Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0001459

Physical Location & Seq

Genomic Coordinates Reverse (-)

43119016 .. 43133163

Gene Structure 14148 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG221500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGCATAGATCTGGAGCTGCCATGGCTTGGAATGTGTTCAAGTTCTGCACAGCTCTGCGGGGTCTGGGCTCGGTTATGATCCTCTTGGTTCTTGGAGTTGTGGGTGTGACGTATTACACTGTCGTTTTGACTAATTATGGCCCGGCTTTGTATGCTGGTGGGCTTGATTCTCTCATTGCTATTGTCGTTTTGATCTTGTTCCATTCTTTGTTGGTGATGCTACTATGGAGTTACTTTTCTGTTGTTTTGACGGATCCCGGTGGTGTGCCACCGAATTGGAGGCCTGCTGTTGATGAAGAAAGAGGGGAAGCTGACCCATTGAATGGTTCAGAATTTAGTGATTTGCAAACTGACCCATCAAATCAAAGAGTCCGGTATTGCCGGAAGTGCAACCAGTTGAAACCACCTCGTTGCCATCATTGCTCAGTTTGTGGGCGGTGTGTACTGAAAATGGATCACCATTGTGTATGGGTTGTTAATTGTGTTGGGGCCTTAAATTACAAATATTTTCTTCTTTTCTTGTTCTACACGTTCCTTGAGACAACTGTTGTAACTTTATGCTTGCTGCCACACTTCATTGCATTCTTTAGTGAAGGAGAAATACCTGGAACACCAGGGACCCTTGCAACTACTTTCCTTGCTTTTGTTTTGAATCTTGCATTTGCATTAAGCGTGCTGGGGTTTCTTATCATGCATATATCCTTGGTAGCTGCAAATACTACAACCATCGAGGCGTATGAGAAGAAAACCACTCCGAAATGGCGCTATGACCTTGGTCGAAAAAAGAATTTTGAACAGGTGTTTGGGACAGACAAGCTATACTGGTTCATCCCTGCTTATTCAGAAGAAGATTTGCGACGGATACCAGCGCTCCAGGGTCTCGAGTATCCATCTAAGCCTGAGGGTCTTGACAACCAAGGTCTAAAGGGATTTTTGCGGGATGACATTTCAAAATTGCGTCATCTACAGAGCATAATGACTGTGAGTAGGGAAAAGTTAACTAAGTTGTCTCAATGGAACGTGGACCAAAGGGTCCTTGAGGCATTAAGGGGGACGGGGTTTGATCATTTATATAGATTAGCACAAAATTTGGGTAGACGTCACCATGACAACTACATGTTAAGTGCTCTTGTCAAGTATTATCATGTTGGTGACATGTGTTTTAAAGTCAACAATCGGAATTTATTTTTTGGTTTAGAAGATGTGCTTTATATCTCTGGGCTTCAGGTAGAAGGGAGACTAGTGATAAAGGGAGAGGCGGAGGTCAATGGAAACCTTTTAGTAGTAGGGTTAGGAGGAGTGCCTGCGATCCACTTGAAGAACAATGTTGTTCGACTTGATTGGTTAAGAGACACGTTTGAGACTGTACCCGAAGTTGTAGATGATGATACATTTGACCGTCATTCTTACAGTCCAGCAAAGTCTTACGGTCCTGCATTGCTCAGGCACAAAGAGAAGAACTACAAGCAGCACCTGGATCATCTTTGGGAAGACCAAAATCAGGTTACTTGGCAGCCTTATACGAGGCTTAGCGAGAACTTTCTCCCTGAAGAGATTAGGAGCCAACGACGGATGGGGAGGTTTCGGGGCATCTTGATTCACCCGTTTCACAGGCAGCCATCGTCCCGATCTTTGCCAAGTAAATTGGGGTTTAGAGAGGCCGATGTGACCCATTGTCTCCCCATGCTTGAAGATCGCAAAAGATTCCGAAATTGGCAGCATCATGTAAGAGAGTGGGAGAAGTTGGAGGATTGCTTTGTGATGAACCCAGATGAGCAAGATGGCGACCCCTCGGTGCAAGCGAACTCAGCTGAGCAAGCAGATGAGCAAGAGGGCGAGCCCTCGGTGCAAGGGAACCTGAGGGAAGGCAGACCCCAAAGGTTTTGTCAAAGGAAGAGAAGAAGGGTCAACGAACCAGTACTACAACAGCTTTATCGATCAGATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000138 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005795 GO:0005802 GO:0007275 GO:0007568 GO:0008150 GO:0010150 GO:0012505 GO:0016417 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019707 GO:0031323 GO:0031410 GO:0031982 GO:0031984 GO:0031985 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065007 GO:0090693 GO:0097708 GO:0098791 GO:0099402 GO:0140096 GO:1900055 GO:2000024 GO:2000026 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01110 map00100 map01100 map01110

