Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000255.1

Orthogroup ID

OG0001459

Physical Location & Seq

Genomic Coordinates Reverse (-)

30090 .. 33564

Gene Structure 3475 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000255.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

atggcgagaagaaggattactgctagggaaaaattagccttgttggacaaatggcaacctgacgaaagggctcttaaacatacttacagtgttgaggataatgtttttagagttcaaggtagggatatattttttagtttagaagacgtagtctatattattgggcttaagattagtggggaattagtggtgaaggaagaatcggtgatcggaggtaacaggaagagggatgcaaccatcaaagtaagagggttgggtgaggtgcctactagtcgcatgaagccacatggttatgctgttgagtttagttggttgagggaaaaatatcaaactctacctcaaaatgtagagccagatacattggctattcatgttaccgctttttgcctctacattgtaggtgcggtagtattagccactaatgatcacaagtatgtgaacttgtgctacttgaagagtttttctagggagggacttaggcaatatgcatggggacatgcagtcctcgcccacattcactattgtatagtgtcttgtgcatcgaatgacaacaagacgtctataggtgctcacatgttcatgctcatggtgtgggcgatcgagcatatccctagttttgctgcagaattctttggggccgactctcctgattatcctgtagtgtttccattgtcagttggttgggcaccactgattgcctcaaagctaggaaataggcacaaagaaaggaaataccagttgcaattggatcatctttgggacaacgataatcagccttataataggcttcctagcttattccttccccaagatctattggaccagttatggttggggaggtacaagggggttttgattcatctgatgcacaagcagccccttatataccatcgtcccgatctttgcccaaatcaacttgggcttagagaggccgatgcgagtcatgttcctcccttgcttcgaaatgtgaagagatttcgaagttgggagaaacatttcaaagcgtggtgtgatgcgggggactacttggtgagggaagtccattttagaggtgactctgccgaatttttggtagagttatccctaaggtgggccccacagggccacctcggatttcagggtgaaattcggggcgggtcctgtcatttttcaattgtagatgaggaaggcgtctcccagttggctgtttatcgaagaaagagaaggggtggtgcagggacagatgtgaagcaagtttgctacatatctgacccttttaacgccaattggttaatggttttaagatgtccggatagggattgccatggtggtgatgatgaagaggttatggctccttcaaagacattggctgcctctagagcaaaggaaaatattcttaaagcattgagagctacaagagcgaggtctgcaccagtagcagcagaaaatacaagaaaatgttgtgacatcaacaatattgttgccattgcaaccattgttgaagtcaacgctgcatgcgccaaccagacaattcatcgtgctcctttgggagaagggaatgtgcgagtgtcgattttgcatccacttgattctgaagctaagcttccattcccagtcgctgatgagatagttattgttaaggatgctgttggaacttacattgcttggccaagggacctcatagttcaaccccctccccatacagagaagggtctgaagaagaggaaaaggccagtagatggggatgaagaggaggatcttgacttgaagaaattgccaaaagattaccttacaccattgaaatgcttgtggttatgggctagagacaatttggcaaatgggaggacaatgtcctttcagatggaagataaagtttttggcatcaacaggaagcaatatttgtttaagggagacatttatgcattgtgtactatgtctgaactgtctggtggagtgatctccatgtatattctgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009637 GO:0009785 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0030522 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04922 map04010 map04922

Pfam Domains

Protein Families

Metallophos PMD

Protein Analysis

651

Amino Acids

73.89

Weight (kDa)

8.56

Isoelectric Point (pI)

