Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001343

Physical Location & Seq

Genomic Coordinates Reverse (-)

14785351 .. 14786715

Gene Structure 1365 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G126400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 864 bp

ATGGCTGGATCAAAGCAAATCCATCTTGGGTTACTTGTTTCTACATTTTTTCTTCTGTGCTGGAACCCGAAACCCGTTAGAGCTGAAAATTCTGAGAATGCAATAGAATTTGAATATAAGACAGGGAGCAAGAAAGGGCCAGAGCACTGGGGAGAGCTTAAGAAGGAATGGAAAACATGCAAGGATGGCAAATCACAATCACCAATAGATTTAATGGATGGGATTGCCACCAAAGTAAACTCAAGTTTAGAGCATTTTAAAGTCAGTTATAAGCCTGCCGAAGCCATGATCGAGAACGAAGGTCCTGTTATTGCGATTGTGTGGGAAGGTGATGCTGGATCAATTAGTATCAATGGCACAGATTACATCCTCAGACAATGCCATTGGCACTCACCCTCTGAGCATTCCATTAATGGCAAAAGGTATGATTTGGAATTGCACATGGTTCACAGAGCCAAGAACAACAATGTGGCTGTGGTTGGATTCCTCTACGAAATTGGCAAACCCAATCCGTTTCTCTCTGAGGTGACAAAGGAGATAGCATCTATGACTGATGTAAAGAAGAATGTACAACTGGGAGTGATTGATCCGATGAAGATGAAGGAGGCTCAGACAGGGTTTCAAGACGCGAAAAGGAGGAAGATGAGAGAGGATAGCTCGAAATTTTACAGATACATGGGCTCATTCACAACCCCTCCTTGCACTGAAGGAGTTACTTGGACCATAAACAAACAGGTACTTTCTGTTTCAAAATCACAAGTGAATCTTCTTCAACAAGTCGTTTTCGATTATGCAATGATGAATGCAAGACCACTACAACCTCTTTATGGCCGGGATATCAAGCTCCATGGCTCATCTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Carb_anhydrase

Protein Analysis

288

Amino Acids

32.45

Weight (kDa)

8.85

Isoelectric Point (pI)