Pfam Domains

Protein Families

DHHC

Protein Analysis

649

Amino Acids

74.63

Weight (kDa)

7.89

Isoelectric Point (pI)

44.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHHC	PF01529	123 - 248	3e-38	DHHC palmitoyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001459)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02840 FvH4_4g28291 FvH4_4g28291 FvH4_5g29581
malus_domestica	MD10G1009900.v1.1 MD13G1054400.v1.1
prunus_persica	Prupe.8G013700_v2.0.a1 Prupe.8G013700_v2.0.a1 Prupe.8G013900_v2.0.a1 Prupe.8G014000_v2.0.a1
pyrus_communis	pycom10g00610 pycom13g04830 pycom14g08210
rosa_laevigata	RLG00000013271
rosa_multiflora	Rmu_co8191550.1_g000001 Rmu_co8290979.1_g000001 Rmu_sc0000056.1_g000004 Rmu_sc0000834.1_g000019 Rmu_sc0004145.1_g000004 Rmu_sc0004145.1_g000014 Rmu_sc0008004.1_g000008 Rmu_sc0009291.1_g000008 Rmu_sc0042239.1_g000001 Rmu_ssc0000189.1_g000023 Rmu_ssc0000255.1_g000006
rosa_roxburghii	Rroxscaffold_5G00350480 Rroxscaffold_5G00350490
rosa_rugosa	Rorug01G0106300 Rorug01G0106300 Rorug01G0106400 Rorug01G0210200
rosa_samantha	Rh1AG123300 Rh1AG225300 Rh1BG097100 Rh1BG098700 Rh1BG193200 Rh1CG210100 Rh1DG128500 Rh1DG221500 Rh2AG598100 Rh2AG598200 Rh5BG336600 Rh6AG174000 Rh7AG329800 Rh7AG336300 Rh7AG336400 Rh7CG354000 Rh7CG354100 Rh7DG332600
rosa_wichuraiana	Rw0G011920 Rw1G019370 Rw6G014810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1031
AatII	GACGTC	1 cut(s)	1102
AccB7I	CCANNNNNTGG	2 cut(s)	27, 323
AccI	GTMKAC	1 cut(s)	1096
AciI	CCGC	4 cut(s)	58, 436, 937, 1259
AclWI	GGATC	6 cut(s)	73, 248, 261, 462, 1303, 1485
AcsI	RAATTY	4 cut(s)	332, 787, 1087, 1180
AcuI	CTGAAG	2 cut(s)	1208, 1569
AcyI	GRCGYC	1 cut(s)	1099
AfaI	GTAC	3 cut(s)	444, 1368, 1920
AfeI	AGCGCT	1 cut(s)	870
AfiI	CCNNNNNNNGG	3 cut(s)	27, 323, 1501
AflIII	ACRYGT	4 cut(s)	528, 1116, 1155, 1353
AgsI	TTSAA	8 cut(s)	40, 322, 400, 652, 794, 951, 1318, 1691
AhdI	GACNNNNNGTC	1 cut(s)	1674
AhlI	ACTAGT	1 cut(s)	1240
AjnI	CCWGG	4 cut(s)	604, 613, 873, 1473
AjuI	GAANNNNNNNTTGG	2 cut(s)	786, 818
AleI	CACNNNNGTG	1 cut(s)	462