47.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001459)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02840 FvH4_4g28291 FvH4_4g28291 FvH4_5g29581
malus_domestica	MD10G1009900.v1.1 MD13G1054400.v1.1
prunus_persica	Prupe.8G013700_v2.0.a1 Prupe.8G013700_v2.0.a1 Prupe.8G013900_v2.0.a1 Prupe.8G014000_v2.0.a1
pyrus_communis	pycom10g00610 pycom13g04830 pycom14g08210
rosa_laevigata	RLG00000013271
rosa_multiflora	Rmu_co8191550.1_g000001 Rmu_co8290979.1_g000001 Rmu_sc0000056.1_g000004 Rmu_sc0000834.1_g000019 Rmu_sc0004145.1_g000004 Rmu_sc0004145.1_g000014 Rmu_sc0008004.1_g000008 Rmu_sc0009291.1_g000008 Rmu_sc0042239.1_g000001 Rmu_ssc0000189.1_g000023 Rmu_ssc0000255.1_g000006
rosa_roxburghii	Rroxscaffold_5G00350480 Rroxscaffold_5G00350490
rosa_rugosa	Rorug01G0106300 Rorug01G0106300 Rorug01G0106400 Rorug01G0210200
rosa_samantha	Rh1AG123300 Rh1AG225300 Rh1BG097100 Rh1BG098700 Rh1BG193200 Rh1CG210100 Rh1DG128500 Rh1DG221500 Rh2AG598100 Rh2AG598200 Rh5BG336600 Rh6AG174000 Rh7AG329800 Rh7AG336300 Rh7AG336400 Rh7CG354000 Rh7CG354100 Rh7DG332600
rosa_wichuraiana	Rw0G011920 Rw1G019370 Rw6G014810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	780
AatII	GACGTC	1 cut(s)	560
AccB1I	GGYRCC	2 cut(s)	262, 685
AccB7I	CCANNNNNTGG	1 cut(s)	1718
AccIII	TCCGGA	1 cut(s)	1288
AciI	CCGC	4 cut(s)	378, 404, 1016, 1134
AclWI	GGATC	2 cut(s)	756, 1743
AcoI	YGGCCR	1 cut(s)	1646
AcsI	RAATTY	3 cut(s)	626, 1064, 1125
AcuI	CTGAAG	2 cut(s)	1593, 1715
AcyI	GRCGYC	2 cut(s)	557, 1170
AfaI	GTAC	2 cut(s)	842, 1909
AfiI	CCNNNNNNNGG	3 cut(s)	1089, 1090, 1718
AflII	CTTAAG	1 cut(s)	167
AflIII	ACRYGT	1 cut(s)	573
AgsI	TTSAA	9 cut(s)	116, 454, 1000, 1152, 1338, 1481, 1667, 1747, 1780
AhdI	GACNNNNNGTC	1 cut(s)	500
AhlI	ACTAGT	1 cut(s)	269
AluBI	AGCT	5 cut(s)	706, 795, 1391, 1577, 1582
AluI	AGCT	5 cut(s)	706, 795, 1391, 1577, 1582
Alw21I	GWGCWC	2 cut(s)	571, 1522
Alw26I	GTCTC	3 cut(s)	1177, 1797, 1884
AlwI	GGATC	2 cut(s)	756, 1743
AlwNI	CAGNNNCTG	1 cut(s)	1598
Aor13HI	TCCGGA	1 cut(s)	1288
AoxI	GGCC	6 cut(s)	636, 930, 1092, 1102, 1646, 1709
ApaI	GGGCCC	1 cut(s)	1096
ApeKI	GCWGC	5 cut(s)	620, 874, 1349, 1418, 1490
ApoI	RAATTY	3 cut(s)	626, 1064, 1125
Asp700I	GAANNNNTTC	2 cut(s)	995, 1371
