Prupe.1G581500_v2.0.a1

Elongation factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
47258133 .. 47261474
3342 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G581500.2

Sequence Viewer

Length: 1419 bp
ATGGTCATTTTCAGTCGCAACAAAAACCCTAGCCAGCATTCCCTATATTGTCTCTTGCTCTCTCACTCATTTGCATCACTTGTGCTCTCACGGAAGAACGCTCCGCCTCACAGATCTCAAGTCAGAGCGAAACGTTTTTCCGCAAAAGCCATGGCTCTGGTCTTGCATGCAGGGAAGACAAACAAAAATGCTTTCAAGACCCTCATAGTTGCGGAGTACACTGGTGTAAAAGTTGAACTTGCACCTGATTTTGAGATGGGTGTCACCAACAAGACTCCTGAATATTTGAAGTTAAACCCTATTGGGAAGGTTCCCCTGCTGGTAACACCTGATGGTCCCATCTTTGAGAGTAACGCCATTGCACGTTATGTTGCTCGCTTGAAGGCTGACAATCCTCTTATTGGTTCTTCTCTGATTGATTATGCCCATATCGAGCAATGGATTGATTTTGGATCATTGGAGATTGATGCTAACATAATTAGCTGGTTTAGACCAAGATTCGGATCTGCTGTGTACCTTCCTCCAGCTGAGGAAGCTGCGATTTCTGCTTTAAAGAGAGCGCTAGGTGCCTTGAATACCCATCTTGCTTCGAACACATACCTAGTTGGTCATTTTGTAACCCTTGCTGACATTATTGTCACATGCAATTTGTTGATTGGGTTCACCAAGCTCATGACAAAGAGCTTCACTTCGGAATTCCCCCATGTTGAGAGATACTTCTGGACCCTGGTCAATCAACCAAACTTCAAAAAGGTATTGGGTGATGTCAAGCAGACTGAATCTGTTCCACCTGTTCCATCCGCAAAGAAGCCTTCCCAGCCCAAAGAAACTAAATCCAAGGCCAAGGAGGAGCCCAAGAAAGAAGCCAAAAAGGAGCCAGCAAAACCCAAAGCAGAAGCTGCTGAGGAAGTGGAAGAGGCACCAAAGCCAAAACCCAAGAATCCTCTTGATCTGCTGCCCCCAAGCGGTATGGTATTGGATGACTGGAAGAGACTTTACTCTAACACAAAGACCAACTTCCGTGAGGTTGCTATTAAAGGATTCTGGGACATGTACGATCCTGAGGGATATTCACTTTGGTTCTGTGAGTACAAGTACAATGATGAAAATACTGTATCCTTTGTGACACTGAACAAGGTCGGTGGATTTCTTCAGCGCATGGATCTGGCCCGCAAGTATGCTTTTGGGAAGATGCTAGTGATAGGCTCAGAGCCACCATTTAAGGTGAAAGGGTTGTGGCTCTTCCGTGGGCAAGAAATTCCTCCATTTGTGATGGAGGAGTGCTATGACATGGAGCTCTACAATTGGACAAAGGTTGACCTTTCAGATGAAAACCAGAAGGAGCGTGTCAACCAGATGATTGAAGACCAGGAGCCTTTTGAGGGCGAGGTTCTGTTGGATGCCAAGTGCTTTAAGTGA

Protein Analysis

473

Amino Acids

53.45

Weight (kDa)

8.74

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 635
AccB1I GGYRCC 2 cut(s) 566, 919
AciI CCGC 6 cut(s) 104, 141, 212, 801, 966, 1171
AclI AACGTT 1 cut(s) 133
AclWI GGATC 4 cut(s) 460, 511, 1052, 1170
AcsI RAATTY 2 cut(s) 695, 1257
AcuI CTGAAG 1 cut(s) 1136
AfaI GTAC 5 cut(s) 218, 515, 1055, 1091, 1097
AfeI AGCGCT 1 cut(s) 561
AfiI CCNNNNNNNGG 4 cut(s) 401, 500, 965, 1382
