Prupe.7G068900_v2.0.a1

Zinc finger A20 and AN1 domain-containing stress-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000730
Physical Location & Seq
Forward (+)
10702967 .. 10706929
3963 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G068900.1

Sequence Viewer

Length: 519 bp
ATGGAATCTCACGATGAAACTGGATGCCAAACTCCAGACCGCCCTATCCTTTGCATTAACAACTGTGGATTCTTTGGAAGGGCCGCTACAATGAACATGTGTTCTAAATGTTACAAGGACACACTCCTAAAGCAGGAGCAAGCCAATTTTGCTGCTTCATCCATTGACAGCATTGTGAATGGCAGCAGTAGCAGCATTGGCATTGGCCCAGTCGTTGCAGGTGTTGTTGATGTGCAAGCTGGACAAGTGGAGACAAGAGTTGTTTCAACAGAACCATCCATTGACTCATCTTCGAGCATGGTGTTTGAGGTGAAAGAAAAAGAGGGACCAAGCAGATGCACTACTTGCCGAAAGCGTGTTGGTTTAACTGGCTTCAATTGCAAATGTGGAAACACCTTCTGTGCAAGTCATCGTTATTCTGACAAACATGACTGTCCTTTTGATTATAGGACTGCTGGTCAAGATGCTATTGCAAAAGCCAATCCTGTCGTCAAGGCAGAGAAACTTGATAAGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-A20 zf-AN1

Protein Analysis

173

Amino Acids

18.5

Weight (kDa)

6.79

Isoelectric Point (pI)

