Rw2G009310

Ankyrin repeat domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0001128
Physical Location & Seq
Reverse (-)
9337719 .. 9343540
5822 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G009310.1

Sequence Viewer

Length: 1932 bp
ATGGCGGATTCTCCTCGCAGAAGGTATTCACGATCCCCTTCTCCATGGAGAGCTCAGTCTCGGTCCAGGTCCAGGTCTATGTCCAGGCCTAGGTCAAGATCAAGATCCTGGTCTAGGCCGAGGCACAGGTCTAGAAGTCGTGGCAGGTCAAGATCCAGAAGTCGTGGAAGGGATGCTGTTGTAAATCCTGGAAATACACTCTATGTAACTGGCCTATCTCAAAGGGTCTCTGAAAAGGACGTTGAAAGGCACTTTTCAAAGGAGGGAAAGGTAGCTTCATGTTTTCTTGTTGTTGAACCTCGTTCGCGAATTTCCCGTGGTTTTGCCTTCGTTACAATGGATTCTAATGAAGATGCAGAACGGTGCATTAAACATCTCAACCAGTCAGTTCTGGAAGGGCGATACATAACTGTGGAAAGGTCCCGGAGGAAGCGACCAAGGACTCCGACACCTGGGCATTATCTCGGATTGAAAAATACTAGGGACTATGCCCGTGGTGACCGTGACCGTGACCGTGATCGTGGGAGGTACTGTGGGGGCTCAGGTCGAGATGACTATGGATATAGGAGGTCTCCTAGACGCTCACCCTACAGAGGTGGTCGCGATTATTCTCCTAGGGGCTCATCTTATGGTGGTGGAAGATCAAGAAGGGAGAGCCACTGCAGAAAAAACCATGTCACTCTCTTCAGCTCTAAACCCCCAACCTCGAAGCTCTTCTCTCTCCTCCCCACGCCATCTCTCTCTTTCACACCCCACAAGCTCTCACCACCCACCACCCTGAAATTCTCATCCAAACTCCACACCCTCTCACCCTCCTTCAACTCCTCTCACTCCACCTTCGAAGAAGACCACGTCATCGGCGACTGCGTCGTCTTCGAAGAGGGCGTGTTCGACGACCCGTATCTTCAAAACGACACCGAAATCGAACATTTCAACCCGGAAAAGCCGAGGCCCAGAAAACGCGTTGAAATTGAGACCGAGAATTTGGTGCCGGAGAAATGGAAGGAGGTGCAGGCCACAGTGAACATAACAAAGAAAGAGAGGAGGAAGATTGCGCAGGAGTTGGAGTTCGGTTCGAGGGTCGACAAGAACAAGAGGGGGTTGGAGCCCATAAGGAATTTGAATTTGGAGGAGTACAAGGCGTATAGAGAGGCCAAGTTGAACCAGCTGAGGCCACTGGTTTTGGATAGGCCTGGGAAGTTTAAGGAGGAGGATGAAGAGTGTGAAGGTGGTGATGGGTTTGTGAGTGAGAGAGTGGCGCCTAAGAATCCCAGGTGGGCTGTTTATGGGAAGGGTTTGGAGGATGTTACTGAGTTTTTTAACAGTGGCCATTATGAGCCTGGTGTGAAGATATCTGAAGGACCCCGGCCTTTGTTTACGAAAGAGGAAAAGCTGATGCTGAATAGGCGAAAACCGGATATAGCTGCTGCCACTTCTAGTAAATGGCTTCCCCTTCACACTCTTGCCGCATCAGGAGAATATTACCTTATGGACGCTTTATTGAAACATGAAGCTGATATCAATGCTGTGGATAAGGATGATTGGACTGTTCTTCACAAAGCAATTATTGGTAAAAACCAGGCCATTACAAACTATCTTCTCAGAGAATCGGCTAATCCATTTGTTCGTGATAAAGATGGTGCTACCTTGATGCATTATGCTGTCCGGACAGCTTCAAGTCAAGCAATTAAGATTCTTCTGTTATACAACGTTGATATAAACCTTCAGGACAATGATGGGTGGACGCCCTTACATCTAGCTGTTCAAGGCCGAAGAACAGATGTAGTGAGGCTTTTGTTGATTAAAGGCGCGGATAAGACATTGAAAAACAAGGATGGATTGACCCCTCTTGAGCTTTGCCTCTATTCTGGCCGAGACACGAGGACTTACGAGCTGATTAAGCTATTGAAGCTTCTTCCCAAAACCCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
Ank_2 Ank_4 Ank_5 RRM_1

