Prupe.1G549300_v2.0.a1

Elongation factor 1 gamma, conserved domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
44907599 .. 44912506
4908 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G549300.1

Sequence Viewer

Length: 1386 bp
ATGCATCACCACCGCACATATATTTCCCTCCACAAACCCTACCCATCATATACATCTCACCTTAGCTCTCTCTCTGTGCAACGGCTAGGCTTCGAAGATTGGACAATTATCGTTGACCCAATGGCTTTGGTGTTGCACGCGGGGAACACTAATAAAAATGGTTTCAAGGCACTTATTGCTGCCGAGTACAGTGGTGTCAAAGTTGAACTGGTGAAGAATTTTGAGATGGGTGTGTCCAACAAAAGTCCCAAGTTTCTTGAAATGAACCCCATTGGGAAGGTTCCTGTGTTAGAAACACCTGATGGACCTGTTTTTGAGAGTAATGCCATTGCACGCTATGTTACTCGGTTGAAGGCAGATAATCCTCTTTTTGGTTCTACCTTAATTGAATATGCTCATGTGGAGCAATGGATTGATTTTGCCACTTTGGAGATTGACGCCAATATTTTGCGATGGTTAATACCACGTATCGGTTTTGCTGTTTACCTTCCTCCGGCTGAGGAAGCTGCAATTTCTGCATTGAAGAGAGCGCTAACTGCTTTGAATACTCATCTTTCTTCCAACACGTACCTGGTCGGGCATTCTGTGACGTTGGCTGATATCATTATGGCATGTAATTTGACTCTGGGATTTAGCCGGTTATTGACAAAAAAATTTACCTCTGAATTTCCCCATGTTGAGAGATACTTTTGGACCTTGGTTAATCAGCCAAATTTTCGCAAGATATTGGGCGAAGTTAAACAAGCAGAATCTGTTCCATCTATTCAGTCAGCAAAGAAGCCTTCACAGGCAAAGGAACCCACAAAACCTAAGGATGAACCAAAGAAAGAGGCCAAGAAAGAACCAGCGAAGCCTAAATTAGAAGAGGCTGTTGCTGAAGAAGAGGCACCCAAGCCCAAGGCAAAGAATTCTCTTGATCTTTTGCCTCCTAGCAAGATGATTCTGGATGAATGGAAAAGGCTTTATTCAAACACAAAGACCAACTTCCGTGAGGTTGCTGTTAAAGGATTCTGGGACATGTACGATCCAGAGGGTTACTCTCTTTGGTTCTGCGATTACAAGTACAATGATGAAAATACTGTATCATTTGTGACTTTGAACAAGGTGGGTGGTTTCCTGCAGCGGATGGATTTGGCTCGTAAGTATGCATTTGGGAAGATGTTGGTGATTGGCTCGGAGCCTCCATTTAAGGTTAAGGGCTTGTGGCTCTTCCGGGGACAAGAAATTCCAAAATTCATAATTGACGAGTGTTATGACATGGAACTGTATGACTGGCGTAAGGTTGACATCACTGATGAGGATCAAAAGGAGCGCGTTAATCAGATGATTGAAGATCAGGAGCCTTTTGAGGGGGAGGCTTTGTTGGATGCCAAATGTTTCAAGTGA

Protein Analysis

462

Amino Acids

52.67

Weight (kDa)

6.59

Isoelectric Point (pI)

