Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001343

Physical Location & Seq

Genomic Coordinates Reverse (-)

14787538 .. 14789788

Gene Structure 2251 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G126500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1017 bp

ATGATGGTTGAATCAAAGCAAGCCCATCTTCAGCTCTTAGTTTTTACTTTTTTTCTTCTCTACTGGCATCCAACACTGATTAGAGCTAAAGAAGCTGAGCATGATGAGTTTGATTATAAGGAAGGGAGTAAGAAGGGACCAGAACACTGGGGAGAGCTTAAGAAAGAATGGGCACGATGTAAGGATGGGAAATTTCAATCACCAATAGGTTTGTCGGATGATCATGTCACCAACGTGACCTCAAGTTTAGAGGATCTTAAAATGAGTTATAAGCCTTCAAATGCAACTGTCAAGAACGAAGGTCCCTATCTTGCGATCGAATGGGAAGGTGATGCTGGATCAATCAAAATCAACGGCACAGATTACTTCTTCAAACAATGTCATTGGCACACCCCCTCTGAGCATTCCATTAATGGCATAAGGTATGATCTGGAACTGCACATGGTTCATCAAAGCACCGACCCGAAAATAAGGAACAGTATTGCTGTACTCGCATTTCTATACCACATTGGCAACCCCAACCTTTTTCTCTCAAAGGTGAACAAAGATATAATGTCTGAGGTTGCTACAAAGGAGGTACACTTAGGAGTGATTGATCCAAGGGAAATAAAATGGACTAGCTTCAGTTTTTACAGATACGTTGGATCACTCACATCCCCTCCTTGCGCTGAAGGAGTTATTTGGACCATAAACGAAAAGGTAAAACATGTTTCAAGAGAACAAGTGGAGTTACTTCAAGAAGCTGTGGATGATTATGCAGAGATGAATACAAGACCATTACAACCTCTCAATGACCGAGAAATCAAGCACTATGGCCTGTCGTTAAGTGATGCACCAAGCCCCCATGAGGGCAACCACGGCCCCAAGCAATATAGGTCAGTTAGTGCACAAAGCCCCAAGGAATCTGGCTCAATTAATGCACCAAAACCAAGCCACCCAGAGGGTAACCAAAGCCCTAAGCAATCTCTCAGATTATTTACGCACATAACAGTGTGTATCTTCGCATATCTTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Carb_anhydrase

Protein Analysis

339

Amino Acids

38.51

Weight (kDa)

