Prupe.8G013700_v2.0.a1

Serine threonine-protein phosphatase 7 long form homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
1134441 .. 1135468
1028 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G013700.2

Sequence Viewer

Length: 309 bp
ATGAGCTCCCTGAAAATGCTACTGCCTTTCTTCAAGCACAGACAACTATTGATACAGCTTCGGAGTTCTTCTCTTCAGGAATTCTTGGAGGTGCAAGCTTTTAAAATTCCTGCCCTTCAAGAACGCTTAGGCGTGGCTGCCGAGAAGATAGTGCATCTTAGAGCAAAATTAGACGCTGCCGTTGAGAGACAAACTATGATGGATGAGGTTCCTGCTGCCTTTGTAGATAAGAATAAAATTGCCAAGCAGAAGTTGGCTTCCATGAATCCTCAAGCTGCTGACATCGATCATAGTTTGTCTCCGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.47

Weight (kDa)

9.25

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 80, 105
AcuI CTGAAG 1 cut(s) 59
AgsI TTSAA 2 cut(s) 34, 119
AluBI AGCT 4 cut(s) 6, 58, 98, 275
AluI AGCT 4 cut(s) 6, 58, 98, 275
Alw21I GWGCWC 1 cut(s) 8
Alw26I GTCTC 2 cut(s) 181, 303
ApeKI GCWGC 4 cut(s) 137, 176, 215, 275
ApoI RAATTY 2 cut(s) 80, 105
BanII GRGCYC 1 cut(s) 8
Bbv12I GWGCWC 1 cut(s) 8
BbvI GCAGC 4 cut(s) 124, 163, 202, 262
BccI CCATC 1 cut(s) 193
BceAI ACGGC 1 cut(s) 164
BcoDI GTCTC 2 cut(s) 181, 303
BisI GCNGC 4 cut(s) 138, 177, 216, 276
BlsI GCNGC 4 cut(s) 139, 178, 217, 277
BmiI GGNNCC 1 cut(s) 210
BmsI GCATC 1 cut(s) 163
BplI GAGNNNNNCTC 2 cut(s) 55, 87
Bpu10I CCTNAGC 1 cut(s) 127
BpuEI CTTGAG 1 cut(s) 255
Bsa29I ATCGAT 1 cut(s) 285
BseCI ATCGAT 1 cut(s) 285
BseGI GGATG 1 cut(s) 208
BseXI GCAGC 4 cut(s) 124, 163, 202, 262
BshVI ATCGAT 1 cut(s) 285
BsiHKAI GWGCWC 1 cut(s) 8
BsmAI GTCTC 2 cut(s) 181, 303
Bsp1286I GDGCHC 1 cut(s) 8
Bsp143I GATC 1 cut(s) 286
BspDI ATCGAT 1 cut(s) 285
BspLI GGNNCC 1 cut(s) 210
BssMI GATC 1 cut(s) 286
Bst6I CTCTTC 1 cut(s) 78
BstC8I GCNNGC 1 cut(s) 96
BstDEI CTNAG 2 cut(s) 127, 158
BstF5I GGATG 1 cut(s) 208
BstKTI GATC 1 cut(s) 289
BstMAI GTCTC 2 cut(s) 181, 303
BstMBI GATC 1 cut(s) 286
BstV1I GCAGC 4 cut(s) 124, 163, 202, 262
Bsu15I ATCGAT 1 cut(s) 285
BsuTUI ATCGAT 1 cut(s) 285
BtsCI GGATG 1 cut(s) 208
Cac8I GCNNGC 1 cut(s) 96
ClaI ATCGAT 1 cut(s) 285
CseI GACGC 1 cut(s) 182
CviAII CATG 1 cut(s) 262
CviJI RGCY 6 cut(s) 6, 58, 98, 137, 257, 275
CviKI_1 RGCY 6 cut(s) 6, 58, 98, 137, 257, 275
DdeI CTNAG 2 cut(s) 127, 158
DpnI GATC 1 cut(s) 288
DpnII GATC 1 cut(s) 286
DraI TTTAAA 1 cut(s) 103
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
Ecl136II GAGCTC 1 cut(s) 6
Eco24I GRGCYC 1 cut(s) 8
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 1 cut(s) 59
EcoICRI GAGCTC 1 cut(s) 6
EcoRI GAATTC 1 cut(s) 80
EcoT38I GRGCYC 1 cut(s) 8
FaeI CATG 1 cut(s) 265
FaiI YATR 3 cut(s) 197, 263, 291
FatI CATG 1 cut(s) 261
Fnu4HI GCNGC 4 cut(s) 138, 177, 216, 276
FokI GGATG 1 cut(s) 215
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 4 cut(s) 138, 177, 216, 276
GluI GCNGC 4 cut(s) 138, 177, 216, 276
HgaI GACGC 1 cut(s) 182
Hin1II CATG 1 cut(s) 265
HindIII AAGCTT 1 cut(s) 96
HinfI GANTC 1 cut(s) 265
Hpy188I TCNGA 1 cut(s) 63
Hpy188III TCNNGA 2 cut(s) 77, 119
HpyAV CCTTC 1 cut(s) 125
HpyCH4V TGCA 2 cut(s) 94, 154
HpyF3I CTNAG 2 cut(s) 127, 158
Hsp92II CATG 1 cut(s) 265
Kzo9I GATC 1 cut(s) 286
LmnI GCTCC 1 cut(s) 11
LpnPI CCDG 4 cut(s) 23, 62, 123, 225
Lsp1109I GCAGC 4 cut(s) 124, 163, 202, 262
LweI GCATC 1 cut(s) 163
MalI GATC 1 cut(s) 288
MboI GATC 1 cut(s) 286
MboII GAAGA 4 cut(s) 22, 60, 65, 157
MhlI GDGCHC 1 cut(s) 8
MluCI AATT 4 cut(s) 80, 105, 167, 237
MnlI CCTC 3 cut(s) 82, 199, 279
MseI TTAA 1 cut(s) 102
NdeII GATC 1 cut(s) 286
NlaIII CATG 1 cut(s) 265
NlaIV GGNNCC 1 cut(s) 210
NmeAIII GCCGAG 1 cut(s) 166
PfeI GAWTC 1 cut(s) 265
PkrI GCNGC 4 cut(s) 139, 178, 217, 277
Psp124BI GAGCTC 1 cut(s) 8
PspN4I GGNNCC 1 cut(s) 210
SacI GAGCTC 1 cut(s) 8
SaqAI TTAA 1 cut(s) 102
SatI GCNGC 4 cut(s) 138, 177, 216, 276
Sau3AI GATC 1 cut(s) 286
SduI GDGCHC 1 cut(s) 8
SetI ASST 6 cut(s) 8, 60, 93, 100, 210, 277
SfaNI GCATC 1 cut(s) 163
SmlI CTYRAG 1 cut(s) 270
SmoI CTYRAG 1 cut(s) 270
Sse9I AATT 4 cut(s) 80, 105, 167, 237
SstI GAGCTC 1 cut(s) 8
TaqI TCGA 1 cut(s) 285
TasI AATT 4 cut(s) 80, 105, 167, 237
TfiI GAWTC 1 cut(s) 265
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TseI GCWGC 4 cut(s) 137, 176, 215, 275
TspDTI ATGAA 1 cut(s) 278
TspGWI ACGGA 1 cut(s) 291
XapI RAATTY 2 cut(s) 80, 105
XcmI CCANNNNNNNNNTGG 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.