Rmu_ssc0000189.1_g000023

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000189.1
Physical Location & Seq
Forward (+)
185938 .. 188574
2637 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000189.1_g000023.1.cds

Sequence Viewer

Length: 1743 bp
atggctgctgataggggagagattattcctagggaaaacttagctattttggctcaatggaaggtggacgatatagtccttgcagcattagaggggacggggttcaattatttatatgatttagcagtgaaggtgggcagaaatcagcatgtcaatggcatgatagatgctcttgtgaagcattatgacaaaaatgacatgtgtttaaaagtccaggaccaacacttattctttggattagaagacgtggtgttcattagtgggcttaaggtggaggggaagctattgactaagggagggatagaagaagccatccaggtaagtagagtccaagatgaaaaaggtaatagatatgtggaatttttgggtaatgtgccatctgagtacatgaaggagggcggcaaagctataacttttgaagggttgcaaaggacgttcgagaaggtacccagagatgtcagtgaggaaacatttgctagacatgttggagcctttgccctctatgttgtcaacatgacaatcacggtgaccaccgagaataaatatgagagtgtggcctgcttgaaggccttttctgacatttaccaaataaagaacttcgcatggggagttgcaatgctttcccaagtccactatagtttgatgaaatatgagaccaagaagggggctaatattggaggtcacatgtacttcttgatggtgtgggtgttggagcatctccctgcctttcgagatagtctaggggttttggttcctgcacagtgcaatttttcgctggcctgtagctgggcatcacccctttccgaaaagcttgctaacaggaaccggcatcaatcctatagtcagctgctggatcagcattgcgaggttgattggaatccttattctaggctgggagatacttttctctccgaggggattagcaaccagcaacggatgagagcgtatcgtgggttttcaacggtggatgtgagcggttgtcgccccttgtggcaaataaaaatctcggacaagactggtaaagaagtaacagtacagaactggacaaaacataaagcagagtgggataactttgagcaatgttttgtaaccgggacacctttggctggtgacgttagctccgccttgagaagcaatgatactccccatgctcttcatgcagatactcctcatgtagatactccacatactcctcatgctcctcatgcaggtactccccatactctccatgttgctcatgcagatactcctcatgctcctcgtgcagatactcatgatgcagatttgcatgatgagatggagacaaattggttgaatggtgatggtgaattggtgatgatgataatcgacttaaacattcatgaggatgatggtgatggtagaggtggtggtgatcatgacatttcgctccatatgtttcatgattactttgttaggcagaatgatgatggcttttatcatgatgatgaggaggaggatgatggtgatggtagaggtggtggtgatcatgacatttcgctccatatgtttcatgattactttgttaggcataatgatgatggtccggatgattcaccagtccatgaggcagtcaacccgcaagtcaatgagacaattgaggagtcaatcgatttggattattctttagtcgataaggcagtcaataagcgagtcatctcttggcaattacgctctgacattaaggttagagattggaacacctccaccaagaagcctccttga

Protein Analysis

580

Amino Acids

65.44

Weight (kDa)

5.18

Isoelectric Point (pI)

