Prupe.7G175600_v2.0.a1

Ankyrin repeat domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0001128
Physical Location & Seq
Forward (+)
17481601 .. 17484278
2678 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G175600.1

Sequence Viewer

Length: 1296 bp
ATGTCACTCTCTGTAAACCCCCAATCCTCTAAGCTTTTCTCTCTCCTCCCCGCCAAACCTCTCTCTCTCACCACCACACCTCACAAGCTCGCACCGCCCACAACCATAAAGTTTCAGAGAAAACTACACACACTCTTACCCTCTGTTAACTCTTCTTACTCCATTCAAAACGACTCTTTCGAAGAAGACCATGTAATCGGTGACTGCGTTGTCTTCGAAGAAGGCATATTCGACGACCCTTATCTCCAAAACAACACCAAAGTCGATACTTTTAACCCAACCAAAGCAAAACCCAGAAAAGCTATCGATGAAATTGGGTCTGAGAACTTGGTTCCGGACCAATGGAGAGAGGTACAAGCGGAGATTAACATAACGAAGAAAGAGAGGCGCAAGATAGCTCAAGAAGTGCAGTTTGGTACGAGGGTCGAGAAGCGGAAGAAGGGGTTAGAGCCCATAAGGGATTTGAATTTGGAGGAGTACTTGGCGTACAGAGAGGCCAAGTTGAATCAATTGAAGCCTCTTGTTTTGGATGACGCTTCAGGTTTGGCTCAGGTCGAGTATGCTAAAGCTAAGGAGTTGAAAGATAATGAAGGTAATGATGGGTCTTTGAGTGAGCGAGTGGCGCCTAAGAATCCAAGGTGGGCGGTTTATGGGAAGGGTCTGGAGGATGTTACTGAGTTCTTTAACAGTGAGCATTATGAGCCTGGTGCTAAGAAATCTGAAGGACCCCGAAAGTTGTTTACGAAAGAGGAGAAGGCTATGCTAAATAAGCGAAAACCTGATATAGCTGCTGCCACCTCTATCAAATGGCTACCACTTCACACTCTTGCTGCATCAGGAGAATTTTACCTTATGGATGCTTTATTGAAACATAATGCTGATATCAATGCTGTGGATAAGGATGGTTGGAATTCTCTTCGTAAAGCAATTCTTGGTAAAAATCAGGCCATCACGAACTATCTTTTAAGAGAATCAGCTAATCCGTTTATTCGTGATAAAGATGGCGCCACCTTGATGCATTATGCTGTCCGAACAGCTTCCAGTCAAGCAATTAAAATTCTTCTGTTATATAATGTTGAGATAAACCTTCAGGACAATGATGGATGGACACCATTACATCTAGCTGTTCAAGGCCGAAGAACAGATGTGGTGAGGCTTTTATTGATTAAAGGATCGGATAAGACATTGAAGAATAAGGATGGTTTAACCCCTCTTGACCTTTGCCTCTATTCTGGTCAAGAAACAAGGACTTACGAGCTAATTAAGCTGTTGAAGCTTCTTCCCAAGCCACGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
Ank_2 Ank_4 Ank_5 RRM_1

Protein Analysis

432

Amino Acids

48.7

Weight (kDa)

8.99

Isoelectric Point (pI)