Protein Analysis

643

Amino Acids

73.85

Weight (kDa)

9.95

Isoelectric Point (pI)

61.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 67 - 136 2.8e-15 RNA recognition motif
Ank_2 PF12796 477 - 543 2.9e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 485 - 577 2.7e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 485 - 534 4.2e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 500 - 554 7.6e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 528 - 610 1.3e-16 Ankyrin repeats (3 copies)
Ank_5 PF13857 536 - 587 4.3e-10 Ankyrin repeats (many copies)
Ank_2 PF12796 551 - 625 6.4e-14 Ankyrin repeats (3 copies)
Ank_4 PF13637 562 - 600 2.9e-07 Ankyrin repeats (many copies)
Ank PF00023 579 - 611 6.8e-08 Ankyrin repeat
Ank_5 PF13857 582 - 620 1.3e-06 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 869
Acc16I TGCGCA 1 cut(s) 1056
Acc36I ACCTGC 1 cut(s) 135
AccB1I GGYRCC 2 cut(s) 988, 1258
AccI GTMKAC 1 cut(s) 1083
AccII CGCG 4 cut(s) 307, 603, 963, 1811
AccIII TCCGGA 1 cut(s) 1665
AciI CCGC 3 cut(s) 5, 1467, 1811
AclI AACGTT 1 cut(s) 1710
AclWI GGATC 3 cut(s) 27, 99, 147
AcoI YGGCCR 2 cut(s) 1327, 1870
AcsI RAATTY 5 cut(s) 309, 782, 982, 1117, 1123
AcuI CTGAAG 3 cut(s) 670, 1377, 1709
AcyI GRCGYC 2 cut(s) 1259, 1745
AfaI GTAC 2 cut(s) 530, 1136
AfiI CCNNNNNNNGG 5 cut(s) 72, 90, 114, 452, 593
AflIII ACRYGT 1 cut(s) 961
AjiI CACGTC 1 cut(s) 853
AjuI GAANNNNNNNTTGG 2 cut(s) 1109, 1141
AloI GAACNNNNNNTCC 2 cut(s) 1052, 1084
Alw21I GWGCWC 1 cut(s) 55
Alw26I GTCTC 5 cut(s) 63, 232, 576, 968, 1869
AlwI GGATC 3 cut(s) 27, 99, 147
Aor13HI TCCGGA 1 cut(s) 1665
ApeKI GCWGC 2 cut(s) 1424, 1427
ApoI RAATTY 5 cut(s) 309, 782, 982, 1117, 1123
ArsI GACNNNNNNTTYG 2 cut(s) 967, 999
Asp700I GAANNNNTTC 2 cut(s) 25, 713
AspA2I CCTAGG 2 cut(s) 89, 614
AspLEI GCGC 3 cut(s) 1057, 1261, 1811
AspS9I GGNCC 5 cut(s) 63, 69, 420, 951, 1361
AsuC2I CCSGG 3 cut(s) 424, 938, 1366
AsuHPI GGTGA 5 cut(s) 509, 576, 756, 801, 1244
AsuII TTCGAA 2 cut(s) 840, 876
AvaII GGWCC 4 cut(s) 63, 69, 420, 1361
AvrII CCTAGG 2 cut(s) 89, 614
BalI TGGCCA 1 cut(s) 1329
BanI GGYRCC 2 cut(s) 988, 1258
BanII GRGCYC 4 cut(s) 55, 542, 623, 1110
BauI CACGAG 1 cut(s) 1879
BbsI GAAGAC 2 cut(s) 852, 865
Bbv12I GWGCWC 1 cut(s) 55
BbvCI CCTCAGC 1 cut(s) 1169
