Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0000808

Physical Location & Seq

Genomic Coordinates Forward (+)

48047104 .. 48048497

Gene Structure 1394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G022590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGTTGAGTCACCAAAGGAGCTCTAAACCCGAGGCCCCCCTTCTGCATCAAAAGGACCAAAAACATTCCCATATCCTCCTAATTCCCAAGTGGCACCCCAAATCCAATTTGTCTCCTTCCGCCGCCAGTCCAATCACCATGACCCAAAACTCCGACGCCACTCCCTTCACTCGATTCGACGTCGTTTCGGACCACTCAGACCACTACTACAGTGCCTCCGGCGAGAAGCAAAAGTACGGCGGATCCGTCCACAAGTTGATCATGAAGGAGTGGCGGATTCTGGAGAACAATCTCCCCGACTCTATCTACGTGCGCGTGTACGAGACGCGCATTGATCTTCTCAGAGCCGTCATCGTCGGCGCCGCCGGGACTCCCTACCACGACGCGCTCTTCTTCTTCGATATCAACTTCCCGTCGGACTACCCGACCCGGCCGCCCAATGTGCATTACCGCTCATACGGGTTGCGGGTCAACCCGAATCTTTACGCGAGCGGGTTCGTCTGCCTGAGCCTGCTGAACACCTGGACCGGAAAGAAGAGGGAGAAGTGGGACCCGGCCCAGTCCACGGTCCTCCAGGTTCTGGTCTCGATCCAGGCGCTCGTTTTGAACGAGAAGCCGTATTTCAACGAACCGGGTACCGGGTCGCCGGGCGGGTCGGCCGGGGAGAAGAGGTCGCGGGCGTACAATGAGGACGCGTTTGTCTTGACGTGCAAAACGACGCTGTTTTCGCTCCGGAACCCGCCCAAGAATTTCGAGGCGTTCACGGCCGAGCATTATCGCGAGAGGGGGAGTCGAATTGCAAGAGCGTGCGGCGCGTACGTGAGCGGGCGCGTGGGAGTTGGGTACTACAGAGATGGGGTGGAGTTTGAGCCGTGCTCGTCTTCTAAGTCTAAAGTAGTTTCGAAAAAATTTGTAGGGTTAATGCAGAAGTTGTACCCGCAACTGGTCCAGGCTTTCAAGAAGAATGGGACTCTTTTGGGGGATTTAGTGGAGCAGTTGGAGGTGAAGGAGAAAACGACGCCGGTTAAGGTTCGAGTTGACAAGAAAGCTAAGGTTGGTATTGCTAACAAGGTTATTGGGAAATTGCGCAAGTTATTTTGTTCCAACAACAAGAAGAAGAAGAGTCAGAAGATGGAGGAGAGTGATAAGAAGGATGTCAATGCTGGAGTGGCTGTGGGATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

UQ_con

Protein Analysis

394

Amino Acids

44.16

Weight (kDa)

9.64

Isoelectric Point (pI)

