pycom02g26370

Zinc finger A20 and AN1 domain-containing stress-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000730
Physical Location & Seq
Forward (+)
24177419 .. 24180257
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g26370.3

Sequence Viewer

Length: 624 bp
ATGGCTTCTGCTTCTCCTCGTCTGACACCTCTCTCTCCCTCTCTCCTGTTCGCTTTAGGGGGAGCGGATAGGAACCATCTCTGTGTGAACTGCAGGAGCTACTTTGAAGAGGTTGGTTCCTCTGCGAACAGGTCTGGAAATTCTAAGAAAATGGAGCACAATGAGACAGGATGCCAAGCTCCTCCTGAAGCTCCCAAGCTTTGTGCCAACAACTGTGGATTCTTTGGAAGTCCAGCAACCATGAATTTGTGTTCCAAGTGCCACAAGGACTTGGTGTTGAAGCAAGAACAAGCTAAAGTCGTTGCGGCATCCATTGATAGTGCGGTGAATGGCAGTCCCTCTGAAAGTGGGAAGGGGCCTGTTGCTGCTGCTGCTGTGGATGTACAAGCTGGCCCCGCAGATGTGATGCTTATCTCAACACAGGCATCCTCTACTCCATCTTTGAACATTAAGAGGGAGGAGAAGGTGAAAGAGACTCCTACCAGGTGCGGCACTTGCAGGAAACGTGTTGGTCTAACTGGGTTCAGTTGCCGATGTGGAGATCGATCTTTTGTGCAGTTCATCGGTACTCTGATAAACACAACTGCCCTTATGATTACCGGACTGCTGCTCAGGATGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-A20 zf-AN1

Protein Analysis

208

Amino Acids

21.8

Weight (kDa)

8.92

Isoelectric Point (pI)

