pycom08g21180

Elongation factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
20733707 .. 20736680
2974 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g21180.5

Sequence Viewer

Length: 1437 bp
ATGTCGTTTTCACTCGGACTAAAAACCCTAGCACTTGGCTTTTCCTACATCGTCTCTTGCTCTCTTATTCGCATCACTCCACTTGTGCTGCTGCTCTCTCTCTCTCGCGGAAGAACGCTCCGCCTTACAGATCTTAAATCTGAGCGAAACGTTTTTCCGGAACAGCCATGGCTTTGGGGTTTTGTCTTGCATGCAGGGAAGACAAACAAAAATGGTTACAAGGCGCTCATTGTTGCCGAGTACAGTGGTGTGAAAGTTGAACTTGCACCCAACTTTGAGATGGGTGTTACAAACAAGACTCCTGAGTATTTGAAGTTAAACCCTATCGGAAAGGTTCCGCTGTTGGTAACACCTGATGGTCCCATCTTTGAGAGTAACGCTATTGCACGCTATGTCGCACGCTTGAAGGCTGACAATCCTCTGTGTGGTTCTTCTCTGATTGACTATGCCCATATCGAGCAATGGATTGATTTTGGATCCTTGGAGATTGATGCTAACATACTTAAGTGGTGGTTACCGAGAGTGGGACATCGCGTGTACCTTCCTCCAGATGAGGAAGCTACAATTTCTGCATTGAAGAGAGCACTAGGTGCCTTGAACACCCATCTTGCTTCCAACACATACCTAGTTGGGCATTCTGTAACCCTTGCTGACATTGTTGTTGGTTGCAATTTGTACTTTGGGTTCACCCAAATTTTGACTAAGAGCTTCACCTCAGAGTTTCCCCACGTTGAGAGATACTTCTGGACTCTGGTCAATCAACCAACCTTCAAAAAGGTAATGGGTGATGTCAAGCAGGCTGTTTCAGTTCCACCAGTTGTATCTGCAAAGAAGCCTGCCCAGCCTGCTAAAGGCAAGGCCAAGGAGGAGCCCAAGAAAGAAGCCAAAAAGGAGCCGGAAAAACTCAAGGCAGAAGCTGCCGAGGAAGTGGAAGAGGCTCCAAAGCCTAAACCCAAGAATCCTCTTGATCTGCTTCCCCCAAGTAAGATGGTATTGGACGACTGGAAGAGACTTTACTCTAACACAAAGACCAACTTCCGTGAGGTTGCTATTAAAGGATTCTGGGACATGTACGATCCCGAAGGATACTCTCTTTGGTTCTGTGAATACAAGTACAATGATGAGAATACAGTTTCCTTTGTGACACTGAACAAGGTCGGTGGATTCCTTCAGAGGATGGATTTGGCCCGCAAGTATGCTTTTGGAAAGATGCTTGTGATTGGCTCAGAGGCACCCTTCAAGGTGAAGGGGCTGTGGCTCTTCCGTGGGCAAGAAATTCCCAAATTTGTGATGGATGAGTGCTACGACATGGAGCTCTACAACTGGACAAAGGTTGACATTTCGGATGAAAACCAAAAGGAGCGTGTCAACCAGATGATCGAAGACCAGGAGCCGTTCGAGGGAGAGGCTCTTTTGGATGCCAAGTGCTTCAAGTGA

Protein Analysis

479

Amino Acids

54.21

Weight (kDa)

8.27

Isoelectric Point (pI)

