Belongs to the ubiquitin-conjugating enzyme family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| UQ_con | PF00179 | 41 - 154 | 2.5e-24 | Ubiquitin-conjugating enzyme |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 107 |
| AatII | GACGTC | 1 cut(s) | 48 |
| Acc16I | TGCGCA | 1 cut(s) | 176 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 433 |
| AccBSI | CCGCTC | 1 cut(s) | 315 |
| AccI | GTMKAC | 2 cut(s) | 99, 195 |
| AccII | CGCG | 3 cut(s) | 127, 129, 551 |
| AciI | CCGC | 5 cut(s) | 107, 313, 328, 906, 978 |
| AclI | AACGTT | 1 cut(s) | 575 |
| AclWI | GGATC | 2 cut(s) | 159, 436 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 3 cut(s) | 138, 604, 842 |
| AcvI | CACGTG | 2 cut(s) | 191, 384 |
| AcyI | GRCGYC | 2 cut(s) | 45, 761 |
| AfaI | GTAC | 5 cut(s) | 182, 347, 490, 779, 1020 |
| AfeI | AGCGCT | 1 cut(s) | 450 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 205, 242, 400, 433, 491, 724, 787 |
| AflIII | ACRYGT | 4 cut(s) | 188, 190, 381, 549 |
| AgeI | ACCGGT | 1 cut(s) | 504 |
| AgsI | TTSAA | 4 cut(s) | 34, 561, 757, 794 |
| AjnI | CCWGG | 1 cut(s) | 746 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 14, 46, 438, 470 |
| AluBI | AGCT | 5 cut(s) | 797, 929, 944, 949, 1001 |
| AluI | AGCT | 5 cut(s) | 797, 929, 944, 949, 1001 |
| Alw26I | GTCTC | 5 cut(s) | 13, 179, 344, 698, 997 |
| AlwI | GGATC | 2 cut(s) | 159, 436 |
| Ama87I | CYCGRG | 1 cut(s) | 394 |
| Aor51HI | AGCGCT | 1 cut(s) | 450 |
| AoxI | GGCC | 4 cut(s) | 3, 391, 951, 964 |
| ApeKI | GCWGC | 1 cut(s) | 980 |
| ApoI | RAATTY | 3 cut(s) | 138, 604, 842 |
| AsiGI | ACCGGT | 1 cut(s) | 504 |
| AspLEI | GCGC | 3 cut(s) | 129, 177, 451 |
| AspS9I | GGNCC | 3 cut(s) | 55, 392, 964 |
| AsuC2I | CCSGG | 6 cut(s) | 158, 275, 395, 396, 486, 963 |
| AvaI | CYCGRG | 1 cut(s) | 394 |
| AvaII | GGWCC | 1 cut(s) | 55 |
| BbrPI | CACGTG | 2 cut(s) | 191, 384 |
| BbsI | GAAGAC | 1 cut(s) | 714 |
| BbvI | GCAGC | 1 cut(s) | 967 |
| BccI | CCATC | 3 cut(s) | 428, 760, 874 |
| BciT130I | CCWGG | 1 cut(s) | 748 |
| BcnI | CCSGG | 6 cut(s) | 158, 275, 395, 396, 486, 963 |
| BcoDI | GTCTC | 5 cut(s) | 13, 179, 344, 698, 997 |
| BfmI | CTRYAG | 1 cut(s) | 996 |
| BfoI | RGCGCY | 1 cut(s) | 452 |
| BisI | GCNGC | 2 cut(s) | 329, 981 |
| BlpI | GCTNAGC | 1 cut(s) | 945 |
| BlsI | GCNGC | 2 cut(s) | 330, 982 |
| Bme1390I | CCNGG | 7 cut(s) | 158, 275, 395, 396, 486, 748, 963 |
| Bme18I | GGWCC | 1 cut(s) | 55 |
| BmeT110I | CYCGRG | 1 cut(s) | 394 |
| BmgT120I | GGNCC | 3 cut(s) | 55, 392, 964 |
| BmrFI | CCNGG | 7 cut(s) | 158, 275, 395, 396, 486, 748, 963 |
| BmrI | ACTGGG | 1 cut(s) | 501 |
| BmuI | ACTGGG | 1 cut(s) | 501 |
| BoxI | GACNNNNGTC | 1 cut(s) | 191 |
| BpiI | GAAGAC | 1 cut(s) | 714 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 945 |
