Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001459

Physical Location & Seq

Genomic Coordinates Forward (+)

19057614 .. 19062099

Gene Structure 4486 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0106300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGCAAGATCATGTGCCACAAGTGATGAAAAGAGAGAAGAAGTGGTGGGGGTGGCAATAGACAAGGACAAGGGAAGTCAATACGCTCTCAAATGGACTGTCGAGCATCTTCTTGTCAAGGGCCAAAGTCTCACCCTTGTGCATGTTAAACAATCAACACCAGGCCTTCCCAATCAAACTGAGAAATCGGTTTCTGGCTCTGAATTAAAGGAGGAAGGTATAAAATTGTGCAAAAGCCAATCTGATGCTGAATATAGCGAGTTGTTTCTTCCACTTCGTACTTTTTGTAAGAAAAAGCTTGTAAGATACAACGAAGTAATAGTTAAAGGTACTGATGTAGCAAAAGCACTCGTCAATTTTATATCGACACATTCAATTGAGGTTTTGGTACTTGCGGCACCTTCAAAAAGTGGCTTTTTCAGAGCCTTCAACAAAACTACAGACATTCCAAGCAGAGTGTCGAAAGGGGCACCGGATTTCTGCACTGTGTATGTCATTGGCAAGGGAAAGATCAGTCATGTGCAAACAGCAACCACTAAATTACCCCCAGAAGCTCGTAATAAGCAAATACATAACCAACTCAGCAATGTTTCGGACTCAAGTGTTTCTCAATTCATGAGTAACCAGCAACCCAGAGCATCAGAGAGGACAAGAACAAAGTACCGGCACCGTAGCGCTCGGATAGATCATGATACAGGAATCAAGACACCATTCACCAGAGGACAAGCTTCATCAAACAGATTATATGAGATCTCACCAGACAGCGATGTATCATTCACAAGTAGTGGAGGAAGACCAAGCATTGATCACATGTTTCCTTCTATATGCGGCAGTGTGGAATCAGGAATGCACTCTCAACAATCATTCAACTCAGACGACAGAAGATCTACCGCCAAGCAATCCTACTCAAGAACCCAGTTCATTGATATGAACTCCTCATTATCCTCAACTGAGAGTGGAAAATCATGGTCATCCCGAAATATGGAAGAAGTAGAAGATGAGATGATGAGACTCAAGCTAGAGCTCAAGCAGACAATGGAGGTGTACAATACGGCCTGTAAGGAAACCCTAACATCAAAACAGAAGCAACTTGACCGATGGAAATGGGAAGAAGAACGAAGATTGGAAAGGGCACACCTAGGTCAGGAGTTTGCATTGGCACTTGTACAGAAAGAGGAAGCAAAATGTAGGGCAGCAATGGACGCAGAAAGAGCAGCTAAAAGGATTGCTGAATTGGAAGCAGAACAAAGGAGGAATTCAGAAATAAAGGGTCTGAAAGAAGCTGAAAAGAGGACGAACTCACTAGGAGGAAGGAGTTTTGATCCGCGGTACAGGAAATACACAATTGAAGAGATTAAAGCAGCAACTAACAGTTTTTCAAAAGCTCTCAAGATTGGAGAAGGTGGCTATGGGCCTGTTTATGTGGGTGAGCTGGACCACACACAAGTGGCAATAAAAGCTCTACGTCCAGATGCAGCTCAAGGACGTTCACAGTTCCAACAAGAGATTGAAGTTTTGAGCTGCATAAGACATCCAAACATGGTTCTCCTGCTTGGAGCCTGCCCAGAGTATGGTTGTCTGATTTATGAGTACATGGGTAATGGGAGCTTAGAAGACCGTCTGTTTCGACGAGGTAACACCCCAGTTATTCCATGGCAGCTAAGGTTCCGAATCGCTGCAGAAATTGCCACAGGGCTTTTGTTCCTTCACCAGGCCAAGCCAGAACCGTTTGTACACCGTGACTTAAAGCCAGGAAACATTTTGCTAGACTATAACTATGTCAGCAAGATCAGTGATGTAGGTCTGGCCAGGCTTGTCCCTCCATCAGTAGCTGACTCAGTCACTCAGTATCACATGACATCAGCAGCTGGGACATTCTGTTATATCGACCCAGAATATCAACAAACTGGCTTGCTTGGAACAAAATCTGATATCTACTCACTTGGGGTCATGCTTCTACAAATAATAACAGCCAAACCAGCAATGGGTTTGACTCATCTTGTTGAGCACGCGATTGAGATAGGGACCTTCGCTGAGATGCTTGACCCCGCTGTTCCTGACTGGCCTGTGGAGGAAGCCTTGAAGTTTGCCAAGTTAGCATTACAATGTGCCGAAATGAGGCGAAAAGACAGACCCGATCTTGGCAAGGTAGTGCTACCTGAGCTTAACAGATTGAGAGAACTCGGCGAAAAGGGTGGCATGCTTAATGGTGGTGGAGCATTCTTACTACAAAAGTGCTCAGTTTCCACAAAGCAAGAAGTGATGAATGACCCCCAATCTGGATATGCCAGTTCAGTGAGCAATTCGAGCACATCATCTTATGGAGGAAGAATATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009637 GO:0009785 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0030522 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04922 map04010 map04922