32.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 590, 1231
AccII CGCG 2 cut(s) 108, 534
AccIII TCCGGA 1 cut(s) 157
AciI CCGC 4 cut(s) 108, 121, 338, 1189
AclI AACGTT 1 cut(s) 150
AclWI GGATC 3 cut(s) 471, 484, 1070
AcsI RAATTY 3 cut(s) 693, 1275, 1283
AcuI CTGAAG 1 cut(s) 1154
AdeI CACNNNGTG 1 cut(s) 590
AfaI GTAC 5 cut(s) 242, 539, 677, 1073, 1115
AfiI CCNNNNNNNGG 4 cut(s) 425, 524, 851, 1400
AflII CTTAAG 1 cut(s) 503
AflIII ACRYGT 1 cut(s) 1068
AgsI TTSAA 8 cut(s) 260, 313, 406, 577, 598, 772, 1240, 1432
AjnI CCWGG 1 cut(s) 1386
AluBI AGCT 4 cut(s) 560, 708, 917, 1315
AluI AGCT 4 cut(s) 560, 708, 917, 1315
Alw21I GWGCWC 2 cut(s) 586, 1317
Alw26I GTCTC 2 cut(s) 58, 1003
AlwI GGATC 3 cut(s) 471, 484, 1070
AlwNI CAGNNNCTG 1 cut(s) 917
Aor13HI TCCGGA 1 cut(s) 157
AoxI GGCC 2 cut(s) 858, 1185
ApeKI GCWGC 3 cut(s) 88, 91, 917
ApoI RAATTY 3 cut(s) 693, 1275, 1283
AspLEI GCGC 1 cut(s) 226
AspS9I GGNCC 2 cut(s) 359, 1186
AsuHPI GGTGA 4 cut(s) 679, 703, 797, 1255
AvaII GGWCC 1 cut(s) 359
BamHI GGATCC 1 cut(s) 476
BanI GGYRCC 2 cut(s) 590, 1231
BanII GRGCYC 2 cut(s) 873, 1317
BarI GAAGNNNNNNTAC 2 cut(s) 998, 1030
BbsI GAAGAC 2 cut(s) 206, 1389
Bbv12I GWGCWC 2 cut(s) 586, 1317
BbvI GCAGC 3 cut(s) 75, 78, 904
BccI CCATC 7 cut(s) 274, 350, 371, 612, 982, 1171, 1285
BceAI ACGGC 1 cut(s) 1378
BciT130I CCWGG 1 cut(s) 1388
BciVI GTATCC 1 cut(s) 1079
BcoDI GTCTC 2 cut(s) 58, 1003
BfaI CTAG 3 cut(s) 29, 587, 626
BfoI RGCGCY 1 cut(s) 227
BfrI CTTAAG 1 cut(s) 503
BfuI GTATCC 1 cut(s) 1079
BglII AGATCT 1 cut(s) 130
BisI GCNGC 3 cut(s) 89, 92, 918
BlsI GCNGC 3 cut(s) 90, 93, 919
Bme1390I CCNGG 1 cut(s) 1388
Bme18I GGWCC 1 cut(s) 359
BmgT120I GGNCC 2 cut(s) 359, 1186
BmiI GGNNCC 9 cut(s) 336, 361, 478, 592, 870, 894, 939, 1233, 1392
BmrFI CCNGG 1 cut(s) 1388
BmsI GCATC 4 cut(s) 81, 481, 1200, 1408
BoxI GACNNNNGTC 1 cut(s) 752
BpiI GAAGAC 2 cut(s) 206, 1389
BpmI CTGGAG 1 cut(s) 531
BpuEI CTTGAG 1 cut(s) 890
BsaJI CCNNGG 5 cut(s) 167, 480, 861, 921, 1264
BsaWI WCCGGW 1 cut(s) 157
Bsc4I CCNNNNNNNGG 4 cut(s) 425, 524, 851, 1400
Bse1I ACTGG 3 cut(s) 815, 1007, 1328
Bse3DI GCAATG 1 cut(s) 467
BseAI TCCGGA 1 cut(s) 157