46.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 65
AciI CCGC 5 cut(s) 65, 305, 323, 396, 489
AcsI RAATTY 2 cut(s) 139, 244
AcuI CTGAAG 1 cut(s) 207
AfaI GTAC 2 cut(s) 384, 568
AflIII ACRYGT 1 cut(s) 505
AgsI TTSAA 3 cut(s) 107, 280, 445
AjnI CCWGG 1 cut(s) 482
AluBI AGCT 6 cut(s) 99, 179, 191, 199, 293, 389
AluI AGCT 6 cut(s) 99, 179, 191, 199, 293, 389
Alw21I GWGCWC 1 cut(s) 159
Alw26I GTCTC 2 cut(s) 158, 467
AoxI GGCC 2 cut(s) 356, 391
ApeKI GCWGC 4 cut(s) 365, 368, 371, 607
ApoI RAATTY 2 cut(s) 139, 244
AspS9I GGNCC 2 cut(s) 356, 392
AsuHPI GGTGA 2 cut(s) 337, 478
Bbv12I GWGCWC 1 cut(s) 159
BbvI GCAGC 4 cut(s) 352, 355, 358, 594
BccI CCATC 2 cut(s) 84, 445
BciT130I CCWGG 1 cut(s) 484
BcoDI GTCTC 2 cut(s) 158, 467
BfmI CTRYAG 1 cut(s) 91
BisI GCNGC 6 cut(s) 306, 366, 369, 372, 490, 608
BlsI GCNGC 6 cut(s) 307, 367, 370, 373, 491, 609
Bme1390I CCNGG 1 cut(s) 484
BmgT120I GGNCC 2 cut(s) 356, 392
BmiI GGNNCC 4 cut(s) 74, 118, 357, 394
BmrFI CCNGG 1 cut(s) 484
BmrI ACTGGG 1 cut(s) 528
BmsI GCATC 5 cut(s) 161, 317, 396, 434, 606
BmuI ACTGGG 1 cut(s) 528
Bpu10I CCTNAGC 1 cut(s) 611
Bsa29I ATCGAT 1 cut(s) 544
BsaBI GATNNNNATC 1 cut(s) 410
BsaWI WCCGGW 1 cut(s) 599
Bse1I ACTGG 1 cut(s) 523
Bse8I GATNNNNATC 1 cut(s) 410
BseBI CCWGG 1 cut(s) 484
BseCI ATCGAT 1 cut(s) 544
BseGI GGATG 5 cut(s) 176, 308, 385, 425, 621
BseJI GATNNNNATC 1 cut(s) 410
BseNI ACTGG 1 cut(s) 523
BseRI GAGGAG 3 cut(s) 6, 171, 473
BseXI GCAGC 4 cut(s) 352, 355, 358, 594
BsgI GTGCAG 1 cut(s) 575
BshFI GGCC 2 cut(s) 358, 393
BshVI ATCGAT 1 cut(s) 544
BsiHKAI GWGCWC 1 cut(s) 159
BsiSI CCGG 1 cut(s) 600
BslFI GGGAC 1 cut(s) 321
BsmAI GTCTC 2 cut(s) 158, 467
BsmFI GGGAC 1 cut(s) 321
BsnI GGCC 2 cut(s) 358, 393
Bsp1286I GDGCHC 1 cut(s) 159
Bsp1407I TGTACA 1 cut(s) 382
Bsp143I GATC 2 cut(s) 541, 545
BspACI CCGC 5 cut(s) 65, 305, 323, 396, 489
BspANI GGCC 2 cut(s) 358, 393
BspCNI CTCAG 1 cut(s) 624
BspDI ATCGAT 1 cut(s) 544
BspLI GGNNCC 4 cut(s) 74, 118, 357, 394
BspMAI CTGCAG 1 cut(s) 95
BsrBI CCGCTC 1 cut(s) 65
BsrGI TGTACA 1 cut(s) 382
BsrI ACTGG 1 cut(s) 523
BssMI GATC 2 cut(s) 541, 545
Bst2UI CCWGG 1 cut(s) 484
Bst4CI ACNGT 1 cut(s) 215
Bst6I CTCTTC 1 cut(s) 102
BstAUI TGTACA 1 cut(s) 382
BstC8I GCNNGC 1 cut(s) 391
BstDEI CTNAG 2 cut(s) 144, 611
BstF5I GGATG 5 cut(s) 176, 308, 385, 425, 621
BstKTI GATC 2 cut(s) 544, 548
BstMAI GTCTC 2 cut(s) 158, 467
BstMBI GATC 2 cut(s) 541, 545
BstMWI GCNNNNNNNGC 4 cut(s) 371, 395, 495, 616
BstNI CCWGG 1 cut(s) 484
BstSCI CCNGG 1 cut(s) 482
BstSFI CTRYAG 1 cut(s) 91
BstV1I GCAGC 4 cut(s) 352, 355, 358, 594
Bsu15I ATCGAT 1 cut(s) 544
BsuRI GGCC 2 cut(s) 358, 393
BsuTUI ATCGAT 1 cut(s) 544
BtsCI GGATG 5 cut(s) 176, 308, 385, 425, 621
Cac8I GCNNGC 1 cut(s) 391
Cfr13I GGNCC 2 cut(s) 356, 392
ClaI ATCGAT 1 cut(s) 544
CsiI ACCWGGT 1 cut(s) 482
Csp6I GTAC 2 cut(s) 383, 567
CspCI CAANNNNNGTGG 2 cut(s) 196, 231
CviAII CATG 1 cut(s) 241
CviJI RGCY 9 cut(s) 5, 99, 179, 191, 199, 293, 358, 389, 393
CviKI_1 RGCY 9 cut(s) 5, 99, 179, 191, 199, 293, 358, 389, 393
