Rmu_sc0009922.1_g000006

Ankyrin repeat domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009922.1
Physical Location & Seq
Reverse (-)
37023 .. 38006
984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009922.1_g000006.1.cds

Sequence Viewer

Length: 453 bp
atgctgaataggcgaaaacctgatatagctgctgccacttctagtaaatggcttccccttcacactcttgccgcatcaggagaatattaccttatggacgctttattgaaacatgaagctgatatcaatgctgtggataaggatgattggactgttcttcacaaagcaatcattggtaaaaaccaggccattacaaactatcttctcagagaatcggctaatccatttgttcgtgataaagatggtgctaccttgatgcattatgctgtccggacagcttcaagtcaagcaattaagattcttctgttatacaacgttgatataaaccttcaggacaatgatgggtggacgcccttacatctagctgttcaaggccgaagaacagatgtggtgaggcttttgttgattaaaggcgcggataagacattgaaaaacaaggtaactatgtactga
Functional Annotation

Protein Analysis

150

Amino Acids

16.88

Weight (kDa)

9.3

Isoelectric Point (pI)

30.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 416
AccIII TCCGGA 1 cut(s) 270
AciI CCGC 2 cut(s) 72, 416
AclI AACGTT 1 cut(s) 315
AcuI CTGAAG 1 cut(s) 314
AcyI GRCGYC 1 cut(s) 350
AfaI GTAC 1 cut(s) 449
AgsI TTSAA 4 cut(s) 109, 282, 371, 430
AjnI CCWGG 1 cut(s) 183
AluBI AGCT 4 cut(s) 29, 119, 278, 365
AluI AGCT 4 cut(s) 29, 119, 278, 365
Aor13HI TCCGGA 1 cut(s) 270
AoxI GGCC 2 cut(s) 186, 373
ApeKI GCWGC 2 cut(s) 29, 32
AspLEI GCGC 1 cut(s) 416
AsuHPI GGTGA 1 cut(s) 403
BbvI GCAGC 2 cut(s) 16, 19
BccI CCATC 2 cut(s) 236, 335
BciT130I CCWGG 1 cut(s) 185
BfaI CTAG 2 cut(s) 42, 362
BisI GCNGC 3 cut(s) 30, 33, 72
BlsI GCNGC 3 cut(s) 31, 34, 73
Bme1390I CCNGG 1 cut(s) 185
BmrFI CCNGG 1 cut(s) 185
BmsI GCATC 2 cut(s) 83, 246
BsaHI GRCGYC 1 cut(s) 350
BsaWI WCCGGW 1 cut(s) 270
BseAI TCCGGA 1 cut(s) 270
BseBI CCWGG 1 cut(s) 185
BseGI GGATG 1 cut(s) 148
BseMII CTCAG 1 cut(s) 220
BseXI GCAGC 2 cut(s) 16, 19
Bsh1236I CGCG 1 cut(s) 416
BshFI GGCC 2 cut(s) 188, 375
BsiSI CCGG 1 cut(s) 271
BsnI GGCC 2 cut(s) 188, 375
Bsp13I TCCGGA 1 cut(s) 270
BspACI CCGC 2 cut(s) 72, 416
BspANI GGCC 2 cut(s) 188, 375
BspCNI CTCAG 1 cut(s) 219
BspEI TCCGGA 1 cut(s) 270
BspFNI CGCG 1 cut(s) 416
BssNI GRCGYC 1 cut(s) 350
Bst2UI CCWGG 1 cut(s) 185
Bst4CI ACNGT 1 cut(s) 154
BstACI GRCGYC 1 cut(s) 350
BstDEI CTNAG 1 cut(s) 206
BstF5I GGATG 1 cut(s) 148
BstFNI CGCG 1 cut(s) 416
BstHHI GCGC 1 cut(s) 416
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 185
BstSCI CCNGG 1 cut(s) 183
BstUI CGCG 1 cut(s) 416
BstV1I GCAGC 2 cut(s) 16, 19
BsuRI GGCC 2 cut(s) 188, 375
BtsCI GGATG 1 cut(s) 148
CfoI GCGC 1 cut(s) 416
CseI GACGC 2 cut(s) 107, 358
Csp6I GTAC 1 cut(s) 448
CviAII CATG 1 cut(s) 113
CviJI RGCY 9 cut(s) 29, 52, 119, 188, 218, 278, 365, 375, 397