Pfam Domains

Protein Families

Metallophos PMD

Protein Analysis

779

Amino Acids

86.77

Weight (kDa)

8.82

Isoelectric Point (pI)

48.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	461 - 712	6.2e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	464 - 717	1.5e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001459)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02840 FvH4_4g28291 FvH4_4g28291 FvH4_5g29581
malus_domestica	MD10G1009900.v1.1 MD13G1054400.v1.1
prunus_persica	Prupe.8G013700_v2.0.a1 Prupe.8G013700_v2.0.a1 Prupe.8G013900_v2.0.a1 Prupe.8G014000_v2.0.a1
pyrus_communis	pycom10g00610 pycom13g04830 pycom14g08210
rosa_laevigata	RLG00000013271
rosa_multiflora	Rmu_co8191550.1_g000001 Rmu_co8290979.1_g000001 Rmu_sc0000056.1_g000004 Rmu_sc0000834.1_g000019 Rmu_sc0004145.1_g000004 Rmu_sc0004145.1_g000014 Rmu_sc0008004.1_g000008 Rmu_sc0009291.1_g000008 Rmu_sc0042239.1_g000001 Rmu_ssc0000189.1_g000023 Rmu_ssc0000255.1_g000006
rosa_roxburghii	Rroxscaffold_5G00350480 Rroxscaffold_5G00350490
rosa_rugosa	Rorug01G0106300 Rorug01G0106300 Rorug01G0106400 Rorug01G0210200
rosa_samantha	Rh1AG123300 Rh1AG225300 Rh1BG097100 Rh1BG098700 Rh1BG193200 Rh1CG210100 Rh1DG128500 Rh1DG221500 Rh2AG598100 Rh2AG598200 Rh5BG336600 Rh6AG174000 Rh7AG329800 Rh7AG336300 Rh7AG336400 Rh7CG354000 Rh7CG354100 Rh7DG332600
rosa_wichuraiana	Rw0G011920 Rw1G019370 Rw6G014810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	397, 469, 666
AccB7I	CCANNNNNTGG	1 cut(s)	1571
AccII	CGCG	2 cut(s)	1327, 2012
AciI	CCGC	6 cut(s)	395, 828, 891, 1325, 1327, 2049
AclWI	GGATC	1 cut(s)	1316
AcoI	YGGCCR	1 cut(s)	1806
AcsI	RAATTY	1 cut(s)	1255
AfaI	GTAC	9 cut(s)	280, 331, 390, 662, 1046, 1167, 1331, 1592, 1734
AfeI	AGCGCT	1 cut(s)	676
AfiI	CCNNNNNNNGG	8 cut(s)	982, 1144, 1571, 1711, 1985, 2118, 2141, 2279
AflIII	ACRYGT	1 cut(s)	810
AgsI	TTSAA	8 cut(s)	375, 405, 430, 868, 1349, 1380, 1511, 2083
AjnI	CCWGG	4 cut(s)	160, 1710, 1750, 1808
AleI	CACNNNNGTG	2 cut(s)	137, 1445