AflIII ACRYGT 1 cut(s) 1050
AgsI TTSAA 7 cut(s) 196, 236, 289, 382, 574, 748, 1364
AjnI CCWGG 2 cut(s) 726, 1368
AluBI AGCT 7 cut(s) 483, 527, 536, 670, 684, 899, 1297
AluI AGCT 7 cut(s) 483, 527, 536, 670, 684, 899, 1297
Alw21I GWGCWC 2 cut(s) 87, 1299
Alw26I GTCTC 2 cut(s) 56, 985
AlwI GGATC 4 cut(s) 460, 511, 1052, 1170
AlwNI CAGNNNCTG 1 cut(s) 899
Aor51HI AGCGCT 1 cut(s) 561
AoxI GGCC 2 cut(s) 840, 1167
ApeKI GCWGC 3 cut(s) 536, 899, 955
ApoI RAATTY 2 cut(s) 695, 1257
Asp700I GAANNNNTTC 1 cut(s) 783
AspLEI GCGC 2 cut(s) 562, 1158
AspS9I GGNCC 3 cut(s) 335, 723, 1168
AsuHPI GGTGA 4 cut(s) 256, 655, 773, 1237
AsuII TTCGAA 1 cut(s) 590
AvaII GGWCC 2 cut(s) 335, 723
AxyI CCTNAGG 1 cut(s) 1062
BanI GGYRCC 2 cut(s) 566, 919
BanII GRGCYC 2 cut(s) 855, 1299
BarI GAAGNNNNNNTAC 2 cut(s) 980, 1012
BbsI GAAGAC 2 cut(s) 182, 1371
Bbv12I GWGCWC 2 cut(s) 87, 1299
BbvCI CCTCAGC 2 cut(s) 528, 903
BbvI GCAGC 3 cut(s) 523, 886, 942
BccI CCATC 6 cut(s) 250, 326, 347, 588, 805, 1267
BciT130I CCWGG 2 cut(s) 728, 1370
BciVI GTATCC 1 cut(s) 1126
BcoDI GTCTC 2 cut(s) 56, 985
BfaI CTAG 4 cut(s) 30, 563, 602, 1196
BfoI RGCGCY 1 cut(s) 563
BfuI GTATCC 1 cut(s) 1126
BglII AGATCT 1 cut(s) 113
BisI GCNGC 3 cut(s) 537, 900, 956
BlsI GCNGC 3 cut(s) 538, 901, 957
Bme1390I CCNGG 2 cut(s) 728, 1370
Bme18I GGWCC 2 cut(s) 335, 723
BmgT120I GGNCC 3 cut(s) 335, 723, 1168
BmiI GGNNCC 8 cut(s) 312, 337, 568, 725, 852, 876, 921, 1374
BmrFI CCNGG 2 cut(s) 728, 1370
BmsI GCATC 4 cut(s) 83, 457, 1182, 1390
BoxI GACNNNNGTC 1 cut(s) 728
BpiI GAAGAC 2 cut(s) 182, 1371
BpmI CTGGAG 1 cut(s) 507
Bpu10I CCTNAGC 2 cut(s) 528, 903
Bpu14I TTCGAA 1 cut(s) 590
BpuEI CTTGAG 1 cut(s) 102
BsaBI GATNNNNATC 1 cut(s) 502
BsaJI CCNNGG 5 cut(s) 150, 726, 837, 843, 1246
Bsc4I CCNNNNNNNGG 4 cut(s) 401, 500, 965, 1382
Bse1I ACTGG 2 cut(s) 226, 989
Bse21I CCTNAGG 1 cut(s) 1062
Bse3DI GCAATG 2 cut(s) 357, 443
Bse8I GATNNNNATC 1 cut(s) 502
BseBI CCWGG 2 cut(s) 728, 1370
BseDI CCNNGG 5 cut(s) 150, 726, 837, 843, 1246
BseGI GGATG 3 cut(s) 797, 985, 1405
BseJI GATNNNNATC 1 cut(s) 502
BseLI CCNNNNNNNGG 4 cut(s) 401, 500, 965, 1382
