Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001343

Physical Location & Seq

Genomic Coordinates Reverse (-)

14779529 .. 14781727

Gene Structure 2199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G126200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 888 bp

ATGGCTGGCTCAAAGCAAATCCATCTTGTGTTCATTTTTTTTACATTTTTTCTTCTGTGCTTGGACCCAACACCAACTGGAGCTGAAGTTTCTGGTGCAGGGCATAAAATAGAATTTGAATACAAGGCAGGGAGCAAGAAAGGACCAGAGCGCTGGGGAGACCTTAAGAAAGAATGGATGACATGCAAGAATGGGAAAGGCCAATCACCCATAGATTTAAGGGATGGGATTGCCACCAAAGTGAACTCAAGTTTAGAGCATTTTAAAATCAGTTATAAGCCTACAAAAGCCATTATGAAGAATGAAGGTCATGCTATCGCGGTTATATGGGACGGTGATGCTGGATCAATCAGTATCAATGGCAAAGAATACAACCTCAGACAATGCCATTGGCACTCCCCCTCAGAGCATTCCATTAATGGCAAAAGGTATGATGTGGAATTGCACATGGTTCACAGAGCCAAGAACAACAGTGATGTAGCTGTGGTTGGCTTCCTCTACAAAATTGGCCAACCAAATCCTTTCATCTCAAAGGTCAAAAAGGCGATAGCGTCGATGATGGATGTAGAGAAGGAGGTACAACTGGGAGTGATTGATCCTCGGAAGATGAAGAAGGCTAAGCTCGGGTTTCAGGACCCGAAAAAGAGGAAGATGAAAAAGGCTAGCTCGAAATTTTACAGATACAGTGGATCATTCACAACCCCTCCTTGCAGTGAAGGAGTAACTTGGACCATAAACAAACAGGTACATACTGTTTCAATAGCACAAGTGAAGTTGCTTCAACAAGCCGTTTTCGATTTTGCAGAGATGAATGCAAGACCAGTACAACCTCTCAATGGCCGGGAGGTCAAGCTCCACGGTTCAACGTTTGTCAATTTCAAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Carb_anhydrase

Protein Analysis

296

Amino Acids

33.13

Weight (kDa)

9.71

Isoelectric Point (pI)