39.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 886
AccII CGCG 2 cut(s) 140, 1314
AciI CCGC 3 cut(s) 13, 140, 1123
AclWI GGATC 2 cut(s) 1019, 1308
AcsI RAATTY 7 cut(s) 217, 653, 665, 712, 907, 1224, 1232
AcuI CTGAAG 1 cut(s) 897
AcyI GRCGYC 1 cut(s) 438
AfaI GTAC 4 cut(s) 188, 569, 1022, 1064
AfeI AGCGCT 1 cut(s) 531
AfiI CCNNNNNNNGG 4 cut(s) 371, 470, 493, 1349
AflIII ACRYGT 2 cut(s) 564, 1017
AjnI CCWGG 1 cut(s) 570
AluBI AGCT 2 cut(s) 66, 506
AluI AGCT 2 cut(s) 66, 506
AlwI GGATC 2 cut(s) 1019, 1308
AlwNI CAGNNNCTG 1 cut(s) 752
Aor51HI AGCGCT 1 cut(s) 531
AoxI GGCC 1 cut(s) 831
ApeKI GCWGC 3 cut(s) 179, 506, 1120
ApoI RAATTY 7 cut(s) 217, 653, 665, 712, 907, 1224, 1232
Asp700I GAANNNNTTC 1 cut(s) 753
AspLEI GCGC 2 cut(s) 532, 1314
AspS9I GGNCC 2 cut(s) 305, 693
AsuC2I CCSGG 1 cut(s) 1214
AsuHPI GGTGA 3 cut(s) 50, 223, 1177
AsuII TTCGAA 1 cut(s) 93
AvaII GGWCC 2 cut(s) 305, 693
AxyI CCTNAGG 1 cut(s) 810
BanI GGYRCC 1 cut(s) 886
BbvCI CCTCAGC 1 cut(s) 498
BbvI GCAGC 3 cut(s) 166, 493, 1132
BccI CCATC 6 cut(s) 52, 220, 296, 447, 766, 1120
BceAI ACGGC 1 cut(s) 98
BciT130I CCWGG 1 cut(s) 572
BcnI CCSGG 1 cut(s) 1214
BfaI CTAG 2 cut(s) 86, 930
BfmI CTRYAG 1 cut(s) 1118
BfoI RGCGCY 1 cut(s) 533
BisI GCNGC 3 cut(s) 180, 507, 1121
BlsI GCNGC 3 cut(s) 181, 508, 1122
Bme1390I CCNGG 2 cut(s) 572, 1214
Bme18I GGWCC 2 cut(s) 305, 693
BmgT120I GGNCC 2 cut(s) 305, 693
BmiI GGNNCC 5 cut(s) 282, 798, 888, 1179, 1341
BmrFI CCNGG 2 cut(s) 572, 1214
BmsI GCATC 2 cut(s) 13, 1357
BplI GAGNNNNNCTC 2 cut(s) 1022, 1054
Bpu10I CCTNAGC 2 cut(s) 62, 498
Bpu14I TTCGAA 1 cut(s) 93
BpuMI CCSGG 1 cut(s) 1214
BsaAI YACGTR 2 cut(s) 467, 567
BsaBI GATNNNNATC 1 cut(s) 1299
BsaHI GRCGYC 1 cut(s) 438
BsaJI CCNNGG 3 cut(s) 696, 897, 1213
BsaXI ACNNNNNCTCC 2 cut(s) 1346, 1376
Bsc4I CCNNNNNNNGG 4 cut(s) 371, 470, 493, 1349
Bse118I RCCGGY 1 cut(s) 636
Bse1I ACTGG 2 cut(s) 213, 1277
Bse21I CCTNAGG 1 cut(s) 810
Bse3DI GCAATG 2 cut(s) 327, 413
Bse8I GATNNNNATC 1 cut(s) 1299
BseBI CCWGG 1 cut(s) 572
BseDI CCNNGG 3 cut(s) 696, 897, 1213
BseGI GGATG 4 cut(s) 820, 952, 1131, 1372
BseJI GATNNNNATC 1 cut(s) 1299
BseLI CCNNNNNNNGG 4 cut(s) 371, 470, 493, 1349
BseMI GCAATG 2 cut(s) 327, 413
BseMII CTCAG 1 cut(s) 489
BseNI ACTGG 2 cut(s) 213, 1277
BseXI GCAGC 3 cut(s) 166, 493, 1132
Bsh1236I CGCG 2 cut(s) 140, 1314
BshFI GGCC 1 cut(s) 833
BshNI GGYRCC 1 cut(s) 886