| BpuEI | CTTGAG | 1 cut(s) | 388 |
| BpuMI | CCSGG | 6 cut(s) | 158, 275, 395, 396, 486, 963 |
| BsaAI | YACGTR | 4 cut(s) | 172, 191, 384, 1022 |
| BsaBI | GATNNNNATC | 1 cut(s) | 282 |
| BsaHI | GRCGYC | 2 cut(s) | 45, 761 |
| BsaI | GGTCTC | 1 cut(s) | 997 |
| BsaJI | CCNNGG | 2 cut(s) | 394, 395 |
| BsaWI | WCCGGW | 1 cut(s) | 504 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 59, 89, 761, 791 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 205, 242, 400, 433, 491, 724, 787 |
| Bse118I | RCCGGY | 2 cut(s) | 504, 966 |
| Bse1I | ACTGG | 4 cut(s) | 358, 496, 792, 866 |
| Bse8I | GATNNNNATC | 1 cut(s) | 282 |
| BseBI | CCWGG | 1 cut(s) | 748 |
| BseDI | CCNNGG | 2 cut(s) | 394, 395 |
| BseGI | GGATG | 3 cut(s) | 407, 420, 529 |
| BseJI | GATNNNNATC | 1 cut(s) | 282 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 205, 242, 400, 433, 491, 724, 787 |
| BseMII | CTCAG | 4 cut(s) | 75, 647, 699, 936 |
| BseNI | ACTGG | 4 cut(s) | 358, 496, 792, 866 |
| BseRI | GAGGAG | 3 cut(s) | 716, 899, 904 |
| BseXI | GCAGC | 1 cut(s) | 967 |
| Bsh1236I | CGCG | 3 cut(s) | 127, 129, 551 |
| BshFI | GGCC | 4 cut(s) | 5, 393, 953, 966 |
| BshTI | ACCGGT | 1 cut(s) | 504 |
| BsiHKCI | CYCGRG | 1 cut(s) | 394 |
| BsiSI | CCGG | 7 cut(s) | 158, 275, 395, 485, 505, 962, 967 |
| BslFI | GGGAC | 3 cut(s) | 416, 514, 560 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 205, 242, 400, 433, 491, 724, 787 |
| BsmAI | GTCTC | 5 cut(s) | 13, 179, 344, 698, 997 |
| BsmBI | CGTCTC | 1 cut(s) | 13 |
| BsmFI | GGGAC | 3 cut(s) | 416, 514, 560 |
| BsmI | GAATGC | 1 cut(s) | 742 |
| BsnI | GGCC | 4 cut(s) | 5, 393, 953, 966 |
| Bso31I | GGTCTC | 1 cut(s) | 997 |
| BsoBI | CYCGRG | 1 cut(s) | 394 |
| Bsp143I | GATC | 4 cut(s) | 120, 151, 441, 910 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 945 |
| BspACI | CCGC | 5 cut(s) | 107, 313, 328, 906, 978 |
| BspANI | GGCC | 4 cut(s) | 5, 393, 953, 966 |
| BspCNI | CTCAG | 4 cut(s) | 74, 648, 700, 937 |
| BspFNI | CGCG | 3 cut(s) | 127, 129, 551 |
| BspPI | GGATC | 2 cut(s) | 159, 436 |
| BspQI | GCTCTTC | 1 cut(s) | 634 |
| BspTNI | GGTCTC | 1 cut(s) | 997 |
| BsrBI | CCGCTC | 1 cut(s) | 315 |
| BsrFI | RCCGGY | 2 cut(s) | 504, 966 |
| BsrI | ACTGG | 4 cut(s) | 358, 496, 792, 866 |
| BssAI | RCCGGY | 2 cut(s) | 504, 966 |
| BssECI | CCNNGG | 2 cut(s) | 394, 395 |
| BssMI | GATC | 4 cut(s) | 120, 151, 441, 910 |
| BssNI | GRCGYC | 2 cut(s) | 45, 761 |
| Bst2UI | CCWGG | 1 cut(s) | 748 |
| Bst4CI | ACNGT | 3 cut(s) | 27, 104, 542 |
| Bst6I | CTCTTC | 2 cut(s) | 257, 634 |
| BstACI | GRCGYC | 2 cut(s) | 45, 761 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 325 |
| BstBAI | YACGTR | 4 cut(s) | 172, 191, 384, 1022 |
| BstC8I | GCNNGC | 4 cut(s) | 317, 664, 715, 951 |
| BstDEI | CTNAG | 4 cut(s) | 61, 656, 708, 945 |