AluBI	AGCT	7 cut(s)	17, 53, 311, 710, 817, 1811, 1930
AluI	AGCT	7 cut(s)	17, 53, 311, 710, 817, 1811, 1930
Alw21I	GWGCWC	1 cut(s)	1129
Alw26I	GTCTC	7 cut(s)	533, 884, 1014, 1231, 1344, 1355, 1682
AlwI	GGATC	6 cut(s)	73, 248, 261, 462, 1303, 1485
AlwNI	CAGNNNCTG	1 cut(s)	1474
Ama87I	CYCGRG	1 cut(s)	881
Aor51HI	AGCGCT	1 cut(s)	870
AoxI	GGCC	4 cut(s)	139, 281, 489, 1659
ApeKI	GCWGC	7 cut(s)	17, 565, 710, 1468, 1513, 1615, 1717
ApoI	RAATTY	4 cut(s)	332, 787, 1087, 1180
ArsI	GACNNNNNNTTYG	2 cut(s)	1870, 1902
Asp700I	GAANNNNTTC	1 cut(s)	35
AspLEI	GCGC	2 cut(s)	765, 871
AspS9I	GGNCC	6 cut(s)	140, 489, 618, 1024, 1033, 1430
AsuC2I	CCSGG	2 cut(s)	143, 258
AsuHPI	GGTGA	5 cut(s)	226, 449, 1094, 1163, 1592
AvaI	CYCGRG	1 cut(s)	881
AvaII	GGWCC	4 cut(s)	618, 1024, 1033, 1430
AxyI	CCTNAGG	2 cut(s)	900, 1859
BamHI	GGATCC	1 cut(s)	253
BanII	GRGCYC	2 cut(s)	71, 1842
BarI	GAAGNNNNNNTAC	2 cut(s)	585, 617
BbsI	GAAGAC	1 cut(s)	1497
Bbv12I	GWGCWC	1 cut(s)	1129
BbvI	GCAGC	7 cut(s)	4, 552, 697, 1480, 1525, 1627, 1729
BccI	CCATC	7 cut(s)	364, 423, 734, 898, 1567, 1627, 1775
BciT130I	CCWGG	4 cut(s)	606, 615, 875, 1475
BciVI	GTATCC	2 cut(s)	855, 897
BclI	TGATCA	1 cut(s)	1063
BcnI	CCSGG	2 cut(s)	143, 258
BcoDI	GTCTC	7 cut(s)	533, 884, 1014, 1231, 1344, 1355, 1682
BcuI	ACTAGT	1 cut(s)	1240
BfaI	CTAG	1 cut(s)	1241
BfmI	CTRYAG	1 cut(s)	965
BfoI	RGCGCY	2 cut(s)	766, 872
BfuI	GTATCC	2 cut(s)	855, 897
BglII	AGATCT	1 cut(s)	8
BisI	GCNGC	7 cut(s)	18, 566, 711, 1469, 1514, 1616, 1718
BlpI	GCTNAGC	2 cut(s)	1529, 1812
BlsI	GCNGC	7 cut(s)	19, 567, 712, 1470, 1515, 1617, 1719
BmcAI	AGTACT	1 cut(s)	1920
Bme1390I	CCNGG	6 cut(s)	143, 258, 606, 615, 875, 1475
Bme18I	GGWCC	4 cut(s)	618, 1024, 1033, 1430
BmeRI	GACNNNNNGTC	1 cut(s)	1674
BmeT110I	CYCGRG	1 cut(s)	881
BmgT120I	GGNCC	6 cut(s)	140, 489, 618, 1024, 1033, 1430
BmiI	GGNNCC	7 cut(s)	255, 490, 619, 620, 1034, 1562, 1856
BmrFI	CCNGG	6 cut(s)	143, 258, 606, 615, 875, 1475
BmsI	GCATC	3 cut(s)	207, 1599, 1729
BoxI	GACNNNNGTC	1 cut(s)	774
BpiI	GAAGAC	1 cut(s)	1497
BpmI	CTGGAG	2 cut(s)	33, 857
Bpu10I	CCTNAGC	1 cut(s)	1442