35.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	87 - 207	1.3e-22	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000808)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g01260 FvH4_4g19890 FvH4_4g19900 FvH4_4g19910 FvH4_4g23111
malus_domestica	MD16G1152700.v1.1
prunus_persica	Prupe.1G115900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0415111 RchiOBHm_Chr4g0421801 RchiOBHm_Chr4g0425521 RchiOBHm_Chr4g0425551
rosa_laevigata	RLG00000007355 RLG00000007357 RLG00000007358 RLG00000007360 RLG00000007361 RLG00000007364 RLG00000007366 RLG00000007640 RLG00000008097 RLG00000022500
rosa_multiflora	Rmu_co8278857.1_g000001 Rmu_sc0000635.1_g000001 Rmu_sc0000709.1_g000009 Rmu_sc0001900.1_g000008 Rmu_sc0001900.1_g000009 Rmu_sc0003748.1_g000014 Rmu_sc0008440.1_g000003 Rmu_sc0010306.1_g000005 Rmu_sc0012856.1_g000010 Rmu_sc0032188.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364100 Rroxscaffold_5G00367460 Rroxscaffold_5G00367480 Rroxscaffold_5G00367490 Rroxscaffold_5G00367510 Rroxscaffold_5G00371110
rosa_rugosa	Rorug04G0176300 Rorug04G0203700 Rorug04G0203800 Rorug04G0203800 Rorug04G0203900 Rorug06G0289400
rosa_samantha	Rh4AG192100 Rh4AG235200 Rh4AG236000 Rh4AG260700 Rh4AG260900 Rh4BG190000 Rh4BG238700 Rh4BG266400 Rh4BG266600 Rh4BG266700 Rh4CG202900 Rh4CG250700 Rh4CG277700 Rh4CG277900 Rh4CG278000 Rh4DG235300 Rh4DG262700 Rh4DG262900 Rh4DG263100 Rh6BG409300 Rh6DG401700
rosa_wichuraiana	Rw4G016340 Rw4G019840 Rw4G022570 Rw4G022580 Rw4G022590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	698
AatII	GACGTC	1 cut(s)	183
Acc16I	TGCGCA	1 cut(s)	1088
Acc65I	GGTACC	1 cut(s)	635
AccB1I	GGYRCC	3 cut(s)	93, 359, 635
AccB7I	CCANNNNNTGG	1 cut(s)	580
AccBSI	CCGCTC	3 cut(s)	453, 492, 825
AccII	CGCG	9 cut(s)	315, 328, 386, 488, 676, 695, 780, 815, 831
AccIII	TCCGGA	1 cut(s)	732
AclWI	GGATC	3 cut(s)	237, 250, 583
AcoI	YGGCCR	3 cut(s)	431, 657, 765
AcsI	RAATTY	2 cut(s)	748, 908
AcyI	GRCGYC	4 cut(s)	156, 180, 360, 1019
AfaI	GTAC	7 cut(s)	236, 320, 637, 683, 818, 845, 935
AfiI	CCNNNNNNNGG	4 cut(s)	565, 580, 638, 943
AflIII	ACRYGT	1 cut(s)	693
AgsI	TTSAA	3 cut(s)	607, 625, 958
AjiI	CACGTC	1 cut(s)	708
AjnI	CCWGG	4 cut(s)	521, 573, 591, 948
AluBI	AGCT	2 cut(s)	21, 1049
AluI	AGCT	2 cut(s)	21, 1049
Alw21I	GWGCWC	2 cut(s)	23, 878