BsiSI CCGG 3 cut(s) 494, 637, 1213
BslFI GGGAC 3 cut(s) 231, 1028, 1230
BslI CCNNNNNNNGG 4 cut(s) 371, 470, 493, 1349
BsmFI GGGAC 3 cut(s) 231, 1028, 1230
BsmI GAATGC 1 cut(s) 580
BsnI GGCC 1 cut(s) 833
Bsp119I TTCGAA 1 cut(s) 93
Bsp143I GATC 4 cut(s) 916, 1024, 1300, 1333
BspACI CCGC 3 cut(s) 13, 140, 1123
BspANI GGCC 1 cut(s) 833
BspCNI CTCAG 1 cut(s) 490
BspFNI CGCG 2 cut(s) 140, 1314
BspLI GGNNCC 5 cut(s) 282, 798, 888, 1179, 1341
BspMAI CTGCAG 1 cut(s) 1122
BspPI GGATC 2 cut(s) 1019, 1308
BspQI GCTCTTC 1 cut(s) 1214
BspT104I TTCGAA 1 cut(s) 93
BspT107I GGYRCC 1 cut(s) 886
BsrDI GCAATG 2 cut(s) 327, 413
BsrFI RCCGGY 1 cut(s) 636
BsrI ACTGG 2 cut(s) 213, 1277
BssAI RCCGGY 1 cut(s) 636
BssECI CCNNGG 3 cut(s) 696, 897, 1213
BssMI GATC 4 cut(s) 916, 1024, 1300, 1333
BssNI GRCGYC 1 cut(s) 438
BssT1I CCWWGG 2 cut(s) 696, 897
Bst2UI CCWGG 1 cut(s) 572
Bst4CI ACNGT 3 cut(s) 191, 1081, 1266
Bst6I CTCTTC 4 cut(s) 518, 858, 876, 1214
BstACI GRCGYC 1 cut(s) 438
BstAPI GCANNNNNTGC 2 cut(s) 176, 515
BstBAI YACGTR 2 cut(s) 467, 567
BstBI TTCGAA 1 cut(s) 93
BstC8I GCNNGC 2 cut(s) 138, 334
BstDEI CTNAG 3 cut(s) 62, 498, 810
BstF5I GGATG 4 cut(s) 820, 952, 1131, 1372
BstFNI CGCG 2 cut(s) 140, 1314
BstH2I RGCGCY 1 cut(s) 533
BstHHI GCGC 2 cut(s) 532, 1314
BstKTI GATC 4 cut(s) 919, 1027, 1303, 1336
BstMBI GATC 4 cut(s) 916, 1024, 1300, 1333
BstMWI GCNNNNNNNGC 4 cut(s) 176, 503, 515, 536
BstNI CCWGG 1 cut(s) 572
BstNSI RCATGY 2 cut(s) 615, 1021
BstSCI CCNGG 2 cut(s) 570, 1212
BstSFI CTRYAG 1 cut(s) 1118
BstUI CGCG 2 cut(s) 140, 1314
BstV1I GCAGC 3 cut(s) 166, 493, 1132
Bsu36I CCTNAGG 1 cut(s) 810
BsuRI GGCC 1 cut(s) 833
BtgZI GCGATG 1 cut(s) 466
BtsCI GGATG 4 cut(s) 820, 952, 1131, 1372
BtsIMutI CAGTG 2 cut(s) 196, 1290
Cac8I GCNNGC 2 cut(s) 138, 334
CaiI CAGNNNCTG 1 cut(s) 752
CfoI GCGC 2 cut(s) 532, 1314
Cfr10I RCCGGY 1 cut(s) 636
Cfr13I GGNCC 2 cut(s) 305, 693
CseI GACGC 1 cut(s) 446
CsiI ACCWGGT 1 cut(s) 570
Csp6I GTAC 4 cut(s) 187, 568, 1021, 1063
CspCI CAANNNNNGTGG 2 cut(s) 1090, 1125
CviAII CATG 5 cut(s) 398, 612, 674, 1018, 1258
CviQI GTAC 4 cut(s) 187, 568, 1021, 1063
DdeI CTNAG 3 cut(s) 62, 498, 810
DpnI GATC 4 cut(s) 918, 1026, 1302, 1335
DpnII GATC 4 cut(s) 916, 1024, 1300, 1333
Eam1104I CTCTTC 4 cut(s) 518, 858, 876, 1214
EarI CTCTTC 4 cut(s) 518, 858, 876, 1214
Eco130I CCWWGG 2 cut(s) 696, 897
Eco32I GATATC 1 cut(s) 601
