pycom12g10800

Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0001343
Physical Location & Seq
Reverse (-)
12864567 .. 12865074
508 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g10800.3

Sequence Viewer

Length: 333 bp
ATGGTACATCGAGGCGCCGACAAGAACAGTGTAGCTGTAATTGCATTCCTATACCAAGTTGGTCCGCCCAATCCTTTTCTCTTAAAGGTGAACAAGGATATCCTGTCTATGATTGGAACAAAGGAGAAACAATTGGGAGTGATTAATCCAAGGGACATAATATGGCGCAGCTTAAGATTTCACAGATACATAGGATCGCTCACAACCCCTCCCTGTACGGAAGGAGTCATTTGGACAGTAAACGAAAGGGTAAATATTGTTTCAAGAGAACAACTGGAGTTACTTAAACAAGTTGTTGATGATGTAAGTCACCTTATCTGTTTAATTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00910 map00910
Pfam Domains
Protein Families
Carb_anhydrase

Protein Analysis

111

Amino Acids

12.48

Weight (kDa)

9.1

Isoelectric Point (pI)

27.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 14
AciI CCGC 1 cut(s) 65
AclWI GGATC 1 cut(s) 202
AcyI GRCGYC 1 cut(s) 15
AfaI GTAC 2 cut(s) 6, 217
AflII CTTAAG 1 cut(s) 172
AgsI TTSAA 1 cut(s) 264
AluBI AGCT 2 cut(s) 35, 171
AluI AGCT 2 cut(s) 35, 171
AlwI GGATC 1 cut(s) 202
ApeKI GCWGC 1 cut(s) 168
AseI ATTAAT 1 cut(s) 144
AspLEI GCGC 2 cut(s) 17, 168
AspS9I GGNCC 1 cut(s) 62
AsuHPI GGTGA 2 cut(s) 100, 302
AvaII GGWCC 1 cut(s) 62
BanI GGYRCC 1 cut(s) 14
BbvI GCAGC 1 cut(s) 180
BfoI RGCGCY 1 cut(s) 18
BfrI CTTAAG 1 cut(s) 172
BisI GCNGC 1 cut(s) 169
BlsI GCNGC 1 cut(s) 170
Bme18I GGWCC 1 cut(s) 62
BmgT120I GGNCC 1 cut(s) 62
BmiI GGNNCC 1 cut(s) 16
BpmI CTGGAG 1 cut(s) 296
BsaHI GRCGYC 1 cut(s) 15
BsaJI CCNNGG 1 cut(s) 149
BsaXI ACNNNNNCTCC 2 cut(s) 193, 223
Bse1I ACTGG 1 cut(s) 279
BseDI CCNNGG 1 cut(s) 149
BseNI ACTGG 1 cut(s) 279
BseXI GCAGC 1 cut(s) 180
BshNI GGYRCC 1 cut(s) 14
BslFI GGGAC 1 cut(s) 167
BsmFI GGGAC 1 cut(s) 167
BsmI GAATGC 1 cut(s) 44
Bsp143I GATC 1 cut(s) 194
BspACI CCGC 1 cut(s) 65
BspLI GGNNCC 1 cut(s) 16
BspPI GGATC 1 cut(s) 202
BspT107I GGYRCC 1 cut(s) 14
BspTI CTTAAG 1 cut(s) 172
BsrI ACTGG 1 cut(s) 279
BssECI CCNNGG 1 cut(s) 149
BssMI GATC 1 cut(s) 194
BssNI GRCGYC 1 cut(s) 15
BssT1I CCWWGG 1 cut(s) 149
Bst4CI ACNGT 2 cut(s) 29, 238
BstACI GRCGYC 1 cut(s) 15
BstAFI CTTAAG 1 cut(s) 172
BstH2I RGCGCY 1 cut(s) 18
BstHHI GCGC 2 cut(s) 17, 168
BstKTI GATC 1 cut(s) 197
BstMBI GATC 1 cut(s) 194
BstMWI GCNNNNNNNGC 1 cut(s) 41
BstV1I GCAGC 1 cut(s) 180
BtsIMutI CAGTG 1 cut(s) 34
CfoI GCGC 2 cut(s) 17, 168
Cfr13I GGNCC 1 cut(s) 62
Csp6I GTAC 2 cut(s) 5, 216
CviJI RGCY 2 cut(s) 35, 171
CviKI_1 RGCY 2 cut(s) 35, 171
CviQI GTAC 2 cut(s) 5, 216
DinI GGCGCC 1 cut(s) 16
DpnI GATC 1 cut(s) 196
DpnII GATC 1 cut(s) 194
EciI GGCGGA 1 cut(s) 54