| BstF5I | GGATG | 3 cut(s) | 407, 420, 529 |
| BstFNI | CGCG | 3 cut(s) | 127, 129, 551 |
| BstH2I | RGCGCY | 1 cut(s) | 452 |
| BstHHI | GCGC | 3 cut(s) | 129, 177, 451 |
| BstKTI | GATC | 4 cut(s) | 123, 154, 444, 913 |
| BstMAI | GTCTC | 5 cut(s) | 13, 179, 344, 698, 997 |
| BstMBI | GATC | 4 cut(s) | 120, 151, 441, 910 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 325, 620, 668, 950 |
| BstNI | CCWGG | 1 cut(s) | 748 |
| BstNSI | RCATGY | 2 cut(s) | 181, 567 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 191 |
| BstSCI | CCNGG | 7 cut(s) | 156, 273, 393, 394, 484, 746, 961 |
| BstSFI | CTRYAG | 1 cut(s) | 996 |
| BstSNI | TACGTA | 1 cut(s) | 1022 |
| BstUI | CGCG | 3 cut(s) | 127, 129, 551 |
| BstV1I | GCAGC | 1 cut(s) | 967 |
| BstV2I | GAAGAC | 1 cut(s) | 714 |
| BstX2I | RGATCY | 1 cut(s) | 151 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 635 |
| BstYI | RGATCY | 1 cut(s) | 151 |
| BsuRI | GGCC | 4 cut(s) | 5, 393, 953, 966 |
| BtsCI | GGATG | 3 cut(s) | 407, 420, 529 |
| BtsI | GCAGTG | 1 cut(s) | 618 |
| BtsIMutI | CAGTG | 3 cut(s) | 109, 547, 618 |
| Cac8I | GCNNGC | 4 cut(s) | 317, 664, 715, 951 |
| CfoI | GCGC | 3 cut(s) | 129, 177, 451 |
| Cfr10I | RCCGGY | 2 cut(s) | 504, 966 |
| Cfr13I | GGNCC | 3 cut(s) | 55, 392, 964 |
| Cfr9I | CCCGGG | 1 cut(s) | 394 |
| CseI | GACGC | 2 cut(s) | 557, 750 |
| Csp6I | GTAC | 5 cut(s) | 181, 346, 489, 778, 1019 |
| CspAI | ACCGGT | 1 cut(s) | 504 |
| CviAII | CATG | 4 cut(s) | 178, 389, 517, 564 |
| CviQI | GTAC | 5 cut(s) | 181, 346, 489, 778, 1019 |
| DdeI | CTNAG | 4 cut(s) | 61, 656, 708, 945 |
| DpnI | GATC | 4 cut(s) | 122, 153, 443, 912 |
| DpnII | GATC | 4 cut(s) | 120, 151, 441, 910 |
| DraI | TTTAAA | 2 cut(s) | 501, 802 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 107 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 107 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 257, 634 |
| EarI | CTCTTC | 2 cut(s) | 257, 634 |
| Eco105I | TACGTA | 1 cut(s) | 1022 |
| Eco31I | GGTCTC | 1 cut(s) | 997 |
| Eco47I | GGWCC | 1 cut(s) | 55 |
| Eco47III | AGCGCT | 1 cut(s) | 450 |
| Eco72I | CACGTG | 2 cut(s) | 191, 384 |
| Eco88I | CYCGRG | 1 cut(s) | 394 |
| EcoRII | CCWGG | 1 cut(s) | 746 |
| Esp3I | CGTCTC | 1 cut(s) | 13 |
| FaeI | CATG | 4 cut(s) | 181, 392, 520, 567 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 458, 490, 706, 738 |
| FaqI | GGGAC | 3 cut(s) | 416, 514, 560 |
| FatI | CATG | 4 cut(s) | 177, 388, 516, 563 |
| FblI | GTMKAC | 2 cut(s) | 99, 195 |
| Fnu4HI | GCNGC | 2 cut(s) | 329, 981 |
| FokI | GGATG | 3 cut(s) | 394, 407, 536 |
| Fsp4HI | GCNGC | 2 cut(s) | 329, 981 |
| FspAI | RTGCGCAY | 1 cut(s) | 176 |
| FspI | TGCGCA | 1 cut(s) | 176 |
| GlaI | GCGC | 3 cut(s) | 128, 176, 450 |
| GluI | GCNGC | 2 cut(s) | 329, 981 |
| HaeII | RGCGCY | 1 cut(s) | 452 |
