Prupe.2G010400_v2.0.a1

Zinc finger A20 and AN1 domain-containing stress-associated protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
948039 .. 952335
4297 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G010400.1

Sequence Viewer

Length: 519 bp
ATGGAGCACAACGAGACAGGGTGTCAAGCTCCTCCTGAAGCTCCCAAGCTCTGTGCCAACAACTGCGGATTCTTTGGAAGTGCAGCAACAATGAATTTGTGTTCCAAATGCCACAAGGACTTGATATTGAAGCAAGAACAGGCTAAAGTTGCTGCAGCATCCATTGATTGTGCTGTGAATGGCAATCCCAATGACAGAGGGAAGGAGCCTATTGCTACTGTTGATGTAGATGTACAAGCTGGGTCCGCAGATTTGATGCTCATCTCAACACAGGCTTCCTCTACTCCATCTTTGGACATTAAGAGTGAGGAGAAGGTGAAAGAGACTCCAAACAGGTGCGGAACTTGTAAGAAACGTGTTGGTCTAACCGGCTTCAATTGCCGTTGTGGAAATCTCTTTTGTTCACTCCATCGTTACTCGGATAAACACAACTGCCCCTATGATTACCGAAGTGCTGCTCAGGATGCTATAGCAAAAGCCAACCCGGTTGTGAAGGCAGAAAAGCTGGACAAAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

173

Amino Acids

18.48

Weight (kDa)

7.95

Isoelectric Point (pI)