Bpu1102I	GCTNAGC	2 cut(s)	1529, 1812
BpuEI	CTTGAG	2 cut(s)	557, 1058
BpuMI	CCSGG	2 cut(s)	143, 258
Bsa29I	ATCGAT	1 cut(s)	1936
BsaHI	GRCGYC	1 cut(s)	1099
BsaI	GGTCTC	1 cut(s)	884
BsaJI	CCNNGG	8 cut(s)	21, 614, 702, 772, 874, 916, 1791, 1842
BsaWI	WCCGGW	1 cut(s)	372
BsaXI	ACNNNNNCTCC	2 cut(s)	855, 885
Bsc4I	CCNNNNNNNGG	3 cut(s)	27, 323, 1501
Bse1I	ACTGG	3 cut(s)	394, 827, 1916
Bse21I	CCTNAGG	2 cut(s)	900, 1859
Bse3DI	GCAATG	4 cut(s)	174, 418, 576, 1436
BseBI	CCWGG	4 cut(s)	606, 615, 875, 1475
BseCI	ATCGAT	1 cut(s)	1936
BseDI	CCNNGG	8 cut(s)	21, 614, 702, 772, 874, 916, 1791, 1842
BseGI	GGATG	3 cut(s)	828, 946, 1578
BseLI	CCNNNNNNNGG	3 cut(s)	27, 323, 1501
BseMI	GCAATG	4 cut(s)	174, 418, 576, 1436
BseMII	CTCAG	6 cut(s)	438, 891, 1456, 1803, 1821, 1850
BseNI	ACTGG	3 cut(s)	394, 827, 1916
BseRI	GAGGAG	1 cut(s)	1311
BseXI	GCAGC	7 cut(s)	4, 552, 697, 1480, 1525, 1627, 1729
BseYI	CCCAGC	1 cut(s)	676
BsgI	GTGCAG	1 cut(s)	31
BshFI	GGCC	4 cut(s)	141, 283, 491, 1661
BshVI	ATCGAT	1 cut(s)	1936
BsiHKAI	GWGCWC	1 cut(s)	1129
BsiHKCI	CYCGRG	1 cut(s)	881
BsiSI	CCGG	4 cut(s)	143, 258, 373, 382
BslFI	GGGAC	4 cut(s)	631, 820, 1066, 1609
BslI	CCNNNNNNNGG	3 cut(s)	27, 323, 1501
BsmAI	GTCTC	7 cut(s)	533, 884, 1014, 1231, 1344, 1355, 1682
BsmFI	GGGAC	4 cut(s)	631, 820, 1066, 1609
BsmI	GAATGC	1 cut(s)	581
BsnI	GGCC	4 cut(s)	141, 283, 491, 1661
Bso31I	GGTCTC	1 cut(s)	884
BsoBI	CYCGRG	1 cut(s)	881
Bsp1286I	GDGCHC	3 cut(s)	71, 1129, 1842
Bsp1720I	GCTNAGC	2 cut(s)	1529, 1812
Bsp19I	CCATGG	1 cut(s)	21
BspACI	CCGC	4 cut(s)	58, 436, 937, 1259
BspANI	GGCC	4 cut(s)	141, 283, 491, 1661
BspCNI	CTCAG	6 cut(s)	437, 892, 1455, 1804, 1820, 1851
BspDI	ATCGAT	1 cut(s)	1936
BspLI	GGNNCC	7 cut(s)	255, 490, 619, 620, 1034, 1562, 1856
BspPI	GGATC	6 cut(s)	73, 248, 261, 462, 1303, 1485
BspTNI	GGTCTC	1 cut(s)	884
BsrDI	GCAATG	4 cut(s)	174, 418, 576, 1436
BsrI	ACTGG	3 cut(s)	394, 827, 1916
BssECI	CCNNGG	8 cut(s)	21, 614, 702, 772, 874, 916, 1791, 1842
BssNI	GRCGYC	1 cut(s)	1099
BssT1I	CCWWGG	4 cut(s)	21, 702, 772, 916
Bst2UI	CCWGG	4 cut(s)	606, 615, 875, 1475