28.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001343)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g16730 FvH4_6g16740 FvH4_6g16840 FvH4_6g16850
malus_domestica	MD04G1089400.v1.1 MD04G1089500.v1.1 MD12G1107800.v1.1 MD12G1108000.v1.1 MD12G1108100.v1.1
prunus_persica	Prupe.7G126200_v2.0.a1 Prupe.7G126300_v2.0.a1 Prupe.7G126400_v2.0.a1 Prupe.7G126500_v2.0.a1
pyrus_communis	pycom12g10780 pycom12g10800
rosa_chinensis	RchiOBHm_Chr3g0470661 RchiOBHm_Chr3g0470681 RchiOBHm_Chr3g0470851 RchiOBHm_Chr3g0470871
rosa_laevigata	RLG00000024238 RLG00000024240 RLG00000024248 RLG00000024249
rosa_multiflora	Rmu_co8349665.1_g000001 Rmu_sc0000867.1_g000003 Rmu_sc0002790.1_g000026
rosa_roxburghii	Rroxscaffold_6G00410460 Rroxscaffold_6G00410480 Rroxscaffold_6G00410610 Rroxscaffold_6G00410620
rosa_rugosa	Rorug03G0111500 Rorug03G0111600 Rorug03G0111600 Rorug03G0111700 Rorug03G0111900 Rorug03G0113200
rosa_samantha	Rh3AG161300 Rh3AG161600 Rh3BG185800 Rh3BG186100 Rh3BG188000 Rh3BG188200 Rh3CG176100 Rh3CG176500 Rh3CG178000 Rh3CG178200 Rh3DG187700 Rh3DG187800 Rh3DG189000 Rh3DG189100
rosa_wichuraiana	Rw0G004610 Rw3G015240 Rw3G015340 Rw3G015350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	276
AccII	CGCG	1 cut(s)	320
AciI	CCGC	1 cut(s)	320
AclI	AACGTT	1 cut(s)	866
AclWI	GGATC	3 cut(s)	352, 590, 697
AcoI	YGGCCR	2 cut(s)	508, 838
AcsI	RAATTY	2 cut(s)	113, 671
AcuI	CTGAAG	1 cut(s)	105
AfaI	GTAC	3 cut(s)	579, 747, 825
AfeI	AGCGCT	1 cut(s)	152
AfiI	CCNNNNNNNGG	1 cut(s)	836
AflII	CTTAAG	1 cut(s)	164
AgsI	TTSAA	5 cut(s)	119, 759, 782, 864, 880
AleI	CACNNNNGTG	1 cut(s)	239
AluBI	AGCT	5 cut(s)	83, 482, 622, 666, 853
AluI	AGCT	5 cut(s)	83, 482, 622, 666, 853
Alw26I	GTCTC	1 cut(s)	153
AlwI	GGATC	3 cut(s)	352, 590, 697
Ama87I	CYCGRG	1 cut(s)	623
Aor51HI	AGCGCT	1 cut(s)	152
AoxI	GGCC	3 cut(s)	199, 508, 838
ApoI	RAATTY	2 cut(s)	113, 671
AseI	ATTAAT	1 cut(s)	417
AspLEI	GCGC	1 cut(s)	153
AspS9I	GGNCC	4 cut(s)	64, 143, 634, 729
AsuC2I	CCSGG	1 cut(s)	842
AsuHPI	GGTGA	2 cut(s)	198, 347
AsuNHI	GCTAGC	1 cut(s)	662
AvaI	CYCGRG	1 cut(s)	623
AvaII	GGWCC	4 cut(s)	64, 143, 634, 729
BalI	TGGCCA	1 cut(s)	510
BccI	CCATC	3 cut(s)	30, 218, 553
BceAI	ACGGC	1 cut(s)	773
BcnI	CCSGG	1 cut(s)	842
BcoDI	GTCTC	1 cut(s)	153
BfaI	CTAG	1 cut(s)	663
BfoI	RGCGCY	1 cut(s)	154
BfrI	CTTAAG	1 cut(s)	164
BlpI	GCTNAGC	1 cut(s)	618
Bme1390I	CCNGG	1 cut(s)	842
Bme18I	GGWCC	4 cut(s)	64, 143, 634, 729
BmeT110I	CYCGRG	1 cut(s)	623
BmgT120I	GGNCC	4 cut(s)	64, 143, 634, 729
BmiI	GGNNCC	2 cut(s)	66, 636
BmrFI	CCNGG	1 cut(s)	842
BmrI	ACTGGG	1 cut(s)	593
BmsI	GCATC	1 cut(s)	328
BmtI	GCTAGC	1 cut(s)	666
BmuI	ACTGGG	1 cut(s)	593
BpmI	CTGGAG	1 cut(s)	99
Bpu1102I	GCTNAGC	1 cut(s)	618
BpuEI	CTTGAG	1 cut(s)	232
BpuMI	CCSGG	1 cut(s)	842
BsaI	GGTCTC	1 cut(s)	153
BsaJI	CCNNGG	2 cut(s)	599, 856