CviKI_1 RGCY 9 cut(s) 29, 52, 119, 188, 218, 278, 365, 375, 397
CviQI GTAC 1 cut(s) 448
DdeI CTNAG 1 cut(s) 206
Eco32I GATATC 1 cut(s) 124
Eco57I CTGAAG 1 cut(s) 314
EcoRII CCWGG 1 cut(s) 183
EcoRV GATATC 1 cut(s) 124
EcoT22I ATGCAT 1 cut(s) 261
FaeI CATG 1 cut(s) 116
FaiI YATR 7 cut(s) 26, 95, 114, 264, 310, 323, 446
FatI CATG 1 cut(s) 112
Fnu4HI GCNGC 3 cut(s) 30, 33, 72
FokI GGATG 1 cut(s) 155
Fsp4HI GCNGC 3 cut(s) 30, 33, 72
FspBI CTAG 2 cut(s) 42, 362
GlaI GCGC 1 cut(s) 415
GluI GCNGC 3 cut(s) 30, 33, 72
HaeIII GGCC 2 cut(s) 188, 375
HapII CCGG 1 cut(s) 271
HgaI GACGC 2 cut(s) 107, 358
HhaI GCGC 1 cut(s) 416
Hin1I GRCGYC 1 cut(s) 350
Hin1II CATG 1 cut(s) 116
Hin6I GCGC 1 cut(s) 414
HinP1I GCGC 1 cut(s) 414
HinfI GANTC 2 cut(s) 212, 298
HpaII CCGG 1 cut(s) 271
HphI GGTGA 1 cut(s) 403
Hpy166II GTNNAC 1 cut(s) 348
Hpy188I TCNGA 1 cut(s) 209
Hpy188III TCNNGA 4 cut(s) 78, 233, 271, 332
Hpy8I GTNNAC 1 cut(s) 348
HpyAV CCTTC 2 cut(s) 68, 338
HpyCH4III ACNGT 1 cut(s) 154
HpyCH4IV ACGT 1 cut(s) 315
HpyCH4V TGCA 1 cut(s) 259
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpyF3I CTNAG 1 cut(s) 206
HpySE526I ACGT 1 cut(s) 315
Hsp92I GRCGYC 1 cut(s) 350
Hsp92II CATG 1 cut(s) 116
HspAI GCGC 1 cut(s) 414
Kpn2I TCCGGA 1 cut(s) 270
LpnPI CCDG 6 cut(s) 33, 63, 170, 197, 284, 317
Lsp1109I GCAGC 2 cut(s) 16, 19
LweI GCATC 2 cut(s) 83, 246
MaeI CTAG 2 cut(s) 42, 362
MaeII ACGT 1 cut(s) 315
MaeIII GTNAC 1 cut(s) 439
MboII GAAGA 4 cut(s) 149, 194, 293, 390
MluCI AATT 1 cut(s) 291
MnlI CCTC 1 cut(s) 387
Mph1103I ATGCAT 1 cut(s) 261
MroI TCCGGA 1 cut(s) 270
MseI TTAA 2 cut(s) 294, 408
MspI CCGG 1 cut(s) 271
MspR9I CCNGG 1 cut(s) 185
MvaI CCWGG 1 cut(s) 185
MvnI CGCG 1 cut(s) 416
MwoI GCNNNNNNNGC 1 cut(s) 10
NlaIII CATG 1 cut(s) 116
NsiI ATGCAT 1 cut(s) 261
PfeI GAWTC 2 cut(s) 212, 298
PkrI GCNGC 3 cut(s) 31, 34, 73
Psp1406I AACGTT 1 cut(s) 315
Psp6I CCWGG 1 cut(s) 183
PspGI CCWGG 1 cut(s) 183
RsaI GTAC 1 cut(s) 449
RsaNI GTAC 1 cut(s) 448
SaqAI TTAA 2 cut(s) 294, 408
SatI GCNGC 3 cut(s) 30, 33, 72
ScrFI CCNGG 1 cut(s) 185
SfaNI GCATC 2 cut(s) 83, 246
Sse9I AATT 1 cut(s) 291
SsiI CCGC 2 cut(s) 72, 416
SspI AATATT 1 cut(s) 86
SspMI CTAG 2 cut(s) 42, 362
StyD4I CCNGG 1 cut(s) 183
TaaI ACNGT 1 cut(s) 154
TaiI ACGT 1 cut(s) 318
TasI AATT 1 cut(s) 291
TatI WGTACW 1 cut(s) 447
TauI GCSGC 1 cut(s) 74
TfiI GAWTC 2 cut(s) 212, 298
Tru1I TTAA 2 cut(s) 294, 408
Tru9I TTAA 2 cut(s) 294, 408
TseI GCWGC 2 cut(s) 29, 32
TspDTI ATGAA 1 cut(s) 129
XspI CTAG 2 cut(s) 42, 362
Zsp2I ATGCAT 1 cut(s) 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.