| HaeIII | GGCC | 4 cut(s) | 5, 393, 953, 966 |
| HapII | CCGG | 7 cut(s) | 158, 275, 395, 485, 505, 962, 967 |
| HgaI | GACGC | 2 cut(s) | 557, 750 |
| HhaI | GCGC | 3 cut(s) | 129, 177, 451 |
| Hin1I | GRCGYC | 2 cut(s) | 45, 761 |
| Hin1II | CATG | 4 cut(s) | 181, 392, 520, 567 |
| Hin6I | GCGC | 3 cut(s) | 127, 175, 449 |
| HinP1I | GCGC | 3 cut(s) | 127, 175, 449 |
| HincII | GTYRAC | 4 cut(s) | 16, 100, 196, 573 |
| HindII | GTYRAC | 4 cut(s) | 16, 100, 196, 573 |
| HindIII | AAGCTT | 1 cut(s) | 795 |
| HinfI | GANTC | 4 cut(s) | 249, 404, 527, 652 |
| HpaII | CCGG | 7 cut(s) | 158, 275, 395, 485, 505, 962, 967 |
| Hpy166II | GTNNAC | 6 cut(s) | 16, 100, 196, 248, 573, 730 |
| Hpy188I | TCNGA | 6 cut(s) | 64, 221, 288, 590, 657, 855 |
| Hpy188III | TCNNGA | 2 cut(s) | 819, 871 |
| Hpy8I | GTNNAC | 6 cut(s) | 16, 100, 196, 248, 573, 730 |
| Hpy99I | CGWCG | 5 cut(s) | 31, 50, 101, 766, 901 |
| HpyAV | CCTTC | 3 cut(s) | 142, 221, 514 |
| HpyCH4III | ACNGT | 3 cut(s) | 27, 104, 542 |
| HpyCH4IV | ACGT | 6 cut(s) | 45, 171, 190, 383, 575, 1021 |
| HpyCH4V | TGCA | 3 cut(s) | 567, 666, 983 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 325, 620, 668, 950 |
| HpyF3I | CTNAG | 4 cut(s) | 61, 656, 708, 945 |
| HpySE526I | ACGT | 6 cut(s) | 45, 171, 190, 383, 575, 1021 |
| Hsp92I | GRCGYC | 2 cut(s) | 45, 761 |
| Hsp92II | CATG | 4 cut(s) | 181, 392, 520, 567 |
| HspAI | GCGC | 3 cut(s) | 127, 175, 449 |
| Kzo9I | GATC | 4 cut(s) | 120, 151, 441, 910 |
| LguI | GCTCTTC | 1 cut(s) | 634 |
| LmnI | GCTCC | 3 cut(s) | 221, 591, 769 |
| Lsp1109I | GCAGC | 1 cut(s) | 967 |
| MaeII | ACGT | 6 cut(s) | 45, 171, 190, 383, 575, 1021 |
| MalI | GATC | 4 cut(s) | 122, 153, 443, 912 |
| MbiI | CCGCTC | 1 cut(s) | 315 |
| MboI | GATC | 4 cut(s) | 120, 151, 441, 910 |
| MflI | RGATCY | 1 cut(s) | 151 |
| MluCI | AATT | 5 cut(s) | 85, 138, 604, 842, 875 |
| MluI | ACGCGT | 1 cut(s) | 549 |
| MlyI | GAGTC | 3 cut(s) | 243, 398, 536 |
| MmeI | TCCRAC | 2 cut(s) | 102, 199 |
| MnlI | CCTC | 9 cut(s) | 209, 235, 434, 604, 694, 703, 805, 877, 882 |
| MseI | TTAA | 4 cut(s) | 333, 477, 500, 801 |
| MslI | CAYNNNNRTG | 2 cut(s) | 170, 633 |
| MspA1I | CMGCKG | 1 cut(s) | 980 |
| MspI | CCGG | 7 cut(s) | 158, 275, 395, 485, 505, 962, 967 |
| MspR9I | CCNGG | 7 cut(s) | 158, 275, 395, 396, 486, 748, 963 |
| Mva1269I | GAATGC | 1 cut(s) | 742 |
| MvaI | CCWGG | 1 cut(s) | 748 |
| MvnI | CGCG | 3 cut(s) | 127, 129, 551 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 325, 620, 668, 950 |
| NciI | CCSGG | 6 cut(s) | 158, 275, 395, 396, 486, 963 |
| NdeII | GATC | 4 cut(s) | 120, 151, 441, 910 |
| NlaIII | CATG | 4 cut(s) | 181, 392, 520, 567 |
| NsbI | TGCGCA | 1 cut(s) | 176 |
| NspI | RCATGY | 2 cut(s) | 181, 567 |
| PciSI | GCTCTTC | 1 cut(s) | 634 |