35.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
AccB1I GGYRCC 2 cut(s) 622, 1004
AccIII TCCGGA 1 cut(s) 334
AciI CCGC 5 cut(s) 51, 95, 359, 433, 644
AclWI GGATC 1 cut(s) 1180
AcsI RAATTY 4 cut(s) 466, 842, 910, 1056
AcuI CTGAAG 3 cut(s) 522, 741, 1073
AcyI GRCGYC 2 cut(s) 623, 1005
AfaI GTAC 4 cut(s) 354, 418, 479, 488
AgsI TTSAA 9 cut(s) 167, 466, 505, 514, 580, 868, 1130, 1189, 1273
AjnI CCWGG 1 cut(s) 703
AjuI GAANNNNNNNTTGG 2 cut(s) 396, 428
AlwI GGATC 1 cut(s) 1180
Aor13HI TCCGGA 1 cut(s) 334
AoxI GGCC 3 cut(s) 495, 945, 1132
ApeKI GCWGC 3 cut(s) 788, 791, 830
ApoI RAATTY 4 cut(s) 466, 842, 910, 1056
Asp700I GAANNNNTTC 1 cut(s) 1036
AspLEI GCGC 3 cut(s) 390, 625, 1007
AspS9I GGNCC 2 cut(s) 337, 725
AsuHPI GGTGA 3 cut(s) 61, 212, 1162
AsuII TTCGAA 2 cut(s) 180, 216
AvaII GGWCC 2 cut(s) 337, 725
BaeI ACNNNNGTAYC 2 cut(s) 408, 441
BanI GGYRCC 2 cut(s) 622, 1004
BanII GRGCYC 1 cut(s) 453
BbsI GAAGAC 2 cut(s) 192, 205
BbvI GCAGC 3 cut(s) 775, 778, 817
BccI CCATC 7 cut(s) 593, 896, 956, 995, 1094, 1098, 1193
BciT130I CCWGG 1 cut(s) 705
BfaI CTAG 1 cut(s) 1121
BfoI RGCGCY 2 cut(s) 626, 1008
BisI GCNGC 3 cut(s) 789, 792, 831
BlsI GCNGC 3 cut(s) 790, 793, 832
BmcAI AGTACT 1 cut(s) 479
Bme1390I CCNGG 1 cut(s) 705
Bme18I GGWCC 2 cut(s) 337, 725
BmgT120I GGNCC 2 cut(s) 337, 725
BmiI GGNNCC 4 cut(s) 333, 624, 727, 1006
BmrFI CCNGG 1 cut(s) 705
BmsI GCATC 3 cut(s) 842, 847, 1005
BpiI GAAGAC 2 cut(s) 192, 205
BpmI CTGGAG 1 cut(s) 683
Bpu10I CCTNAGC 2 cut(s) 549, 570
Bpu14I TTCGAA 2 cut(s) 180, 216
BpuEI CTTGAG 1 cut(s) 384
Bsa29I ATCGAT 1 cut(s) 306
BsaHI GRCGYC 2 cut(s) 623, 1005
BsaJI CCNNGG 1 cut(s) 635
BsaWI WCCGGW 1 cut(s) 334
Bse1I ACTGG 1 cut(s) 1041
BseAI TCCGGA 1 cut(s) 334
BseBI CCWGG 1 cut(s) 705
BseCI ATCGAT 1 cut(s) 306
BseDI CCNNGG 1 cut(s) 635
BseGI GGATG 6 cut(s) 535, 673, 862, 907, 1109, 1204
BseMII CTCAG 3 cut(s) 312, 563, 666
BseNI ACTGG 1 cut(s) 1041
BseRI GAGGAG 3 cut(s) 35, 488, 764
BseXI GCAGC 3 cut(s) 775, 778, 817
BsgI GTGCAG 1 cut(s) 428
BshFI GGCC 3 cut(s) 497, 947, 1134
BshNI GGYRCC 2 cut(s) 622, 1004
BshVI ATCGAT 1 cut(s) 306
BsiSI CCGG 1 cut(s) 335
BsnI GGCC 3 cut(s) 497, 947, 1134
Bsp119I TTCGAA 2 cut(s) 180, 216