29.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 74
Acc36I ACCTGC 1 cut(s) 1199
Acc65I GGTACC 1 cut(s) 445
AccB1I GGYRCC 1 cut(s) 445
AccBSI CCGCTC 1 cut(s) 975
AccIII TCCGGA 1 cut(s) 1564
AciI CCGC 4 cut(s) 399, 975, 1122, 1598
AclWI GGATC 1 cut(s) 861
AcsI RAATTY 1 cut(s) 359
AfaI GTAC 5 cut(s) 386, 447, 689, 1035, 1213
AfiI CCNNNNNNNGG 4 cut(s) 663, 786, 1106, 1208
AflII CTTAAG 1 cut(s) 266
AflIII ACRYGT 3 cut(s) 198, 481, 684
AgsI TTSAA 5 cut(s) 106, 419, 565, 960, 1315
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 2 cut(s) 213, 315
AluBI AGCT 7 cut(s) 44, 283, 407, 786, 811, 847, 1119
AluI AGCT 7 cut(s) 44, 283, 407, 786, 811, 847, 1119
Alw26I GTCTC 3 cut(s) 647, 1295, 1604
AlwI GGATC 1 cut(s) 861
AlwNI CAGNNNCTG 1 cut(s) 850
Aor13HI TCCGGA 1 cut(s) 1564
AoxI GGCC 3 cut(s) 555, 567, 777
ApeKI GCWGC 3 cut(s) 5, 83, 847
ApoI RAATTY 1 cut(s) 359
Asp718I GGTACC 1 cut(s) 445
AspA2I CCTAGG 1 cut(s) 29
AspS9I GGNCC 2 cut(s) 217, 1562
AsuC2I CCSGG 1 cut(s) 1093
AvaII GGWCC 2 cut(s) 217, 1562
AvrII CCTAGG 1 cut(s) 29
BanI GGYRCC 1 cut(s) 445
BarI GAAGNNNNNNTAC 4 cut(s) 1017, 1049, 1123, 1155
BauI CACGAG 1 cut(s) 1260
BbsI GAAGAC 1 cut(s) 249
BbvI GCAGC 2 cut(s) 95, 834
BcgI CGANNNNNNTGC 2 cut(s) 794, 828
BciT130I CCWGG 2 cut(s) 215, 317
BclI TGATCA 2 cut(s) 1393, 1504
BcnI CCSGG 1 cut(s) 1093
BcoDI GTCTC 3 cut(s) 647, 1295, 1604
BfaI CTAG 4 cut(s) 30, 477, 740, 888
BfmI CTRYAG 3 cut(s) 634, 781, 838
BfrI CTTAAG 1 cut(s) 266
BfuAI ACCTGC 1 cut(s) 1199
BisI GCNGC 4 cut(s) 6, 84, 400, 848
BlnI CCTAGG 1 cut(s) 29
BlsI GCNGC 4 cut(s) 7, 85, 401, 849
Bme1390I CCNGG 3 cut(s) 215, 317, 1093
Bme18I GGWCC 2 cut(s) 217, 1562
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 2 cut(s) 217, 1562
BmiI GGNNCC 4 cut(s) 447, 490, 753, 824
BmrFI CCNGG 3 cut(s) 215, 317, 1093
BmsI GCATC 5 cut(s) 157, 724, 800, 838, 1267
BpiI GAAGAC 1 cut(s) 249
BpuEI CTTGAG 1 cut(s) 1147
BpuMI CCSGG 1 cut(s) 1093
Bsa29I ATCGAT 1 cut(s) 1629
BsaBI GATNNNNATC 2 cut(s) 876, 1343
BsaI GGTCTC 1 cut(s) 647
BsaJI CCNNGG 2 cut(s) 29, 912
BsaWI WCCGGW 1 cut(s) 1564
BsaXI ACNNNNNCTCC 2 cut(s) 1103, 1133
Bsc4I CCNNNNNNNGG 4 cut(s) 663, 786, 1106, 1208
Bse118I RCCGGY 1 cut(s) 825
Bse1I ACTGG 3 cut(s) 1021, 1046, 1577
Bse3DI GCAATG 4 cut(s) 621, 859, 1085, 1141
Bse8I GATNNNNATC 2 cut(s) 876, 1343
BseAI TCCGGA 1 cut(s) 1564
BseBI CCWGG 2 cut(s) 215, 317
BseCI ATCGAT 1 cut(s) 1629
BseDI CCNNGG 2 cut(s) 29, 912
BseGI GGATG 6 cut(s) 312, 942, 973, 1372, 1483, 1573
BseJI GATNNNNATC 2 cut(s) 876, 1343
BseLI CCNNNNNNNGG 4 cut(s) 663, 786, 1106, 1208
BseMI GCAATG 4 cut(s) 621, 859, 1085, 1141