BseMI GCAATG 2 cut(s) 357, 443
BseMII CTCAG 4 cut(s) 519, 894, 1053, 1221
BseNI ACTGG 2 cut(s) 226, 989
BseRI GAGGAG 2 cut(s) 863, 1292
BseXI GCAGC 3 cut(s) 523, 886, 942
BseYI CCCAGC 1 cut(s) 816
BshFI GGCC 2 cut(s) 842, 1169
BshNI GGYRCC 2 cut(s) 566, 919
BsiHKAI GWGCWC 2 cut(s) 87, 1299
BslFI GGGAC 2 cut(s) 321, 1061
BslI CCNNNNNNNGG 4 cut(s) 401, 500, 965, 1382
BsmAI GTCTC 2 cut(s) 56, 985
BsmFI GGGAC 2 cut(s) 321, 1061
BsmI GAATGC 1 cut(s) 37
BsnI GGCC 2 cut(s) 842, 1169
Bsp119I TTCGAA 1 cut(s) 590
Bsp1286I GDGCHC 3 cut(s) 87, 855, 1299
Bsp143I GATC 6 cut(s) 113, 452, 503, 949, 1057, 1162
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 6 cut(s) 104, 141, 212, 801, 966, 1171
BspANI GGCC 2 cut(s) 842, 1169
BspCNI CTCAG 4 cut(s) 520, 895, 1054, 1220
BspHI TCATGA 1 cut(s) 672
BspLI GGNNCC 8 cut(s) 312, 337, 568, 725, 852, 876, 921, 1374
BspPI GGATC 4 cut(s) 460, 511, 1052, 1170
BspQI GCTCTTC 1 cut(s) 1247
BspT104I TTCGAA 1 cut(s) 590
BspT107I GGYRCC 2 cut(s) 566, 919
BsrDI GCAATG 2 cut(s) 357, 443
BsrI ACTGG 2 cut(s) 226, 989
BssECI CCNNGG 5 cut(s) 150, 726, 837, 843, 1246
BssMI GATC 6 cut(s) 113, 452, 503, 949, 1057, 1162
BssT1I CCWWGG 3 cut(s) 150, 837, 843
Bst2UI CCWGG 2 cut(s) 728, 1370
Bst4CI ACNGT 1 cut(s) 1114
Bst6I CTCTTC 3 cut(s) 909, 983, 1247
BstAPI GCANNNNNTGC 1 cut(s) 899
BstBI TTCGAA 1 cut(s) 590
BstC8I GCNNGC 5 cut(s) 35, 168, 376, 879, 1171
BstDEI CTNAG 4 cut(s) 528, 903, 1062, 1207
BstDSI CCRYGG 2 cut(s) 150, 1246
BstF5I GGATG 3 cut(s) 797, 985, 1405
BstH2I RGCGCY 1 cut(s) 563
BstHHI GCGC 2 cut(s) 562, 1158
BstKTI GATC 6 cut(s) 116, 455, 506, 952, 1060, 1165
BstMAI GTCTC 2 cut(s) 56, 985
BstMBI GATC 6 cut(s) 113, 452, 503, 949, 1057, 1162
BstMWI GCNNNNNNNGC 5 cut(s) 533, 545, 566, 817, 899
BstNI CCWGG 2 cut(s) 728, 1370
BstNSI RCATGY 3 cut(s) 170, 645, 1054
BstPAI GACNNNNGTC 1 cut(s) 728
BstSCI CCNGG 2 cut(s) 726, 1368
BstV1I GCAGC 3 cut(s) 523, 886, 942
BstV2I GAAGAC 2 cut(s) 182, 1371
BstX2I RGATCY 3 cut(s) 113, 503, 1162
BstXI CCANNNNNNTGG 1 cut(s) 157
BstYI RGATCY 3 cut(s) 113, 503, 1162
Bsu36I CCTNAGG 1 cut(s) 1062
BsuI GTATCC 1 cut(s) 1126