BbvI GCAGC 2 cut(s) 1411, 1414
BccI CCATC 5 cut(s) 742, 1229, 1631, 1730, 1829
BcnI CCSGG 3 cut(s) 424, 938, 1366
BcoDI GTCTC 5 cut(s) 63, 232, 576, 968, 1869
BfaI CTAG 8 cut(s) 90, 114, 132, 480, 576, 615, 1437, 1757
BfmI CTRYAG 2 cut(s) 589, 661
BfoI RGCGCY 1 cut(s) 1262
BfuAI ACCTGC 1 cut(s) 135
BisI GCNGC 3 cut(s) 1425, 1428, 1467
BlnI CCTAGG 2 cut(s) 89, 614
BlsI GCNGC 3 cut(s) 1426, 1429, 1468
Bme18I GGWCC 4 cut(s) 63, 69, 420, 1361
BmgBI CACGTC 1 cut(s) 853
BmgT120I GGNCC 5 cut(s) 63, 69, 420, 951, 1361
BmiI GGNNCC 5 cut(s) 422, 990, 1107, 1260, 1363
BmsI GCATC 5 cut(s) 163, 343, 1386, 1478, 1641
BpiI GAAGAC 2 cut(s) 852, 865
Bpu10I CCTNAGC 2 cut(s) 541, 1169
Bpu14I TTCGAA 2 cut(s) 840, 876
BpuEI CTTGAG 1 cut(s) 1871
BpuMI CCSGG 3 cut(s) 424, 938, 1366
BsaBI GATNNNNATC 1 cut(s) 103
BsaHI GRCGYC 2 cut(s) 1259, 1745
BsaI GGTCTC 3 cut(s) 232, 576, 968
BsaWI WCCGGW 2 cut(s) 1414, 1665
BsaXI ACNNNNNCTCC 4 cut(s) 517, 547, 1052, 1082
Bsc4I CCNNNNNNNGG 5 cut(s) 72, 90, 114, 452, 593
Bse1I ACTGG 3 cut(s) 214, 382, 1182
Bse8I GATNNNNATC 1 cut(s) 103
BseAI TCCGGA 1 cut(s) 1665
BseGI GGATG 6 cut(s) 178, 788, 1219, 1309, 1543, 1840
BseJI GATNNNNATC 1 cut(s) 103
BseLI CCNNNNNNNGG 5 cut(s) 72, 90, 114, 452, 593
BseMII CTCAG 5 cut(s) 68, 555, 1160, 1302, 1615
BseNI ACTGG 3 cut(s) 214, 382, 1182
BseRI GAGGAG 5 cut(s) 713, 814, 1057, 1145, 1223
BseXI GCAGC 2 cut(s) 1411, 1414
BsgI GTGCAG 1 cut(s) 1031
Bsh1236I CGCG 4 cut(s) 307, 603, 963, 1811
BshNI GGYRCC 2 cut(s) 988, 1258
BsiHKAI GWGCWC 1 cut(s) 55
BsiSI CCGG 6 cut(s) 424, 938, 992, 1366, 1415, 1666
BslFI GGGAC 2 cut(s) 406, 497
BslI CCNNNNNNNGG 5 cut(s) 72, 90, 114, 452, 593
BsmAI GTCTC 5 cut(s) 63, 232, 576, 968, 1869
BsmFI GGGAC 2 cut(s) 406, 497
Bso31I GGTCTC 3 cut(s) 232, 576, 968
Bsp119I TTCGAA 2 cut(s) 840, 876
Bsp1286I GDGCHC 4 cut(s) 55, 542, 623, 1110
Bsp13I TCCGGA 1 cut(s) 1665
Bsp143I GATC 6 cut(s) 32, 98, 104, 152, 517, 641
Bsp19I CCATGG 1 cut(s) 44
Bsp68I TCGCGA 2 cut(s) 307, 603
BspACI CCGC 3 cut(s) 5, 1467, 1811
BspCNI CTCAG 5 cut(s) 67, 554, 1161, 1303, 1614
BspEI TCCGGA 1 cut(s) 1665
BspFNI CGCG 4 cut(s) 307, 603, 963, 1811
BspLI GGNNCC 5 cut(s) 422, 990, 1107, 1260, 1363
BspMAI CTGCAG 1 cut(s) 665
BspMI ACCTGC 1 cut(s) 135
BspPI GGATC 3 cut(s) 27, 99, 147