BsaXI	ACNNNNNCTCC	4 cut(s)	72, 102, 688, 718
Bsc4I	CCNNNNNNNGG	1 cut(s)	836
Bse1I	ACTGG	3 cut(s)	82, 588, 821
BseDI	CCNNGG	2 cut(s)	599, 856
BseGI	GGATG	3 cut(s)	183, 229, 568
BseLI	CCNNNNNNNGG	1 cut(s)	836
BseMII	CTCAG	2 cut(s)	391, 417
BseNI	ACTGG	3 cut(s)	82, 588, 821
BseYI	CCCAGC	1 cut(s)	153
BsgI	GTGCAG	1 cut(s)	117
Bsh1236I	CGCG	1 cut(s)	320
BshFI	GGCC	3 cut(s)	201, 510, 840
BsiHKCI	CYCGRG	1 cut(s)	623
BsiSI	CCGG	1 cut(s)	841
BslFI	GGGAC	1 cut(s)	344
BslI	CCNNNNNNNGG	1 cut(s)	836
BsmAI	GTCTC	1 cut(s)	153
BsmFI	GGGAC	1 cut(s)	344
BsmI	GAATGC	2 cut(s)	409, 817
BsnI	GGCC	3 cut(s)	201, 510, 840
Bso31I	GGTCTC	1 cut(s)	153
BsoBI	CYCGRG	1 cut(s)	623
Bsp143I	GATC	3 cut(s)	344, 595, 689
Bsp1720I	GCTNAGC	1 cut(s)	618
BspACI	CCGC	1 cut(s)	320
BspANI	GGCC	3 cut(s)	201, 510, 840
BspCNI	CTCAG	2 cut(s)	390, 416
BspFNI	CGCG	1 cut(s)	320
BspLI	GGNNCC	2 cut(s)	66, 636
BspOI	GCTAGC	1 cut(s)	666
BspPI	GGATC	3 cut(s)	352, 590, 697
BspTI	CTTAAG	1 cut(s)	164
BspTNI	GGTCTC	1 cut(s)	153
BsrI	ACTGG	3 cut(s)	82, 588, 821
BssECI	CCNNGG	2 cut(s)	599, 856
BssMI	GATC	3 cut(s)	344, 595, 689
Bst4CI	ACNGT	5 cut(s)	335, 473, 686, 754, 860
BstAFI	CTTAAG	1 cut(s)	164
BstC8I	GCNNGC	2 cut(s)	7, 664
BstDEI	CTNAG	3 cut(s)	377, 403, 618
BstDSI	CCRYGG	1 cut(s)	856
BstF5I	GGATG	3 cut(s)	183, 229, 568
BstFNI	CGCG	1 cut(s)	320
BstH2I	RGCGCY	1 cut(s)	154
BstHHI	GCGC	1 cut(s)	153
BstKTI	GATC	3 cut(s)	347, 598, 692
BstMAI	GTCTC	1 cut(s)	153
BstMBI	GATC	3 cut(s)	344, 595, 689
BstNSI	RCATGY	1 cut(s)	186
BstSCI	CCNGG	1 cut(s)	840
BstUI	CGCG	1 cut(s)	320
BstXI	CCANNNNNNTGG	1 cut(s)	153
BsuRI	GGCC	3 cut(s)	201, 510, 840
BtgI	CCRYGG	1 cut(s)	856
BtsCI	GGATG	3 cut(s)	183, 229, 568
BtsI	GCAGTG	1 cut(s)	718
BtsIMutI	CAGTG	3 cut(s)	478, 691, 718
Cac8I	GCNNGC	2 cut(s)	7, 664
CfoI	GCGC	1 cut(s)	153
Cfr13I	GGNCC	4 cut(s)	64, 143, 634, 729
CseI	GACGC	1 cut(s)	540
Csp6I	GTAC	3 cut(s)	578, 746, 824
CviAII	CATG	3 cut(s)	183, 311, 448
CviQI	GTAC	3 cut(s)	578, 746, 824
DdeI	CTNAG	3 cut(s)	377, 403, 618
DpnI	GATC	3 cut(s)	346, 597, 691
DpnII	GATC	3 cut(s)	344, 595, 689
DraI	TTTAAA	1 cut(s)	265
EaeI	YGGCCR	2 cut(s)	508, 838
Eco31I	GGTCTC	1 cut(s)	153
Eco47I	GGWCC	4 cut(s)	64, 143, 634, 729
Eco47III	AGCGCT	1 cut(s)	152
Eco57I	CTGAAG	1 cut(s)	105
Eco88I	CYCGRG	1 cut(s)	623
EcoO109I	RGGNCCY	1 cut(s)	634
FaeI	CATG	3 cut(s)	186, 314, 451
FaqI	GGGAC	1 cut(s)	344
FatI	CATG	3 cut(s)	182, 310, 447
FokI	GGATG	3 cut(s)	190, 236, 575
FspBI	CTAG	1 cut(s)	663
GlaI	GCGC	1 cut(s)	152
GsaI	CCCAGC	1 cut(s)	157
GsuI	CTGGAG	1 cut(s)	99
HaeII	RGCGCY	1 cut(s)	154
HaeIII	GGCC	3 cut(s)	201, 510, 840
HapII	CCGG	1 cut(s)	841
HgaI	GACGC	1 cut(s)	540
HhaI	GCGC	1 cut(s)	153
Hin1II	CATG	3 cut(s)	186, 314, 451
Hin6I	GCGC	1 cut(s)	151
HinP1I	GCGC	1 cut(s)	151
HpaII	CCGG	1 cut(s)	841
HphI	GGTGA	2 cut(s)	198, 347
