 772, 1197
CspAI	ACCGGT	1 cut(s)	501
CviAII	CATG	6 cut(s)	356, 514, 561, 760, 1130, 1385
CviQI	GTAC	6 cut(s)	102, 178, 343, 486, 772, 1197
DdeI	CTNAG	6 cut(s)	58, 200, 653, 702, 924, 1033
DpnI	GATC	5 cut(s)	119, 150, 440, 906, 1128
DpnII	GATC	5 cut(s)	117, 148, 438, 904, 1126
DraI	TTTAAA	1 cut(s)	796
DrdI	GACNNNNNNGTC	3 cut(s)	104, 712, 1172
DseDI	GACNNNNNNGTC	3 cut(s)	104, 712, 1172
EaeI	YGGCCR	2 cut(s)	943, 1236
EagI	CGGCCG	1 cut(s)	1236
Eam1104I	CTCTTC	2 cut(s)	254, 631
EarI	CTCTTC	2 cut(s)	254, 631
EciI	GGCGGA	3 cut(s)	258, 1305, 1368
Ecl136II	GAGCTC	1 cut(s)	1066
EclXI	CGGCCG	1 cut(s)	1236
Eco130I	CCWWGG	2 cut(s)	759, 1263
Eco24I	GRGCYC	1 cut(s)	1068
Eco31I	GGTCTC	1 cut(s)	1268
Eco47I	GGWCC	1 cut(s)	52
Eco47III	AGCGCT	1 cut(s)	447
Eco52I	CGGCCG	1 cut(s)	1236
Eco53kI	GAGCTC	1 cut(s)	1066
Eco72I	CACGTG	2 cut(s)	188, 381
Eco81I	CCTNAGG	1 cut(s)	200
Eco88I	CYCGRG	2 cut(s)	391, 1140
EcoICRI	GAGCTC	1 cut(s)	1066
EcoRII	CCWGG	2 cut(s)	740, 940
EcoT14I	CCWWGG	2 cut(s)	759, 1263
EcoT38I	GRGCYC	1 cut(s)	1068
ErhI	CCWWGG	2 cut(s)	759, 1263
Esp3I	CGTCTC	1 cut(s)	1021
FaeI	CATG	6 cut(s)	359, 517, 564, 763, 1133, 1388
FalI	AAGNNNNNCTT	6 cut(s)	455, 487, 700, 732, 917, 949
FaqI	GGGAC	4 cut(s)	413, 511, 557, 1138
FatI	CATG	6 cut(s)	355, 513, 560, 759, 1129, 1384
FbaI	TGATCA	1 cut(s)	1126
FblI	GTMKAC	1 cut(s)	192
Fnu4HI	GCNGC	8 cut(s)	326, 946, 969, 997, 1025, 1044, 1236, 1344
FokI	GGATG	3 cut(s)	391, 404, 533
FriOI	GRGCYC	1 cut(s)	1068
Fsp4HI	GCNGC	8 cut(s)	326, 946, 969, 997, 1025, 1044, 1236, 1344
FspAI	RTGCGCAY	1 cut(s)	173
FspI	TGCGCA	1 cut(s)	173
GlaI	GCGC	4 cut(s)	125, 173, 447, 1042
GluI	GCNGC	8 cut(s)	326, 946, 969, 997, 1025, 1044, 1236, 1344
HaeII	RGCGCY	2 cut(s)	449, 1044
HaeIII	GGCC	8 cut(s)	5, 390, 932, 945, 1145, 1208, 1238, 1286
HgaI	GACGC	4 cut(s)	554, 1210, 1268, 1349
HhaI	GCGC	4 cut(s)	126, 174, 448, 1043
Hin1I	GRCGYC	4 cut(s)	42, 1221, 1260, 1341
Hin1II	CATG	6 cut(s)	359, 517, 564, 763, 1133, 1388
Hin6I	GCGC	4 cut(s)	124, 172, 446, 1041
HinP1I	GCGC	4 cut(s)	124, 172, 446, 1041
HincII	GTYRAC	4 cut(s)	13, 193, 570, 1333
HindII	GTYRAC	4 cut(s)	13, 193, 570, 1333
HphI	GGTGA	1 cut(s)	1373
Hpy166II	GTNNAC	6 cut(s)	13, 193, 570, 724, 1333, 1381
Hpy188I	TCNGA	8 cut(s)	61, 76, 218, 285, 587, 654, 849, 1323
Hpy188III	TCNNGA	3 cut(s)	813, 1163, 1273