Alw26I	GTCTC	3 cut(s)	117, 317, 589
AlwI	GGATC	3 cut(s)	237, 250, 583
AlwNI	CAGNNNCTG	1 cut(s)	580
Ama87I	CYCGRG	1 cut(s)	29
Aor13HI	TCCGGA	1 cut(s)	732
AoxI	GGCC	5 cut(s)	33, 431, 555, 657, 765
ApoI	RAATTY	2 cut(s)	748, 908
ArsI	GACNNNNNNTTYG	2 cut(s)	709, 741
Asp718I	GGTACC	1 cut(s)	635
AspLEI	GCGC	8 cut(s)	315, 330, 362, 388, 598, 815, 831, 1089
AspS9I	GGNCC	8 cut(s)	34, 55, 190, 525, 550, 556, 568, 946
AsuC2I	CCSGG	7 cut(s)	367, 430, 554, 633, 640, 648, 661
AsuHPI	GGTGA	2 cut(s)	127, 1015
AsuII	TTCGAA	1 cut(s)	902
AvaI	CYCGRG	1 cut(s)	29
AvaII	GGWCC	6 cut(s)	55, 190, 525, 550, 568, 946
BamHI	GGATCC	1 cut(s)	242
BanI	GGYRCC	3 cut(s)	93, 359, 635
BanII	GRGCYC	1 cut(s)	23
BarI	GAAGNNNNNNTAC	2 cut(s)	218, 250
BbsI	GAAGAC	1 cut(s)	873
Bbv12I	GWGCWC	2 cut(s)	23, 878
BccI	CCATC	2 cut(s)	848, 1126
BceAI	ACGGC	5 cut(s)	253, 332, 601, 780, 856
BciT130I	CCWGG	4 cut(s)	523, 575, 593, 950
BclI	TGATCA	1 cut(s)	258
BcnI	CCSGG	7 cut(s)	367, 430, 554, 633, 640, 648, 661
BcoDI	GTCTC	3 cut(s)	117, 317, 589
BfmI	CTRYAG	2 cut(s)	208, 847
BfoI	RGCGCY	2 cut(s)	363, 599
BisI	GCNGC	4 cut(s)	123, 363, 434, 811
BlsI	GCNGC	4 cut(s)	124, 364, 435, 812
Bme18I	GGWCC	6 cut(s)	55, 190, 525, 550, 568, 946
BmeT110I	CYCGRG	1 cut(s)	29
BmgBI	CACGTC	1 cut(s)	708
BmgT120I	GGNCC	8 cut(s)	34, 55, 190, 525, 550, 556, 568, 946
BmiI	GGNNCC	8 cut(s)	36, 95, 244, 361, 551, 552, 637, 737
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	1 cut(s)	55
BmuI	ACTGGG	1 cut(s)	553
BpiI	GAAGAC	1 cut(s)	873
BplI	GAGNNNNNCTC	2 cut(s)	860, 892
BpmI	CTGGAG	3 cut(s)	302, 557, 1185
Bpu10I	CCTNAGC	2 cut(s)	506, 1050
Bpu14I	TTCGAA	1 cut(s)	902
BpuMI	CCSGG	7 cut(s)	367, 430, 554, 633, 640, 648, 661
BsaAI	YACGTR	2 cut(s)	310, 820
BsaHI	GRCGYC	4 cut(s)	156, 180, 360, 1019
BsaI	GGTCTC	1 cut(s)	589
BsaJI	CCNNGG	3 cut(s)	30, 564, 660
BsaWI	WCCGGW	2 cut(s)	527, 732
BsaXI	ACNNNNNCTCC	5 cut(s)	200, 230, 656, 686, 1158
Bsc4I	CCNNNNNNNGG	4 cut(s)	565, 580, 638, 943
Bse118I	RCCGGY	1 cut(s)	1021
Bse1I	ACTGG	3 cut(s)	126, 559, 948
BseAI	TCCGGA	1 cut(s)	732
BseBI	CCWGG	4 cut(s)	523, 575, 593, 950
BseDI	CCNNGG	3 cut(s)	30, 564, 660
BseGI	GGATG	2 cut(s)	1159, 1184
BseLI	CCNNNNNNNGG	4 cut(s)	565, 580, 638, 943
BseMII	CTCAG	3 cut(s)	210, 355, 497
BseNI	ACTGG	3 cut(s)	126, 559, 948