24.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 66, 246, 339
AcsI RAATTY 1 cut(s) 94
AcuI CTGAAG 1 cut(s) 57
AfaI GTAC 1 cut(s) 234
AflIII ACRYGT 1 cut(s) 355
AgsI TTSAA 2 cut(s) 130, 376
AhdI GACNNNNNGTC 1 cut(s) 21
AluBI AGCT 5 cut(s) 29, 41, 49, 239, 505
AluI AGCT 5 cut(s) 29, 41, 49, 239, 505
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 2 cut(s) 8, 317
ApeKI GCWGC 4 cut(s) 83, 152, 155, 455
ApoI RAATTY 1 cut(s) 94
AspS9I GGNCC 1 cut(s) 243
AsuC2I CCSGG 1 cut(s) 485
AsuHPI GGTGA 1 cut(s) 328
AvaII GGWCC 1 cut(s) 243
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 4 cut(s) 95, 139, 167, 442
BccI CCATC 2 cut(s) 295, 417
BceAI ACGGC 1 cut(s) 366
BcnI CCSGG 1 cut(s) 485
BcoDI GTCTC 2 cut(s) 8, 317
BfmI CTRYAG 2 cut(s) 153, 468
BisI GCNGC 4 cut(s) 84, 153, 156, 456
BlsI GCNGC 4 cut(s) 85, 154, 157, 457
Bme1390I CCNGG 1 cut(s) 485
Bme18I GGWCC 1 cut(s) 243
BmeRI GACNNNNNGTC 1 cut(s) 21
BmgT120I GGNCC 1 cut(s) 243
BmiI GGNNCC 2 cut(s) 207, 244
BmrFI CCNGG 1 cut(s) 485
BmsI GCATC 3 cut(s) 167, 246, 454
Bpu10I CCTNAGC 1 cut(s) 459
BpuMI CCSGG 1 cut(s) 485
BsaBI GATNNNNATC 1 cut(s) 260
Bse118I RCCGGY 1 cut(s) 368
Bse8I GATNNNNATC 1 cut(s) 260
BseGI GGATG 2 cut(s) 158, 469
BseJI GATNNNNATC 1 cut(s) 260
BseMII CTCAG 1 cut(s) 473
BseRI GAGGAG 2 cut(s) 21, 323
BseXI GCAGC 4 cut(s) 95, 139, 167, 442
BseYI CCCAGC 1 cut(s) 239
BsgI GTGCAG 1 cut(s) 102
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 2 cut(s) 369, 485
BsmAI GTCTC 2 cut(s) 8, 317
Bsp1286I GDGCHC 1 cut(s) 9
Bsp1407I TGTACA 1 cut(s) 232
BspACI CCGC 3 cut(s) 66, 246, 339
BspCNI CTCAG 1 cut(s) 472
BspLI GGNNCC 2 cut(s) 207, 244
BspMAI CTGCAG 1 cut(s) 157
BsrFI RCCGGY 1 cut(s) 368
BsrGI TGTACA 1 cut(s) 232
BssAI RCCGGY 1 cut(s) 368
Bst4CI ACNGT 1 cut(s) 220
BstAUI TGTACA 1 cut(s) 232
BstDEI CTNAG 1 cut(s) 459
BstF5I GGATG 2 cut(s) 158, 469
BstMAI GTCTC 2 cut(s) 8, 317
BstMWI GCNNNNNNNGC 4 cut(s) 149, 245, 378, 464
BstSCI CCNGG 1 cut(s) 483
BstSFI CTRYAG 2 cut(s) 153, 468
BstV1I GCAGC 4 cut(s) 95, 139, 167, 442
BtsCI GGATG 2 cut(s) 158, 469
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 1 cut(s) 243
Csp6I GTAC 1 cut(s) 233
CviQI GTAC 1 cut(s) 233
DdeI CTNAG 1 cut(s) 459
DriI GACNNNNNGTC 1 cut(s) 21
Eam1105I GACNNNNNGTC 1 cut(s) 21
Eco47I GGWCC 1 cut(s) 243
Eco57I CTGAAG 1 cut(s) 57
FaiI YATR 2 cut(s) 441, 470
Fnu4HI GCNGC 4 cut(s) 84, 153, 156, 456
FokI GGATG 2 cut(s) 145, 476
Fsp4HI GCNGC 4 cut(s) 84, 153, 156, 456
GluI GCNGC 4 cut(s) 84, 153, 156, 456
GsaI CCCAGC 1 cut(s) 243
HapII CCGG 2 cut(s) 369, 485
HinfI GANTC 2 cut(s) 69, 325
HpaII CCGG 2 cut(s) 369, 485
HphI GGTGA 1 cut(s) 328
Hpy166II GTNNAC 1 cut(s) 404
Hpy188I TCNGA 2 cut(s) 421, 518
Hpy188III TCNNGA 2 cut(s) 35, 461
Hpy8I GTNNAC 1 cut(s) 404
HpyAV CCTTC 3 cut(s) 196, 307, 487
HpyCH4III ACNGT 1 cut(s) 220
HpyCH4IV ACGT 1 cut(s) 355
HpyCH4V TGCA 2 cut(s) 83, 155
HpyF10VI GCNNNNNNNGC 4 cut(s) 149, 245, 378, 464
HpyF3I CTNAG 1 cut(s) 459
HpySE526I ACGT 1 cut(s) 355
LmnI GCTCC 4 cut(s) 4, 34, 46, 205
Lsp1109I GCAGC 4 cut(s) 95, 139, 167, 442
LweI GCATC 3 cut(s) 167, 246, 454
MaeII ACGT 1 cut(s) 355
MaeIII GTNAC 1 cut(s) 413
MfeI CAATTG 1 cut(s) 376
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 2 cut(s) 94, 376
MlyI GAGTC 1 cut(s) 319
MnlI CCTC 4 cut(s) 42, 191, 289, 301
MseI TTAA 1 cut(s) 300
MspI CCGG 2 cut(s) 369, 485
MspR9I CCNGG 1 cut(s) 485
MunI CAATTG 1 cut(s) 376
MwoI GCNNNNNNNGC 4 cut(s) 149, 245, 378, 464
NciI CCSGG 1 cut(s) 485
NlaIV GGNNCC 2 cut(s) 207, 244
PfeI GAWTC 1 cut(s) 69
PkrI GCNGC 4 cut(s) 85, 154, 157, 457
PleI GAGTC 1 cut(s) 319
PpsI GAGTC 1 cut(s) 319
PspFI CCCAGC 1 cut(s) 239
PspN4I GGNNCC 2 cut(s) 207, 244
PspPI GGNCC 1 cut(s) 243
PstI CTGCAG 1 cut(s) 157
RsaI GTAC 1 cut(s) 234
RsaNI GTAC 1 cut(s) 233
SaqAI TTAA 1 cut(s) 300
SatI GCNGC 4 cut(s) 84, 153, 156, 456
Sau96I GGNCC 1 cut(s) 243
SchI GAGTC 1 cut(s) 319
ScrFI CCNGG 1 cut(s) 485
SduI GDGCHC 1 cut(s) 9
SetI ASST 8 cut(s) 31, 43, 51, 241, 318, 338, 358, 507
SfaNI GCATC 3 cut(s) 167, 246, 454
SfcI CTRYAG 2 cut(s) 153, 468
SinI GGWCC 1 cut(s) 243
Sse9I AATT 2 cut(s) 94, 376
SsiI CCGC 3 cut(s) 66, 246, 339
StyD4I CCNGG 1 cut(s) 483
TaaI ACNGT 1 cut(s) 220
TaiI ACGT 1 cut(s) 358
TasI AATT 2 cut(s) 94, 376
TatI WGTACW 1 cut(s) 232
TfiI GAWTC 1 cut(s) 69
Tru1I TTAA 1 cut(s) 300
Tru9I TTAA 1 cut(s) 300
TseI GCWGC 4 cut(s) 83, 152, 155, 455
TspDTI ATGAA 1 cut(s) 107
VpaK11BI GGWCC 1 cut(s) 243
XapI RAATTY 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.