Hpy8I	GTNNAC	6 cut(s)	13, 193, 570, 724, 1333, 1381
Hpy99I	CGWCG	7 cut(s)	28, 47, 895, 1064, 1178, 1262, 1343
HpyAV	CCTTC	5 cut(s)	139, 218, 511, 992, 1219
HpyCH4III	ACNGT	6 cut(s)	24, 80, 101, 106, 539, 1100
HpyCH4IV	ACGT	7 cut(s)	42, 168, 176, 187, 380, 572, 1245
HpyCH4V	TGCA	3 cut(s)	564, 663, 902
HpyF10VI	GCNNNNNNNGC	7 cut(s)	322, 617, 665, 690, 929, 968, 1043
HpyF3I	CTNAG	6 cut(s)	58, 200, 653, 702, 924, 1033
HpySE526I	ACGT	7 cut(s)	42, 168, 176, 187, 380, 572, 1245
Hsp92I	GRCGYC	4 cut(s)	42, 1221, 1260, 1341
Hsp92II	CATG	6 cut(s)	359, 517, 564, 763, 1133, 1388
HspAI	GCGC	4 cut(s)	124, 172, 446, 1041
KroI	GCCGGC	3 cut(s)	928, 1037, 1286
KroNI	GCCGGC	3 cut(s)	930, 1039, 1288
Ksp22I	TGATCA	1 cut(s)	1126
Kzo9I	GATC	5 cut(s)	117, 148, 438, 904, 1126
LguI	GCTCTTC	1 cut(s)	631
LmnI	GCTCC	3 cut(s)	218, 763, 1220
Lsp1109I	GCAGC	2 cut(s)	980, 1030
MaeII	ACGT	7 cut(s)	42, 168, 176, 187, 380, 572, 1245
MalI	GATC	5 cut(s)	119, 150, 440, 906, 1128
MbiI	CCGCTC	1 cut(s)	312
MboI	GATC	5 cut(s)	117, 148, 438, 904, 1126
MboII	GAAGA	9 cut(s)	127, 241, 244, 247, 648, 708, 925, 928, 1097
MflI	RGATCY	1 cut(s)	148
MhlI	GDGCHC	1 cut(s)	1068
MluCI	AATT	5 cut(s)	135, 601, 836, 869, 1324
MluI	ACGCGT	1 cut(s)	546
MlyI	GAGTC	5 cut(s)	240, 395, 533, 764, 1128
MmeI	TCCRAC	1 cut(s)	196
MroNI	GCCGGC	3 cut(s)	928, 1037, 1286
MseI	TTAA	3 cut(s)	330, 474, 795
MslI	CAYNNNNRTG	2 cut(s)	167, 630
MspA1I	CMGCKG	1 cut(s)	781
MspR9I	CCNGG	9 cut(s)	155, 272, 392, 393, 483, 742, 942, 1141, 1142
MvaI	CCWGG	2 cut(s)	742, 942
MvnI	CGCG	3 cut(s)	124, 126, 548
MwoI	GCNNNNNNNGC	7 cut(s)	322, 617, 665, 690, 929, 968, 1043
NaeI	GCCGGC	3 cut(s)	930, 1039, 1288
NciI	CCSGG	7 cut(s)	155, 272, 392, 393, 483, 1141, 1142
NcoI	CCATGG	1 cut(s)	759
NdeII	GATC	5 cut(s)	117, 148, 438, 904, 1126
NgoMIV	GCCGGC	3 cut(s)	928, 1037, 1286
NlaIII	CATG	6 cut(s)	359, 517, 564, 763, 1133, 1388
NlaIV	GGNNCC	2 cut(s)	54, 1285
NmeAIII	GCCGAG	2 cut(s)	1047, 1264
NsbI	TGCGCA	1 cut(s)	173
NspI	RCATGY	2 cut(s)	359, 564
NspV	TTCGAA	1 cut(s)	1296
PciI	ACATGT	1 cut(s)	355
PciSI	GCTCTTC	1 cut(s)	631
PdiI	GCCGGC	3 cut(s)	930, 1039, 1288
PfeI	GAWTC	5 cut(s)	649, 1159, 1169, 1293, 1318
Pfl23II	CGTACG	1 cut(s)	177
PflMI	CCANNNNNTGG	2 cut(s)	430, 1390
PfoI	TCCNGGA	3 cut(s)	153, 270, 740
PinAI	ACCGGT	1 cut(s)	501
PkrI	GCNGC	8 cut(s)	327, 947, 970, 998, 1026, 1045, 1237, 1345