AspLEI	GCGC	1 cut(s)	1499
AspS9I	GGNCC	7 cut(s)	636, 820, 1092, 1093, 1102, 1137, 1654
AsuHPI	GGTGA	7 cut(s)	202, 217, 269, 1042, 1064, 1133, 1322
AsuII	TTCGAA	2 cut(s)	961, 979
AvaII	GGWCC	3 cut(s)	820, 1137, 1654
AxyI	CCTNAGG	1 cut(s)	1085
BaeGI	GKGCMC	2 cut(s)	688, 1096
BalI	TGGCCA	1 cut(s)	1648
BanI	GGYRCC	2 cut(s)	262, 685
BanII	GRGCYC	2 cut(s)	73, 1096
BarI	GAAGNNNNNNTAC	1 cut(s)	33
BbsI	GAAGAC	1 cut(s)	150
Bbv12I	GWGCWC	2 cut(s)	571, 1522
BbvI	GCAGC	5 cut(s)	607, 886, 1336, 1430, 1477
BccI	CCATC	4 cut(s)	245, 897, 1712, 1834
BclI	TGATCA	1 cut(s)	424
BcoDI	GTCTC	3 cut(s)	1177, 1797, 1884
BcuI	ACTAGT	1 cut(s)	269
BfaI	CTAG	8 cut(s)	24, 270, 465, 612, 707, 792, 1356, 1800
BfmI	CTRYAG	3 cut(s)	561, 621, 657
BfrI	CTTAAG	1 cut(s)	167
BglII	AGATCT	1 cut(s)	811
BisI	GCNGC	5 cut(s)	621, 875, 1350, 1419, 1491
BlpI	GCTNAGC	1 cut(s)	1578
BlsI	GCNGC	5 cut(s)	622, 876, 1351, 1420, 1492
Bme18I	GGWCC	3 cut(s)	820, 1137, 1654
BmeRI	GACNNNNNGTC	1 cut(s)	500
BmgT120I	GGNCC	7 cut(s)	636, 820, 1092, 1093, 1102, 1137, 1654
BmiI	GGNNCC	8 cut(s)	264, 637, 687, 1094, 1095, 1138, 1332, 1655
BmrI	ACTGGG	2 cut(s)	1171, 1586
BmsI	GCATC	8 cut(s)	220, 548, 855, 925, 1003, 1567, 1612, 1869
BmuI	ACTGGG	2 cut(s)	1171, 1586
BpiI	GAAGAC	1 cut(s)	150
Bpu1102I	GCTNAGC	1 cut(s)	1578
Bpu14I	TTCGAA	2 cut(s)	961, 979
BsaHI	GRCGYC	2 cut(s)	557, 1170
BsaJI	CCNNGG	3 cut(s)	1108, 1303, 1649
BsaWI	WCCGGW	1 cut(s)	1288
Bsc4I	CCNNNNNNNGG	3 cut(s)	1089, 1090, 1718
Bse1I	ACTGG	6 cut(s)	736, 823, 1177, 1412, 1592, 1712
Bse21I	CCTNAGG	1 cut(s)	1085
Bse3DI	GCAATG	2 cut(s)	1464, 1638
BseAI	TCCGGA	1 cut(s)	1288
BseDI	CCNNGG	3 cut(s)	1108, 1303, 1649
BseGI	GGATG	4 cut(s)	235, 1558, 1627, 1729
BseLI	CCNNNNNNNGG	3 cut(s)	1089, 1090, 1718
BseMI	GCAATG	2 cut(s)	1464, 1638
BseNI	ACTGG	6 cut(s)	736, 823, 1177, 1412, 1592, 1712
BseRI	GAGGAG	1 cut(s)	1745
BseSI	GKGCMC	2 cut(s)	688, 1096
BseXI	GCAGC	5 cut(s)	607, 886, 1336, 1430, 1477
BsgI	GTGCAG	2 cut(s)	1233, 1392
Bsh1285I	CGRYCG	1 cut(s)	600
BshFI	GGCC	6 cut(s)	638, 932, 1094, 1104, 1648, 1711
BshNI	GGYRCC	2 cut(s)	262, 685
BsiEI	CGRYCG	1 cut(s)	600
BsiHKAI	GWGCWC	2 cut(s)	571, 1522
BsiSI	CCGG	1 cut(s)	1289
BslFI	GGGAC	7 cut(s)	486, 507, 773, 879, 1034, 1231, 1667