BspQI GCTCTTC 1 cut(s) 719
BspT104I TTCGAA 2 cut(s) 840, 876
BspT107I GGYRCC 2 cut(s) 988, 1258
BspTNI GGTCTC 3 cut(s) 232, 576, 968
BsrI ACTGG 3 cut(s) 214, 382, 1182
BssMI GATC 6 cut(s) 32, 98, 104, 152, 517, 641
BssNI GRCGYC 2 cut(s) 1259, 1745
BssSI CACGAG 1 cut(s) 1879
BssT1I CCWWGG 4 cut(s) 44, 89, 437, 614
Bst2BI CACGAG 1 cut(s) 1879
Bst4CI ACNGT 9 cut(s) 363, 412, 503, 509, 515, 533, 1021, 1325, 1549
Bst6I CTCTTC 4 cut(s) 689, 719, 873, 1212
BstACI GRCGYC 2 cut(s) 1259, 1745
BstBI TTCGAA 2 cut(s) 840, 876
BstC8I GCNNGC 1 cut(s) 1014
BstDEI CTNAG 6 cut(s) 54, 541, 1169, 1263, 1311, 1601
BstDSI CCRYGG 3 cut(s) 44, 316, 493
BstEII GGTNACC 1 cut(s) 497
BstENI CCTNNNNNAGG 1 cut(s) 112
BstF5I GGATG 6 cut(s) 178, 788, 1219, 1309, 1543, 1840
BstFNI CGCG 4 cut(s) 307, 603, 963, 1811
BstH2I RGCGCY 1 cut(s) 1262
BstHHI GCGC 3 cut(s) 1057, 1261, 1811
BstKTI GATC 6 cut(s) 35, 101, 107, 155, 520, 644
BstMAI GTCTC 5 cut(s) 63, 232, 576, 968, 1869
BstMBI GATC 6 cut(s) 32, 98, 104, 152, 517, 641
BstMWI GCNNNNNNNGC 3 cut(s) 1405, 1900, 1909
BstPI GGTNACC 1 cut(s) 497
BstSFI CTRYAG 2 cut(s) 589, 661
BstUI CGCG 4 cut(s) 307, 603, 963, 1811
BstV1I GCAGC 2 cut(s) 1411, 1414
BstV2I GAAGAC 2 cut(s) 852, 865
BstX2I RGATCY 2 cut(s) 104, 152
BstYI RGATCY 2 cut(s) 104, 152
BtgI CCRYGG 3 cut(s) 44, 316, 493
BtrI CACGTC 1 cut(s) 853
BtsCI GGATG 6 cut(s) 178, 788, 1219, 1309, 1543, 1840
BtsI GCAGTG 1 cut(s) 658
BtsIMutI CAGTG 4 cut(s) 658, 1026, 1175, 1330
BtuMI TCGCGA 2 cut(s) 307, 603
BveI ACCTGC 1 cut(s) 135
Cac8I GCNNGC 1 cut(s) 1014
CfoI GCGC 3 cut(s) 1057, 1261, 1811
Cfr13I GGNCC 5 cut(s) 63, 69, 420, 951, 1361
CseI GACGC 4 cut(s) 588, 856, 1502, 1753
Csp6I GTAC 2 cut(s) 529, 1135
CspCI CAANNNNNGTGG 2 cut(s) 1164, 1199
CviAII CATG 4 cut(s) 45, 279, 674, 1508
CviQI GTAC 2 cut(s) 529, 1135
DdeI CTNAG 6 cut(s) 54, 541, 1169, 1263, 1311, 1601
DinI GGCGCC 1 cut(s) 1260
DpnI GATC 6 cut(s) 34, 100, 106, 154, 519, 643
DpnII GATC 6 cut(s) 32, 98, 104, 152, 517, 641
DrdI GACNNNNNNGTC 1 cut(s) 869
DseDI GACNNNNNNGTC 1 cut(s) 869
EaeI YGGCCR 2 cut(s) 1327, 1870
Eam1104I CTCTTC 4 cut(s) 689, 719, 873, 1212
EarI CTCTTC 4 cut(s) 689, 719, 873, 1212
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 53
Eco130I CCWWGG 4 cut(s) 44, 89, 437, 614