Alw21I	GWGCWC	4 cut(s)	1026, 2010, 2240, 2312
Alw26I	GTCTC	2 cut(s)	134, 1003
AlwI	GGATC	1 cut(s)	1316
AlwNI	CAGNNNCTG	2 cut(s)	1832, 1868
Aor51HI	AGCGCT	1 cut(s)	676
AoxI	GGCC	7 cut(s)	121, 163, 1053, 1412, 1713, 1806, 2063
ApeKI	GCWGC	8 cut(s)	1193, 1214, 1361, 1475, 1521, 1657, 1676, 1865
ApoI	RAATTY	1 cut(s)	1255
ArsI	GACNNNNNNTTYG	2 cut(s)	84, 116
AspA2I	CCTAGG	1 cut(s)	1138
AspLEI	GCGC	1 cut(s)	677
AspS9I	GGNCC	4 cut(s)	121, 1412, 1435, 2025
AsuHPI	GGTGA	5 cut(s)	124, 706, 747, 1439, 1700
AvaII	GGWCC	2 cut(s)	1435, 2025
AvrII	CCTAGG	1 cut(s)	1138
BaeGI	GKGCMC	2 cut(s)	472, 1135
BaeI	ACNNNNGTAYC	2 cut(s)	321, 354
BalI	TGGCCA	1 cut(s)	1808
BanI	GGYRCC	3 cut(s)	397, 469, 666
BanII	GRGCYC	1 cut(s)	1026
BbsI	GAAGAC	2 cut(s)	799, 1620
Bbv12I	GWGCWC	4 cut(s)	1026, 2010, 2240, 2312
BbvI	GCAGC	8 cut(s)	1205, 1226, 1373, 1487, 1508, 1663, 1669, 1877
BccI	CCATC	2 cut(s)	1092, 1831
BceAI	ACGGC	1 cut(s)	1068
BciT130I	CCWGG	4 cut(s)	162, 1712, 1752, 1810
BclI	TGATCA	1 cut(s)	805
BcoDI	GTCTC	2 cut(s)	134, 1003
BfaI	CTAG	4 cut(s)	1019, 1139, 1304, 1766
BfmI	CTRYAG	2 cut(s)	438, 1677
BfoI	RGCGCY	1 cut(s)	678
BglII	AGATCT	2 cut(s)	750, 884
BlnI	CCTAGG	1 cut(s)	1138
Bme1390I	CCNGG	4 cut(s)	162, 1712, 1752, 1810
Bme18I	GGWCC	2 cut(s)	1435, 2025
BmgT120I	GGNCC	4 cut(s)	121, 1412, 1435, 2025
BmiI	GGNNCC	6 cut(s)	399, 471, 668, 1558, 1667, 2026
BmrFI	CCNGG	4 cut(s)	162, 1712, 1752, 1810
BmrI	ACTGGG	2 cut(s)	910, 1637
BmsI	GCATC	5 cut(s)	115, 235, 647, 1462, 2028
BmuI	ACTGGG	2 cut(s)	910, 1637
BpiI	GAAGAC	2 cut(s)	799, 1620
Bpu10I	CCTNAGC	2 cut(s)	1661, 2160
BpuEI	CTTGAG	6 cut(s)	583, 892, 998, 1010, 1373, 1464
BsaJI	CCNNGG	3 cut(s)	1138, 1325, 1652
BsaWI	WCCGGW	1 cut(s)	472
Bsc4I	CCNNNNNNNGG	8 cut(s)	982, 1144, 1571, 1711, 1985, 2118, 2141, 2279
Bse118I	RCCGGY	1 cut(s)	663
Bse1I	ACTGG	5 cut(s)	916, 1643, 1912, 2066, 2289
Bse3DI	GCAATG	3 cut(s)	592, 1203, 1989
BseBI	CCWGG	4 cut(s)	162, 1712, 1752, 1810
BseDI	CCNNGG	3 cut(s)	1138, 1325, 1652
BseGI	GGATG	2 cut(s)	971, 1531