BslI	CCNNNNNNNGG	3 cut(s)	1089, 1090, 1718
BsmAI	GTCTC	3 cut(s)	1177, 1797, 1884
BsmBI	CGTCTC	1 cut(s)	1177
BsmFI	GGGAC	7 cut(s)	486, 507, 773, 879, 1034, 1231, 1667
BsnI	GGCC	6 cut(s)	638, 932, 1094, 1104, 1648, 1711
Bsp119I	TTCGAA	2 cut(s)	961, 979
Bsp120I	GGGCCC	1 cut(s)	1092
Bsp1286I	GDGCHC	5 cut(s)	73, 571, 688, 1096, 1522
Bsp13I	TCCGGA	1 cut(s)	1288
Bsp143I	GATC	8 cut(s)	207, 424, 597, 748, 811, 898, 1735, 1935
Bsp1720I	GCTNAGC	1 cut(s)	1578
Bsp19I	CCATGG	1 cut(s)	1303
BspACI	CCGC	4 cut(s)	378, 404, 1016, 1134
BspANI	GGCC	6 cut(s)	638, 932, 1094, 1104, 1648, 1711
BspEI	TCCGGA	1 cut(s)	1288
BspLI	GGNNCC	8 cut(s)	264, 637, 687, 1094, 1095, 1138, 1332, 1655
BspMAI	CTGCAG	1 cut(s)	625
BspPI	GGATC	2 cut(s)	756, 1743
BspT104I	TTCGAA	2 cut(s)	961, 979
BspT107I	GGYRCC	2 cut(s)	262, 685
BspTI	CTTAAG	1 cut(s)	167
BsrDI	GCAATG	2 cut(s)	1464, 1638
BsrI	ACTGG	6 cut(s)	736, 823, 1177, 1412, 1592, 1712
BssECI	CCNNGG	3 cut(s)	1108, 1303, 1649
BssMI	GATC	8 cut(s)	207, 424, 597, 748, 811, 898, 1735, 1935
BssNI	GRCGYC	2 cut(s)	557, 1170
BssT1I	CCWWGG	2 cut(s)	1303, 1649
Bst4CI	ACNGT	2 cut(s)	89, 1923
Bst6I	CTCTTC	6 cut(s)	218, 449, 965, 1314, 1694, 1722
BstACI	GRCGYC	2 cut(s)	557, 1170
BstAFI	CTTAAG	1 cut(s)	167
BstBI	TTCGAA	2 cut(s)	961, 979
BstC8I	GCNNGC	1 cut(s)	1495
BstDEI	CTNAG	4 cut(s)	476, 923, 1085, 1578
BstDSI	CCRYGG	1 cut(s)	1303
BstF5I	GGATG	4 cut(s)	235, 1558, 1627, 1729
BstHHI	GCGC	1 cut(s)	1499
BstKTI	GATC	8 cut(s)	210, 427, 600, 751, 814, 901, 1738, 1938
BstMAI	GTCTC	3 cut(s)	1177, 1797, 1884
BstMBI	GATC	8 cut(s)	207, 424, 597, 748, 811, 898, 1735, 1935
BstMCI	CGRYCG	1 cut(s)	600
BstMWI	GCNNNNNNNGC	8 cut(s)	506, 874, 1358, 1388, 1397, 1406, 1415, 1496
BstNSI	RCATGY	3 cut(s)	500, 577, 1497
BstSFI	CTRYAG	3 cut(s)	561, 621, 657
BstSLI	GKGCMC	2 cut(s)	688, 1096
BstV1I	GCAGC	5 cut(s)	607, 886, 1336, 1430, 1477
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	2 cut(s)	811, 1735
BstYI	RGATCY	2 cut(s)	811, 1735
Bsu36I	CCTNAGG	1 cut(s)	1085
BsuRI	GGCC	6 cut(s)	638, 932, 1094, 1104, 1648, 1711
BtgI	CCRYGG	1 cut(s)	1303
BtsCI	GGATG	4 cut(s)	235, 1558, 1627, 1729
BtsIMutI	CAGTG	2 cut(s)	94, 689
Cac8I	GCNNGC	1 cut(s)	1495
CaiI	CAGNNNCTG	1 cut(s)	1598
CfoI	GCGC	1 cut(s)	1499