BsuRI GGCC 2 cut(s) 842, 1169
BtgI CCRYGG 2 cut(s) 150, 1246
BtsCI GGATG 3 cut(s) 797, 985, 1405
BtsIMutI CAGTG 2 cut(s) 219, 1127
Cac8I GCNNGC 5 cut(s) 35, 168, 376, 879, 1171
CaiI CAGNNNCTG 1 cut(s) 899
CciI TCATGA 1 cut(s) 672
CfoI GCGC 2 cut(s) 562, 1158
Cfr13I GGNCC 3 cut(s) 335, 723, 1168
Csp6I GTAC 5 cut(s) 217, 514, 1054, 1090, 1096
CspCI CAANNNNNGTGG 2 cut(s) 1123, 1158
CviAII CATG 8 cut(s) 151, 167, 642, 673, 704, 1051, 1159, 1291
CviQI GTAC 5 cut(s) 217, 514, 1054, 1090, 1096
DdeI CTNAG 4 cut(s) 528, 903, 1062, 1207
DpnI GATC 6 cut(s) 115, 454, 505, 951, 1059, 1164
DpnII GATC 6 cut(s) 113, 452, 503, 949, 1057, 1162
DraI TTTAAA 1 cut(s) 552
DrdI GACNNNNNNGTC 1 cut(s) 635
DseDI GACNNNNNNGTC 1 cut(s) 635
Eam1104I CTCTTC 3 cut(s) 909, 983, 1247
EarI CTCTTC 3 cut(s) 909, 983, 1247
EciI GGCGGA 1 cut(s) 93
Ecl136II GAGCTC 1 cut(s) 1297
Eco130I CCWWGG 3 cut(s) 150, 837, 843
Eco24I GRGCYC 2 cut(s) 855, 1299
Eco47I GGWCC 2 cut(s) 335, 723
Eco47III AGCGCT 1 cut(s) 561
Eco53kI GAGCTC 1 cut(s) 1297
Eco57I CTGAAG 1 cut(s) 1136
Eco81I CCTNAGG 1 cut(s) 1062
EcoICRI GAGCTC 1 cut(s) 1297
EcoRI GAATTC 1 cut(s) 695
EcoRII CCWGG 2 cut(s) 726, 1368
EcoT14I CCWWGG 3 cut(s) 150, 837, 843
EcoT38I GRGCYC 2 cut(s) 855, 1299
ErhI CCWWGG 3 cut(s) 150, 837, 843
FaeI CATG 8 cut(s) 154, 170, 645, 676, 707, 1054, 1162, 1294
FalI AAGNNNNNCTT 4 cut(s) 222, 254, 1001, 1033
FaqI GGGAC 2 cut(s) 321, 1061
FatI CATG 8 cut(s) 150, 166, 641, 672, 703, 1050, 1158, 1290
FauI CCCGC 1 cut(s) 1178
Fnu4HI GCNGC 3 cut(s) 537, 900, 956
FokI GGATG 3 cut(s) 784, 992, 1412
FriOI GRGCYC 2 cut(s) 855, 1299
Fsp4HI GCNGC 3 cut(s) 537, 900, 956
FspBI CTAG 4 cut(s) 30, 563, 602, 1196
GlaI GCGC 2 cut(s) 561, 1157
GluI GCNGC 3 cut(s) 537, 900, 956
GsaI CCCAGC 1 cut(s) 820
GsuI CTGGAG 1 cut(s) 507
HaeII RGCGCY 1 cut(s) 563
HaeIII GGCC 2 cut(s) 842, 1169
HhaI GCGC 2 cut(s) 562, 1158
Hin1II CATG 8 cut(s) 154, 170, 645, 676, 707, 1054, 1162, 1294
Hin6I GCGC 2 cut(s) 560, 1156
HinP1I GCGC 2 cut(s) 560, 1156
HincII GTYRAC 2 cut(s) 1318, 1351
HindII GTYRAC 2 cut(s) 1318, 1351