BseLI	CCNNNNNNNGG	8 cut(s)	982, 1144, 1571, 1711, 1985, 2118, 2141, 2279
BseMI	GCAATG	3 cut(s)	592, 1203, 1989
BseMII	CTCAG	9 cut(s)	171, 595, 885, 942, 1851, 1859, 2025, 2151, 2253
BseNI	ACTGG	5 cut(s)	916, 1643, 1912, 2066, 2289
BseRI	GAGGAG	1 cut(s)	925
BseSI	GKGCMC	2 cut(s)	472, 1135
BseXI	GCAGC	8 cut(s)	1205, 1226, 1373, 1487, 1508, 1663, 1669, 1877
BseYI	CCCAGC	1 cut(s)	1868
BsgI	GTGCAG	1 cut(s)	466
Bsh1236I	CGCG	2 cut(s)	1327, 2012
BshFI	GGCC	7 cut(s)	123, 165, 1055, 1414, 1715, 1808, 2065
BshNI	GGYRCC	3 cut(s)	397, 469, 666
BsiHKAI	GWGCWC	4 cut(s)	1026, 2010, 2240, 2312
BsiSI	CCGG	2 cut(s)	473, 664
BslFI	GGGAC	3 cut(s)	1802, 1885, 2038
BslI	CCNNNNNNNGG	8 cut(s)	982, 1144, 1571, 1711, 1985, 2118, 2141, 2279
BsmAI	GTCTC	2 cut(s)	134, 1003
BsmFI	GGGAC	3 cut(s)	1802, 1885, 2038
BsmI	GAATGC	2 cut(s)	852, 2219
BsnI	GGCC	7 cut(s)	123, 165, 1055, 1414, 1715, 1808, 2065
Bsp1286I	GDGCHC	6 cut(s)	472, 1026, 1135, 2010, 2240, 2312
Bsp1407I	TGTACA	3 cut(s)	1044, 1165, 1732
Bsp143I	GATC	9 cut(s)	8, 510, 685, 750, 805, 884, 1321, 1788, 2137
Bsp19I	CCATGG	1 cut(s)	1652
BspACI	CCGC	6 cut(s)	395, 828, 891, 1325, 1327, 2049
BspANI	GGCC	7 cut(s)	123, 165, 1055, 1414, 1715, 1808, 2065
BspCNI	CTCAG	9 cut(s)	172, 594, 884, 943, 1850, 1858, 2026, 2152, 2252
BspFNI	CGCG	2 cut(s)	1327, 2012
BspHI	TCATGA	2 cut(s)	615, 688
BspLI	GGNNCC	6 cut(s)	399, 471, 668, 1558, 1667, 2026
BspMAI	CTGCAG	1 cut(s)	1681
BspPI	GGATC	1 cut(s)	1316
BspT107I	GGYRCC	3 cut(s)	397, 469, 666
BsrDI	GCAATG	3 cut(s)	592, 1203, 1989
BsrFI	RCCGGY	1 cut(s)	663
BsrGI	TGTACA	3 cut(s)	1044, 1165, 1732
BsrI	ACTGG	5 cut(s)	916, 1643, 1912, 2066, 2289
BssAI	RCCGGY	1 cut(s)	663
BssECI	CCNNGG	3 cut(s)	1138, 1325, 1652
BssMI	GATC	9 cut(s)	8, 510, 685, 750, 805, 884, 1321, 1788, 2137
BssT1I	CCWWGG	2 cut(s)	1138, 1652
Bst2UI	CCWGG	4 cut(s)	162, 1712, 1752, 1810
Bst4CI	ACNGT	8 cut(s)	100, 487, 671, 1373, 1494, 1619, 1728, 1739
Bst6I	CTCTTC	1 cut(s)	1344
BstAPI	GCANNNNNTGC	1 cut(s)	1685
BstAUI	TGTACA	3 cut(s)	1044, 1165, 1732