Bsp1286I GDGCHC 1 cut(s) 453
Bsp13I TCCGGA 1 cut(s) 334
Bsp143I GATC 1 cut(s) 1172
BspACI CCGC 5 cut(s) 51, 95, 359, 433, 644
BspANI GGCC 3 cut(s) 497, 947, 1134
BspCNI CTCAG 3 cut(s) 313, 562, 667
BspDI ATCGAT 1 cut(s) 306
BspEI TCCGGA 1 cut(s) 334
BspLI GGNNCC 4 cut(s) 333, 624, 727, 1006
BspPI GGATC 1 cut(s) 1180
BspT104I TTCGAA 2 cut(s) 180, 216
BspT107I GGYRCC 2 cut(s) 622, 1004
BsrI ACTGG 1 cut(s) 1041
BssECI CCNNGG 1 cut(s) 635
BssMI GATC 1 cut(s) 1172
BssNI GRCGYC 2 cut(s) 623, 1005
BssT1I CCWWGG 1 cut(s) 635
Bst2UI CCWGG 1 cut(s) 705
Bst4CI ACNGT 1 cut(s) 689
Bst6I CTCTTC 2 cut(s) 157, 921
BstACI GRCGYC 2 cut(s) 623, 1005
BstBI TTCGAA 2 cut(s) 180, 216
BstC8I GCNNGC 1 cut(s) 90
BstDEI CTNAG 7 cut(s) 30, 321, 549, 570, 627, 675, 711
BstF5I GGATG 6 cut(s) 535, 673, 862, 907, 1109, 1204
BstH2I RGCGCY 2 cut(s) 626, 1008
BstHHI GCGC 3 cut(s) 390, 625, 1007
BstKTI GATC 1 cut(s) 1175
BstMBI GATC 1 cut(s) 1172
BstMWI GCNNNNNNNGC 6 cut(s) 94, 622, 700, 769, 1264, 1273
BstNI CCWGG 1 cut(s) 705
BstSCI CCNGG 1 cut(s) 703
BstV1I GCAGC 3 cut(s) 775, 778, 817
BstV2I GAAGAC 2 cut(s) 192, 205
Bsu15I ATCGAT 1 cut(s) 306
BsuRI GGCC 3 cut(s) 497, 947, 1134
BsuTUI ATCGAT 1 cut(s) 306
BtsCI GGATG 6 cut(s) 535, 673, 862, 907, 1109, 1204
BtsIMutI CAGTG 1 cut(s) 694
Cac8I GCNNGC 1 cut(s) 90
CfoI GCGC 3 cut(s) 390, 625, 1007
Cfr13I GGNCC 2 cut(s) 337, 725
ClaI ATCGAT 1 cut(s) 306
CseI GACGC 1 cut(s) 542
Csp6I GTAC 4 cut(s) 353, 417, 478, 487
CviAII CATG 1 cut(s) 191
CviQI GTAC 4 cut(s) 353, 417, 478, 487
DdeI CTNAG 7 cut(s) 30, 321, 549, 570, 627, 675, 711
DinI GGCGCC 2 cut(s) 624, 1006
DpnI GATC 1 cut(s) 1174
DpnII GATC 1 cut(s) 1172
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
Eam1104I CTCTTC 2 cut(s) 157, 921
EarI CTCTTC 2 cut(s) 157, 921
Eco130I CCWWGG 1 cut(s) 635
Eco24I GRGCYC 1 cut(s) 453
Eco32I GATATC 1 cut(s) 883
Eco47I GGWCC 2 cut(s) 337, 725
Eco57I CTGAAG 3 cut(s) 522, 741, 1073
EcoO109I RGGNCCY 1 cut(s) 725
EcoRI GAATTC 1 cut(s) 910
EcoRII CCWGG 1 cut(s) 703
EcoRV GATATC 1 cut(s) 883
EcoT14I CCWWGG 1 cut(s) 635
EcoT22I ATGCAT 1 cut(s) 1020
EcoT38I GRGCYC 1 cut(s) 453
EgeI GGCGCC 2 cut(s) 624, 1006
EheI GGCGCC 2 cut(s) 624, 1006
ErhI CCWWGG 1 cut(s) 635