HinfI GANTC 5 cut(s) 274, 498, 779, 940, 1041
HphI GGTGA 4 cut(s) 256, 655, 773, 1237
Hpy166II GTNNAC 5 cut(s) 219, 514, 663, 1318, 1351
Hpy188I TCNGA 6 cut(s) 125, 414, 503, 694, 1210, 1327
Hpy188III TCNNGA 6 cut(s) 196, 278, 673, 721, 947, 1061
Hpy8I GTNNAC 5 cut(s) 219, 514, 663, 1318, 1351
HpyAV CCTTC 5 cut(s) 301, 376, 527, 822, 1333
HpyCH4III ACNGT 1 cut(s) 1114
HpyCH4IV ACGT 2 cut(s) 133, 364
HpyCH4V TGCA 6 cut(s) 74, 166, 170, 242, 362, 645
HpyF10VI GCNNNNNNNGC 5 cut(s) 533, 545, 566, 817, 899
HpyF3I CTNAG 4 cut(s) 528, 903, 1062, 1207
HpySE526I ACGT 2 cut(s) 133, 364
Hsp92II CATG 8 cut(s) 154, 170, 645, 676, 707, 1054, 1162, 1294
HspAI GCGC 2 cut(s) 560, 1156
Kzo9I GATC 6 cut(s) 113, 452, 503, 949, 1057, 1162
LguI GCTCTTC 1 cut(s) 1247
LmnI GCTCC 6 cut(s) 106, 850, 874, 1294, 1342, 1372
Lsp1109I GCAGC 3 cut(s) 523, 886, 942
LweI GCATC 4 cut(s) 83, 457, 1182, 1390
MaeI CTAG 4 cut(s) 30, 563, 602, 1196
MaeII ACGT 2 cut(s) 133, 364
MaeIII GTNAC 6 cut(s) 262, 322, 350, 616, 637, 1123
MalI GATC 6 cut(s) 115, 454, 505, 951, 1059, 1164
MboI GATC 6 cut(s) 113, 452, 503, 949, 1057, 1162
MboII GAAGA 9 cut(s) 106, 187, 399, 926, 1000, 1142, 1201, 1234, 1376
MfeI CAATTG 1 cut(s) 1303
MflI RGATCY 3 cut(s) 113, 503, 1162
MhlI GDGCHC 3 cut(s) 87, 855, 1299
MluCI AATT 5 cut(s) 477, 646, 695, 1257, 1303
MlyI GAGTC 1 cut(s) 268
MmeI TCCRAC 1 cut(s) 1377
MroXI GAANNNNTTC 1 cut(s) 783
MseI TTAA 5 cut(s) 293, 551, 1035, 1221, 1413
MspA1I CMGCKG 1 cut(s) 527
MspR9I CCNGG 2 cut(s) 728, 1370
MunI CAATTG 1 cut(s) 1303
Mva1269I GAATGC 1 cut(s) 37
MvaI CCWGG 2 cut(s) 728, 1370
MwoI GCNNNNNNNGC 5 cut(s) 533, 545, 566, 817, 899
NcoI CCATGG 1 cut(s) 150
NdeII GATC 6 cut(s) 113, 452, 503, 949, 1057, 1162
NlaIII CATG 8 cut(s) 154, 170, 645, 676, 707, 1054, 1162, 1294
NlaIV GGNNCC 8 cut(s) 312, 337, 568, 725, 852, 876, 921, 1374
NmuCI GTSAC 3 cut(s) 262, 637, 1123
NspI RCATGY 3 cut(s) 170, 645, 1054
NspV TTCGAA 1 cut(s) 590
PaeI GCATGC 1 cut(s) 170
PagI TCATGA 1 cut(s) 672
PciI ACATGT 1 cut(s) 1050
PciSI GCTCTTC 1 cut(s) 1247
PctI GAATGC 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 783