Cfr13I	GGNCC	7 cut(s)	636, 820, 1092, 1093, 1102, 1137, 1654
CseI	GACGC	1 cut(s)	1159
Csp6I	GTAC	2 cut(s)	841, 1908
CviQI	GTAC	2 cut(s)	841, 1908
DdeI	CTNAG	4 cut(s)	476, 923, 1085, 1578
DpnI	GATC	8 cut(s)	209, 426, 599, 750, 813, 900, 1737, 1937
DpnII	GATC	8 cut(s)	207, 424, 597, 748, 811, 898, 1735, 1935
DriI	GACNNNNNGTC	1 cut(s)	500
EaeI	YGGCCR	1 cut(s)	1646
Eam1104I	CTCTTC	6 cut(s)	218, 449, 965, 1314, 1694, 1722
Eam1105I	GACNNNNNGTC	1 cut(s)	500
EarI	CTCTTC	6 cut(s)	218, 449, 965, 1314, 1694, 1722
Eco130I	CCWWGG	2 cut(s)	1303, 1649
Eco24I	GRGCYC	2 cut(s)	73, 1096
Eco47I	GGWCC	3 cut(s)	820, 1137, 1654
Eco57I	CTGAAG	2 cut(s)	1593, 1715
Eco81I	CCTNAGG	1 cut(s)	1085
EcoO109I	RGGNCCY	3 cut(s)	1093, 1137, 1654
EcoRI	GAATTC	1 cut(s)	626
EcoT14I	CCWWGG	2 cut(s)	1303, 1649
EcoT22I	ATGCAT	2 cut(s)	490, 1903
EcoT38I	GRGCYC	2 cut(s)	73, 1096
ErhI	CCWWGG	2 cut(s)	1303, 1649
Esp3I	CGTCTC	1 cut(s)	1177
FalI	AAGNNNNNCTT	4 cut(s)	1566, 1598, 1752, 1784
FaqI	GGGAC	7 cut(s)	486, 507, 773, 879, 1034, 1231, 1667
FauI	CCCGC	2 cut(s)	1009, 1127
FbaI	TGATCA	1 cut(s)	424
Fnu4HI	GCNGC	5 cut(s)	621, 875, 1350, 1419, 1491
FokI	GGATG	4 cut(s)	242, 1545, 1634, 1736
FriOI	GRGCYC	2 cut(s)	73, 1096
Fsp4HI	GCNGC	5 cut(s)	621, 875, 1350, 1419, 1491
FspBI	CTAG	8 cut(s)	24, 270, 465, 612, 707, 792, 1356, 1800
GlaI	GCGC	1 cut(s)	1498
GluI	GCNGC	5 cut(s)	621, 875, 1350, 1419, 1491
HaeIII	GGCC	6 cut(s)	638, 932, 1094, 1104, 1648, 1711
HapII	CCGG	1 cut(s)	1289
HgaI	GACGC	1 cut(s)	1159
HhaI	GCGC	1 cut(s)	1499
Hin1I	GRCGYC	2 cut(s)	557, 1170
Hin6I	GCGC	1 cut(s)	1497
HinP1I	GCGC	1 cut(s)	1497
HincII	GTYRAC	1 cut(s)	1486
HindII	GTYRAC	1 cut(s)	1486
HindIII	AAGCTT	1 cut(s)	1580
HinfI	GANTC	6 cut(s)	200, 641, 856, 940, 1055, 1568
HpaII	CCGG	1 cut(s)	1289
HphI	GGTGA	7 cut(s)	202, 217, 269, 1042, 1064, 1133, 1322
Hpy166II	GTNNAC	3 cut(s)	439, 1486, 1908
Hpy188I	TCNGA	8 cut(s)	212, 864, 1112, 1249, 1573, 1695, 1839, 1918
Hpy188III	TCNNGA	5 cut(s)	647, 896, 1289, 1356, 1739
Hpy8I	GTNNAC	3 cut(s)	439, 1486, 1908
HpyAV	CCTTC	8 cut(s)	6, 187, 812, 1160, 1197, 1344, 1526, 1681
HpyCH4III	ACNGT	2 cut(s)	89, 1923
HpyCH4IV	ACGT	2 cut(s)	147, 557
HpyF10VI	GCNNNNNNNGC	8 cut(s)	506, 874, 1358, 1388, 1397, 1406, 1415, 1496