BseBI CCWGG 1 cut(s) 1388
BseDI CCNNGG 5 cut(s) 167, 480, 861, 921, 1264
BseGI GGATG 4 cut(s) 1182, 1300, 1351, 1423
BseLI CCNNNNNNNGG 4 cut(s) 425, 524, 851, 1400
BseMI GCAATG 1 cut(s) 467
BseMII CTCAG 4 cut(s) 132, 294, 729, 1239
BseNI ACTGG 3 cut(s) 815, 1007, 1328
BseRI GAGGAG 1 cut(s) 881
BseXI GCAGC 3 cut(s) 75, 78, 904
BseYI CCCAGC 1 cut(s) 840
Bsh1236I CGCG 2 cut(s) 108, 534
BshFI GGCC 2 cut(s) 860, 1187
BshNI GGYRCC 2 cut(s) 590, 1231
BsiHKAI GWGCWC 2 cut(s) 586, 1317
BsiSI CCGG 2 cut(s) 158, 896
BslFI GGGAC 3 cut(s) 345, 540, 1079
BslI CCNNNNNNNGG 4 cut(s) 425, 524, 851, 1400
BsmAI GTCTC 2 cut(s) 58, 1003
BsmBI CGTCTC 1 cut(s) 58
BsmFI GGGAC 3 cut(s) 345, 540, 1079
BsmI GAATGC 1 cut(s) 634
BsnI GGCC 2 cut(s) 860, 1187
Bsp1286I GDGCHC 3 cut(s) 586, 873, 1317
Bsp13I TCCGGA 1 cut(s) 157
Bsp143I GATC 5 cut(s) 130, 476, 967, 1075, 1377
Bsp19I CCATGG 1 cut(s) 167
BspACI CCGC 4 cut(s) 108, 121, 338, 1189
BspANI GGCC 2 cut(s) 860, 1187
BspCNI CTCAG 4 cut(s) 133, 295, 728, 1238
BspEI TCCGGA 1 cut(s) 157
BspFNI CGCG 2 cut(s) 108, 534
BspLI GGNNCC 9 cut(s) 336, 361, 478, 592, 870, 894, 939, 1233, 1392
BspPI GGATC 3 cut(s) 471, 484, 1070
BspQI GCTCTTC 1 cut(s) 1265
BspT107I GGYRCC 2 cut(s) 590, 1231
BspTI CTTAAG 1 cut(s) 503
BsrDI GCAATG 1 cut(s) 467
BsrI ACTGG 3 cut(s) 815, 1007, 1328
BssECI CCNNGG 5 cut(s) 167, 480, 861, 921, 1264
BssMI GATC 5 cut(s) 130, 476, 967, 1075, 1377
BssT1I CCWWGG 3 cut(s) 167, 480, 861
Bst2UI CCWGG 1 cut(s) 1388
Bst4CI ACNGT 2 cut(s) 245, 1132
Bst6I CTCTTC 4 cut(s) 572, 927, 1001, 1265
BstAFI CTTAAG 1 cut(s) 503
BstAPI GCANNNNNTGC 2 cut(s) 590, 917
BstC8I GCNNGC 7 cut(s) 192, 388, 400, 798, 837, 846, 1189
BstDEI CTNAG 5 cut(s) 141, 303, 702, 715, 1225
BstDSI CCRYGG 2 cut(s) 167, 1264
BstEII GGTNACC 1 cut(s) 513
BstENI CCTNNNNNAGG 1 cut(s) 849
BstF5I GGATG 4 cut(s) 1182, 1300, 1351, 1423
BstFNI CGCG 2 cut(s) 108, 534
BstH2I RGCGCY 1 cut(s) 227
BstHHI GCGC 1 cut(s) 226
BstKTI GATC 5 cut(s) 133, 479, 970, 1078, 1380
BstMAI GTCTC 2 cut(s) 58, 1003
BstMBI GATC 5 cut(s) 130, 476, 967, 1075, 1377
BstMWI GCNNNNNNNGC 4 cut(s) 590, 841, 845, 917
BstNI CCWGG 1 cut(s) 1388