Bst4CI	ACNGT	7 cut(s)	121, 547, 982, 1366, 1400, 1412, 1430
Bst6I	CTCTTC	2 cut(s)	1545, 1889
BstACI	GRCGYC	1 cut(s)	1099
BstC8I	GCNNGC	7 cut(s)	285, 563, 674, 1305, 1800, 1818, 1838
BstDEI	CTNAG	9 cut(s)	424, 894, 900, 1002, 1442, 1529, 1807, 1812, 1859
BstDSI	CCRYGG	1 cut(s)	21
BstF5I	GGATG	3 cut(s)	828, 946, 1578
BstH2I	RGCGCY	2 cut(s)	766, 872
BstHHI	GCGC	2 cut(s)	765, 871
BstMAI	GTCTC	7 cut(s)	533, 884, 1014, 1231, 1344, 1355, 1682
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 152, 387, 420, 1808, 1817, 1846
BstNI	CCWGG	4 cut(s)	606, 615, 875, 1475
BstNSI	RCATGY	2 cut(s)	1120, 1159
BstPAI	GACNNNNGTC	1 cut(s)	774
BstSCI	CCNGG	6 cut(s)	141, 256, 604, 613, 873, 1473
BstSFI	CTRYAG	1 cut(s)	965
BstV1I	GCAGC	7 cut(s)	4, 552, 697, 1480, 1525, 1627, 1729
BstV2I	GAAGAC	1 cut(s)	1497
BstX2I	RGATCY	2 cut(s)	8, 253
BstXI	CCANNNNNNTGG	1 cut(s)	276
BstYI	RGATCY	2 cut(s)	8, 253
Bsu15I	ATCGAT	1 cut(s)	1936
Bsu36I	CCTNAGG	2 cut(s)	900, 1859
BsuI	GTATCC	2 cut(s)	855, 897
BsuRI	GGCC	4 cut(s)	141, 283, 491, 1661
BsuTUI	ATCGAT	1 cut(s)	1936
BtgI	CCRYGG	1 cut(s)	21
BtsCI	GGATG	3 cut(s)	828, 946, 1578
BtsIMutI	CAGTG	1 cut(s)	117
Cac8I	GCNNGC	7 cut(s)	285, 563, 674, 1305, 1800, 1818, 1838
CaiI	CAGNNNCTG	1 cut(s)	1474
CfoI	GCGC	2 cut(s)	765, 871
Cfr13I	GGNCC	6 cut(s)	140, 489, 618, 1024, 1033, 1430
ClaI	ATCGAT	1 cut(s)	1936
CseI	GACGC	1 cut(s)	947
Csp6I	GTAC	3 cut(s)	443, 1367, 1919
CviAII	CATG	8 cut(s)	22, 691, 1106, 1117, 1145, 1156, 1684, 1724
CviQI	GTAC	3 cut(s)	443, 1367, 1919
DdeI	CTNAG	9 cut(s)	424, 894, 900, 1002, 1442, 1529, 1807, 1812, 1859
DraI	TTTAAA	1 cut(s)	1165
DrdI	GACNNNNNNGTC	1 cut(s)	1031
DriI	GACNNNNNGTC	1 cut(s)	1674
DseDI	GACNNNNNNGTC	1 cut(s)	1031
Eam1104I	CTCTTC	2 cut(s)	1545, 1889
Eam1105I	GACNNNNNGTC	1 cut(s)	1674
EarI	CTCTTC	2 cut(s)	1545, 1889
EciI	GGCGGA	1 cut(s)	1274
Eco130I	CCWWGG	4 cut(s)	21, 702, 772, 916
Eco147I	AGGCCT	1 cut(s)	283
Eco24I	GRGCYC	2 cut(s)	71, 1842
Eco31I	GGTCTC	1 cut(s)	884
Eco47I	GGWCC	4 cut(s)	618, 1024, 1033, 1430
Eco47III	AGCGCT	1 cut(s)	870
Eco57I	CTGAAG	2 cut(s)	1208, 1569
Eco81I	CCTNAGG	2 cut(s)	900, 1859