BstC8I	GCNNGC	4 cut(s)	1561, 1913, 2010, 2201
BstDSI	CCRYGG	2 cut(s)	1325, 1652
BstENI	CCTNNNNNAGG	2 cut(s)	1142, 1709
BstF5I	GGATG	2 cut(s)	971, 1531
BstFNI	CGCG	2 cut(s)	1327, 2012
BstH2I	RGCGCY	1 cut(s)	678
BstHHI	GCGC	1 cut(s)	677
BstKTI	GATC	9 cut(s)	11, 513, 688, 753, 808, 887, 1324, 1791, 2140
BstMAI	GTCTC	2 cut(s)	134, 1003
BstMBI	GATC	9 cut(s)	8, 510, 685, 750, 805, 884, 1321, 1788, 2137
BstMWI	GCNNNNNNNGC	8 cut(s)	1202, 1211, 1457, 1685, 1979, 2096, 2161, 2307
BstNI	CCWGG	4 cut(s)	162, 1712, 1752, 1810
BstNSI	RCATGY	3 cut(s)	146, 814, 2203
BstSCI	CCNGG	4 cut(s)	160, 1710, 1750, 1808
BstSFI	CTRYAG	2 cut(s)	438, 1677
BstSLI	GKGCMC	2 cut(s)	472, 1135
BstUI	CGCG	2 cut(s)	1327, 2012
BstV1I	GCAGC	8 cut(s)	1205, 1226, 1373, 1487, 1508, 1663, 1669, 1877
BstV2I	GAAGAC	2 cut(s)	799, 1620
BstX2I	RGATCY	2 cut(s)	750, 884
BstYI	RGATCY	2 cut(s)	750, 884
BsuRI	GGCC	7 cut(s)	123, 165, 1055, 1414, 1715, 1808, 2065
BtgI	CCRYGG	2 cut(s)	1325, 1652
BtgZI	GCGATG	1 cut(s)	780
BtsCI	GGATG	2 cut(s)	971, 1531
BtsI	GCAGTG	1 cut(s)	838
BtsIMutI	CAGTG	4 cut(s)	483, 838, 1798, 2301
Cac8I	GCNNGC	4 cut(s)	1561, 1913, 2010, 2201
CaiI	CAGNNNCTG	2 cut(s)	1832, 1868
CciI	TCATGA	2 cut(s)	615, 688
CfoI	GCGC	1 cut(s)	677
Cfr10I	RCCGGY	1 cut(s)	663
Cfr13I	GGNCC	4 cut(s)	121, 1412, 1435, 2025
Cfr42I	CCGCGG	1 cut(s)	1328
CseI	GACGC	1 cut(s)	1211
Csp6I	GTAC	9 cut(s)	279, 330, 389, 661, 1045, 1166, 1330, 1591, 1733
CviQI	GTAC	9 cut(s)	279, 330, 389, 661, 1045, 1166, 1330, 1591, 1733
DpnI	GATC	9 cut(s)	10, 512, 687, 752, 807, 886, 1323, 1790, 2139
DpnII	GATC	9 cut(s)	8, 510, 685, 750, 805, 884, 1321, 1788, 2137
EaeI	YGGCCR	1 cut(s)	1806
Eam1104I	CTCTTC	1 cut(s)	1344
EarI	CTCTTC	1 cut(s)	1344
Ecl136II	GAGCTC	1 cut(s)	1024
Eco130I	CCWWGG	2 cut(s)	1138, 1652
Eco147I	AGGCCT	1 cut(s)	165
Eco24I	GRGCYC	1 cut(s)	1026
Eco32I	GATATC	1 cut(s)	1933
Eco47I	GGWCC	2 cut(s)	1435, 2025
Eco47III	AGCGCT	1 cut(s)	676
Eco53kI	GAGCTC	1 cut(s)	1024
EcoICRI	GAGCTC	1 cut(s)	1024
EcoNI	CCTNNNNNAGG	2 cut(s)	1142, 1709