Eco47I GGWCC 2 cut(s) 305, 693
Eco47III AGCGCT 1 cut(s) 531
Eco57I CTGAAG 1 cut(s) 897
Eco81I CCTNAGG 1 cut(s) 810
EcoRI GAATTC 1 cut(s) 907
EcoRII CCWGG 1 cut(s) 570
EcoRV GATATC 1 cut(s) 601
EcoT14I CCWWGG 2 cut(s) 696, 897
EcoT22I ATGCAT 2 cut(s) 6, 1150
ErhI CCWWGG 2 cut(s) 696, 897
FaeI CATG 5 cut(s) 401, 615, 677, 1021, 1261
FalI AAGNNNNNCTT 2 cut(s) 968, 1000
FaqI GGGAC 3 cut(s) 231, 1028, 1230
FatI CATG 5 cut(s) 397, 611, 673, 1017, 1257
FauI CCCGC 1 cut(s) 133
Fnu4HI GCNGC 3 cut(s) 180, 507, 1121
FokI GGATG 4 cut(s) 827, 959, 1138, 1379
Fsp4HI GCNGC 3 cut(s) 180, 507, 1121
FspBI CTAG 2 cut(s) 86, 930
GlaI GCGC 2 cut(s) 531, 1313
GluI GCNGC 3 cut(s) 180, 507, 1121
HaeII RGCGCY 1 cut(s) 533
HaeIII GGCC 1 cut(s) 833
HapII CCGG 3 cut(s) 494, 637, 1213
HgaI GACGC 1 cut(s) 446
HhaI GCGC 2 cut(s) 532, 1314
Hin1I GRCGYC 1 cut(s) 438
Hin1II CATG 5 cut(s) 401, 615, 677, 1021, 1261
Hin6I GCGC 2 cut(s) 530, 1312
HinP1I GCGC 2 cut(s) 530, 1312
HincII GTYRAC 2 cut(s) 115, 1285
HindII GTYRAC 2 cut(s) 115, 1285
HinfI GANTC 4 cut(s) 622, 749, 940, 1008
HpaII CCGG 3 cut(s) 494, 637, 1213
HphI GGTGA 3 cut(s) 50, 223, 1177
Hpy166II GTNNAC 3 cut(s) 115, 484, 1285
Hpy188I TCNGA 3 cut(s) 664, 1177, 1323
Hpy188III TCNNGA 5 cut(s) 257, 914, 944, 1028, 1337
Hpy8I GTNNAC 3 cut(s) 115, 484, 1285
HpyAV CCTTC 4 cut(s) 271, 346, 497, 792
HpyCH4III ACNGT 3 cut(s) 191, 1081, 1266
HpyCH4IV ACGT 3 cut(s) 466, 566, 590
HpyCH4V TGCA 8 cut(s) 4, 79, 136, 332, 509, 518, 1120, 1148
HpyF10VI GCNNNNNNNGC 4 cut(s) 176, 503, 515, 536
HpyF3I CTNAG 3 cut(s) 62, 498, 810
HpySE526I ACGT 3 cut(s) 466, 566, 590
Hsp92I GRCGYC 1 cut(s) 438
Hsp92II CATG 5 cut(s) 401, 615, 677, 1021, 1261
HspAI GCGC 2 cut(s) 530, 1312
Kzo9I GATC 4 cut(s) 916, 1024, 1300, 1333
LguI GCTCTTC 1 cut(s) 1214
LmnI GCTCC 4 cut(s) 403, 1177, 1309, 1339
Lsp1109I GCAGC 3 cut(s) 166, 493, 1132
LweI GCATC 2 cut(s) 13, 1357
MabI ACCWGGT 1 cut(s) 570
MaeI CTAG 2 cut(s) 86, 930
MaeII ACGT 3 cut(s) 466, 566, 590
MaeIII GTNAC 4 cut(s) 340, 586, 1034, 1090
MalI GATC 4 cut(s) 918, 1026, 1302, 1335
MboI GATC 4 cut(s) 916, 1024, 1300, 1333
MlyI GAGTC 1 cut(s) 616
MmeI TCCRAC 3 cut(s) 261, 585, 1344
Mph1103I ATGCAT 2 cut(s) 6, 1150
MroXI GAANNNNTTC 1 cut(s) 753
MseI TTAA 8 cut(s) 383, 458, 702, 738, 1002, 1188, 1194, 1317
MspA1I CMGCKG 1 cut(s) 1123
MspI CCGG 3 cut(s) 494, 637, 1213