BseMII CTCAG 1 cut(s) 372
BseNI ACTGG 3 cut(s) 1021, 1046, 1577
BseRI GAGGAG 8 cut(s) 1158, 1182, 1191, 1239, 1248, 1484, 1487, 1634
BseXI GCAGC 2 cut(s) 95, 834
BseYI CCCAGC 2 cut(s) 786, 892
BsgI GTGCAG 2 cut(s) 741, 1284
BshFI GGCC 3 cut(s) 557, 569, 779
BshNI GGYRCC 1 cut(s) 445
BshVI ATCGAT 1 cut(s) 1629
BsiSI CCGG 3 cut(s) 826, 1092, 1565
BslFI GGGAC 2 cut(s) 109, 1108
BslI CCNNNNNNNGG 4 cut(s) 663, 786, 1106, 1208
BsmAI GTCTC 3 cut(s) 647, 1295, 1604
BsmFI GGGAC 2 cut(s) 109, 1108
BsnI GGCC 3 cut(s) 557, 569, 779
Bso31I GGTCTC 1 cut(s) 647
Bsp13I TCCGGA 1 cut(s) 1564
Bsp143I GATC 3 cut(s) 853, 1393, 1504
BspACI CCGC 4 cut(s) 399, 975, 1122, 1598
BspANI GGCC 3 cut(s) 557, 569, 779
BspCNI CTCAG 1 cut(s) 373
BspDI ATCGAT 1 cut(s) 1629
BspEI TCCGGA 1 cut(s) 1564
BspHI TCATGA 7 cut(s) 1273, 1360, 1396, 1420, 1459, 1507, 1531
BspLI GGNNCC 4 cut(s) 447, 490, 753, 824
BspMI ACCTGC 1 cut(s) 1199
BspPI GGATC 1 cut(s) 861
BspQI GCTCTTC 1 cut(s) 1158
BspT107I GGYRCC 1 cut(s) 445
BspTI CTTAAG 1 cut(s) 266
BspTNI GGTCTC 1 cut(s) 647
BsrBI CCGCTC 1 cut(s) 975
BsrDI GCAATG 4 cut(s) 621, 859, 1085, 1141
BsrFI RCCGGY 1 cut(s) 825
BsrI ACTGG 3 cut(s) 1021, 1046, 1577
BssAI RCCGGY 1 cut(s) 825
BssECI CCNNGG 2 cut(s) 29, 912
BssMI GATC 3 cut(s) 853, 1393, 1504
BssSI CACGAG 1 cut(s) 1260
BssT1I CCWWGG 1 cut(s) 29
Bst2BI CACGAG 1 cut(s) 1260
Bst2UI CCWGG 2 cut(s) 215, 317
Bst4CI ACNGT 4 cut(s) 526, 762, 964, 1033
Bst6I CTCTTC 1 cut(s) 1158
BstAFI CTTAAG 1 cut(s) 266
BstC8I GCNNGC 3 cut(s) 559, 777, 813
BstDEI CTNAG 3 cut(s) 40, 291, 381
BstEII GGTNACC 1 cut(s) 526
BstENI CCTNNNNNAGG 1 cut(s) 1206
BstF5I GGATG 6 cut(s) 312, 942, 973, 1372, 1483, 1573
BstKTI GATC 3 cut(s) 856, 1396, 1507
BstMAI GTCTC 3 cut(s) 647, 1295, 1604
BstMBI GATC 3 cut(s) 853, 1393, 1504
BstMWI GCNNNNNNNGC 6 cut(s) 50, 856, 981, 1157, 1205, 1262
BstNI CCWGG 2 cut(s) 215, 317
BstNSI RCATGY 4 cut(s) 152, 202, 485, 688
BstPI GGTNACC 1 cut(s) 526
BstSCI CCNGG 3 cut(s) 213, 315, 1091
BstSFI CTRYAG 3 cut(s) 634, 781, 838
BstV1I GCAGC 2 cut(s) 95, 834
BstV2I GAAGAC 1 cut(s) 249
Bsu15I ATCGAT 1 cut(s) 1629
BsuRI GGCC 3 cut(s) 557, 569, 779
BsuTUI ATCGAT 1 cut(s) 1629
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 6 cut(s) 312, 942, 973, 1372, 1483, 1573
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 3 cut(s) 132, 466, 767
BveI ACCTGC 1 cut(s) 1199
Cac8I GCNNGC 3 cut(s) 559, 777, 813
CaiI CAGNNNCTG 1 cut(s) 850
CciI TCATGA 7 cut(s) 1273, 1360, 1396, 1420, 1459, 1507, 1531
Cfr10I RCCGGY 1 cut(s) 825
Cfr13I GGNCC 2 cut(s) 217, 1562
ClaI ATCGAT 1 cut(s) 1629
Csp6I GTAC 5 cut(s) 385, 446, 688, 1034, 1212