EcoO109I	RGGNCCY	1 cut(s)	2025
EcoRI	GAATTC	1 cut(s)	1255
EcoRII	CCWGG	4 cut(s)	160, 1710, 1750, 1808
EcoRV	GATATC	1 cut(s)	1933
EcoT14I	CCWWGG	2 cut(s)	1138, 1652
EcoT38I	GRGCYC	1 cut(s)	1026
ErhI	CCWWGG	2 cut(s)	1138, 1652
FaqI	GGGAC	3 cut(s)	1802, 1885, 2038
FauI	CCCGC	1 cut(s)	2056
FbaI	TGATCA	1 cut(s)	805
FokI	GGATG	2 cut(s)	958, 1518
FriOI	GRGCYC	1 cut(s)	1026
FspBI	CTAG	4 cut(s)	1019, 1139, 1304, 1766
GlaI	GCGC	1 cut(s)	676
GsaI	CCCAGC	1 cut(s)	1872
HaeII	RGCGCY	1 cut(s)	678
HaeIII	GGCC	7 cut(s)	123, 165, 1055, 1414, 1715, 1808, 2065
HapII	CCGG	2 cut(s)	473, 664
HgaI	GACGC	1 cut(s)	1211
HhaI	GCGC	1 cut(s)	677
Hin6I	GCGC	1 cut(s)	675
HinP1I	GCGC	1 cut(s)	675
HindIII	AAGCTT	2 cut(s)	296, 726
HinfI	GANTC	7 cut(s)	596, 699, 839, 1011, 1671, 1835, 1993
HpaII	CCGG	2 cut(s)	473, 664
HphI	GGTGA	5 cut(s)	124, 706, 747, 1439, 1700
Hpy166II	GTNNAC	3 cut(s)	1045, 1490, 1735
Hpy8I	GTNNAC	3 cut(s)	1045, 1490, 1735
Hpy99I	CGWCG	1 cut(s)	1632
HpyAV	CCTTC	9 cut(s)	176, 209, 411, 436, 828, 1305, 1394, 1715, 2038
HpyCH4III	ACNGT	8 cut(s)	100, 487, 671, 1373, 1494, 1619, 1728, 1739
HpyCH4IV	ACGT	2 cut(s)	1465, 1486
HpyCH4V	TGCA	9 cut(s)	142, 231, 483, 523, 850, 1154, 1475, 1524, 1679
HpyF10VI	GCNNNNNNNGC	8 cut(s)	1202, 1211, 1457, 1685, 1979, 2096, 2161, 2307
HpySE526I	ACGT	2 cut(s)	1465, 1486
HspAI	GCGC	1 cut(s)	675
Ksp22I	TGATCA	1 cut(s)	805
KspI	CCGCGG	1 cut(s)	1328
Kzo9I	GATC	9 cut(s)	8, 510, 685, 750, 805, 884, 1321, 1788, 2137
LmnI	GCTCC	3 cut(s)	1556, 1605, 2216
Lsp1109I	GCAGC	8 cut(s)	1205, 1226, 1373, 1487, 1508, 1663, 1669, 1877
LweI	GCATC	5 cut(s)	115, 235, 647, 1462, 2028
MaeI	CTAG	4 cut(s)	1019, 1139, 1304, 1766
MaeII	ACGT	2 cut(s)	1465, 1486
MaeIII	GTNAC	4 cut(s)	620, 1634, 1739, 1840
MalI	GATC	9 cut(s)	10, 512, 687, 752, 807, 886, 1323, 1790, 2139
MboI	GATC	9 cut(s)	8, 510, 685, 750, 805, 884, 1321, 1788, 2137
MfeI	CAATTG	2 cut(s)	375, 1344
MflI	RGATCY	2 cut(s)	750, 884
MhlI	GDGCHC	6 cut(s)	472, 1026, 1135, 2010, 2240, 2312