Eco88I	CYCGRG	1 cut(s)	881
EcoO109I	RGGNCCY	3 cut(s)	489, 618, 1033
EcoRII	CCWGG	4 cut(s)	604, 613, 873, 1473
EcoT14I	CCWWGG	4 cut(s)	21, 702, 772, 916
EcoT22I	ATGCAT	2 cut(s)	6, 696
EcoT38I	GRGCYC	2 cut(s)	71, 1842
ErhI	CCWWGG	4 cut(s)	21, 702, 772, 916
FaeI	CATG	8 cut(s)	25, 694, 1109, 1120, 1148, 1159, 1687, 1727
FalI	AAGNNNNNCTT	2 cut(s)	1191, 1223
FaqI	GGGAC	4 cut(s)	631, 820, 1066, 1609
FatI	CATG	8 cut(s)	21, 690, 1105, 1116, 1144, 1155, 1683, 1723
FauI	CCCGC	2 cut(s)	51, 930
FbaI	TGATCA	1 cut(s)	1063
FblI	GTMKAC	1 cut(s)	1096
Fnu4HI	GCNGC	7 cut(s)	18, 566, 711, 1469, 1514, 1616, 1718
FokI	GGATG	3 cut(s)	815, 953, 1585
FriOI	GRGCYC	2 cut(s)	71, 1842
Fsp4HI	GCNGC	7 cut(s)	18, 566, 711, 1469, 1514, 1616, 1718
FspBI	CTAG	1 cut(s)	1241
GlaI	GCGC	2 cut(s)	764, 870
GluI	GCNGC	7 cut(s)	18, 566, 711, 1469, 1514, 1616, 1718
GsaI	CCCAGC	1 cut(s)	680
GsuI	CTGGAG	2 cut(s)	33, 857
HaeII	RGCGCY	2 cut(s)	766, 872
HaeIII	GGCC	4 cut(s)	141, 283, 491, 1661
HapII	CCGG	4 cut(s)	143, 258, 373, 382
HgaI	GACGC	1 cut(s)	947
HhaI	GCGC	2 cut(s)	765, 871
Hin1I	GRCGYC	1 cut(s)	1099
Hin1II	CATG	8 cut(s)	25, 694, 1109, 1120, 1148, 1159, 1687, 1727
Hin6I	GCGC	2 cut(s)	763, 869
HinP1I	GCGC	2 cut(s)	763, 869
HincII	GTYRAC	3 cut(s)	999, 1171, 1909
HindII	GTYRAC	3 cut(s)	999, 1171, 1909
HinfI	GANTC	5 cut(s)	167, 369, 652, 1597, 1704
HpaI	GTTAAC	1 cut(s)	999
HpaII	CCGG	4 cut(s)	143, 258, 373, 382
HphI	GGTGA	5 cut(s)	226, 449, 1094, 1163, 1592
Hpy166II	GTNNAC	6 cut(s)	443, 999, 1024, 1097, 1171, 1909
Hpy188I	TCNGA	6 cut(s)	331, 756, 844, 1179, 1709, 1942
Hpy188III	TCNNGA	5 cut(s)	12, 881, 908, 1594, 1626
Hpy8I	GTNNAC	6 cut(s)	443, 999, 1024, 1097, 1171, 1909
Hpy99I	CGWCG	2 cut(s)	861, 1572
HpyAV	CCTTC	4 cut(s)	587, 1226, 1859, 1896
HpyCH4III	ACNGT	7 cut(s)	121, 547, 982, 1366, 1400, 1412, 1430
HpyCH4IV	ACGT	5 cut(s)	110, 530, 1020, 1099, 1355
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 152, 387, 420, 1808, 1817, 1846
HpyF3I	CTNAG	9 cut(s)	424, 894, 900, 1002, 1442, 1529, 1807, 1812, 1859
HpySE526I	ACGT	5 cut(s)	110, 530, 1020, 1099, 1355