Eco130I CCWWGG 1 cut(s) 149
Eco32I GATATC 1 cut(s) 100
Eco47I GGWCC 1 cut(s) 62
EcoRV GATATC 1 cut(s) 100
EcoT14I CCWWGG 1 cut(s) 149
EgeI GGCGCC 1 cut(s) 16
EheI GGCGCC 1 cut(s) 16
ErhI CCWWGG 1 cut(s) 149
FaiI YATR 5 cut(s) 52, 110, 158, 163, 191
FaqI GGGAC 1 cut(s) 167
Fnu4HI GCNGC 1 cut(s) 169
Fsp4HI GCNGC 1 cut(s) 169
GlaI GCGC 2 cut(s) 16, 167
GluI GCNGC 1 cut(s) 169
GsuI CTGGAG 1 cut(s) 296
HaeII RGCGCY 1 cut(s) 18
HhaI GCGC 2 cut(s) 17, 168
Hin1I GRCGYC 1 cut(s) 15
Hin6I GCGC 2 cut(s) 15, 166
HinP1I GCGC 2 cut(s) 15, 166
HinfI GANTC 1 cut(s) 225
HphI GGTGA 2 cut(s) 100, 302
Hpy166II GTNNAC 2 cut(s) 91, 241
Hpy188III TCNNGA 1 cut(s) 264
Hpy8I GTNNAC 2 cut(s) 91, 241
HpyAV CCTTC 1 cut(s) 215
HpyCH4III ACNGT 2 cut(s) 29, 238
HpyCH4V TGCA 1 cut(s) 44
HpyF10VI GCNNNNNNNGC 1 cut(s) 41
Hsp92I GRCGYC 1 cut(s) 15
HspAI GCGC 2 cut(s) 15, 166
KasI GGCGCC 1 cut(s) 14
Kzo9I GATC 1 cut(s) 194
LpnPI CCDG 3 cut(s) 116, 226, 260
Lsp1109I GCAGC 1 cut(s) 180
MaeIII GTNAC 2 cut(s) 279, 308
MalI GATC 1 cut(s) 196
MboI GATC 1 cut(s) 194
MfeI CAATTG 1 cut(s) 131
MluCI AATT 3 cut(s) 39, 131, 324
Mly113I GGCGCC 1 cut(s) 15
MlyI GAGTC 1 cut(s) 234
MnlI CCTC 2 cut(s) 5, 219
MseI TTAA 5 cut(s) 83, 144, 173, 285, 323
MspCI CTTAAG 1 cut(s) 172
MunI CAATTG 1 cut(s) 131
Mva1269I GAATGC 1 cut(s) 44
MwoI GCNNNNNNNGC 1 cut(s) 41
NarI GGCGCC 1 cut(s) 15
NdeII GATC 1 cut(s) 194
NlaIV GGNNCC 1 cut(s) 16
NmuCI GTSAC 1 cut(s) 308
PctI GAATGC 1 cut(s) 44
PkrI GCNGC 1 cut(s) 170
PleI GAGTC 1 cut(s) 233
PluTI GGCGCC 1 cut(s) 18
PpsI GAGTC 1 cut(s) 233
PshBI ATTAAT 1 cut(s) 144
PspN4I GGNNCC 1 cut(s) 16
PspPI GGNCC 1 cut(s) 62
RsaI GTAC 2 cut(s) 6, 217
RsaNI GTAC 2 cut(s) 5, 216
SaqAI TTAA 5 cut(s) 83, 144, 173, 285, 323
SatI GCNGC 1 cut(s) 169
Sau3AI GATC 1 cut(s) 194
Sau96I GGNCC 1 cut(s) 62
SchI GAGTC 1 cut(s) 234
SetI ASST 4 cut(s) 37, 90, 173, 315
SfoI GGCGCC 1 cut(s) 16
SinI GGWCC 1 cut(s) 62
SmlI CTYRAG 1 cut(s) 172
SmoI CTYRAG 1 cut(s) 172
Sse9I AATT 3 cut(s) 39, 131, 324
SsiI CCGC 1 cut(s) 65
SspDI GGCGCC 1 cut(s) 14
SspI AATATT 1 cut(s) 256
StyI CCWWGG 1 cut(s) 149
TaaI ACNGT 2 cut(s) 29, 238
TaqI TCGA 1 cut(s) 10
TasI AATT 3 cut(s) 39, 131, 324
Tru1I TTAA 5 cut(s) 83, 144, 173, 285, 323
Tru9I TTAA 5 cut(s) 83, 144, 173, 285, 323
TscAI CASTG 1 cut(s) 34
TseFI GTSAC 1 cut(s) 308
TseI GCWGC 1 cut(s) 168
Tsp45I GTSAC 1 cut(s) 308
TspGWI ACGGA 1 cut(s) 233
TspRI CASTG 1 cut(s) 34
Vha464I CTTAAG 1 cut(s) 172
VpaK11BI GGWCC 1 cut(s) 62
VspI ATTAAT 1 cut(s) 144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.