MspR9I CCNGG 2 cut(s) 572, 1214
Mva1269I GAATGC 1 cut(s) 580
MvaI CCWGG 1 cut(s) 572
MvnI CGCG 2 cut(s) 140, 1314
MwoI GCNNNNNNNGC 4 cut(s) 176, 503, 515, 536
NciI CCSGG 1 cut(s) 1214
NdeII GATC 4 cut(s) 916, 1024, 1300, 1333
NlaIII CATG 5 cut(s) 401, 615, 677, 1021, 1261
NlaIV GGNNCC 5 cut(s) 282, 798, 888, 1179, 1341
NmeAIII GCCGAG 1 cut(s) 208
NmuCI GTSAC 2 cut(s) 586, 1090
NsiI ATGCAT 2 cut(s) 6, 1150
NspI RCATGY 2 cut(s) 615, 1021
NspV TTCGAA 1 cut(s) 93
PciI ACATGT 1 cut(s) 1017
PciSI GCTCTTC 1 cut(s) 1214
PctI GAATGC 1 cut(s) 580
PdmI GAANNNNTTC 1 cut(s) 753
PfeI GAWTC 3 cut(s) 749, 940, 1008
PkrI GCNGC 3 cut(s) 181, 508, 1122
PleI GAGTC 1 cut(s) 616
PpsI GAGTC 1 cut(s) 616
Ppu21I YACGTR 2 cut(s) 467, 567
PscI ACATGT 1 cut(s) 1017
Psp6I CCWGG 1 cut(s) 570
PspGI CCWGG 1 cut(s) 570
PspN4I GGNNCC 5 cut(s) 282, 798, 888, 1179, 1341
PspPI GGNCC 2 cut(s) 305, 693
PstI CTGCAG 1 cut(s) 1122
PstNI CAGNNNCTG 1 cut(s) 752
RsaI GTAC 4 cut(s) 188, 569, 1022, 1064
RsaNI GTAC 4 cut(s) 187, 568, 1021, 1063
SapI GCTCTTC 1 cut(s) 1214
SaqAI TTAA 8 cut(s) 383, 458, 702, 738, 1002, 1188, 1194, 1317
SatI GCNGC 3 cut(s) 180, 507, 1121
Sau3AI GATC 4 cut(s) 916, 1024, 1300, 1333
Sau96I GGNCC 2 cut(s) 305, 693
SchI GAGTC 1 cut(s) 616
ScrFI CCNGG 2 cut(s) 572, 1214
SexAI ACCWGGT 1 cut(s) 570
SfaNI GCATC 2 cut(s) 13, 1357
SfcI CTRYAG 1 cut(s) 1118
SfuI TTCGAA 1 cut(s) 93
SinI GGWCC 2 cut(s) 305, 693
SsiI CCGC 3 cut(s) 13, 140, 1123
SspI AATATT 1 cut(s) 445
SspMI CTAG 2 cut(s) 86, 930
StyD4I CCNGG 2 cut(s) 570, 1212
StyI CCWWGG 2 cut(s) 696, 897
TaaI ACNGT 3 cut(s) 191, 1081, 1266
TaiI ACGT 3 cut(s) 469, 569, 593
TaqI TCGA 1 cut(s) 93
TatI WGTACW 2 cut(s) 186, 1062
TfiI GAWTC 3 cut(s) 749, 940, 1008
Tru1I TTAA 8 cut(s) 383, 458, 702, 738, 1002, 1188, 1194, 1317
Tru9I TTAA 8 cut(s) 383, 458, 702, 738, 1002, 1188, 1194, 1317
TscAI CASTG 2 cut(s) 196, 1297
TseFI GTSAC 2 cut(s) 586, 1090
TseI GCWGC 3 cut(s) 179, 506, 1120
Tsp45I GTSAC 2 cut(s) 586, 1090
TspDTI ATGAA 5 cut(s) 278, 831, 963, 1086, 1225
TspGWI ACGGA 1 cut(s) 977
TspRI CASTG 2 cut(s) 196, 1297
VpaK11BI GGWCC 2 cut(s) 305, 693
XapI RAATTY 7 cut(s) 217, 653, 665, 712, 907, 1224, 1232
XceI RCATGY 2 cut(s) 615, 1021
XcmI CCANNNNNNNNNTGG 1 cut(s) 568
XmnI GAANNNNTTC 1 cut(s) 753
XspI CTAG 2 cut(s) 86, 930
Zsp2I ATGCAT 2 cut(s) 6, 1150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.