BseRI	GAGGAG	1 cut(s)	1151
BseX3I	CGGCCG	3 cut(s)	431, 657, 765
Bsh1236I	CGCG	9 cut(s)	315, 328, 386, 488, 676, 695, 780, 815, 831
Bsh1285I	CGRYCG	3 cut(s)	434, 660, 768
BshFI	GGCC	5 cut(s)	35, 433, 557, 659, 767
BshNI	GGYRCC	3 cut(s)	93, 359, 635
BsiEI	CGRYCG	3 cut(s)	434, 660, 768
BsiHKAI	GWGCWC	2 cut(s)	23, 878
BsiHKCI	CYCGRG	1 cut(s)	29
BsiWI	CGTACG	1 cut(s)	816
BslFI	GGGAC	3 cut(s)	382, 563, 982
BslI	CCNNNNNNNGG	4 cut(s)	565, 580, 638, 943
BsmAI	GTCTC	3 cut(s)	117, 317, 589
BsmBI	CGTCTC	1 cut(s)	317
BsmFI	GGGAC	3 cut(s)	382, 563, 982
BsnI	GGCC	5 cut(s)	35, 433, 557, 659, 767
Bso31I	GGTCTC	1 cut(s)	589
BsoBI	CYCGRG	1 cut(s)	29
Bsp119I	TTCGAA	1 cut(s)	902
Bsp1286I	GDGCHC	2 cut(s)	23, 878
Bsp13I	TCCGGA	1 cut(s)	732
Bsp143I	GATC	4 cut(s)	242, 258, 334, 588
Bsp68I	TCGCGA	1 cut(s)	780
BspANI	GGCC	5 cut(s)	35, 433, 557, 659, 767
BspCNI	CTCAG	3 cut(s)	209, 354, 498
BspEI	TCCGGA	1 cut(s)	732
BspFNI	CGCG	9 cut(s)	315, 328, 386, 488, 676, 695, 780, 815, 831
BspHI	TCATGA	1 cut(s)	261
BspLI	GGNNCC	8 cut(s)	36, 95, 244, 361, 551, 552, 637, 737
BspPI	GGATC	3 cut(s)	237, 250, 583
BspQI	GCTCTTC	1 cut(s)	395
BspT104I	TTCGAA	1 cut(s)	902
BspT107I	GGYRCC	3 cut(s)	93, 359, 635
BspTNI	GGTCTC	1 cut(s)	589
BsrBI	CCGCTC	3 cut(s)	453, 492, 825
BsrFI	RCCGGY	1 cut(s)	1021
BsrI	ACTGG	3 cut(s)	126, 559, 948
BssAI	RCCGGY	1 cut(s)	1021
BssECI	CCNNGG	3 cut(s)	30, 564, 660
BssMI	GATC	4 cut(s)	242, 258, 334, 588
BssNI	GRCGYC	4 cut(s)	156, 180, 360, 1019
Bst2UI	CCWGG	4 cut(s)	523, 575, 593, 950
Bst4CI	ACNGT	2 cut(s)	212, 568
Bst6I	CTCTTC	4 cut(s)	395, 530, 662, 1115
BstACI	GRCGYC	4 cut(s)	156, 180, 360, 1019
BstBAI	YACGTR	2 cut(s)	310, 820
BstBI	TTCGAA	1 cut(s)	902
BstC8I	GCNNGC	5 cut(s)	490, 512, 678, 808, 827
BstDEI	CTNAG	5 cut(s)	196, 341, 506, 885, 1050
BstDSI	CCRYGG	1 cut(s)	564
BstF5I	GGATG	2 cut(s)	1159, 1184
BstFNI	CGCG	9 cut(s)	315, 328, 386, 488, 676, 695, 780, 815, 831
BstH2I	RGCGCY	2 cut(s)	363, 599
BstHHI	GCGC	8 cut(s)	315, 330, 362, 388, 598, 815, 831, 1089
BstKTI	GATC	4 cut(s)	245, 261, 337, 591
BstMAI	GTCTC	3 cut(s)	117, 317, 589
BstMBI	GATC	4 cut(s)	242, 258, 334, 588
BstMCI	CGRYCG	3 cut(s)	434, 660, 768
BstMWI	GCNNNNNNNGC	5 cut(s)	442, 727, 764, 812, 1169
BstNI	CCWGG	4 cut(s)	523, 575, 593, 950
BstSFI	CTRYAG	2 cut(s)	208, 847