42.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001343)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g16730 FvH4_6g16740 FvH4_6g16840 FvH4_6g16850
malus_domestica	MD04G1089400.v1.1 MD04G1089500.v1.1 MD12G1107800.v1.1 MD12G1108000.v1.1 MD12G1108100.v1.1
prunus_persica	Prupe.7G126200_v2.0.a1 Prupe.7G126300_v2.0.a1 Prupe.7G126400_v2.0.a1 Prupe.7G126500_v2.0.a1
pyrus_communis	pycom12g10780 pycom12g10800
rosa_chinensis	RchiOBHm_Chr3g0470661 RchiOBHm_Chr3g0470681 RchiOBHm_Chr3g0470851 RchiOBHm_Chr3g0470871
rosa_laevigata	RLG00000024238 RLG00000024240 RLG00000024248 RLG00000024249
rosa_multiflora	Rmu_co8349665.1_g000001 Rmu_sc0000867.1_g000003 Rmu_sc0002790.1_g000026
rosa_roxburghii	Rroxscaffold_6G00410460 Rroxscaffold_6G00410480 Rroxscaffold_6G00410610 Rroxscaffold_6G00410620
rosa_rugosa	Rorug03G0111500 Rorug03G0111600 Rorug03G0111600 Rorug03G0111700 Rorug03G0111900 Rorug03G0113200
rosa_samantha	Rh3AG161300 Rh3AG161600 Rh3BG185800 Rh3BG186100 Rh3BG188000 Rh3BG188200 Rh3CG176100 Rh3CG176500 Rh3CG178000 Rh3CG178200 Rh3DG187700 Rh3DG187800 Rh3DG189000 Rh3DG189100
rosa_wichuraiana	Rw0G004610 Rw3G015240 Rw3G015340 Rw3G015350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	270
AccII	CGCG	1 cut(s)	629
AclWI	GGATC	3 cut(s)	16, 346, 581
AcoI	YGGCCR	1 cut(s)	829
AcsI	RAATTY	3 cut(s)	88, 107, 662
AcuI	CTGAAG	1 cut(s)	726
AfaI	GTAC	2 cut(s)	570, 738
AfiI	CCNNNNNNNGG	1 cut(s)	827
AflII	CTTAAG	1 cut(s)	158
AgsI	TTSAA	4 cut(s)	113, 623, 750, 773
AluBI	AGCT	4 cut(s)	83, 157, 657, 844
AluI	AGCT	4 cut(s)	83, 157, 657, 844
Alw21I	GWGCWC	1 cut(s)	147
AlwI	GGATC	3 cut(s)	16, 346, 581
AoxI	GGCC	2 cut(s)	137, 829
ApoI	RAATTY	3 cut(s)	88, 107, 662
AseI	ATTAAT	1 cut(s)	411
AspS9I	GGNCC	3 cut(s)	137, 302, 720
AsuC2I	CCSGG	1 cut(s)	833
AsuHPI	GGTGA	4 cut(s)	192, 341, 384, 538
AvaII	GGWCC	2 cut(s)	302, 720
BanII	GRGCYC	1 cut(s)	683
Bbv12I	GWGCWC	1 cut(s)	147
BccI	CCATC	3 cut(s)	30, 179, 212
BcnI	CCSGG	1 cut(s)	833
BfrI	CTTAAG	1 cut(s)	158
Bme1390I	CCNGG	1 cut(s)	833
Bme18I	GGWCC	2 cut(s)	302, 720
BmgT120I	GGNCC	3 cut(s)	137, 302, 720
BmiI	GGNNCC	1 cut(s)	65
BmrFI	CCNGG	1 cut(s)	833
BmrI	ACTGGG	2 cut(s)	157, 584
BmsI	GCATC	2 cut(s)	322, 551
BmuI	ACTGGG	2 cut(s)	157, 584
BplI	GAGNNNNNCTC	2 cut(s)	641, 673
BpuEI	CTTGAG	1 cut(s)	226
BpuMI	CCSGG	1 cut(s)	833
BsaJI	CCNNGG	1 cut(s)	847
BsaXI	ACNNNNNCTCC	2 cut(s)	679, 709
Bsc4I	CCNNNNNNNGG	1 cut(s)	827
Bse1I	ACTGG	2 cut(s)	152, 579
Bse3DI	GCAATG	1 cut(s)	801
BseDI	CCNNGG	1 cut(s)	847