HpyF3I	CTNAG	4 cut(s)	476, 923, 1085, 1578
HpySE526I	ACGT	2 cut(s)	147, 557
Hsp92I	GRCGYC	2 cut(s)	557, 1170
HspAI	GCGC	1 cut(s)	1497
Kpn2I	TCCGGA	1 cut(s)	1288
Ksp22I	TGATCA	1 cut(s)	424
Kzo9I	GATC	8 cut(s)	207, 424, 597, 748, 811, 898, 1735, 1935
LmnI	GCTCC	2 cut(s)	1336, 1525
Lsp1109I	GCAGC	5 cut(s)	607, 886, 1336, 1430, 1477
LweI	GCATC	8 cut(s)	220, 548, 855, 925, 1003, 1567, 1612, 1869
MaeI	CTAG	8 cut(s)	24, 270, 465, 612, 707, 792, 1356, 1800
MaeII	ACGT	2 cut(s)	147, 557
MaeIII	GTNAC	4 cut(s)	215, 373, 1052, 1442
MalI	GATC	8 cut(s)	209, 426, 599, 750, 813, 900, 1737, 1937
MboI	GATC	8 cut(s)	207, 424, 597, 748, 811, 898, 1735, 1935
MfeI	CAATTG	3 cut(s)	743, 1152, 1264
MflI	RGATCY	2 cut(s)	811, 1735
MhlI	GDGCHC	5 cut(s)	73, 571, 688, 1096, 1522
MlsI	TGGCCA	1 cut(s)	1648
MluNI	TGGCCA	1 cut(s)	1648
MlyI	GAGTC	3 cut(s)	635, 949, 1049
MmeI	TCCRAC	2 cut(s)	24, 1609
Mox20I	TGGCCA	1 cut(s)	1648
Mph1103I	ATGCAT	2 cut(s)	490, 1903
MroI	TCCGGA	1 cut(s)	1288
MroXI	GAANNNNTTC	2 cut(s)	995, 1371
MscI	TGGCCA	1 cut(s)	1648
MseI	TTAA	8 cut(s)	75, 168, 1257, 1271, 1280, 1377, 1617, 1884
MslI	CAYNNNNRTG	6 cut(s)	291, 432, 578, 584, 1308, 1780
Msp20I	TGGCCA	1 cut(s)	1648
MspCI	CTTAAG	1 cut(s)	167
MspI	CCGG	1 cut(s)	1289
MunI	CAATTG	3 cut(s)	743, 1152, 1264
MwoI	GCNNNNNNNGC	8 cut(s)	506, 874, 1358, 1388, 1397, 1406, 1415, 1496
NcoI	CCATGG	1 cut(s)	1303
NdeII	GATC	8 cut(s)	207, 424, 597, 748, 811, 898, 1735, 1935
NlaIV	GGNNCC	8 cut(s)	264, 637, 687, 1094, 1095, 1138, 1332, 1655
NmuCI	GTSAC	2 cut(s)	1052, 1442
NsiI	ATGCAT	2 cut(s)	490, 1903
NspI	RCATGY	3 cut(s)	500, 577, 1497
NspV	TTCGAA	2 cut(s)	961, 979
PaeI	GCATGC	1 cut(s)	1497
PciI	ACATGT	1 cut(s)	573
PdmI	GAANNNNTTC	2 cut(s)	995, 1371
PfeI	GAWTC	3 cut(s)	200, 856, 1568
PflFI	GACNNNGTC	2 cut(s)	149, 1828
PflMI	CCANNNNNTGG	1 cut(s)	1718
PkrI	GCNGC	5 cut(s)	622, 876, 1351, 1420, 1492
Ple19I	CGATCG	1 cut(s)	600
PleI	GAGTC	3 cut(s)	635, 948, 1049
PpsI	GAGTC	3 cut(s)	635, 948, 1049
PpuMI	RGGWCCY	2 cut(s)	1137, 1654
PscI	ACATGT	1 cut(s)	573
PsiI	TTATAA	1 cut(s)	780
Psp5II	RGGWCCY	2 cut(s)	1137, 1654
PspN4I	GGNNCC	8 cut(s)	264, 637, 687, 1094, 1095, 1138, 1332, 1655
PspOMI	GGGCCC	1 cut(s)	1092