BstUI	CGCG	9 cut(s)	315, 328, 386, 488, 676, 695, 780, 815, 831
BstV2I	GAAGAC	1 cut(s)	873
BstX2I	RGATCY	1 cut(s)	242
BstYI	RGATCY	1 cut(s)	242
BstZI	CGGCCG	3 cut(s)	431, 657, 765
BsuRI	GGCC	5 cut(s)	35, 433, 557, 659, 767
BtgI	CCRYGG	1 cut(s)	564
BtrI	CACGTC	1 cut(s)	708
BtsCI	GGATG	2 cut(s)	1159, 1184
BtsIMutI	CAGTG	1 cut(s)	217
BtuMI	TCGCGA	1 cut(s)	780
Cac8I	GCNNGC	5 cut(s)	490, 512, 678, 808, 827
CaiI	CAGNNNCTG	1 cut(s)	580
CciI	TCATGA	1 cut(s)	261
CfoI	GCGC	8 cut(s)	315, 330, 362, 388, 598, 815, 831, 1089
Cfr10I	RCCGGY	1 cut(s)	1021
Cfr13I	GGNCC	8 cut(s)	34, 55, 190, 525, 550, 556, 568, 946
CseI	GACGC	6 cut(s)	164, 334, 392, 701, 727, 1027
Csp6I	GTAC	7 cut(s)	235, 319, 636, 682, 817, 844, 934
CviAII	CATG	2 cut(s)	139, 262
CviQI	GTAC	7 cut(s)	235, 319, 636, 682, 817, 844, 934
DdeI	CTNAG	5 cut(s)	196, 341, 506, 885, 1050
DinI	GGCGCC	1 cut(s)	361
DpnI	GATC	4 cut(s)	244, 260, 336, 590
DpnII	GATC	4 cut(s)	242, 258, 334, 588
DrdI	GACNNNNNNGTC	1 cut(s)	698
DseDI	GACNNNNNNGTC	1 cut(s)	698
EaeI	YGGCCR	3 cut(s)	431, 657, 765
EagI	CGGCCG	3 cut(s)	431, 657, 765
Eam1104I	CTCTTC	4 cut(s)	395, 530, 662, 1115
EarI	CTCTTC	4 cut(s)	395, 530, 662, 1115
EciI	GGCGGA	3 cut(s)	109, 255, 289
Ecl136II	GAGCTC	1 cut(s)	21
EclXI	CGGCCG	3 cut(s)	431, 657, 765
Eco24I	GRGCYC	1 cut(s)	23
Eco31I	GGTCTC	1 cut(s)	589
Eco32I	GATATC	1 cut(s)	403
Eco47I	GGWCC	6 cut(s)	55, 190, 525, 550, 568, 946
Eco52I	CGGCCG	3 cut(s)	431, 657, 765
Eco53kI	GAGCTC	1 cut(s)	21
Eco88I	CYCGRG	1 cut(s)	29
EcoICRI	GAGCTC	1 cut(s)	21
EcoO109I	RGGNCCY	2 cut(s)	34, 550
EcoRII	CCWGG	4 cut(s)	521, 573, 591, 948
EcoRV	GATATC	1 cut(s)	403
EcoT38I	GRGCYC	1 cut(s)	23
EgeI	GGCGCC	1 cut(s)	361
EheI	GGCGCC	1 cut(s)	361
Esp3I	CGTCTC	1 cut(s)	317
FaeI	CATG	2 cut(s)	142, 265
FaiI	YATR	4 cut(s)	72, 140, 263, 457
FaqI	GGGAC	3 cut(s)	382, 563, 982
FatI	CATG	2 cut(s)	138, 261
FauI	CCCGC	7 cut(s)	459, 485, 644, 669, 747, 818, 945
FbaI	TGATCA	1 cut(s)	258
Fnu4HI	GCNGC	4 cut(s)	123, 363, 434, 811
FokI	GGATG	1 cut(s)	1166
FriOI	GRGCYC	1 cut(s)	23
Fsp4HI	GCNGC	4 cut(s)	123, 363, 434, 811
FspI	TGCGCA	1 cut(s)	1088
GlaI	GCGC	8 cut(s)	314, 329, 361, 387, 597, 814, 830, 1088
GluI	GCNGC	4 cut(s)	123, 363, 434, 811
GsuI	CTGGAG	3 cut(s)	302, 557, 1185
HaeII	RGCGCY	2 cut(s)	363, 599
HaeIII	GGCC	5 cut(s)	35, 433, 557, 659, 767