BseGI	GGATG	3 cut(s)	190, 223, 366
BseLI	CCNNNNNNNGG	1 cut(s)	827
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	5 cut(s)	84, 385, 390, 513, 623
BseNI	ACTGG	2 cut(s)	152, 579
Bsh1236I	CGCG	1 cut(s)	629
BshFI	GGCC	2 cut(s)	139, 831
BsiHKAI	GWGCWC	1 cut(s)	147
BsiSI	CCGG	1 cut(s)	832
BslI	CCNNNNNNNGG	1 cut(s)	827
BsmI	GAATGC	3 cut(s)	103, 403, 808
BsnI	GGCC	2 cut(s)	139, 831
Bsp1286I	GDGCHC	2 cut(s)	147, 683
Bsp1407I	TGTACA	1 cut(s)	568
Bsp143I	GATC	4 cut(s)	8, 288, 338, 586
Bsp19I	CCATGG	1 cut(s)	847
BspANI	GGCC	2 cut(s)	139, 831
BspCNI	CTCAG	5 cut(s)	85, 384, 391, 514, 622
BspFNI	CGCG	1 cut(s)	629
BspLI	GGNNCC	1 cut(s)	65
BspPI	GGATC	3 cut(s)	16, 346, 581
BspTI	CTTAAG	1 cut(s)	158
BsrDI	GCAATG	1 cut(s)	801
BsrGI	TGTACA	1 cut(s)	568
BsrI	ACTGG	2 cut(s)	152, 579
BssECI	CCNNGG	1 cut(s)	847
BssMI	GATC	4 cut(s)	8, 288, 338, 586
BssT1I	CCWWGG	1 cut(s)	847
BstAFI	CTTAAG	1 cut(s)	158
BstAUI	TGTACA	1 cut(s)	568
BstC8I	GCNNGC	1 cut(s)	276
BstDEI	CTNAG	5 cut(s)	93, 371, 399, 522, 609
BstDSI	CCRYGG	1 cut(s)	847
BstF5I	GGATG	3 cut(s)	190, 223, 366
BstFNI	CGCG	1 cut(s)	629
BstKTI	GATC	4 cut(s)	11, 291, 341, 589
BstMBI	GATC	4 cut(s)	8, 288, 338, 586
BstMWI	GCNNNNNNNGC	1 cut(s)	186
BstNSI	RCATGY	1 cut(s)	180
BstSCI	CCNGG	1 cut(s)	831
BstUI	CGCG	1 cut(s)	629
BstXI	CCANNNNNNTGG	1 cut(s)	147
BsuRI	GGCC	2 cut(s)	139, 831
BtgI	CCRYGG	1 cut(s)	847
BtsCI	GGATG	3 cut(s)	190, 223, 366
BtsIMutI	CAGTG	2 cut(s)	145, 702
Cac8I	GCNNGC	1 cut(s)	276
Cfr13I	GGNCC	3 cut(s)	137, 302, 720
CseI	GACGC	1 cut(s)	635
Csp6I	GTAC	2 cut(s)	569, 737
CviAII	CATG	5 cut(s)	177, 286, 442, 676, 848
CviQI	GTAC	2 cut(s)	569, 737
DdeI	CTNAG	5 cut(s)	93, 371, 399, 522, 609
DpnI	GATC	4 cut(s)	10, 290, 340, 588
DpnII	GATC	4 cut(s)	8, 288, 338, 586
DraI	TTTAAA	1 cut(s)	259
EaeI	YGGCCR	1 cut(s)	829
Eco130I	CCWWGG	1 cut(s)	847
Eco24I	GRGCYC	1 cut(s)	683
Eco32I	GATATC	1 cut(s)	838
Eco47I	GGWCC	2 cut(s)	302, 720
Eco57I	CTGAAG	1 cut(s)	726
EcoO109I	RGGNCCY	1 cut(s)	302
EcoRV	GATATC	1 cut(s)	838
EcoT14I	CCWWGG	1 cut(s)	847
EcoT38I	GRGCYC	1 cut(s)	683
ErhI	CCWWGG	1 cut(s)	847
FaeI	CATG	5 cut(s)	180, 289, 445, 679, 851
FalI	AAGNNNNNCTT	2 cut(s)	750, 782
FatI	CATG	5 cut(s)	176, 285, 441, 675, 847
FokI	GGATG	3 cut(s)	197, 230, 353
FriOI	GRGCYC	1 cut(s)	683
HaeIII	GGCC	2 cut(s)	139, 831
HapII	CCGG	1 cut(s)	832
HgaI	GACGC	1 cut(s)	635
Hin1II	CATG	5 cut(s)	180, 289, 445, 679, 851
HinfI	GANTC	2 cut(s)	483, 763
HpaII	CCGG	1 cut(s)	832
HphI	GGTGA	4 cut(s)	192, 341, 384, 538
Hpy166II	GTNNAC	2 cut(s)	238, 448