Hsp92I	GRCGYC	1 cut(s)	1099
Hsp92II	CATG	8 cut(s)	25, 694, 1109, 1120, 1148, 1159, 1687, 1727
HspAI	GCGC	2 cut(s)	763, 869
KflI	GGGWCCC	1 cut(s)	618
Ksp22I	TGATCA	1 cut(s)	1063
KspAI	GTTAAC	1 cut(s)	999
LmnI	GCTCC	3 cut(s)	14, 876, 1560
Lsp1109I	GCAGC	7 cut(s)	4, 552, 697, 1480, 1525, 1627, 1729
LweI	GCATC	3 cut(s)	207, 1599, 1729
MaeI	CTAG	1 cut(s)	1241
MaeII	ACGT	5 cut(s)	110, 530, 1020, 1099, 1355
MaeIII	GTNAC	7 cut(s)	106, 230, 550, 1100, 1151, 1504, 1666
MflI	RGATCY	2 cut(s)	8, 253
MhlI	GDGCHC	3 cut(s)	71, 1129, 1842
MlyI	GAGTC	1 cut(s)	378
MmeI	TCCRAC	1 cut(s)	1725
Mph1103I	ATGCAT	2 cut(s)	6, 696
MroXI	GAANNNNTTC	1 cut(s)	35
MseI	TTAA	8 cut(s)	477, 494, 668, 998, 1046, 1121, 1164, 1346
MslI	CAYNNNNRTG	2 cut(s)	462, 1149
MspA1I	CMGCKG	1 cut(s)	1811
MspI	CCGG	4 cut(s)	143, 258, 373, 382
MspR9I	CCNGG	6 cut(s)	143, 258, 606, 615, 875, 1475
Mva1269I	GAATGC	1 cut(s)	581
MvaI	CCWGG	4 cut(s)	606, 615, 875, 1475
MwoI	GCNNNNNNNGC	7 cut(s)	23, 152, 387, 420, 1808, 1817, 1846
NciI	CCSGG	2 cut(s)	143, 258
NcoI	CCATGG	1 cut(s)	21
NlaIII	CATG	8 cut(s)	25, 694, 1109, 1120, 1148, 1159, 1687, 1727
NlaIV	GGNNCC	7 cut(s)	255, 490, 619, 620, 1034, 1562, 1856
NmuCI	GTSAC	4 cut(s)	106, 1100, 1151, 1666
NsiI	ATGCAT	2 cut(s)	6, 696
NspI	RCATGY	2 cut(s)	1120, 1159
OliI	CACNNNNGTG	1 cut(s)	462
PaeR7I	CTCGAG	1 cut(s)	881
PceI	AGGCCT	1 cut(s)	283
PciI	ACATGT	2 cut(s)	1116, 1155
PcsI	WCGNNNNNNNCGW	1 cut(s)	1799
PctI	GAATGC	1 cut(s)	581
PdmI	GAANNNNTTC	1 cut(s)	35
PfeI	GAWTC	4 cut(s)	167, 652, 1597, 1704
PflMI	CCANNNNNTGG	2 cut(s)	27, 323
PkrI	GCNGC	7 cut(s)	19, 567, 712, 1470, 1515, 1617, 1719
PleI	GAGTC	1 cut(s)	377
PpsI	GAGTC	1 cut(s)	377
PpuMI	RGGWCCY	2 cut(s)	618, 1033
PscI	ACATGT	2 cut(s)	1116, 1155
PshAI	GACNNNNGTC	1 cut(s)	774
Psp5II	RGGWCCY	2 cut(s)	618, 1033
Psp6I	CCWGG	4 cut(s)	604, 613, 873, 1473
PspFI	CCCAGC	1 cut(s)	676
PspGI	CCWGG	4 cut(s)	604, 613, 873, 1473
PspN4I	GGNNCC	7 cut(s)	255, 490, 619, 620, 1034, 1562, 1856
PspPI	GGNCC	6 cut(s)	140, 489, 618, 1024, 1033, 1430
PspPPI	RGGWCCY	2 cut(s)	618, 1033
PsrI	GAACNNNNNNTAC	2 cut(s)	1905, 1937