29.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 209
Acc36I ACCTGC 1 cut(s) 209
AciI CCGC 2 cut(s) 40, 84
AfiI CCNNNNNNNGG 1 cut(s) 133
AflIII ACRYGT 1 cut(s) 96
AgsI TTSAA 2 cut(s) 267, 376
AhdI GACNNNNNGTC 1 cut(s) 456
AluBI AGCT 1 cut(s) 239
AluI AGCT 1 cut(s) 239
Alw26I GTCTC 1 cut(s) 245
AoxI GGCC 2 cut(s) 81, 205
ApeKI GCWGC 3 cut(s) 152, 183, 192
ArsI GACNNNNNNTTYG 2 cut(s) 422, 454
AspS9I GGNCC 3 cut(s) 81, 206, 326
AsuHPI GGTGA 1 cut(s) 322
AvaII GGWCC 1 cut(s) 326
BarI GAAGNNNNNNTAC 2 cut(s) 70, 102
BbvI GCAGC 3 cut(s) 139, 195, 204
BccI CCATC 1 cut(s) 283
BcoDI GTCTC 1 cut(s) 245
BfaI CTAG 1 cut(s) 517
BfuAI ACCTGC 1 cut(s) 209
BglII AGATCT 1 cut(s) 513
BisI GCNGC 4 cut(s) 84, 153, 184, 193
BlsI GCNGC 4 cut(s) 85, 154, 185, 194
Bme18I GGWCC 1 cut(s) 326
BmeRI GACNNNNNGTC 1 cut(s) 456
BmgT120I GGNCC 3 cut(s) 81, 206, 326
BmiI GGNNCC 1 cut(s) 327
BmrI ACTGGG 1 cut(s) 203
BmsI GCATC 3 cut(s) 14, 326, 454
BmuI ACTGGG 1 cut(s) 203
BpmI CTGGAG 1 cut(s) 18
Bsc4I CCNNNNNNNGG 1 cut(s) 133
Bse1I ACTGG 3 cut(s) 25, 209, 373
BseGI GGATG 3 cut(s) 29, 158, 275
BseLI CCNNNNNNNGG 1 cut(s) 133
BseNI ACTGG 3 cut(s) 25, 209, 373
BseXI GCAGC 3 cut(s) 139, 195, 204
BshFI GGCC 2 cut(s) 83, 207
BslFI GGGAC 1 cut(s) 339
BslI CCNNNNNNNGG 1 cut(s) 133
BsmAI GTCTC 1 cut(s) 245
BsmFI GGGAC 1 cut(s) 339
BsnI GGCC 2 cut(s) 83, 207
Bsp143I GATC 1 cut(s) 513
BspACI CCGC 2 cut(s) 40, 84
BspANI GGCC 2 cut(s) 83, 207
BspLI GGNNCC 1 cut(s) 327
BspMI ACCTGC 1 cut(s) 209
BsrI ACTGG 3 cut(s) 25, 209, 373
BssMI GATC 1 cut(s) 513
Bst4CI ACNGT 2 cut(s) 65, 434
BstAPI GCANNNNNTGC 1 cut(s) 345
BstC8I GCNNGC 2 cut(s) 141, 237
BstENI CCTNNNNNAGG 1 cut(s) 131
BstF5I GGATG 3 cut(s) 29, 158, 275
BstKTI GATC 1 cut(s) 516
BstMAI GTCTC 1 cut(s) 245
BstMBI GATC 1 cut(s) 513
BstMWI GCNNNNNNNGC 6 cut(s) 149, 189, 192, 198, 345, 378
BstNSI RCATGY 1 cut(s) 100
BstV1I GCAGC 3 cut(s) 139, 195, 204
BstX2I RGATCY 1 cut(s) 513
BstYI RGATCY 1 cut(s) 513
BsuRI GGCC 2 cut(s) 83, 207
BtsCI GGATG 3 cut(s) 29, 158, 275
BveI ACCTGC 1 cut(s) 209
Cac8I GCNNGC 2 cut(s) 141, 237
Cfr13I GGNCC 3 cut(s) 81, 206, 326
CviAII CATG 3 cut(s) 97, 298, 428
CviJI RGCY 6 cut(s) 83, 143, 207, 239, 372, 479
CviKI_1 RGCY 6 cut(s) 83, 143, 207, 239, 372, 479
DpnI GATC 1 cut(s) 515
DpnII GATC 1 cut(s) 513
DriI GACNNNNNGTC 1 cut(s) 456
Eam1105I GACNNNNNGTC 1 cut(s) 456
Eco47I GGWCC 1 cut(s) 326
EcoNI CCTNNNNNAGG 1 cut(s) 131
FaeI CATG 3 cut(s) 100, 301, 431
FaiI YATR 4 cut(s) 98, 299, 429, 447
FaqI GGGAC 1 cut(s) 339
FatI CATG 3 cut(s) 96, 297, 427
Fnu4HI GCNGC 4 cut(s) 84, 153, 184, 193
FokI GGATG 3 cut(s) 36, 145, 262
Fsp4HI GCNGC 4 cut(s) 84, 153, 184, 193
FspBI CTAG 1 cut(s) 517
GluI GCNGC 4 cut(s) 84, 153, 184, 193
GsuI CTGGAG 1 cut(s) 18
HaeIII GGCC 2 cut(s) 83, 207
Hin1II CATG 3 cut(s) 100, 301, 431
HinfI GANTC 3 cut(s) 5, 69, 284
HphI GGTGA 1 cut(s) 322
Hpy188I TCNGA 1 cut(s) 421
Hpy188III TCNNGA 3 cut(s) 11, 35, 461
HpyAV CCTTC 2 cut(s) 72, 406
HpyCH4III ACNGT 2 cut(s) 65, 434
HpyCH4V TGCA 7 cut(s) 54, 218, 235, 339, 381, 404, 473
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 189, 192, 198, 345, 378
Hsp92II CATG 3 cut(s) 100, 301, 431
Kzo9I GATC 1 cut(s) 513
LmnI GCTCC 1 cut(s) 136
LpnPI CCDG 9 cut(s) 6, 48, 119, 204, 222, 225, 354, 441, 498
Lsp1109I GCAGC 3 cut(s) 139, 195, 204
LweI GCATC 3 cut(s) 14, 326, 454
MaeI CTAG 1 cut(s) 517
MaeIII GTNAC 1 cut(s) 110
MalI GATC 1 cut(s) 515
MboI GATC 1 cut(s) 513
MboII GAAGA 1 cut(s) 282
MfeI CAATTG 1 cut(s) 376
MflI RGATCY 1 cut(s) 513
MluCI AATT 2 cut(s) 145, 376
MlyI GAGTC 1 cut(s) 278
MnlI CCTC 2 cut(s) 301, 316
MseI TTAA 2 cut(s) 57, 365
MunI CAATTG 1 cut(s) 376
MwoI GCNNNNNNNGC 6 cut(s) 149, 189, 192, 198, 345, 378
NdeII GATC 1 cut(s) 513
NlaIII CATG 3 cut(s) 100, 301, 431
NlaIV GGNNCC 1 cut(s) 327
NspI RCATGY 1 cut(s) 100
PaqCI CACCTGC 1 cut(s) 209
PciI ACATGT 1 cut(s) 96
PfeI GAWTC 2 cut(s) 5, 69
PkrI GCNGC 4 cut(s) 85, 154, 185, 194
PleI GAGTC 1 cut(s) 278
PpsI GAGTC 1 cut(s) 278
PscI ACATGT 1 cut(s) 96
PspN4I GGNNCC 1 cut(s) 327
PspPI GGNCC 3 cut(s) 81, 206, 326
PsuI RGATCY 1 cut(s) 513
SaqAI TTAA 2 cut(s) 57, 365
SatI GCNGC 4 cut(s) 84, 153, 184, 193
Sau3AI GATC 1 cut(s) 513
Sau96I GGNCC 3 cut(s) 81, 206, 326
SchI GAGTC 1 cut(s) 278
SetI ASST 4 cut(s) 223, 241, 312, 398
SfaNI GCATC 3 cut(s) 14, 326, 454
SinI GGWCC 1 cut(s) 326
Sse9I AATT 2 cut(s) 145, 376
SsiI CCGC 2 cut(s) 40, 84
SspMI CTAG 1 cut(s) 517
TaaI ACNGT 2 cut(s) 65, 434
TaqI TCGA 1 cut(s) 293
TasI AATT 2 cut(s) 145, 376
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 2 cut(s) 5, 69
Tru1I TTAA 2 cut(s) 57, 365
Tru9I TTAA 2 cut(s) 57, 365
TseI GCWGC 3 cut(s) 152, 183, 192
TspDTI ATGAA 3 cut(s) 30, 107, 147
VpaK11BI GGWCC 1 cut(s) 326
XagI CCTNNNNNAGG 1 cut(s) 131
XceI RCATGY 1 cut(s) 100
XspI CTAG 1 cut(s) 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.