Prupe.6G023300_v2.0.a1

Zinc finger A20 and AN1 domain-containing stress-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000730
Physical Location & Seq
Reverse (-)
1882390 .. 1885052
2663 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G023300.2

Sequence Viewer

Length: 522 bp
ATGGAGCATGAGGAGACTGGCTGTCAACCTCACCCCGAGGGTCCTATATTGTGTGTAAACAATTGTGGGTTTTTTGGAAGTGTGGCTACTAGGAATATGTGTTCCAAGTGCCATAAGGACATGATGTTGAAAGAGGAGCAGGCAAAGCTCGCTGCATCATCCTTTGGAAACATTGTCAATGGAACATCAAACAGCAATGGAAATGAACCTGTTGTTGCTGCTGGTGTGGATGTTCAAGCCCATCTGGTGGAGCCAAAAACTCTCTCTTTACAACCATCCTTTTCCTTTGGTTCAGGTTCGGGGGGGAGTGGTGAGGCAAAGCCAGAAGGCCCAAAACGTTGCGGAACTTGCAACAAGAGGGTTGGATTAACAGGGTTCAATTGTCGGTGTGGTCACCTTTTCTGTGCAGTACATCGTTATTCAGACAAACATGACTGCCCTTATGATTACCACACTGCTGCACGTGATGTGATTGCTAAAGCCAACCCTGTTGTAAAGGCTGATAAGCTTGAAAAAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-A20 zf-AN1

Protein Analysis

174

Amino Acids

18.48

Weight (kDa)

7.55

Isoelectric Point (pI)