PspPI	GGNCC	7 cut(s)	636, 820, 1092, 1093, 1102, 1137, 1654
PspPPI	RGGWCCY	2 cut(s)	1137, 1654
PsrI	GAACNNNNNNTAC	2 cut(s)	431, 463
PstI	CTGCAG	1 cut(s)	625
PstNI	CAGNNNCTG	1 cut(s)	1598
PsuI	RGATCY	2 cut(s)	811, 1735
PsyI	GACNNNGTC	2 cut(s)	149, 1828
PvuI	CGATCG	1 cut(s)	600
RsaI	GTAC	2 cut(s)	842, 1909
RsaNI	GTAC	2 cut(s)	841, 1908
RseI	CAYNNNNRTG	6 cut(s)	291, 432, 578, 584, 1308, 1780
SaqAI	TTAA	8 cut(s)	75, 168, 1257, 1271, 1280, 1377, 1617, 1884
SatI	GCNGC	5 cut(s)	621, 875, 1350, 1419, 1491
Sau3AI	GATC	8 cut(s)	207, 424, 597, 748, 811, 898, 1735, 1935
Sau96I	GGNCC	7 cut(s)	636, 820, 1092, 1093, 1102, 1137, 1654
SchI	GAGTC	3 cut(s)	635, 949, 1049
SduI	GDGCHC	5 cut(s)	73, 571, 688, 1096, 1522
SfaNI	GCATC	8 cut(s)	220, 548, 855, 925, 1003, 1567, 1612, 1869
SfcI	CTRYAG	3 cut(s)	561, 621, 657
SfuI	TTCGAA	2 cut(s)	961, 979
SinI	GGWCC	3 cut(s)	820, 1137, 1654
SmiMI	CAYNNNNRTG	6 cut(s)	291, 432, 578, 584, 1308, 1780
SmlI	CTYRAG	1 cut(s)	167
SmoI	CTYRAG	1 cut(s)	167
SpeI	ACTAGT	1 cut(s)	269
SphI	GCATGC	1 cut(s)	1497
SsiI	CCGC	4 cut(s)	378, 404, 1016, 1134
SspI	AATATT	3 cut(s)	1372, 1456, 1877
SspMI	CTAG	8 cut(s)	24, 270, 465, 612, 707, 792, 1356, 1800
StyI	CCWWGG	2 cut(s)	1303, 1649
TaaI	ACNGT	2 cut(s)	89, 1923
TaiI	ACGT	2 cut(s)	150, 560
TaqI	TCGA	6 cut(s)	542, 600, 961, 979, 1192, 1550
TatI	WGTACW	1 cut(s)	1907
TfiI	GAWTC	3 cut(s)	200, 856, 1568
Tru1I	TTAA	8 cut(s)	75, 168, 1257, 1271, 1280, 1377, 1617, 1884
Tru9I	TTAA	8 cut(s)	75, 168, 1257, 1271, 1280, 1377, 1617, 1884
TscAI	CASTG	2 cut(s)	94, 696
TseFI	GTSAC	2 cut(s)	1052, 1442
TseI	GCWGC	5 cut(s)	620, 874, 1349, 1418, 1490
Tsp45I	GTSAC	2 cut(s)	1052, 1442
TspDTI	ATGAA	7 cut(s)	293, 359, 568, 848, 1332, 1502, 1740
TspRI	CASTG	2 cut(s)	94, 696
Tth111I	GACNNNGTC	2 cut(s)	149, 1828
Van91I	CCANNNNNTGG	1 cut(s)	1718
Vha464I	CTTAAG	1 cut(s)	167
VpaK11BI	GGWCC	3 cut(s)	820, 1137, 1654
XapI	RAATTY	3 cut(s)	626, 1064, 1125
XbaI	TCTAGA	1 cut(s)	1355
XceI	RCATGY	3 cut(s)	500, 577, 1497
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1270
XmnI	GAANNNNTTC	2 cut(s)	995, 1371
XspI	CTAG	8 cut(s)	24, 270, 465, 612, 707, 792, 1356, 1800
ZraI	GACGTC	1 cut(s)	558
Zsp2I	ATGCAT	2 cut(s)	490, 1903

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.