MlsI	TGGCCA	1 cut(s)	1808
MluNI	TGGCCA	1 cut(s)	1808
MlyI	GAGTC	4 cut(s)	590, 1005, 1829, 1987
MmeI	TCCRAC	1 cut(s)	1522
Mox20I	TGGCCA	1 cut(s)	1808
MscI	TGGCCA	1 cut(s)	1808
MseI	TTAA	7 cut(s)	147, 206, 324, 1356, 1745, 2166, 2205
MslI	CAYNNNNRTG	4 cut(s)	137, 926, 1445, 2104
Msp20I	TGGCCA	1 cut(s)	1808
MspA1I	CMGCKG	3 cut(s)	1327, 1868, 2051
MspI	CCGG	2 cut(s)	473, 664
MspR9I	CCNGG	4 cut(s)	162, 1712, 1752, 1810
MunI	CAATTG	2 cut(s)	375, 1344
Mva1269I	GAATGC	2 cut(s)	852, 2219
MvaI	CCWGG	4 cut(s)	162, 1712, 1752, 1810
MvnI	CGCG	2 cut(s)	1327, 2012
MwoI	GCNNNNNNNGC	8 cut(s)	1202, 1211, 1457, 1685, 1979, 2096, 2161, 2307
NcoI	CCATGG	1 cut(s)	1652
NdeII	GATC	9 cut(s)	8, 510, 685, 750, 805, 884, 1321, 1788, 2137
NlaIV	GGNNCC	6 cut(s)	399, 471, 668, 1558, 1667, 2026
NmeAIII	GCCGAG	1 cut(s)	2163
NmuCI	GTSAC	2 cut(s)	1739, 1840
NspI	RCATGY	3 cut(s)	146, 814, 2203
OliI	CACNNNNGTG	2 cut(s)	137, 1445
PaeI	GCATGC	1 cut(s)	2203
PagI	TCATGA	2 cut(s)	615, 688
PceI	AGGCCT	1 cut(s)	165
PciI	ACATGT	1 cut(s)	810
PctI	GAATGC	2 cut(s)	852, 2219
PfeI	GAWTC	3 cut(s)	699, 839, 1671
PflFI	GACNNNGTC	1 cut(s)	1838
PflMI	CCANNNNNTGG	1 cut(s)	1571
PleI	GAGTC	4 cut(s)	590, 1005, 1829, 1987
PpsI	GAGTC	4 cut(s)	590, 1005, 1829, 1987
PpuMI	RGGWCCY	1 cut(s)	2025
PscI	ACATGT	1 cut(s)	810
Psp124BI	GAGCTC	1 cut(s)	1026
Psp5II	RGGWCCY	1 cut(s)	2025
Psp6I	CCWGG	4 cut(s)	160, 1710, 1750, 1808
PspFI	CCCAGC	1 cut(s)	1868
PspGI	CCWGG	4 cut(s)	160, 1710, 1750, 1808
PspN4I	GGNNCC	6 cut(s)	399, 471, 668, 1558, 1667, 2026
PspPI	GGNCC	4 cut(s)	121, 1412, 1435, 2025
PspPPI	RGGWCCY	1 cut(s)	2025
PsrI	GAACNNNNNNTAC	2 cut(s)	1716, 1748
PstI	CTGCAG	1 cut(s)	1681
PstNI	CAGNNNCTG	2 cut(s)	1832, 1868
PsuI	RGATCY	2 cut(s)	750, 884
PsyI	GACNNNGTC	1 cut(s)	1838
PvuII	CAGCTG	1 cut(s)	1868
RsaI	GTAC	9 cut(s)	280, 331, 390, 662, 1046, 1167, 1331, 1592, 1734
RsaNI	GTAC	9 cut(s)	279, 330, 389, 661, 1045, 1166, 1330, 1591, 1733
RseI	CAYNNNNRTG	4 cut(s)	137, 926, 1445, 2104
SacI	GAGCTC	1 cut(s)	1026
SacII	CCGCGG	1 cut(s)	1328