6.31

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001343)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g16730 FvH4_6g16740 FvH4_6g16840 FvH4_6g16850
malus_domestica	MD04G1089400.v1.1 MD04G1089500.v1.1 MD12G1107800.v1.1 MD12G1108000.v1.1 MD12G1108100.v1.1
prunus_persica	Prupe.7G126200_v2.0.a1 Prupe.7G126300_v2.0.a1 Prupe.7G126400_v2.0.a1 Prupe.7G126500_v2.0.a1
pyrus_communis	pycom12g10780 pycom12g10800
rosa_chinensis	RchiOBHm_Chr3g0470661 RchiOBHm_Chr3g0470681 RchiOBHm_Chr3g0470851 RchiOBHm_Chr3g0470871
rosa_laevigata	RLG00000024238 RLG00000024240 RLG00000024248 RLG00000024249
rosa_multiflora	Rmu_co8349665.1_g000001 Rmu_sc0000867.1_g000003 Rmu_sc0002790.1_g000026
rosa_roxburghii	Rroxscaffold_6G00410460 Rroxscaffold_6G00410480 Rroxscaffold_6G00410610 Rroxscaffold_6G00410620
rosa_rugosa	Rorug03G0111500 Rorug03G0111600 Rorug03G0111600 Rorug03G0111700 Rorug03G0111900 Rorug03G0113200
rosa_samantha	Rh3AG161300 Rh3AG161600 Rh3BG185800 Rh3BG186100 Rh3BG188000 Rh3BG188200 Rh3CG176100 Rh3CG176500 Rh3CG178000 Rh3CG178200 Rh3DG187700 Rh3DG187800 Rh3DG189000 Rh3DG189100
rosa_wichuraiana	Rw0G004610 Rw3G015240 Rw3G015340 Rw3G015350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	117, 270
AclWI	GGATC	4 cut(s)	261, 346, 590, 652
AcsI	RAATTY	1 cut(s)	191
AcuI	CTGAAG	3 cut(s)	14, 607, 690
AfaI	GTAC	2 cut(s)	489, 579
AfiI	CCNNNNNNNGG	3 cut(s)	847, 848, 940
AflII	CTTAAG	1 cut(s)	158
AflIII	ACRYGT	1 cut(s)	706
AgsI	TTSAA	6 cut(s)	11, 197, 279, 373, 714, 737
AleI	CACNNNNGTG	1 cut(s)	233
AluBI	AGCT	6 cut(s)	34, 86, 95, 157, 621, 743
AluI	AGCT	6 cut(s)	34, 86, 95, 157, 621, 743
Alw21I	GWGCWC	1 cut(s)	889
Alw44I	GTGCAC	1 cut(s)	885
AlwI	GGATC	4 cut(s)	261, 346, 590, 652
AoxI	GGCC	2 cut(s)	814, 859
ApaLI	GTGCAC	1 cut(s)	885
ApoI	RAATTY	1 cut(s)	191
AseI	ATTAAT	2 cut(s)	411, 915
AspLEI	GCGC	1 cut(s)	668
AspS9I	GGNCC	4 cut(s)	137, 302, 684, 860
AsuHPI	GGTGA	4 cut(s)	192, 220, 341, 550
AvaII	GGWCC	3 cut(s)	137, 302, 684
BaeGI	GKGCMC	2 cut(s)	175, 889
Bbv12I	GWGCWC	1 cut(s)	889
BccI	CCATC	2 cut(s)	33, 179
BceAI	ACGGC	2 cut(s)	370, 874
BclI	TGATCA	1 cut(s)	220
BfaI	CTAG	1 cut(s)	618
BfrI	CTTAAG	1 cut(s)	158
BlpI	GCTNAGC	1 cut(s)	96
Bme18I	GGWCC	3 cut(s)	137, 302, 684
BmgT120I	GGNCC	4 cut(s)	137, 302, 684, 860
BmiI	GGNNCC	3 cut(s)	138, 304, 862
BmrI	ACTGGG	1 cut(s)	157
BmsI	GCATC	3 cut(s)	76, 322, 820
BmuI	ACTGGG	1 cut(s)	157
Bpu10I	CCTNAGC	1 cut(s)	957
Bpu1102I	GCTNAGC	1 cut(s)	96
BpuEI	CTTGAG	1 cut(s)	226
BsaJI	CCNNGG	3 cut(s)	599, 856, 897
BsaXI	ACNNNNNCTCC	2 cut(s)	643, 673
Bsc4I	CCNNNNNNNGG	3 cut(s)	847, 848, 940
Bse1I	ACTGG	2 cut(s)	68, 152
BseDI	CCNNGG	3 cut(s)	599, 856, 897
BseGI	GGATG	5 cut(s)	67, 190, 223, 653, 754
BseLI	CCNNNNNNNGG	3 cut(s)	847, 848, 940
BseMII	CTCAG	4 cut(s)	87, 390, 549, 982
BseNI	ACTGG	2 cut(s)	68, 152
BseSI	GKGCMC	2 cut(s)	175, 889
BsgI	GTGCAG	1 cut(s)	422