CviQI GTAC 5 cut(s) 385, 446, 688, 1034, 1212
DdeI CTNAG 3 cut(s) 40, 291, 381
DpnI GATC 3 cut(s) 855, 1395, 1506
DpnII GATC 3 cut(s) 853, 1393, 1504
DraI TTTAAA 1 cut(s) 207
DrdI GACNNNNNNGTC 1 cut(s) 74
DseDI GACNNNNNNGTC 1 cut(s) 74
Eam1104I CTCTTC 1 cut(s) 1158
EarI CTCTTC 1 cut(s) 1158
EciI GGCGGA 1 cut(s) 1111
Eco130I CCWWGG 1 cut(s) 29
Eco147I AGGCCT 1 cut(s) 569
Eco31I GGTCTC 1 cut(s) 647
Eco47I GGWCC 2 cut(s) 217, 1562
Eco91I GGTNACC 1 cut(s) 526
EcoNI CCTNNNNNAGG 1 cut(s) 1206
EcoO65I GGTNACC 1 cut(s) 526
EcoRII CCWGG 2 cut(s) 213, 315
EcoT14I CCWWGG 1 cut(s) 29
ErhI CCWWGG 1 cut(s) 29
FaqI GGGAC 2 cut(s) 109, 1108
FauI CCCGC 1 cut(s) 1605
FauNDI CATATG 2 cut(s) 1413, 1524
FbaI TGATCA 2 cut(s) 1393, 1504
Fnu4HI GCNGC 4 cut(s) 6, 84, 400, 848
FokI GGATG 6 cut(s) 299, 949, 980, 1379, 1490, 1580
Fsp4HI GCNGC 4 cut(s) 6, 84, 400, 848
FspBI CTAG 4 cut(s) 30, 477, 740, 888
GluI GCNGC 4 cut(s) 6, 84, 400, 848
GsaI CCCAGC 2 cut(s) 790, 896
HaeIII GGCC 3 cut(s) 557, 569, 779
HapII CCGG 3 cut(s) 826, 1092, 1565
HincII GTYRAC 2 cut(s) 511, 1594
HindII GTYRAC 2 cut(s) 511, 1594
HindIII AAGCTT 1 cut(s) 809
HinfI GANTC 5 cut(s) 327, 877, 1571, 1622, 1671
HpaII CCGG 3 cut(s) 826, 1092, 1565
Hpy166II GTNNAC 4 cut(s) 67, 511, 631, 1594
Hpy188I TCNGA 6 cut(s) 382, 577, 805, 913, 1009, 1696
Hpy8I GTNNAC 4 cut(s) 67, 511, 631, 1594
HpyAV CCTTC 7 cut(s) 55, 124, 385, 413, 436, 559, 655
HpyCH4III ACNGT 4 cut(s) 526, 762, 964, 1033
HpyCH4IV ACGT 3 cut(s) 246, 434, 1113
HpyF10VI GCNNNNNNNGC 6 cut(s) 50, 856, 981, 1157, 1205, 1262
HpyF3I CTNAG 3 cut(s) 40, 291, 381
HpySE526I ACGT 3 cut(s) 246, 434, 1113
Kpn2I TCCGGA 1 cut(s) 1564
KpnI GGTACC 1 cut(s) 449
Ksp22I TGATCA 2 cut(s) 1393, 1504
Kzo9I GATC 3 cut(s) 853, 1393, 1504
LguI GCTCTTC 1 cut(s) 1158
LmnI GCTCC 7 cut(s) 488, 712, 1124, 1204, 1261, 1413, 1524
Lsp1109I GCAGC 2 cut(s) 95, 834
LweI GCATC 5 cut(s) 157, 724, 800, 838, 1267
MaeI CTAG 4 cut(s) 30, 477, 740, 888
MaeII ACGT 3 cut(s) 246, 434, 1113
MaeIII GTNAC 5 cut(s) 526, 680, 1027, 1087, 1109
MalI GATC 3 cut(s) 855, 1395, 1506
MbiI CCGCTC 1 cut(s) 975
MboI GATC 3 cut(s) 853, 1393, 1504
MboII GAAGA 3 cut(s) 254, 317, 1145
MfeI CAATTG 1 cut(s) 1614
MluCI AATT 7 cut(s) 106, 359, 766, 1306, 1328, 1614, 1685
MlyI GAGTC 3 cut(s) 336, 1631, 1680
MmeI TCCRAC 2 cut(s) 466, 690
MroI TCCGGA 1 cut(s) 1564
MseI TTAA 4 cut(s) 206, 267, 1352, 1701
MslI CAYNNNNRTG 4 cut(s) 153, 1365, 1464, 1554
MspA1I CMGCKG 1 cut(s) 847
MspCI CTTAAG 1 cut(s) 266
MspI CCGG 3 cut(s) 826, 1092, 1565
MspR9I CCNGG 3 cut(s) 215, 317, 1093
MunI CAATTG 1 cut(s) 1614
MvaI CCWGG 2 cut(s) 215, 317