| PctI | GAATGC | 1 cut(s) | 742 |
| PfeI | GAWTC | 1 cut(s) | 652 |
| PflFI | GACNNNGTC | 2 cut(s) | 200, 901 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 433 |
| PfoI | TCCNGGA | 3 cut(s) | 156, 273, 746 |
| PinAI | ACCGGT | 1 cut(s) | 504 |
| PkrI | GCNGC | 2 cut(s) | 330, 982 |
| PleI | GAGTC | 3 cut(s) | 243, 398, 535 |
| PmaCI | CACGTG | 2 cut(s) | 191, 384 |
| PmlI | CACGTG | 2 cut(s) | 191, 384 |
| PpsI | GAGTC | 3 cut(s) | 243, 398, 535 |
| Ppu21I | YACGTR | 4 cut(s) | 172, 191, 384, 1022 |
| PshAI | GACNNNNGTC | 1 cut(s) | 191 |
| Psp1406I | AACGTT | 1 cut(s) | 575 |
| Psp6I | CCWGG | 1 cut(s) | 746 |
| PspCI | CACGTG | 2 cut(s) | 191, 384 |
| PspGI | CCWGG | 1 cut(s) | 746 |
| PspPI | GGNCC | 3 cut(s) | 55, 392, 964 |
| PsuI | RGATCY | 1 cut(s) | 151 |
| PsyI | GACNNNGTC | 2 cut(s) | 200, 901 |
| RsaI | GTAC | 5 cut(s) | 182, 347, 490, 779, 1020 |
| RsaNI | GTAC | 5 cut(s) | 181, 346, 489, 778, 1019 |
| RseI | CAYNNNNRTG | 2 cut(s) | 170, 633 |
| SalI | GTCGAC | 2 cut(s) | 98, 194 |
| SapI | GCTCTTC | 1 cut(s) | 634 |
| SaqAI | TTAA | 4 cut(s) | 333, 477, 500, 801 |
| SatI | GCNGC | 2 cut(s) | 329, 981 |
| Sau3AI | GATC | 4 cut(s) | 120, 151, 441, 910 |
| Sau96I | GGNCC | 3 cut(s) | 55, 392, 964 |
| SchI | GAGTC | 3 cut(s) | 243, 398, 536 |
| ScrFI | CCNGG | 7 cut(s) | 158, 275, 395, 396, 486, 748, 963 |
| SfcI | CTRYAG | 1 cut(s) | 996 |
| SinI | GGWCC | 1 cut(s) | 55 |
| SmaI | CCCGGG | 1 cut(s) | 396 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 170, 633 |
| SmlI | CTYRAG | 1 cut(s) | 367 |
| SmoI | CTYRAG | 1 cut(s) | 367 |
| SnaBI | TACGTA | 1 cut(s) | 1022 |
| Sse9I | AATT | 5 cut(s) | 85, 138, 604, 842, 875 |
| SsiI | CCGC | 5 cut(s) | 107, 313, 328, 906, 978 |
| StyD4I | CCNGG | 7 cut(s) | 156, 273, 393, 394, 484, 746, 961 |
| TaaI | ACNGT | 3 cut(s) | 27, 104, 542 |
| TaiI | ACGT | 6 cut(s) | 48, 174, 193, 386, 578, 1024 |
| TaqI | TCGA | 7 cut(s) | 99, 195, 261, 440, 764, 820, 896 |
| TasI | AATT | 5 cut(s) | 85, 138, 604, 842, 875 |
| TauI | GCSGC | 1 cut(s) | 331 |
| TfiI | GAWTC | 1 cut(s) | 652 |
| Tru1I | TTAA | 4 cut(s) | 333, 477, 500, 801 |
| Tru9I | TTAA | 4 cut(s) | 333, 477, 500, 801 |
| TscAI | CASTG | 3 cut(s) | 109, 547, 625 |
| TseI | GCWGC | 1 cut(s) | 980 |
| TspDTI | ATGAA | 3 cut(s) | 296, 495, 533 |
| TspGWI | ACGGA | 1 cut(s) | 336 |
| TspMI | CCCGGG | 1 cut(s) | 394 |
| TspRI | CASTG | 3 cut(s) | 109, 547, 625 |
| Tth111I | GACNNNGTC | 2 cut(s) | 200, 901 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 433 |
| VpaK11BI | GGWCC | 1 cut(s) | 55 |
| XapI | RAATTY | 3 cut(s) | 138, 604, 842 |
| XceI | RCATGY | 2 cut(s) | 181, 567 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 539 |
| XmaI | CCCGGG | 1 cut(s) | 394 |
| XmiI | GTMKAC | 2 cut(s) | 99, 195 |
| ZraI | GACGTC | 1 cut(s) | 46 |