Hpy188I	TCNGA	7 cut(s)	94, 374, 400, 523, 591, 612, 863
Hpy188III	TCNNGA	2 cut(s)	292, 623
Hpy8I	GTNNAC	2 cut(s)	238, 448
HpyAV	CCTTC	5 cut(s)	157, 293, 320, 595, 701
HpyCH4V	TGCA	6 cut(s)	101, 180, 439, 702, 794, 806
HpyF10VI	GCNNNNNNNGC	1 cut(s)	186
HpyF3I	CTNAG	5 cut(s)	93, 371, 399, 522, 609
Hsp92II	CATG	5 cut(s)	180, 289, 445, 679, 851
Kzo9I	GATC	4 cut(s)	8, 288, 338, 586
LmnI	GCTCC	2 cut(s)	126, 849
LweI	GCATC	2 cut(s)	322, 551
MaeIII	GTNAC	3 cut(s)	30, 526, 712
MalI	GATC	4 cut(s)	10, 290, 340, 588
MboI	GATC	4 cut(s)	8, 288, 338, 586
MboII	GAAGA	6 cut(s)	44, 574, 607, 652, 758, 761
MhlI	GDGCHC	2 cut(s)	147, 683
MluCI	AATT	6 cut(s)	88, 107, 342, 434, 495, 662
MmeI	TCCRAC	1 cut(s)	460
MnlI	CCTC	9 cut(s)	380, 406, 497, 517, 598, 630, 643, 705, 831
MseI	TTAA	4 cut(s)	159, 212, 258, 411
MspCI	CTTAAG	1 cut(s)	158
MspI	CCGG	1 cut(s)	832
MspR9I	CCNGG	1 cut(s)	833
Mva1269I	GAATGC	3 cut(s)	103, 403, 808
MvnI	CGCG	1 cut(s)	629
MwoI	GCNNNNNNNGC	1 cut(s)	186
NciI	CCSGG	1 cut(s)	833
NcoI	CCATGG	1 cut(s)	847
NdeII	GATC	4 cut(s)	8, 288, 338, 586
NlaIII	CATG	5 cut(s)	180, 289, 445, 679, 851
NlaIV	GGNNCC	1 cut(s)	65
NmuCI	GTSAC	1 cut(s)	526
NspI	RCATGY	1 cut(s)	180
PctI	GAATGC	3 cut(s)	103, 403, 808
PfeI	GAWTC	2 cut(s)	483, 763
PpuMI	RGGWCCY	1 cut(s)	302
PshBI	ATTAAT	1 cut(s)	411
PsiI	TTATAA	1 cut(s)	270
Psp5II	RGGWCCY	1 cut(s)	302
PspN4I	GGNNCC	1 cut(s)	65
PspPI	GGNCC	3 cut(s)	137, 302, 720
PspPPI	RGGWCCY	1 cut(s)	302
RsaI	GTAC	2 cut(s)	570, 738
RsaNI	GTAC	2 cut(s)	569, 737
SaqAI	TTAA	4 cut(s)	159, 212, 258, 411
Sau3AI	GATC	4 cut(s)	8, 288, 338, 586
Sau96I	GGNCC	3 cut(s)	137, 302, 720
ScrFI	CCNGG	1 cut(s)	833
SduI	GDGCHC	2 cut(s)	147, 683
SfaNI	GCATC	2 cut(s)	322, 551
SinI	GGWCC	2 cut(s)	302, 720
SmlI	CTYRAG	2 cut(s)	158, 241
SmoI	CTYRAG	2 cut(s)	158, 241
Sse9I	AATT	6 cut(s)	88, 107, 342, 434, 495, 662
StyD4I	CCNGG	1 cut(s)	831
StyI	CCWWGG	1 cut(s)	847
TaqI	TCGA	3 cut(s)	291, 659, 786
TasI	AATT	6 cut(s)	88, 107, 342, 434, 495, 662
TatI	WGTACW	1 cut(s)	568
TfiI	GAWTC	2 cut(s)	483, 763
Tru1I	TTAA	4 cut(s)	159, 212, 258, 411
Tru9I	TTAA	4 cut(s)	159, 212, 258, 411
TscAI	CASTG	2 cut(s)	152, 709
TseFI	GTSAC	1 cut(s)	526
Tsp45I	GTSAC	1 cut(s)	526
TspDTI	ATGAA	3 cut(s)	608, 614, 815
TspGWI	ACGGA	1 cut(s)	501
TspRI	CASTG	2 cut(s)	152, 709
Vha464I	CTTAAG	1 cut(s)	158
VpaK11BI	GGWCC	2 cut(s)	302, 720
VspI	ATTAAT	1 cut(s)	411
XapI	RAATTY	3 cut(s)	88, 107, 662
XceI	RCATGY	1 cut(s)	180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.