PstNI	CAGNNNCTG	1 cut(s)	1474
PsuI	RGATCY	2 cut(s)	8, 253
PvuII	CAGCTG	1 cut(s)	1811
RsaI	GTAC	3 cut(s)	444, 1368, 1920
RsaNI	GTAC	3 cut(s)	443, 1367, 1919
RseI	CAYNNNNRTG	2 cut(s)	462, 1149
SaqAI	TTAA	8 cut(s)	477, 494, 668, 998, 1046, 1121, 1164, 1346
SatI	GCNGC	7 cut(s)	18, 566, 711, 1469, 1514, 1616, 1718
Sau96I	GGNCC	6 cut(s)	140, 489, 618, 1024, 1033, 1430
ScaI	AGTACT	1 cut(s)	1920
SchI	GAGTC	1 cut(s)	378
ScrFI	CCNGG	6 cut(s)	143, 258, 606, 615, 875, 1475
SduI	GDGCHC	3 cut(s)	71, 1129, 1842
SfaNI	GCATC	3 cut(s)	207, 1599, 1729
SfcI	CTRYAG	1 cut(s)	965
Sfr274I	CTCGAG	1 cut(s)	881
SinI	GGWCC	4 cut(s)	618, 1024, 1033, 1430
SlaI	CTCGAG	1 cut(s)	881
SmiMI	CAYNNNNRTG	2 cut(s)	462, 1149
SmlI	CTYRAG	3 cut(s)	536, 881, 1037
SmoI	CTYRAG	3 cut(s)	536, 881, 1037
SpeI	ACTAGT	1 cut(s)	1240
SseBI	AGGCCT	1 cut(s)	283
SsiI	CCGC	4 cut(s)	58, 436, 937, 1259
SspI	AATATT	1 cut(s)	506
SspMI	CTAG	1 cut(s)	1241
StuI	AGGCCT	1 cut(s)	283
StyD4I	CCNGG	6 cut(s)	141, 256, 604, 613, 873, 1473
StyI	CCWWGG	4 cut(s)	21, 702, 772, 916
TaaI	ACNGT	7 cut(s)	121, 547, 982, 1366, 1400, 1412, 1430
TaiI	ACGT	5 cut(s)	113, 533, 1023, 1102, 1358
TaqI	TCGA	5 cut(s)	729, 778, 882, 1333, 1936
TatI	WGTACW	2 cut(s)	442, 1918
TfiI	GAWTC	4 cut(s)	167, 652, 1597, 1704
Tru1I	TTAA	8 cut(s)	477, 494, 668, 998, 1046, 1121, 1164, 1346
Tru9I	TTAA	8 cut(s)	477, 494, 668, 998, 1046, 1121, 1164, 1346
TscAI	CASTG	1 cut(s)	124
TseFI	GTSAC	4 cut(s)	106, 1100, 1151, 1666
TseI	GCWGC	7 cut(s)	17, 565, 710, 1468, 1513, 1615, 1717
Tsp45I	GTSAC	4 cut(s)	106, 1100, 1151, 1666
TspDTI	ATGAA	4 cut(s)	309, 565, 817, 1778
TspGWI	ACGGA	3 cut(s)	266, 874, 1585
TspRI	CASTG	1 cut(s)	124
Van91I	CCANNNNNTGG	2 cut(s)	27, 323
VpaK11BI	GGWCC	4 cut(s)	618, 1024, 1033, 1430
XapI	RAATTY	4 cut(s)	332, 787, 1087, 1180
XceI	RCATGY	2 cut(s)	1120, 1159
XhoI	CTCGAG	1 cut(s)	881
XmiI	GTMKAC	1 cut(s)	1096
XmnI	GAANNNNTTC	1 cut(s)	35
XspI	CTAG	1 cut(s)	1241
ZraI	GACGTC	1 cut(s)	1100
ZrmI	AGTACT	1 cut(s)	1920
Zsp2I	ATGCAT	2 cut(s)	6, 696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.