HgaI	GACGC	6 cut(s)	164, 334, 392, 701, 727, 1027
HhaI	GCGC	8 cut(s)	315, 330, 362, 388, 598, 815, 831, 1089
Hin1I	GRCGYC	4 cut(s)	156, 180, 360, 1019
Hin1II	CATG	2 cut(s)	142, 265
Hin6I	GCGC	8 cut(s)	313, 328, 360, 386, 596, 813, 829, 1087
HinP1I	GCGC	8 cut(s)	313, 328, 360, 386, 596, 813, 829, 1087
HincII	GTYRAC	2 cut(s)	472, 1039
HindII	GTYRAC	2 cut(s)	472, 1039
HinfI	GANTC	9 cut(s)	7, 174, 277, 299, 370, 478, 790, 970, 1123
HphI	GGTGA	2 cut(s)	127, 1015
Hpy166II	GTNNAC	6 cut(s)	250, 319, 472, 564, 762, 1039
Hpy188I	TCNGA	6 cut(s)	154, 190, 199, 344, 418, 1128
Hpy188III	TCNNGA	7 cut(s)	262, 281, 586, 703, 733, 779, 958
Hpy8I	GTNNAC	6 cut(s)	250, 319, 472, 564, 762, 1039
Hpy99I	CGWCG	8 cut(s)	158, 182, 185, 359, 386, 418, 721, 1021
HpyAV	CCTTC	6 cut(s)	50, 126, 175, 259, 1000, 1144
HpyCH4III	ACNGT	2 cut(s)	212, 568
HpyCH4IV	ACGT	4 cut(s)	180, 309, 707, 819
HpyCH4V	TGCA	5 cut(s)	46, 445, 711, 800, 925
HpyF10VI	GCNNNNNNNGC	5 cut(s)	442, 727, 764, 812, 1169
HpyF3I	CTNAG	5 cut(s)	196, 341, 506, 885, 1050
HpySE526I	ACGT	4 cut(s)	180, 309, 707, 819
Hsp92I	GRCGYC	4 cut(s)	156, 180, 360, 1019
Hsp92II	CATG	2 cut(s)	142, 265
HspAI	GCGC	8 cut(s)	313, 328, 360, 386, 596, 813, 829, 1087
KasI	GGCGCC	1 cut(s)	359
KflI	GGGWCCC	1 cut(s)	550
Kpn2I	TCCGGA	1 cut(s)	732
KpnI	GGTACC	1 cut(s)	639
Ksp22I	TGATCA	1 cut(s)	258
Kzo9I	GATC	4 cut(s)	242, 258, 334, 588
LguI	GCTCTTC	1 cut(s)	395
LmnI	GCTCC	3 cut(s)	18, 735, 991
LweI	GCATC	1 cut(s)	55
MaeII	ACGT	4 cut(s)	180, 309, 707, 819
MaeIII	GTNAC	1 cut(s)	8
MalI	GATC	4 cut(s)	244, 260, 336, 590
MbiI	CCGCTC	3 cut(s)	453, 492, 825
MboI	GATC	4 cut(s)	242, 258, 334, 588
MflI	RGATCY	1 cut(s)	242
MhlI	GDGCHC	2 cut(s)	23, 878
MluCI	AATT	6 cut(s)	81, 106, 748, 795, 908, 1082
MluI	ACGCGT	1 cut(s)	693
Mly113I	GGCGCC	1 cut(s)	360
MlyI	GAGTC	6 cut(s)	16, 293, 364, 799, 964, 1132
MmeI	TCCRAC	4 cut(s)	177, 396, 978, 1128
MroI	TCCGGA	1 cut(s)	732
MseI	TTAA	2 cut(s)	920, 1026
MvaI	CCWGG	4 cut(s)	523, 575, 593, 950
MvnI	CGCG	9 cut(s)	315, 328, 386, 488, 676, 695, 780, 815, 831
MwoI	GCNNNNNNNGC	5 cut(s)	442, 727, 764, 812, 1169
NarI	GGCGCC	1 cut(s)	360
NciI	CCSGG	7 cut(s)	367, 430, 554, 633, 640, 648, 661
NdeII	GATC	4 cut(s)	242, 258, 334, 588
NlaIII	CATG	2 cut(s)	142, 265
NlaIV	GGNNCC	8 cut(s)	36, 95, 244, 361, 551, 552, 637, 737