FaeI CATG 1 cut(s) 194
FalI AAGNNNNNCTT 2 cut(s) 915, 947
FatI CATG 1 cut(s) 190
FauI CCCGC 1 cut(s) 58
Fnu4HI GCNGC 3 cut(s) 789, 792, 831
FokI GGATG 6 cut(s) 542, 680, 869, 914, 1116, 1211
FriOI GRGCYC 1 cut(s) 453
Fsp4HI GCNGC 3 cut(s) 789, 792, 831
FspBI CTAG 1 cut(s) 1121
GlaI GCGC 3 cut(s) 389, 624, 1006
GluI GCNGC 3 cut(s) 789, 792, 831
GsuI CTGGAG 1 cut(s) 683
HaeII RGCGCY 2 cut(s) 626, 1008
HaeIII GGCC 3 cut(s) 497, 947, 1134
HapII CCGG 1 cut(s) 335
HgaI GACGC 1 cut(s) 542
HhaI GCGC 3 cut(s) 390, 625, 1007
Hin1I GRCGYC 2 cut(s) 623, 1005
Hin1II CATG 1 cut(s) 194
Hin6I GCGC 3 cut(s) 388, 623, 1005
HinP1I GCGC 3 cut(s) 388, 623, 1005
HincII GTYRAC 1 cut(s) 148
HindII GTYRAC 1 cut(s) 148
HindIII AAGCTT 2 cut(s) 32, 1274
HinfI GANTC 4 cut(s) 173, 505, 631, 971
HpaI GTTAAC 1 cut(s) 148
HpaII CCGG 1 cut(s) 335
HphI GGTGA 3 cut(s) 61, 212, 1162
Hpy166II GTNNAC 3 cut(s) 16, 148, 741
Hpy188I TCNGA 5 cut(s) 117, 322, 721, 1031, 1177
Hpy8I GTNNAC 3 cut(s) 16, 148, 741
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 7 cut(s) 215, 433, 584, 649, 716, 748, 1097
HpyCH4III ACNGT 1 cut(s) 689
HpyCH4V TGCA 3 cut(s) 409, 833, 1018
HpyF10VI GCNNNNNNNGC 6 cut(s) 94, 622, 700, 769, 1264, 1273
HpyF3I CTNAG 7 cut(s) 30, 321, 549, 570, 627, 675, 711
Hsp92I GRCGYC 2 cut(s) 623, 1005
Hsp92II CATG 1 cut(s) 194
HspAI GCGC 3 cut(s) 388, 623, 1005
KasI GGCGCC 2 cut(s) 622, 1004
Kpn2I TCCGGA 1 cut(s) 334
KspAI GTTAAC 1 cut(s) 148
Kzo9I GATC 1 cut(s) 1172
Lsp1109I GCAGC 3 cut(s) 775, 778, 817
LweI GCATC 3 cut(s) 842, 847, 1005
MaeI CTAG 1 cut(s) 1121
MaeIII GTNAC 3 cut(s) 3, 200, 670
MalI GATC 1 cut(s) 1174
MboI GATC 1 cut(s) 1172
MfeI CAATTG 1 cut(s) 509
MhlI GDGCHC 1 cut(s) 453
MluCI AATT 9 cut(s) 312, 466, 509, 842, 910, 927, 1050, 1056, 1260
Mly113I GGCGCC 2 cut(s) 623, 1005
MlyI GAGTC 1 cut(s) 167
MmeI TCCRAC 1 cut(s) 887
Mph1103I ATGCAT 1 cut(s) 1020
MroI TCCGGA 1 cut(s) 334
MroXI GAANNNNTTC 1 cut(s) 1036
MseI TTAA 9 cut(s) 147, 273, 366, 684, 965, 1053, 1167, 1205, 1263
MslI CAYNNNNRTG 1 cut(s) 1013
MspI CCGG 1 cut(s) 335
MspR9I CCNGG 1 cut(s) 705
MunI CAATTG 1 cut(s) 509
MvaI CCWGG 1 cut(s) 705
MwoI GCNNNNNNNGC 6 cut(s) 94, 622, 700, 769, 1264, 1273