29.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 247
AciI CCGC 1 cut(s) 342
AclI AACGTT 1 cut(s) 337
AcvI CACGTG 1 cut(s) 464
AfaI GTAC 1 cut(s) 411
AfiI CCNNNNNNNGG 1 cut(s) 247
AgsI TTSAA 4 cut(s) 130, 236, 379, 512
AhdI GACNNNNNGTC 1 cut(s) 21
AloI GAACNNNNNNTCC 2 cut(s) 85, 117
AluBI AGCT 2 cut(s) 148, 508
AluI AGCT 2 cut(s) 148, 508
Alw26I GTCTC 1 cut(s) 8
Ama87I CYCGRG 1 cut(s) 35
AoxI GGCC 1 cut(s) 328
ApeKI GCWGC 3 cut(s) 152, 218, 458
AspS9I GGNCC 2 cut(s) 41, 329
AsuHPI GGTGA 3 cut(s) 23, 323, 386
AvaI CYCGRG 1 cut(s) 35
AvaII GGWCC 1 cut(s) 41
BarI GAAGNNNNNNTAC 2 cut(s) 70, 102
BbrPI CACGTG 1 cut(s) 464
BbvI GCAGC 3 cut(s) 139, 205, 445
BccI CCATC 2 cut(s) 249, 283
BcoDI GTCTC 1 cut(s) 8
BfaI CTAG 1 cut(s) 90
BisI GCNGC 3 cut(s) 153, 219, 459
BlsI GCNGC 3 cut(s) 154, 220, 460
Bme18I GGWCC 1 cut(s) 41
BmeRI GACNNNNNGTC 1 cut(s) 21
BmeT110I CYCGRG 1 cut(s) 35
BmgT120I GGNCC 2 cut(s) 41, 329
BmiI GGNNCC 2 cut(s) 42, 252
BmsI GCATC 1 cut(s) 164
BsaAI YACGTR 1 cut(s) 464
BsaJI CCNNGG 1 cut(s) 36
Bsc4I CCNNNNNNNGG 1 cut(s) 247
Bse1I ACTGG 1 cut(s) 22
Bse3DI GCAATG 1 cut(s) 202
BseDI CCNNGG 1 cut(s) 36
BseGI GGATG 3 cut(s) 158, 235, 275
BseLI CCNNNNNNNGG 1 cut(s) 247
BseMI GCAATG 1 cut(s) 202
BseNI ACTGG 1 cut(s) 22
BseRI GAGGAG 2 cut(s) 26, 149
BseXI GCAGC 3 cut(s) 139, 205, 445
BsgI GTGCAG 2 cut(s) 426, 444
BshFI GGCC 1 cut(s) 330
BsiHKCI CYCGRG 1 cut(s) 35
BslI CCNNNNNNNGG 1 cut(s) 247
BsmAI GTCTC 1 cut(s) 8
BsnI GGCC 1 cut(s) 330
BsoBI CYCGRG 1 cut(s) 35
BspACI CCGC 1 cut(s) 342
BspANI GGCC 1 cut(s) 330
BspLI GGNNCC 2 cut(s) 42, 252
BsrDI GCAATG 1 cut(s) 202
BsrI ACTGG 1 cut(s) 22
BssECI CCNNGG 1 cut(s) 36
BstBAI YACGTR 1 cut(s) 464
BstC8I GCNNGC 2 cut(s) 141, 150
BstEII GGTNACC 1 cut(s) 392
BstF5I GGATG 3 cut(s) 158, 235, 275
BstMAI GTCTC 1 cut(s) 8
BstMWI GCNNNNNNNGC 3 cut(s) 145, 149, 348
BstPI GGTNACC 1 cut(s) 392
BstV1I GCAGC 3 cut(s) 139, 205, 445
BsuRI GGCC 1 cut(s) 330
BtsCI GGATG 3 cut(s) 158, 235, 275
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 1 cut(s) 453
Cac8I GCNNGC 2 cut(s) 141, 150
Cfr13I GGNCC 2 cut(s) 41, 329
Csp6I GTAC 1 cut(s) 410
CviAII CATG 3 cut(s) 8, 121, 431
CviQI GTAC 1 cut(s) 410
DriI GACNNNNNGTC 1 cut(s) 21
Eam1105I GACNNNNNGTC 1 cut(s) 21
Eco47I GGWCC 1 cut(s) 41
Eco72I CACGTG 1 cut(s) 464
Eco88I CYCGRG 1 cut(s) 35
Eco91I GGTNACC 1 cut(s) 392
EcoO109I RGGNCCY 1 cut(s) 41
EcoO65I GGTNACC 1 cut(s) 392
FaeI CATG 3 cut(s) 11, 124, 434
FaiI YATR 7 cut(s) 9, 47, 98, 114, 122, 432, 444
FatI CATG 3 cut(s) 7, 120, 430
Fnu4HI GCNGC 3 cut(s) 153, 219, 459
FokI GGATG 3 cut(s) 145, 242, 262
Fsp4HI GCNGC 3 cut(s) 153, 219, 459
FspBI CTAG 1 cut(s) 90
GluI GCNGC 3 cut(s) 153, 219, 459
HaeIII GGCC 1 cut(s) 330
Hin1II CATG 3 cut(s) 11, 124, 434
HincII GTYRAC 1 cut(s) 26
HindII GTYRAC 1 cut(s) 26
HindIII AAGCTT 1 cut(s) 506
HphI GGTGA 3 cut(s) 23, 323, 386
Hpy166II GTNNAC 2 cut(s) 26, 58
Hpy188I TCNGA 1 cut(s) 424
Hpy8I GTNNAC 2 cut(s) 26, 58
HpyAV CCTTC 1 cut(s) 320
HpyCH4IV ACGT 2 cut(s) 337, 463
HpyCH4V TGCA 4 cut(s) 155, 351, 407, 461
HpyF10VI GCNNNNNNNGC 3 cut(s) 145, 149, 348
HpySE526I ACGT 2 cut(s) 337, 463
Hsp92II CATG 3 cut(s) 11, 124, 434
LmnI GCTCC 3 cut(s) 4, 136, 250
LpnPI CCDG 9 cut(s) 3, 125, 207, 222, 230, 279, 336, 357, 501
Lsp1109I GCAGC 3 cut(s) 139, 205, 445
LweI GCATC 1 cut(s) 164
MaeI CTAG 1 cut(s) 90
MaeII ACGT 2 cut(s) 337, 463
MaeIII GTNAC 1 cut(s) 392
MfeI CAATTG 2 cut(s) 61, 379
MluCI AATT 2 cut(s) 61, 379
MmeI TCCRAC 1 cut(s) 343
MnlI CCTC 6 cut(s) 4, 31, 39, 127, 307, 351
MseI TTAA 1 cut(s) 368
MunI CAATTG 2 cut(s) 61, 379
MwoI GCNNNNNNNGC 3 cut(s) 145, 149, 348
NlaIII CATG 3 cut(s) 11, 124, 434
NlaIV GGNNCC 2 cut(s) 42, 252
NmuCI GTSAC 1 cut(s) 392
PflMI CCANNNNNTGG 1 cut(s) 247
PkrI GCNGC 3 cut(s) 154, 220, 460
PmaCI CACGTG 1 cut(s) 464
PmlI CACGTG 1 cut(s) 464
Ppu21I YACGTR 1 cut(s) 464
PpuMI RGGWCCY 1 cut(s) 41
Psp1406I AACGTT 1 cut(s) 337
Psp5II RGGWCCY 1 cut(s) 41
PspCI CACGTG 1 cut(s) 464
PspEI GGTNACC 1 cut(s) 392
PspN4I GGNNCC 2 cut(s) 42, 252
PspPI GGNCC 2 cut(s) 41, 329
PspPPI RGGWCCY 1 cut(s) 41
RsaI GTAC 1 cut(s) 411
RsaNI GTAC 1 cut(s) 410
SaqAI TTAA 1 cut(s) 368
SatI GCNGC 3 cut(s) 153, 219, 459
Sau96I GGNCC 2 cut(s) 41, 329
SetI ASST 8 cut(s) 31, 150, 211, 298, 340, 399, 466, 510
SfaNI GCATC 1 cut(s) 164
SinI GGWCC 1 cut(s) 41
Sse9I AATT 2 cut(s) 61, 379
SsiI CCGC 1 cut(s) 342
SspMI CTAG 1 cut(s) 90
TaiI ACGT 2 cut(s) 340, 466
TasI AATT 2 cut(s) 61, 379
TatI WGTACW 1 cut(s) 409
Tru1I TTAA 1 cut(s) 368
Tru9I TTAA 1 cut(s) 368
TscAI CASTG 1 cut(s) 460
TseFI GTSAC 1 cut(s) 392
TseI GCWGC 3 cut(s) 152, 218, 458
Tsp45I GTSAC 1 cut(s) 392
TspDTI ATGAA 1 cut(s) 219
TspRI CASTG 1 cut(s) 460
Van91I CCANNNNNTGG 1 cut(s) 247
VpaK11BI GGWCC 1 cut(s) 41
XspI CTAG 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.