PleI	GAGTC	5 cut(s)	240, 395, 532, 763, 1128
PmaCI	CACGTG	2 cut(s)	188, 381
PmlI	CACGTG	2 cut(s)	188, 381
PpsI	GAGTC	5 cut(s)	240, 395, 532, 763, 1128
Ppu21I	YACGTR	4 cut(s)	169, 177, 188, 381
PscI	ACATGT	1 cut(s)	355
PshAI	GACNNNNGTC	1 cut(s)	188
Psp124BI	GAGCTC	1 cut(s)	1068
Psp1406I	AACGTT	1 cut(s)	572
Psp6I	CCWGG	2 cut(s)	740, 940
PspCI	CACGTG	2 cut(s)	188, 381
PspGI	CCWGG	2 cut(s)	740, 940
PspLI	CGTACG	1 cut(s)	177
PspN4I	GGNNCC	2 cut(s)	54, 1285
PspPI	GGNCC	5 cut(s)	52, 389, 1143, 1206, 1284
PsuI	RGATCY	1 cut(s)	148
PvuII	CAGCTG	1 cut(s)	781
RsaI	GTAC	6 cut(s)	103, 179, 344, 487, 773, 1198
RsaNI	GTAC	6 cut(s)	102, 178, 343, 486, 772, 1197
RseI	CAYNNNNRTG	2 cut(s)	167, 630
SacI	GAGCTC	1 cut(s)	1068
SalI	GTCGAC	1 cut(s)	191
SapI	GCTCTTC	1 cut(s)	631
SaqAI	TTAA	3 cut(s)	330, 474, 795
SatI	GCNGC	8 cut(s)	326, 946, 969, 997, 1025, 1044, 1236, 1344
Sau3AI	GATC	5 cut(s)	117, 148, 438, 904, 1126
Sau96I	GGNCC	5 cut(s)	52, 389, 1143, 1206, 1284
SchI	GAGTC	5 cut(s)	240, 395, 533, 764, 1128
ScrFI	CCNGG	9 cut(s)	155, 272, 392, 393, 483, 742, 942, 1141, 1142
SduI	GDGCHC	1 cut(s)	1068
SfuI	TTCGAA	1 cut(s)	1296
SinI	GGWCC	1 cut(s)	52
SmaI	CCCGGG	2 cut(s)	393, 1142
SmiMI	CAYNNNNRTG	2 cut(s)	167, 630
SmlI	CTYRAG	1 cut(s)	364
SmoI	CTYRAG	1 cut(s)	364
SrfI	GCCCGGGC	1 cut(s)	1142
Sse9I	AATT	5 cut(s)	135, 601, 836, 869, 1324
SstI	GAGCTC	1 cut(s)	1068
StyD4I	CCNGG	9 cut(s)	153, 270, 390, 391, 481, 740, 940, 1139, 1140
StyI	CCWWGG	2 cut(s)	759, 1263
TaaI	ACNGT	6 cut(s)	24, 80, 101, 106, 539, 1100
TaiI	ACGT	7 cut(s)	45, 171, 179, 190, 383, 575, 1248
TasI	AATT	5 cut(s)	135, 601, 836, 869, 1324
TauI	GCSGC	6 cut(s)	328, 948, 999, 1027, 1238, 1346
TfiI	GAWTC	5 cut(s)	649, 1159, 1169, 1293, 1318
Tru1I	TTAA	3 cut(s)	330, 474, 795
Tru9I	TTAA	3 cut(s)	330, 474, 795
TscAI	CASTG	3 cut(s)	544, 622, 1103
TseI	GCWGC	2 cut(s)	968, 1043
TspDTI	ATGAA	4 cut(s)	82, 293, 492, 530
TspGWI	ACGGA	2 cut(s)	333, 1162
TspMI	CCCGGG	2 cut(s)	391, 1140
TspRI	CASTG	3 cut(s)	544, 622, 1103
Van91I	CCANNNNNTGG	2 cut(s)	430, 1390
VpaK11BI	GGWCC	1 cut(s)	52
XapI	RAATTY	4 cut(s)	135, 601, 836, 1324
XceI	RCATGY	2 cut(s)	359, 564
XcmI	CCANNNNNNNNNTGG	1 cut(s)	536
XmaI	CCCGGG	2 cut(s)	391, 1140
XmiI	GTMKAC	1 cut(s)	192
ZraI	GACGTC	1 cut(s)	43

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.