NarI GGCGCC 2 cut(s) 623, 1005
NdeII GATC 1 cut(s) 1172
NlaIII CATG 1 cut(s) 194
NlaIV GGNNCC 4 cut(s) 333, 624, 727, 1006
NmuCI GTSAC 2 cut(s) 3, 200
NsiI ATGCAT 1 cut(s) 1020
NspV TTCGAA 2 cut(s) 180, 216
PcsI WCGNNNNNNNCGW 2 cut(s) 177, 204
PdmI GAANNNNTTC 1 cut(s) 1036
PfeI GAWTC 3 cut(s) 505, 631, 971
PkrI GCNGC 3 cut(s) 790, 793, 832
PleI GAGTC 1 cut(s) 167
PluTI GGCGCC 2 cut(s) 626, 1008
PpsI GAGTC 1 cut(s) 167
PpuMI RGGWCCY 1 cut(s) 725
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 1 cut(s) 703
PspGI CCWGG 1 cut(s) 703
PspN4I GGNNCC 4 cut(s) 333, 624, 727, 1006
PspPI GGNCC 2 cut(s) 337, 725
PspPPI RGGWCCY 1 cut(s) 725
RsaI GTAC 4 cut(s) 354, 418, 479, 488
RsaNI GTAC 4 cut(s) 353, 417, 478, 487
RseI CAYNNNNRTG 1 cut(s) 1013
SaqAI TTAA 9 cut(s) 147, 273, 366, 684, 965, 1053, 1167, 1205, 1263
SatI GCNGC 3 cut(s) 789, 792, 831
Sau3AI GATC 1 cut(s) 1172
Sau96I GGNCC 2 cut(s) 337, 725
ScaI AGTACT 1 cut(s) 479
SchI GAGTC 1 cut(s) 167
ScrFI CCNGG 1 cut(s) 705
SduI GDGCHC 1 cut(s) 453
SfaNI GCATC 3 cut(s) 842, 847, 1005
SfoI GGCGCC 2 cut(s) 624, 1006
SfuI TTCGAA 2 cut(s) 180, 216
SinI GGWCC 2 cut(s) 337, 725
SmiMI CAYNNNNRTG 1 cut(s) 1013
SmlI CTYRAG 1 cut(s) 399
SmoI CTYRAG 1 cut(s) 399
Sse9I AATT 9 cut(s) 312, 466, 509, 842, 910, 927, 1050, 1056, 1260
SsiI CCGC 5 cut(s) 51, 95, 359, 433, 644
SspDI GGCGCC 2 cut(s) 622, 1004
SspMI CTAG 1 cut(s) 1121
StyD4I CCNGG 1 cut(s) 703
StyI CCWWGG 1 cut(s) 635
TaaI ACNGT 1 cut(s) 689
TaqI TCGA 7 cut(s) 180, 216, 231, 264, 306, 426, 555
TasI AATT 9 cut(s) 312, 466, 509, 842, 910, 927, 1050, 1056, 1260
TatI WGTACW 1 cut(s) 477
TfiI GAWTC 3 cut(s) 505, 631, 971
Tru1I TTAA 9 cut(s) 147, 273, 366, 684, 965, 1053, 1167, 1205, 1263
Tru9I TTAA 9 cut(s) 147, 273, 366, 684, 965, 1053, 1167, 1205, 1263
TscAI CASTG 1 cut(s) 694
TseFI GTSAC 2 cut(s) 3, 200
TseI GCWGC 3 cut(s) 788, 791, 830
Tsp45I GTSAC 2 cut(s) 3, 200
TspDTI ATGAA 2 cut(s) 324, 603
TspGWI ACGGA 1 cut(s) 972
TspRI CASTG 1 cut(s) 694
VpaK11BI GGWCC 2 cut(s) 337, 725
XapI RAATTY 4 cut(s) 466, 842, 910, 1056
XmnI GAANNNNTTC 1 cut(s) 1036
XspI CTAG 1 cut(s) 1121
ZrmI AGTACT 1 cut(s) 479
Zsp2I ATGCAT 1 cut(s) 1020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.