SaqAI	TTAA	7 cut(s)	147, 206, 324, 1356, 1745, 2166, 2205
Sau3AI	GATC	9 cut(s)	8, 510, 685, 750, 805, 884, 1321, 1788, 2137
Sau96I	GGNCC	4 cut(s)	121, 1412, 1435, 2025
SchI	GAGTC	4 cut(s)	590, 1005, 1829, 1987
ScrFI	CCNGG	4 cut(s)	162, 1712, 1752, 1810
SduI	GDGCHC	6 cut(s)	472, 1026, 1135, 2010, 2240, 2312
SfaNI	GCATC	5 cut(s)	115, 235, 647, 1462, 2028
SfcI	CTRYAG	2 cut(s)	438, 1677
Sfr303I	CCGCGG	1 cut(s)	1328
SgrBI	CCGCGG	1 cut(s)	1328
SinI	GGWCC	2 cut(s)	1435, 2025
SmiMI	CAYNNNNRTG	4 cut(s)	137, 926, 1445, 2104
SmlI	CTYRAG	6 cut(s)	598, 907, 1013, 1025, 1388, 1479
SmoI	CTYRAG	6 cut(s)	598, 907, 1013, 1025, 1388, 1479
SphI	GCATGC	1 cut(s)	2203
SseBI	AGGCCT	1 cut(s)	165
SsiI	CCGC	6 cut(s)	395, 828, 891, 1325, 1327, 2049
SspI	AATATT	1 cut(s)	2334
SspMI	CTAG	4 cut(s)	1019, 1139, 1304, 1766
SstI	GAGCTC	1 cut(s)	1026
StuI	AGGCCT	1 cut(s)	165
StyD4I	CCNGG	4 cut(s)	160, 1710, 1750, 1808
StyI	CCWWGG	2 cut(s)	1138, 1652
TaaI	ACNGT	8 cut(s)	100, 487, 671, 1373, 1494, 1619, 1728, 1739
TaiI	ACGT	2 cut(s)	1468, 1489
TaqI	TCGA	6 cut(s)	102, 365, 461, 1627, 1887, 2306
TaqII	GACCGA	1 cut(s)	1110
TatI	WGTACW	4 cut(s)	1044, 1165, 1590, 1732
TauI	GCSGC	2 cut(s)	398, 831
TfiI	GAWTC	3 cut(s)	699, 839, 1671
Tru1I	TTAA	7 cut(s)	147, 206, 324, 1356, 1745, 2166, 2205
Tru9I	TTAA	7 cut(s)	147, 206, 324, 1356, 1745, 2166, 2205
TscAI	CASTG	4 cut(s)	490, 838, 1798, 2301
TseFI	GTSAC	2 cut(s)	1739, 1840
TseI	GCWGC	8 cut(s)	1193, 1214, 1361, 1475, 1521, 1657, 1676, 1865
Tsp45I	GTSAC	2 cut(s)	1739, 1840
TspDTI	ATGAA	6 cut(s)	42, 604, 720, 910, 944, 2279
TspRI	CASTG	4 cut(s)	490, 838, 1798, 2301
Tth111I	GACNNNGTC	1 cut(s)	1838
Van91I	CCANNNNNTGG	1 cut(s)	1571
VpaK11BI	GGWCC	2 cut(s)	1435, 2025
XagI	CCTNNNNNAGG	2 cut(s)	1142, 1709
XapI	RAATTY	1 cut(s)	1255
XceI	RCATGY	3 cut(s)	146, 814, 2203
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1650, 1981
XmaJI	CCTAGG	1 cut(s)	1138
XspI	CTAG	4 cut(s)	1019, 1139, 1304, 1766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.