PfeI GAWTC 4 cut(s) 498, 779, 940, 1041
PkrI GCNGC 3 cut(s) 538, 901, 957
PleI GAGTC 1 cut(s) 268
PpsI GAGTC 1 cut(s) 268
PscI ACATGT 1 cut(s) 1050
PshAI GACNNNNGTC 1 cut(s) 728
Psp124BI GAGCTC 1 cut(s) 1299
Psp1406I AACGTT 1 cut(s) 133
Psp6I CCWGG 2 cut(s) 726, 1368
PspFI CCCAGC 1 cut(s) 816
PspGI CCWGG 2 cut(s) 726, 1368
PspN4I GGNNCC 8 cut(s) 312, 337, 568, 725, 852, 876, 921, 1374
PspPI GGNCC 3 cut(s) 335, 723, 1168
PstNI CAGNNNCTG 1 cut(s) 899
PsuI RGATCY 3 cut(s) 113, 503, 1162
PvuII CAGCTG 1 cut(s) 527
RsaI GTAC 5 cut(s) 218, 515, 1055, 1091, 1097
RsaNI GTAC 5 cut(s) 217, 514, 1054, 1090, 1096
SacI GAGCTC 1 cut(s) 1299
SapI GCTCTTC 1 cut(s) 1247
SaqAI TTAA 5 cut(s) 293, 551, 1035, 1221, 1413
SatI GCNGC 3 cut(s) 537, 900, 956
Sau3AI GATC 6 cut(s) 113, 452, 503, 949, 1057, 1162
Sau96I GGNCC 3 cut(s) 335, 723, 1168
SchI GAGTC 1 cut(s) 268
ScrFI CCNGG 2 cut(s) 728, 1370
SduI GDGCHC 3 cut(s) 87, 855, 1299
SfaNI GCATC 4 cut(s) 83, 457, 1182, 1390
SfuI TTCGAA 1 cut(s) 590
SinI GGWCC 2 cut(s) 335, 723
SmlI CTYRAG 1 cut(s) 117
SmoI CTYRAG 1 cut(s) 117
SphI GCATGC 1 cut(s) 170
Sse9I AATT 5 cut(s) 477, 646, 695, 1257, 1303
SsiI CCGC 6 cut(s) 104, 141, 212, 801, 966, 1171
SspI AATATT 1 cut(s) 284
SspMI CTAG 4 cut(s) 30, 563, 602, 1196
SstI GAGCTC 1 cut(s) 1299
StyD4I CCNGG 2 cut(s) 726, 1368
StyI CCWWGG 3 cut(s) 150, 837, 843
TaaI ACNGT 1 cut(s) 1114
TaiI ACGT 2 cut(s) 136, 367
TaqI TCGA 2 cut(s) 432, 590
TasI AATT 5 cut(s) 477, 646, 695, 1257, 1303
TatI WGTACW 3 cut(s) 216, 1089, 1095
TfiI GAWTC 4 cut(s) 498, 779, 940, 1041
Tru1I TTAA 5 cut(s) 293, 551, 1035, 1221, 1413
Tru9I TTAA 5 cut(s) 293, 551, 1035, 1221, 1413
TscAI CASTG 2 cut(s) 226, 1134
TseFI GTSAC 3 cut(s) 262, 637, 1123
TseI GCWGC 3 cut(s) 536, 899, 955
Tsp45I GTSAC 3 cut(s) 262, 637, 1123
TspDTI ATGAA 2 cut(s) 1119, 1344
TspGWI ACGGA 3 cut(s) 106, 1010, 1235
TspRI CASTG 2 cut(s) 226, 1134
VpaK11BI GGWCC 2 cut(s) 335, 723
XapI RAATTY 2 cut(s) 695, 1257
XceI RCATGY 3 cut(s) 170, 645, 1054
XmnI GAANNNNTTC 1 cut(s) 783
XspI CTAG 4 cut(s) 30, 563, 602, 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.