Eco147I AGGCCT 2 cut(s) 88, 1192
Eco24I GRGCYC 4 cut(s) 55, 542, 623, 1110
Eco31I GGTCTC 3 cut(s) 232, 576, 968
Eco32I GATATC 2 cut(s) 1353, 1519
Eco47I GGWCC 4 cut(s) 63, 69, 420, 1361
Eco53kI GAGCTC 1 cut(s) 53
Eco57I CTGAAG 3 cut(s) 670, 1377, 1709
Eco91I GGTNACC 1 cut(s) 497
EcoICRI GAGCTC 1 cut(s) 53
EcoNI CCTNNNNNAGG 1 cut(s) 112
EcoO109I RGGNCCY 2 cut(s) 420, 1361
EcoO65I GGTNACC 1 cut(s) 497
EcoRV GATATC 2 cut(s) 1353, 1519
EcoT14I CCWWGG 4 cut(s) 44, 89, 437, 614
EcoT22I ATGCAT 1 cut(s) 1656
EcoT38I GRGCYC 4 cut(s) 55, 542, 623, 1110
EgeI GGCGCC 1 cut(s) 1260
EheI GGCGCC 1 cut(s) 1260
ErhI CCWWGG 4 cut(s) 44, 89, 437, 614
FaeI CATG 4 cut(s) 48, 282, 677, 1511
FaqI GGGAC 2 cut(s) 406, 497
FatI CATG 4 cut(s) 44, 278, 673, 1507
FblI GTMKAC 1 cut(s) 1083
Fnu4HI GCNGC 3 cut(s) 1425, 1428, 1467
FokI GGATG 6 cut(s) 185, 775, 1226, 1316, 1550, 1847
FriOI GRGCYC 4 cut(s) 55, 542, 623, 1110
Fsp4HI GCNGC 3 cut(s) 1425, 1428, 1467
FspBI CTAG 8 cut(s) 90, 114, 132, 480, 576, 615, 1437, 1757
FspI TGCGCA 1 cut(s) 1056
GlaI GCGC 3 cut(s) 1056, 1260, 1810
GluI GCNGC 3 cut(s) 1425, 1428, 1467
HaeII RGCGCY 1 cut(s) 1262
HapII CCGG 6 cut(s) 424, 938, 992, 1366, 1415, 1666
HgaI GACGC 4 cut(s) 588, 856, 1502, 1753
HhaI GCGC 3 cut(s) 1057, 1261, 1811
Hin1I GRCGYC 2 cut(s) 1259, 1745
Hin1II CATG 4 cut(s) 48, 282, 677, 1511
Hin6I GCGC 3 cut(s) 1055, 1259, 1809
HinP1I GCGC 3 cut(s) 1055, 1259, 1809
HincII GTYRAC 1 cut(s) 1084
HindII GTYRAC 1 cut(s) 1084
HindIII AAGCTT 1 cut(s) 1910
HinfI GANTC 6 cut(s) 8, 341, 442, 1267, 1607, 1693
HpaII CCGG 6 cut(s) 424, 938, 992, 1366, 1415, 1666
HphI GGTGA 5 cut(s) 509, 576, 756, 801, 1244
Hpy166II GTNNAC 4 cut(s) 1024, 1084, 1377, 1743
Hpy188I TCNGA 5 cut(s) 232, 447, 467, 1357, 1604
Hpy8I GTNNAC 4 cut(s) 1024, 1084, 1377, 1743
Hpy99I CGWCG 2 cut(s) 872, 896
HpyCH4III ACNGT 9 cut(s) 363, 412, 503, 509, 515, 533, 1021, 1325, 1549
HpyCH4IV ACGT 3 cut(s) 240, 852, 1710
HpyCH4V TGCA 5 cut(s) 356, 366, 663, 1012, 1654
HpyF10VI GCNNNNNNNGC 3 cut(s) 1405, 1900, 1909
HpyF3I CTNAG 6 cut(s) 54, 541, 1169, 1263, 1311, 1601
HpySE526I ACGT 3 cut(s) 240, 852, 1710
Hsp92I GRCGYC 2 cut(s) 1259, 1745
Hsp92II CATG 4 cut(s) 48, 282, 677, 1511
HspAI GCGC 3 cut(s) 1055, 1259, 1809
KasI GGCGCC 1 cut(s) 1258