BstNSI RCATGY 2 cut(s) 194, 1072
BstPAI GACNNNNGTC 1 cut(s) 752
BstPI GGTNACC 1 cut(s) 513
BstSCI CCNGG 1 cut(s) 1386
BstUI CGCG 2 cut(s) 108, 534
BstV1I GCAGC 3 cut(s) 75, 78, 904
BstV2I GAAGAC 2 cut(s) 206, 1389
BstX2I RGATCY 2 cut(s) 130, 476
BstXI CCANNNNNNTGG 1 cut(s) 174
BstYI RGATCY 2 cut(s) 130, 476
BsuI GTATCC 1 cut(s) 1079
BsuRI GGCC 2 cut(s) 860, 1187
BtgI CCRYGG 2 cut(s) 167, 1264
BtgZI GCGATG 1 cut(s) 515
BtsCI GGATG 4 cut(s) 1182, 1300, 1351, 1423
BtsIMutI CAGTG 2 cut(s) 250, 1145
Cac8I GCNNGC 7 cut(s) 192, 388, 400, 798, 837, 846, 1189
CaiI CAGNNNCTG 1 cut(s) 917
CfoI GCGC 1 cut(s) 226
Cfr13I GGNCC 2 cut(s) 359, 1186
Csp6I GTAC 5 cut(s) 241, 538, 676, 1072, 1114
CspCI CAANNNNNGTGG 2 cut(s) 1141, 1176
CviAII CATG 4 cut(s) 168, 191, 1069, 1309
CviQI GTAC 5 cut(s) 241, 538, 676, 1072, 1114
DdeI CTNAG 5 cut(s) 141, 303, 702, 715, 1225
DpnI GATC 5 cut(s) 132, 478, 969, 1077, 1379
DpnII GATC 5 cut(s) 130, 476, 967, 1075, 1377
DraIII CACNNNGTG 1 cut(s) 590
Eam1104I CTCTTC 4 cut(s) 572, 927, 1001, 1265
EarI CTCTTC 4 cut(s) 572, 927, 1001, 1265
EciI GGCGGA 1 cut(s) 110
Ecl136II GAGCTC 1 cut(s) 1315
Eco130I CCWWGG 3 cut(s) 167, 480, 861
Eco24I GRGCYC 2 cut(s) 873, 1317
Eco47I GGWCC 1 cut(s) 359
Eco53kI GAGCTC 1 cut(s) 1315
Eco57I CTGAAG 1 cut(s) 1154
Eco91I GGTNACC 1 cut(s) 513
EcoICRI GAGCTC 1 cut(s) 1315
EcoNI CCTNNNNNAGG 1 cut(s) 849
EcoO65I GGTNACC 1 cut(s) 513
EcoRII CCWGG 1 cut(s) 1386
EcoT14I CCWWGG 3 cut(s) 167, 480, 861
EcoT38I GRGCYC 2 cut(s) 873, 1317
ErhI CCWWGG 3 cut(s) 167, 480, 861
Esp3I CGTCTC 1 cut(s) 58
FaeI CATG 4 cut(s) 171, 194, 1072, 1312
FalI AAGNNNNNCTT 4 cut(s) 246, 278, 1019, 1051
FaqI GGGAC 3 cut(s) 345, 540, 1079
FatI CATG 4 cut(s) 167, 190, 1068, 1308
FauI CCCGC 1 cut(s) 1196
Fnu4HI GCNGC 3 cut(s) 89, 92, 918
FokI GGATG 4 cut(s) 1189, 1307, 1358, 1430
FriOI GRGCYC 2 cut(s) 873, 1317
Fsp4HI GCNGC 3 cut(s) 89, 92, 918
FspBI CTAG 3 cut(s) 29, 587, 626
GlaI GCGC 1 cut(s) 225
GluI GCNGC 3 cut(s) 89, 92, 918
GsaI CCCAGC 1 cut(s) 844
GsuI CTGGAG 1 cut(s) 531
HaeII RGCGCY 1 cut(s) 227
HaeIII GGCC 2 cut(s) 860, 1187
HapII CCGG 2 cut(s) 158, 896
HhaI GCGC 1 cut(s) 226