CviQI GTAC 2 cut(s) 383, 567
DdeI CTNAG 2 cut(s) 144, 611
DpnI GATC 2 cut(s) 543, 547
DpnII GATC 2 cut(s) 541, 545
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 207
EcoO109I RGGNCCY 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 482
FaeI CATG 1 cut(s) 244
FaiI YATR 2 cut(s) 242, 593
FaqI GGGAC 1 cut(s) 321
FatI CATG 1 cut(s) 240
FauI CCCGC 1 cut(s) 403
Fnu4HI GCNGC 6 cut(s) 306, 366, 369, 372, 490, 608
FokI GGATG 4 cut(s) 183, 295, 392, 412
Fsp4HI GCNGC 6 cut(s) 306, 366, 369, 372, 490, 608
GluI GCNGC 6 cut(s) 306, 366, 369, 372, 490, 608
HaeIII GGCC 2 cut(s) 358, 393
HapII CCGG 1 cut(s) 600
Hin1II CATG 1 cut(s) 244
HindIII AAGCTT 1 cut(s) 197
HinfI GANTC 2 cut(s) 219, 475
HpaII CCGG 1 cut(s) 600
HphI GGTGA 2 cut(s) 337, 478
Hpy166II GTNNAC 1 cut(s) 88
Hpy188I TCNGA 3 cut(s) 24, 343, 573
Hpy188III TCNNGA 3 cut(s) 135, 185, 613
Hpy8I GTNNAC 1 cut(s) 88
HpyAV CCTTC 2 cut(s) 346, 457
HpyCH4III ACNGT 1 cut(s) 215
HpyCH4IV ACGT 1 cut(s) 505
HpyCH4V TGCA 4 cut(s) 93, 498, 556, 619
HpyF10VI GCNNNNNNNGC 4 cut(s) 371, 395, 495, 616
HpyF3I CTNAG 2 cut(s) 144, 611
HpySE526I ACGT 1 cut(s) 505
Hsp92II CATG 1 cut(s) 244
Kzo9I GATC 2 cut(s) 541, 545
LmnI GCTCC 5 cut(s) 62, 96, 154, 184, 196
Lsp1109I GCAGC 4 cut(s) 352, 355, 358, 594
LweI GCATC 5 cut(s) 161, 317, 396, 434, 606
MabI ACCWGGT 1 cut(s) 482
MaeII ACGT 1 cut(s) 505
MalI GATC 2 cut(s) 543, 547
MbiI CCGCTC 1 cut(s) 65
MboI GATC 2 cut(s) 541, 545
MboII GAAGA 1 cut(s) 119
MhlI GDGCHC 1 cut(s) 159
MluCI AATT 2 cut(s) 139, 244
MlyI GAGTC 1 cut(s) 469
MseI TTAA 1 cut(s) 450
MslI CAYNNNNRTG 1 cut(s) 81
MspI CCGG 1 cut(s) 600
MspR9I CCNGG 1 cut(s) 484
MvaI CCWGG 1 cut(s) 484
MwoI GCNNNNNNNGC 4 cut(s) 371, 395, 495, 616
NdeII GATC 2 cut(s) 541, 545
NlaIII CATG 1 cut(s) 244
NlaIV GGNNCC 4 cut(s) 74, 118, 357, 394
PfeI GAWTC 1 cut(s) 219
PkrI GCNGC 6 cut(s) 307, 367, 370, 373, 491, 609
PleI GAGTC 1 cut(s) 469
PpsI GAGTC 1 cut(s) 469
Psp6I CCWGG 1 cut(s) 482
PspGI CCWGG 1 cut(s) 482
PspN4I GGNNCC 4 cut(s) 74, 118, 357, 394
PspPI GGNCC 2 cut(s) 356, 392
PstI CTGCAG 1 cut(s) 95
RsaI GTAC 2 cut(s) 384, 568
RsaNI GTAC 2 cut(s) 383, 567
RseI CAYNNNNRTG 1 cut(s) 81
SaqAI TTAA 1 cut(s) 450
SatI GCNGC 6 cut(s) 306, 366, 369, 372, 490, 608
Sau3AI GATC 2 cut(s) 541, 545
Sau96I GGNCC 2 cut(s) 356, 392
SchI GAGTC 1 cut(s) 469
ScrFI CCNGG 1 cut(s) 484
SduI GDGCHC 1 cut(s) 159
SexAI ACCWGGT 1 cut(s) 482
SfaNI GCATC 5 cut(s) 161, 317, 396, 434, 606
SfcI CTRYAG 1 cut(s) 91
SmiMI CAYNNNNRTG 1 cut(s) 81
Sse9I AATT 2 cut(s) 139, 244
SsiI CCGC 5 cut(s) 65, 305, 323, 396, 489
StyD4I CCNGG 1 cut(s) 482
TaaI ACNGT 1 cut(s) 215
TaiI ACGT 1 cut(s) 508
TaqI TCGA 1 cut(s) 544
TasI AATT 2 cut(s) 139, 244
TatI WGTACW 1 cut(s) 382
TauI GCSGC 2 cut(s) 308, 492
TfiI GAWTC 1 cut(s) 219
Tru1I TTAA 1 cut(s) 450
Tru9I TTAA 1 cut(s) 450
TseI GCWGC 4 cut(s) 365, 368, 371, 607
TspDTI ATGAA 2 cut(s) 257, 550
XapI RAATTY 2 cut(s) 139, 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.