Kpn2I TCCGGA 1 cut(s) 1665
Kzo9I GATC 6 cut(s) 32, 98, 104, 152, 517, 641
LguI GCTCTTC 1 cut(s) 719
LmnI GCTCC 1 cut(s) 1105
Lsp1109I GCAGC 2 cut(s) 1411, 1414
LweI GCATC 5 cut(s) 163, 343, 1386, 1478, 1641
MaeI CTAG 8 cut(s) 90, 114, 132, 480, 576, 615, 1437, 1757
MaeII ACGT 3 cut(s) 240, 852, 1710
MaeIII GTNAC 7 cut(s) 205, 331, 497, 503, 509, 676, 1306
MalI GATC 6 cut(s) 34, 100, 106, 154, 519, 643
MboI GATC 6 cut(s) 32, 98, 104, 152, 517, 641
MflI RGATCY 2 cut(s) 104, 152
MhlI GDGCHC 4 cut(s) 55, 542, 623, 1110
MlsI TGGCCA 1 cut(s) 1329
MluCI AATT 8 cut(s) 309, 782, 969, 982, 1117, 1123, 1563, 1686
MluI ACGCGT 1 cut(s) 961
MluNI TGGCCA 1 cut(s) 1329
Mly113I GGCGCC 1 cut(s) 1259
MlyI GAGTC 1 cut(s) 436
MmeI TCCRAC 3 cut(s) 470, 1044, 1083
Mox20I TGGCCA 1 cut(s) 1329
Mph1103I ATGCAT 1 cut(s) 1656
MroI TCCGGA 1 cut(s) 1665
MroXI GAANNNNTTC 2 cut(s) 25, 713
MscI TGGCCA 1 cut(s) 1329
MseI TTAA 6 cut(s) 369, 1203, 1320, 1689, 1803, 1899
MslI CAYNNNNRTG 1 cut(s) 410
Msp20I TGGCCA 1 cut(s) 1329
MspA1I CMGCKG 1 cut(s) 1168
MspI CCGG 6 cut(s) 424, 938, 992, 1366, 1415, 1666
MvnI CGCG 4 cut(s) 307, 603, 963, 1811
MwoI GCNNNNNNNGC 3 cut(s) 1405, 1900, 1909
NarI GGCGCC 1 cut(s) 1259
NciI CCSGG 3 cut(s) 424, 938, 1366
NcoI CCATGG 1 cut(s) 44
NdeII GATC 6 cut(s) 32, 98, 104, 152, 517, 641
NlaIII CATG 4 cut(s) 48, 282, 677, 1511
NlaIV GGNNCC 5 cut(s) 422, 990, 1107, 1260, 1363
NmeAIII GCCGAG 3 cut(s) 144, 972, 1898
NmuCI GTSAC 4 cut(s) 497, 503, 509, 676
NruI TCGCGA 2 cut(s) 307, 603
NsbI TGCGCA 1 cut(s) 1056
NsiI ATGCAT 1 cut(s) 1656
NspV TTCGAA 2 cut(s) 840, 876
PceI AGGCCT 2 cut(s) 88, 1192
PciSI GCTCTTC 1 cut(s) 719
PcsI WCGNNNNNNNCGW 3 cut(s) 858, 864, 882
PdmI GAANNNNTTC 2 cut(s) 25, 713
PfeI GAWTC 5 cut(s) 8, 341, 1267, 1607, 1693
PflFI GACNNNGTC 2 cut(s) 851, 866
PfoI TCCNGGA 2 cut(s) 187, 422
PkrI GCNGC 3 cut(s) 1426, 1429, 1468
PleI GAGTC 1 cut(s) 436
PluTI GGCGCC 1 cut(s) 1262
PpsI GAGTC 1 cut(s) 436
PpuMI RGGWCCY 2 cut(s) 420, 1361
Psp124BI GAGCTC 1 cut(s) 55
Psp1406I AACGTT 1 cut(s) 1710
Psp5II RGGWCCY 2 cut(s) 420, 1361
PspEI GGTNACC 1 cut(s) 497
PspN4I GGNNCC 5 cut(s) 422, 990, 1107, 1260, 1363
PspPI GGNCC 5 cut(s) 63, 69, 420, 951, 1361
PspPPI RGGWCCY 2 cut(s) 420, 1361
PstI CTGCAG 1 cut(s) 665