Hin1II CATG 4 cut(s) 171, 194, 1072, 1312
Hin6I GCGC 1 cut(s) 224
HinP1I GCGC 1 cut(s) 224
HincII GTYRAC 2 cut(s) 1336, 1369
HindII GTYRAC 2 cut(s) 1336, 1369
HinfI GANTC 5 cut(s) 298, 748, 958, 1059, 1164
HpaII CCGG 2 cut(s) 158, 896
HphI GGTGA 4 cut(s) 679, 703, 797, 1255
Hpy166II GTNNAC 4 cut(s) 538, 687, 1336, 1369
Hpy188I TCNGA 8 cut(s) 17, 142, 329, 438, 718, 1173, 1228, 1345
Hpy188III TCNNGA 6 cut(s) 158, 302, 548, 745, 965, 1079
Hpy8I GTNNAC 4 cut(s) 538, 687, 1336, 1369
HpyAV CCTTC 7 cut(s) 400, 551, 778, 1076, 1178, 1240, 1246
HpyCH4III ACNGT 2 cut(s) 245, 1132
HpyCH4IV ACGT 2 cut(s) 150, 729
HpyCH4V TGCA 7 cut(s) 190, 194, 266, 386, 572, 669, 827
HpyF10VI GCNNNNNNNGC 4 cut(s) 590, 841, 845, 917
HpyF3I CTNAG 5 cut(s) 141, 303, 702, 715, 1225
HpySE526I ACGT 2 cut(s) 150, 729
Hsp92II CATG 4 cut(s) 171, 194, 1072, 1312
HspAI GCGC 1 cut(s) 224
Kpn2I TCCGGA 1 cut(s) 157
Kzo9I GATC 5 cut(s) 130, 476, 967, 1075, 1377
LguI GCTCTTC 1 cut(s) 1265
LmnI GCTCC 7 cut(s) 123, 868, 892, 943, 1312, 1360, 1390
Lsp1109I GCAGC 3 cut(s) 75, 78, 904
LweI GCATC 4 cut(s) 81, 481, 1200, 1408
MaeI CTAG 3 cut(s) 29, 587, 626
MaeII ACGT 2 cut(s) 150, 729
MaeIII GTNAC 7 cut(s) 215, 286, 346, 374, 513, 640, 1141
MalI GATC 5 cut(s) 132, 478, 969, 1077, 1379
MboI GATC 5 cut(s) 130, 476, 967, 1075, 1377
MboII GAAGA 8 cut(s) 123, 211, 423, 589, 944, 1018, 1252, 1394
MflI RGATCY 2 cut(s) 130, 476
MhlI GDGCHC 3 cut(s) 586, 873, 1317
MluCI AATT 5 cut(s) 564, 670, 693, 1275, 1283
MlyI GAGTC 2 cut(s) 292, 742
MmeI TCCRAC 1 cut(s) 639
MroI TCCGGA 1 cut(s) 157
MseI TTAA 4 cut(s) 135, 317, 504, 1053
MspA1I CMGCKG 1 cut(s) 340
MspCI CTTAAG 1 cut(s) 503
MspI CCGG 2 cut(s) 158, 896
MspR9I CCNGG 1 cut(s) 1388
Mva1269I GAATGC 1 cut(s) 634
MvaI CCWGG 1 cut(s) 1388
MvnI CGCG 2 cut(s) 108, 534
MwoI GCNNNNNNNGC 4 cut(s) 590, 841, 845, 917
NcoI CCATGG 1 cut(s) 167
NdeII GATC 5 cut(s) 130, 476, 967, 1075, 1377
NlaIII CATG 4 cut(s) 171, 194, 1072, 1312
NlaIV GGNNCC 9 cut(s) 336, 361, 478, 592, 870, 894, 939, 1233, 1392
NmeAIII GCCGAG 2 cut(s) 262, 946
NmuCI GTSAC 1 cut(s) 1141
NspI RCATGY 2 cut(s) 194, 1072
PaeI GCATGC 1 cut(s) 194