Hpy166II	GTNNAC	2 cut(s)	244, 454
Hpy188I	TCNGA	3 cut(s)	380, 406, 603
Hpy188III	TCNNGA	1 cut(s)	632
Hpy8I	GTNNAC	2 cut(s)	244, 454
Hpy99I	CGWCG	1 cut(s)	556
HpyAV	CCTTC	4 cut(s)	299, 565, 607, 710
HpyCH4III	ACNGT	5 cut(s)	335, 473, 686, 754, 860
HpyCH4IV	ACGT	1 cut(s)	866
HpyCH4V	TGCA	6 cut(s)	98, 186, 445, 711, 803, 815
HpyF3I	CTNAG	3 cut(s)	377, 403, 618
HpySE526I	ACGT	1 cut(s)	866
Hsp92II	CATG	3 cut(s)	186, 314, 451
HspAI	GCGC	1 cut(s)	151
Kzo9I	GATC	3 cut(s)	344, 595, 689
LmnI	GCTCC	3 cut(s)	80, 132, 858
LweI	GCATC	1 cut(s)	328
MaeI	CTAG	1 cut(s)	663
MaeII	ACGT	1 cut(s)	866
MaeIII	GTNAC	1 cut(s)	721
MalI	GATC	3 cut(s)	346, 597, 691
MboI	GATC	3 cut(s)	344, 595, 689
MboII	GAAGA	5 cut(s)	44, 310, 616, 622, 661
MlsI	TGGCCA	1 cut(s)	510
MluCI	AATT	5 cut(s)	113, 440, 504, 671, 874
MluNI	TGGCCA	1 cut(s)	510
MnlI	CCTC	9 cut(s)	386, 412, 506, 568, 609, 639, 714, 838, 840
Mox20I	TGGCCA	1 cut(s)	510
MscI	TGGCCA	1 cut(s)	510
MseI	TTAA	4 cut(s)	165, 218, 264, 417
MslI	CAYNNNNRTG	1 cut(s)	239
Msp20I	TGGCCA	1 cut(s)	510
MspCI	CTTAAG	1 cut(s)	164
MspI	CCGG	1 cut(s)	841
MspR9I	CCNGG	1 cut(s)	842
Mva1269I	GAATGC	2 cut(s)	409, 817
MvnI	CGCG	1 cut(s)	320
NciI	CCSGG	1 cut(s)	842
NdeII	GATC	3 cut(s)	344, 595, 689
NheI	GCTAGC	1 cut(s)	662
NlaIII	CATG	3 cut(s)	186, 314, 451
NlaIV	GGNNCC	2 cut(s)	66, 636
NspI	RCATGY	1 cut(s)	186
OliI	CACNNNNGTG	1 cut(s)	239
PctI	GAATGC	2 cut(s)	409, 817
PpuMI	RGGWCCY	1 cut(s)	634
PshBI	ATTAAT	1 cut(s)	417
PsiI	TTATAA	1 cut(s)	276
Psp1406I	AACGTT	1 cut(s)	866
Psp5II	RGGWCCY	1 cut(s)	634
PspFI	CCCAGC	1 cut(s)	153
PspN4I	GGNNCC	2 cut(s)	66, 636
PspPI	GGNCC	4 cut(s)	64, 143, 634, 729
PspPPI	RGGWCCY	1 cut(s)	634
RsaI	GTAC	3 cut(s)	579, 747, 825
RsaNI	GTAC	3 cut(s)	578, 746, 824
RseI	CAYNNNNRTG	1 cut(s)	239
SaqAI	TTAA	4 cut(s)	165, 218, 264, 417
Sau3AI	GATC	3 cut(s)	344, 595, 689
Sau96I	GGNCC	4 cut(s)	64, 143, 634, 729
ScrFI	CCNGG	1 cut(s)	842
SfaNI	GCATC	1 cut(s)	328
SinI	GGWCC	4 cut(s)	64, 143, 634, 729
SmiMI	CAYNNNNRTG	1 cut(s)	239
SmlI	CTYRAG	2 cut(s)	164, 247
SmoI	CTYRAG	2 cut(s)	164, 247
Sse9I	AATT	5 cut(s)	113, 440, 504, 671, 874
SsiI	CCGC	1 cut(s)	320
SspMI	CTAG	1 cut(s)	663
StyD4I	CCNGG	1 cut(s)	840
TaaI	ACNGT	5 cut(s)	335, 473, 686, 754, 860
TaiI	ACGT	1 cut(s)	869
TaqI	TCGA	3 cut(s)	554, 668, 795
TasI	AATT	5 cut(s)	113, 440, 504, 671, 874
TatI	WGTACW	1 cut(s)	823
Tru1I	TTAA	4 cut(s)	165, 218, 264, 417
Tru9I	TTAA	4 cut(s)	165, 218, 264, 417
TscAI	CASTG	3 cut(s)	478, 691, 718
TspDTI	ATGAA	7 cut(s)	22, 311, 318, 514, 623, 668, 824
TspRI	CASTG	3 cut(s)	478, 691, 718
Vha464I	CTTAAG	1 cut(s)	164
VpaK11BI	GGWCC	4 cut(s)	64, 143, 634, 729
VspI	ATTAAT	1 cut(s)	417
XapI	RAATTY	2 cut(s)	113, 671
XceI	RCATGY	1 cut(s)	186
XspI	CTAG	1 cut(s)	663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.