Bsh1285I	CGRYCG	1 cut(s)	318
BshFI	GGCC	2 cut(s)	816, 861
BsiEI	CGRYCG	1 cut(s)	318
BsiHKAI	GWGCWC	1 cut(s)	889
BslFI	GGGAC	2 cut(s)	150, 288
BslI	CCNNNNNNNGG	3 cut(s)	847, 848, 940
BsmFI	GGGAC	2 cut(s)	150, 288
BsmI	GAATGC	1 cut(s)	403
BsnI	GGCC	2 cut(s)	816, 861
Bsp1286I	GDGCHC	2 cut(s)	175, 889
Bsp143I	GATC	7 cut(s)	220, 253, 315, 338, 427, 595, 644
Bsp1720I	GCTNAGC	1 cut(s)	96
BspANI	GGCC	2 cut(s)	816, 861
BspCNI	CTCAG	4 cut(s)	88, 391, 550, 981
BspLI	GGNNCC	3 cut(s)	138, 304, 862
BspPI	GGATC	4 cut(s)	261, 346, 590, 652
BspTI	CTTAAG	1 cut(s)	158
BsrI	ACTGG	2 cut(s)	68, 152
BssECI	CCNNGG	3 cut(s)	599, 856, 897
BssMI	GATC	7 cut(s)	220, 253, 315, 338, 427, 595, 644
BssT1I	CCWWGG	2 cut(s)	599, 897
Bst4CI	ACNGT	3 cut(s)	289, 479, 991
BstAFI	CTTAAG	1 cut(s)	158
BstC8I	GCNNGC	1 cut(s)	21
BstDEI	CTNAG	7 cut(s)	37, 96, 399, 558, 583, 957, 968
BstDSI	CCRYGG	1 cut(s)	856
BstEII	GGTNACC	1 cut(s)	944
BstF5I	GGATG	5 cut(s)	67, 190, 223, 653, 754
BstHHI	GCGC	1 cut(s)	668
BstKTI	GATC	7 cut(s)	223, 256, 318, 341, 430, 598, 647
BstMBI	GATC	7 cut(s)	220, 253, 315, 338, 427, 595, 644
BstMCI	CGRYCG	1 cut(s)	318
BstMWI	GCNNNNNNNGC	3 cut(s)	92, 491, 858
BstNSI	RCATGY	1 cut(s)	710
BstPI	GGTNACC	1 cut(s)	944
BstSLI	GKGCMC	2 cut(s)	175, 889
BstX2I	RGATCY	1 cut(s)	253
BstXI	CCANNNNNNTGG	1 cut(s)	147
BstYI	RGATCY	1 cut(s)	253
BsuRI	GGCC	2 cut(s)	816, 861
BtgI	CCRYGG	1 cut(s)	856
BtsCI	GGATG	5 cut(s)	67, 190, 223, 653, 754
BtsIMutI	CAGTG	3 cut(s)	74, 145, 996
Cac8I	GCNNGC	1 cut(s)	21
CfoI	GCGC	1 cut(s)	668
Cfr13I	GGNCC	4 cut(s)	137, 302, 684, 860
Csp6I	GTAC	2 cut(s)	488, 578
CviAII	CATG	5 cut(s)	101, 224, 442, 707, 845
CviQI	GTAC	2 cut(s)	488, 578
DdeI	CTNAG	7 cut(s)	37, 96, 399, 558, 583, 957, 968
DpnI	GATC	7 cut(s)	222, 255, 317, 340, 429, 597, 646
DpnII	GATC	7 cut(s)	220, 253, 315, 338, 427, 595, 644
Eco130I	CCWWGG	2 cut(s)	599, 897
Eco47I	GGWCC	3 cut(s)	137, 302, 684
Eco57I	CTGAAG	3 cut(s)	14, 607, 690
Eco91I	GGTNACC	1 cut(s)	944
EcoO109I	RGGNCCY	1 cut(s)	302
EcoO65I	GGTNACC	1 cut(s)	944
EcoT14I	CCWWGG	2 cut(s)	599, 897
ErhI	CCWWGG	2 cut(s)	599, 897
FaeI	CATG	5 cut(s)	104, 227, 445, 710, 848
FalI	AAGNNNNNCTT	2 cut(s)	12, 44
FaqI	GGGAC	2 cut(s)	150, 288
FatI	CATG	5 cut(s)	100, 223, 441, 706, 844
FbaI	TGATCA	1 cut(s)	220
FokI	GGATG	5 cut(s)	54, 197, 230, 640, 761
FspBI	CTAG	1 cut(s)	618
GlaI	GCGC	1 cut(s)	667
HaeIII	GGCC	2 cut(s)	816, 861
HhaI	GCGC	1 cut(s)	668
Hin1II	CATG	5 cut(s)	104, 227, 445, 710, 848
Hin6I	GCGC	1 cut(s)	666
HinP1I	GCGC	1 cut(s)	666
HinfI	GANTC	2 cut(s)	11, 902
HphI	GGTGA	4 cut(s)	192, 220, 341, 550
Hpy166II	GTNNAC	3 cut(s)	541, 580, 887
Hpy188I	TCNGA	4 cut(s)	217, 400, 559, 971
Hpy188III	TCNNGA	4 cut(s)	292, 431, 714, 737
Hpy8I	GTNNAC	3 cut(s)	541, 580, 887
HpyAV	CCTTC	6 cut(s)	116, 127, 285, 293, 320, 665
HpyCH4III	ACNGT	3 cut(s)	289, 479, 991
HpyCH4IV	ACGT	2 cut(s)	234, 639