MwoI GCNNNNNNNGC 6 cut(s) 50, 856, 981, 1157, 1205, 1262
NciI CCSGG 1 cut(s) 1093
NdeI CATATG 2 cut(s) 1413, 1524
NdeII GATC 3 cut(s) 853, 1393, 1504
NlaIV GGNNCC 4 cut(s) 447, 490, 753, 824
NmuCI GTSAC 3 cut(s) 526, 680, 1109
NspI RCATGY 4 cut(s) 152, 202, 485, 688
PagI TCATGA 7 cut(s) 1273, 1360, 1396, 1420, 1459, 1507, 1531
PceI AGGCCT 1 cut(s) 569
PciI ACATGT 3 cut(s) 198, 481, 684
PciSI GCTCTTC 1 cut(s) 1158
PfeI GAWTC 2 cut(s) 877, 1571
PfoI TCCNGGA 1 cut(s) 213
PkrI GCNGC 4 cut(s) 7, 85, 401, 849
PleI GAGTC 3 cut(s) 335, 1630, 1679
PpsI GAGTC 3 cut(s) 335, 1630, 1679
PscI ACATGT 3 cut(s) 198, 481, 684
Psp6I CCWGG 2 cut(s) 213, 315
PspEI GGTNACC 1 cut(s) 526
PspFI CCCAGC 2 cut(s) 786, 892
PspGI CCWGG 2 cut(s) 213, 315
PspN4I GGNNCC 4 cut(s) 447, 490, 753, 824
PspPI GGNCC 2 cut(s) 217, 1562
PstNI CAGNNNCTG 1 cut(s) 850
PvuII CAGCTG 1 cut(s) 847
RsaI GTAC 5 cut(s) 386, 447, 689, 1035, 1213
RsaNI GTAC 5 cut(s) 385, 446, 688, 1034, 1212
RseI CAYNNNNRTG 4 cut(s) 153, 1365, 1464, 1554
SapI GCTCTTC 1 cut(s) 1158
SaqAI TTAA 4 cut(s) 206, 267, 1352, 1701
SatI GCNGC 4 cut(s) 6, 84, 400, 848
Sau3AI GATC 3 cut(s) 853, 1393, 1504
Sau96I GGNCC 2 cut(s) 217, 1562
SchI GAGTC 3 cut(s) 336, 1631, 1680
ScrFI CCNGG 3 cut(s) 215, 317, 1093
SfaNI GCATC 5 cut(s) 157, 724, 800, 838, 1267
SfcI CTRYAG 3 cut(s) 634, 781, 838
SinI GGWCC 2 cut(s) 217, 1562
SmiMI CAYNNNNRTG 4 cut(s) 153, 1365, 1464, 1554
SmlI CTYRAG 2 cut(s) 266, 1126
SmoI CTYRAG 2 cut(s) 266, 1126
Sse9I AATT 7 cut(s) 106, 359, 766, 1306, 1328, 1614, 1685
SseBI AGGCCT 1 cut(s) 569
SsiI CCGC 4 cut(s) 399, 975, 1122, 1598
SspI AATATT 1 cut(s) 673
SspMI CTAG 4 cut(s) 30, 477, 740, 888
StuI AGGCCT 1 cut(s) 569
StyD4I CCNGG 3 cut(s) 213, 315, 1091
StyI CCWWGG 1 cut(s) 29
TaaI ACNGT 4 cut(s) 526, 762, 964, 1033
TaiI ACGT 3 cut(s) 249, 437, 1116
TaqI TCGA 5 cut(s) 438, 730, 1347, 1629, 1650
TasI AATT 7 cut(s) 106, 359, 766, 1306, 1328, 1614, 1685
TatI WGTACW 3 cut(s) 384, 687, 1033
TauI GCSGC 1 cut(s) 402
TfiI GAWTC 2 cut(s) 877, 1571
Tru1I TTAA 4 cut(s) 206, 267, 1352, 1701
Tru9I TTAA 4 cut(s) 206, 267, 1352, 1701
TscAI CASTG 3 cut(s) 132, 466, 767
TseFI GTSAC 3 cut(s) 526, 680, 1109
TseI GCWGC 3 cut(s) 5, 83, 847
Tsp45I GTSAC 3 cut(s) 526, 680, 1109
TspDTI ATGAA 8 cut(s) 244, 351, 404, 659, 1145, 1349, 1409, 1520
TspGWI ACGGA 1 cut(s) 949
TspRI CASTG 3 cut(s) 132, 466, 767
Vha464I CTTAAG 1 cut(s) 266
VpaK11BI GGWCC 2 cut(s) 217, 1562
XagI CCTNNNNNAGG 1 cut(s) 1206
XapI RAATTY 1 cut(s) 359
XceI RCATGY 4 cut(s) 152, 202, 485, 688
XmaJI CCTAGG 1 cut(s) 29
XspI CTAG 4 cut(s) 30, 477, 740, 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.