PciI ACATGT 1 cut(s) 1068
PciSI GCTCTTC 1 cut(s) 1265
PctI GAATGC 1 cut(s) 634
PfeI GAWTC 3 cut(s) 958, 1059, 1164
PkrI GCNGC 3 cut(s) 90, 93, 919
PleI GAGTC 2 cut(s) 292, 742
PpsI GAGTC 2 cut(s) 292, 742
PscI ACATGT 1 cut(s) 1068
PshAI GACNNNNGTC 1 cut(s) 752
Psp124BI GAGCTC 1 cut(s) 1317
Psp1406I AACGTT 1 cut(s) 150
Psp6I CCWGG 1 cut(s) 1386
PspEI GGTNACC 1 cut(s) 513
PspFI CCCAGC 1 cut(s) 840
PspGI CCWGG 1 cut(s) 1386
PspN4I GGNNCC 9 cut(s) 336, 361, 478, 592, 870, 894, 939, 1233, 1392
PspPI GGNCC 2 cut(s) 359, 1186
PsrI GAACNNNNNNTAC 2 cut(s) 668, 700
PstNI CAGNNNCTG 1 cut(s) 917
PsuI RGATCY 2 cut(s) 130, 476
RsaI GTAC 5 cut(s) 242, 539, 677, 1073, 1115
RsaNI GTAC 5 cut(s) 241, 538, 676, 1072, 1114
SacI GAGCTC 1 cut(s) 1317
SapI GCTCTTC 1 cut(s) 1265
SaqAI TTAA 4 cut(s) 135, 317, 504, 1053
SatI GCNGC 3 cut(s) 89, 92, 918
Sau3AI GATC 5 cut(s) 130, 476, 967, 1075, 1377
Sau96I GGNCC 2 cut(s) 359, 1186
SchI GAGTC 2 cut(s) 292, 742
ScrFI CCNGG 1 cut(s) 1388
SduI GDGCHC 3 cut(s) 586, 873, 1317
SfaNI GCATC 4 cut(s) 81, 481, 1200, 1408
SinI GGWCC 1 cut(s) 359
SmlI CTYRAG 2 cut(s) 503, 905
SmoI CTYRAG 2 cut(s) 503, 905
SphI GCATGC 1 cut(s) 194
Sse9I AATT 5 cut(s) 564, 670, 693, 1275, 1283
SsiI CCGC 4 cut(s) 108, 121, 338, 1189
SspMI CTAG 3 cut(s) 29, 587, 626
SstI GAGCTC 1 cut(s) 1317
StyD4I CCNGG 1 cut(s) 1386
StyI CCWWGG 3 cut(s) 167, 480, 861
TaaI ACNGT 2 cut(s) 245, 1132
TaiI ACGT 2 cut(s) 153, 732
TaqI TCGA 3 cut(s) 456, 1380, 1398
TasI AATT 5 cut(s) 564, 670, 693, 1275, 1283
TatI WGTACW 3 cut(s) 240, 675, 1113
TfiI GAWTC 3 cut(s) 958, 1059, 1164
Tru1I TTAA 4 cut(s) 135, 317, 504, 1053
Tru9I TTAA 4 cut(s) 135, 317, 504, 1053
TscAI CASTG 2 cut(s) 250, 1152
TseFI GTSAC 1 cut(s) 1141
TseI GCWGC 3 cut(s) 88, 91, 917
Tsp45I GTSAC 1 cut(s) 1141
TspDTI ATGAA 1 cut(s) 1362
TspGWI ACGGA 2 cut(s) 1028, 1253
TspRI CASTG 2 cut(s) 250, 1152
Vha464I CTTAAG 1 cut(s) 503
VpaK11BI GGWCC 1 cut(s) 359
XagI CCTNNNNNAGG 1 cut(s) 849
XapI RAATTY 3 cut(s) 693, 1275, 1283
XceI RCATGY 2 cut(s) 194, 1072
XcmI CCANNNNNNNNNTGG 2 cut(s) 277, 1288
XspI CTAG 3 cut(s) 29, 587, 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.