PsuI RGATCY 2 cut(s) 104, 152
PsyI GACNNNGTC 2 cut(s) 851, 866
PvuII CAGCTG 1 cut(s) 1168
RruI TCGCGA 2 cut(s) 307, 603
RsaI GTAC 2 cut(s) 530, 1136
RsaNI GTAC 2 cut(s) 529, 1135
RseI CAYNNNNRTG 1 cut(s) 410
SacI GAGCTC 1 cut(s) 55
SalI GTCGAC 1 cut(s) 1082
SapI GCTCTTC 1 cut(s) 719
SaqAI TTAA 6 cut(s) 369, 1203, 1320, 1689, 1803, 1899
SatI GCNGC 3 cut(s) 1425, 1428, 1467
Sau3AI GATC 6 cut(s) 32, 98, 104, 152, 517, 641
Sau96I GGNCC 5 cut(s) 63, 69, 420, 951, 1361
SchI GAGTC 1 cut(s) 436
SduI GDGCHC 4 cut(s) 55, 542, 623, 1110
SfaNI GCATC 5 cut(s) 163, 343, 1386, 1478, 1641
SfcI CTRYAG 2 cut(s) 589, 661
SfoI GGCGCC 1 cut(s) 1260
SfuI TTCGAA 2 cut(s) 840, 876
SinI GGWCC 4 cut(s) 63, 69, 420, 1361
SmiMI CAYNNNNRTG 1 cut(s) 410
SmlI CTYRAG 1 cut(s) 1850
SmoI CTYRAG 1 cut(s) 1850
Sse9I AATT 8 cut(s) 309, 782, 969, 982, 1117, 1123, 1563, 1686
SseBI AGGCCT 2 cut(s) 88, 1192
SsiI CCGC 3 cut(s) 5, 1467, 1811
SspDI GGCGCC 1 cut(s) 1258
SspI AATATT 1 cut(s) 1481
SspMI CTAG 8 cut(s) 90, 114, 132, 480, 576, 615, 1437, 1757
SstI GAGCTC 1 cut(s) 55
StuI AGGCCT 2 cut(s) 88, 1192
StyI CCWWGG 4 cut(s) 44, 89, 437, 614
TaaI ACNGT 9 cut(s) 363, 412, 503, 509, 515, 533, 1021, 1325, 1549
TaiI ACGT 3 cut(s) 243, 855, 1713
TaqI TCGA 8 cut(s) 547, 707, 840, 876, 891, 924, 1076, 1083
TaqII GACCGA 2 cut(s) 51, 992
TasI AATT 8 cut(s) 309, 782, 969, 982, 1117, 1123, 1563, 1686
TatI WGTACW 1 cut(s) 1134
TauI GCSGC 1 cut(s) 1469
TfiI GAWTC 5 cut(s) 8, 341, 1267, 1607, 1693
Tru1I TTAA 6 cut(s) 369, 1203, 1320, 1689, 1803, 1899
Tru9I TTAA 6 cut(s) 369, 1203, 1320, 1689, 1803, 1899
TscAI CASTG 4 cut(s) 665, 1026, 1182, 1330
TseFI GTSAC 4 cut(s) 497, 503, 509, 676
TseI GCWGC 2 cut(s) 1424, 1427
Tsp45I GTSAC 4 cut(s) 497, 503, 509, 676
TspDTI ATGAA 4 cut(s) 267, 363, 1230, 1524
TspRI CASTG 4 cut(s) 665, 1026, 1182, 1330
Tth111I GACNNNGTC 2 cut(s) 851, 866
VpaK11BI GGWCC 4 cut(s) 63, 69, 420, 1361
XagI CCTNNNNNAGG 1 cut(s) 112
XapI RAATTY 5 cut(s) 309, 782, 982, 1117, 1123
XbaI TCTAGA 1 cut(s) 131
XcmI CCANNNNNNNNNTGG 1 cut(s) 1337
XmaJI CCTAGG 2 cut(s) 89, 614
XmiI GTMKAC 1 cut(s) 1083
XmnI GAANNNNTTC 2 cut(s) 25, 713
XspI CTAG 8 cut(s) 90, 114, 132, 480, 576, 615, 1437, 1757
Zsp2I ATGCAT 1 cut(s) 1656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.