NmeAIII	GCCGAG	1 cut(s)	793
NmuCI	GTSAC	1 cut(s)	8
NruI	TCGCGA	1 cut(s)	780
NsbI	TGCGCA	1 cut(s)	1088
NspV	TTCGAA	1 cut(s)	902
PagI	TCATGA	1 cut(s)	261
PciSI	GCTCTTC	1 cut(s)	395
PcsI	WCGNNNNNNNCGW	4 cut(s)	243, 422, 606, 713
PfeI	GAWTC	3 cut(s)	174, 277, 478
Pfl23II	CGTACG	1 cut(s)	816
PflMI	CCANNNNNTGG	1 cut(s)	580
PkrI	GCNGC	4 cut(s)	124, 364, 435, 812
PleI	GAGTC	6 cut(s)	15, 293, 364, 798, 964, 1131
PluTI	GGCGCC	1 cut(s)	363
PpsI	GAGTC	6 cut(s)	15, 293, 364, 798, 964, 1131
Ppu21I	YACGTR	2 cut(s)	310, 820
PpuMI	RGGWCCY	1 cut(s)	550
Psp124BI	GAGCTC	1 cut(s)	23
Psp5II	RGGWCCY	1 cut(s)	550
Psp6I	CCWGG	4 cut(s)	521, 573, 591, 948
PspGI	CCWGG	4 cut(s)	521, 573, 591, 948
PspLI	CGTACG	1 cut(s)	816
PspN4I	GGNNCC	8 cut(s)	36, 95, 244, 361, 551, 552, 637, 737
PspPI	GGNCC	8 cut(s)	34, 55, 190, 525, 550, 556, 568, 946
PspPPI	RGGWCCY	1 cut(s)	550
PstNI	CAGNNNCTG	1 cut(s)	580
PsuI	RGATCY	1 cut(s)	242
RruI	TCGCGA	1 cut(s)	780
RsaI	GTAC	7 cut(s)	236, 320, 637, 683, 818, 845, 935
RsaNI	GTAC	7 cut(s)	235, 319, 636, 682, 817, 844, 934
SacI	GAGCTC	1 cut(s)	23
SapI	GCTCTTC	1 cut(s)	395
SaqAI	TTAA	2 cut(s)	920, 1026
SatI	GCNGC	4 cut(s)	123, 363, 434, 811
Sau3AI	GATC	4 cut(s)	242, 258, 334, 588
Sau96I	GGNCC	8 cut(s)	34, 55, 190, 525, 550, 556, 568, 946
SchI	GAGTC	6 cut(s)	16, 293, 364, 799, 964, 1132
SduI	GDGCHC	2 cut(s)	23, 878
SfaNI	GCATC	1 cut(s)	55
SfcI	CTRYAG	2 cut(s)	208, 847
SfoI	GGCGCC	1 cut(s)	361
SfuI	TTCGAA	1 cut(s)	902
SinI	GGWCC	6 cut(s)	55, 190, 525, 550, 568, 946
Sse9I	AATT	6 cut(s)	81, 106, 748, 795, 908, 1082
SspDI	GGCGCC	1 cut(s)	359
SstI	GAGCTC	1 cut(s)	23
TaaI	ACNGT	2 cut(s)	212, 568
TaiI	ACGT	4 cut(s)	183, 312, 710, 822
TaqI	TCGA	8 cut(s)	172, 177, 399, 587, 753, 793, 902, 1033
TasI	AATT	6 cut(s)	81, 106, 748, 795, 908, 1082
TauI	GCSGC	4 cut(s)	125, 365, 436, 813
TfiI	GAWTC	3 cut(s)	174, 277, 478
Tru1I	TTAA	2 cut(s)	920, 1026
Tru9I	TTAA	2 cut(s)	920, 1026
TscAI	CASTG	1 cut(s)	217
TseFI	GTSAC	1 cut(s)	8
Tsp45I	GTSAC	1 cut(s)	8
TspDTI	ATGAA	1 cut(s)	278
TspGWI	ACGGA	1 cut(s)	235
TspRI	CASTG	1 cut(s)	217
Van91I	CCANNNNNTGG	1 cut(s)	580
VpaK11BI	GGWCC	6 cut(s)	55, 190, 525, 550, 568, 946
XapI	RAATTY	2 cut(s)	748, 908
ZraI	GACGTC	1 cut(s)	181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.