HpyCH4V	TGCA	6 cut(s)	284, 439, 758, 833, 887, 920
HpyF10VI	GCNNNNNNNGC	3 cut(s)	92, 491, 858
HpyF3I	CTNAG	7 cut(s)	37, 96, 399, 558, 583, 957, 968
HpySE526I	ACGT	2 cut(s)	234, 639
Hsp92II	CATG	5 cut(s)	104, 227, 445, 710, 848
HspAI	GCGC	1 cut(s)	666
Ksp22I	TGATCA	1 cut(s)	220
Kzo9I	GATC	7 cut(s)	220, 253, 315, 338, 427, 595, 644
LpnPI	CCDG	8 cut(s)	49, 133, 153, 321, 416, 830, 891, 951
LweI	GCATC	3 cut(s)	76, 322, 820
MaeI	CTAG	1 cut(s)	618
MaeII	ACGT	2 cut(s)	234, 639
MaeIII	GTNAC	4 cut(s)	226, 235, 729, 944
MalI	GATC	7 cut(s)	222, 255, 317, 340, 429, 597, 646
MboI	GATC	7 cut(s)	220, 253, 315, 338, 427, 595, 644
MboII	GAAGA	5 cut(s)	20, 47, 361, 991, 1001
MflI	RGATCY	1 cut(s)	253
MhlI	GDGCHC	2 cut(s)	175, 889
MluCI	AATT	2 cut(s)	191, 912
MmeI	TCCRAC	3 cut(s)	95, 195, 622
MnlI	CCTC	9 cut(s)	244, 250, 406, 553, 568, 669, 795, 841, 934
MseI	TTAA	5 cut(s)	159, 258, 411, 824, 915
MslI	CAYNNNNRTG	2 cut(s)	233, 989
MspCI	CTTAAG	1 cut(s)	158
Mva1269I	GAATGC	1 cut(s)	403
MwoI	GCNNNNNNNGC	3 cut(s)	92, 491, 858
NdeII	GATC	7 cut(s)	220, 253, 315, 338, 427, 595, 644
NlaIII	CATG	5 cut(s)	104, 227, 445, 710, 848
NlaIV	GGNNCC	3 cut(s)	138, 304, 862
NmuCI	GTSAC	2 cut(s)	226, 235
NspI	RCATGY	1 cut(s)	710
OliI	CACNNNNGTG	1 cut(s)	233
PciI	ACATGT	1 cut(s)	706
PctI	GAATGC	1 cut(s)	403
PfeI	GAWTC	2 cut(s)	11, 902
Ple19I	CGATCG	1 cut(s)	318
PpuMI	RGGWCCY	1 cut(s)	302
PscI	ACATGT	1 cut(s)	706
PshBI	ATTAAT	2 cut(s)	411, 915
PsiI	TTATAA	2 cut(s)	117, 270
Psp5II	RGGWCCY	1 cut(s)	302
PspEI	GGTNACC	1 cut(s)	944
PspN4I	GGNNCC	3 cut(s)	138, 304, 862
PspPI	GGNCC	4 cut(s)	137, 302, 684, 860
PspPPI	RGGWCCY	1 cut(s)	302
PsuI	RGATCY	1 cut(s)	253
PvuI	CGATCG	1 cut(s)	318
RsaI	GTAC	2 cut(s)	489, 579
RsaNI	GTAC	2 cut(s)	488, 578
RseI	CAYNNNNRTG	2 cut(s)	233, 989
SaqAI	TTAA	5 cut(s)	159, 258, 411, 824, 915
Sau3AI	GATC	7 cut(s)	220, 253, 315, 338, 427, 595, 644
Sau96I	GGNCC	4 cut(s)	137, 302, 684, 860
SduI	GDGCHC	2 cut(s)	175, 889
SfaNI	GCATC	3 cut(s)	76, 322, 820
SinI	GGWCC	3 cut(s)	137, 302, 684
SmiMI	CAYNNNNRTG	2 cut(s)	233, 989
SmlI	CTYRAG	2 cut(s)	158, 241
SmoI	CTYRAG	2 cut(s)	158, 241
Sse9I	AATT	2 cut(s)	191, 912
SspMI	CTAG	1 cut(s)	618
StyI	CCWWGG	2 cut(s)	599, 897
TaaI	ACNGT	3 cut(s)	289, 479, 991
TaiI	ACGT	2 cut(s)	237, 642
TaqI	TCGA	1 cut(s)	318
TaqII	GACCGA	1 cut(s)	810
TasI	AATT	2 cut(s)	191, 912
TatI	WGTACW	1 cut(s)	487
TfiI	GAWTC	2 cut(s)	11, 902
Tru1I	TTAA	5 cut(s)	159, 258, 411, 824, 915
Tru9I	TTAA	5 cut(s)	159, 258, 411, 824, 915
TscAI	CASTG	3 cut(s)	81, 152, 996
TseFI	GTSAC	2 cut(s)	226, 235
Tsp45I	GTSAC	2 cut(s)	226, 235
TspDTI	ATGAA	2 cut(s)	437, 779
TspRI	CASTG	3 cut(s)	81, 152, 996
Vha464I	CTTAAG	1 cut(s)	158
VneI	GTGCAC	1 cut(s)	885
VpaK11BI	GGWCC	3 cut(s)	137, 302, 684
VspI	ATTAAT	2 cut(s)	411, 915
XapI	RAATTY	1 cut(s)	191
XceI	RCATGY	1 cut(s)	710
XspI	CTAG	1 cut(s)	618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.