Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0001459

Physical Location & Seq

Genomic Coordinates Reverse (-)

42842555 .. 42844584

Gene Structure 2030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG225300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGACTGTGAGTAGGGAAAAGTTAACTAAGTTGTCTCAATGGAACGTGGACCAAAGGGTCCTTGAGGCATTAAAGGGGACGGGGTTTGATCATTTATATAGATTAGCACAAAATTTGGGTAGACGTCACCATGACAACCACATGTTAGGTGCTCTTGTCAAGTATTATCATGTTGGCGACATGTGTTTTAAAGTCAACAATCGGAATTTATTTTTTGGTTTAGAAGATGTGCTTTATATCTCTGGGCTTCAGGTAGAAGGGAGACTAGTGATAAAGGAAGAGGACGAGGTCAATGGAAACCTTTCAGTAGTAGGGTTAGGAGGGGTGCCTTCAATCCACTTGAAGAACAATGCTTTTCGACTTGATTGGTTAAGAGACACGTTTAAGACTGTACCCGAAGTTGTAGATGATGATACATTTGACCGTCATGTTAGACCATTTTCCCTCTATGTTTTAGGCACTACCATTCTCAGTAATAAGGATCATAGGTTCGTGAATTTGTGCTACTTGAAGTGCTTGTCCGTGATAGGGGAAATTAAGGAGTATGCATGGGGAGTTGCAATGCTCTCCCACGTGCACCATTGTTTACGGCATCATTGCAACACGAGGACGAGTGCAATTGGCGGCCACTTGTTCTTCCTCATGGTGTGGGCGTTGGAGCATATTCCTGCCTTTGCAAGGGAACTCTTCAAGCCCGATGACCCTGTTTATCCTAGCGAGTTCCCGCTATCTTGTAGTTGGGGATTATTGCTTCCCAATGTGCTTTCTAATAGGCACAAAGAGAAGAACTACAAGCAGCACCTGGATCATCTTTGGGAAGACGAAAATCAGGTTACTTGGCAGCCTTATACGAGGCTTAGCGAGAACTTTCTCCCCGAAGAGATTAGGAGCCAGCGACGGATGGGGAGGTTTCGGGGCATTTTGATTCACCCGTTTCACAGGCAGCCCCTCATATTCCATCGTCCCGATCTTTGCCCACGTAAACTTGGGTTTAGAGAGGCTGATGTGACCCATTGTCTCCCCATGCTTGAAGATCGCAAAAGATTCCGAAATTGGCAGCATCATGTAAGAGAGTGGGAGAAGTTGGAGGATTGCTTCGTGATGAACCCAGATGAGCAAGATGGCGACCCCTCGGTGCAAGCGAACTCAGCTGAGCAAGCAGATGAGCAAGAGGGCGAGCCCTCGGTGCAAGGGAACCTGAGGGAAGGCAGACCCCAAAGGTTTTGTCAAAGGAAGAGAAGAAGGGTCAACGAACCAGTACTACAACAGCTTTATCGATCAGATGAGCAAGCTGGGTCCTCAGTGCAAGCGAACTCGAGTGAAGGCAGAACCCAGTCAGTAGCTTGTACACCGCCAGCACTACCGCCGCCATCACAGACACCATCACCGTCATCGCCGGCGCCATCATCATCTATCATAACTCGTATTTTTAACTATTTTTTAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009637 GO:0009785 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0030522 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04922 map04010 map04922

Pfam Domains

Protein Families

Metallophos PMD

Protein Analysis

482

Amino Acids

55.88

Weight (kDa)

7.68

Isoelectric Point (pI)

50.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMD	PF10536	71 - 334	5.3e-27	Plant mobile domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001459)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02840 FvH4_4g28291 FvH4_4g28291 FvH4_5g29581
malus_domestica	MD10G1009900.v1.1 MD13G1054400.v1.1
prunus_persica	Prupe.8G013700_v2.0.a1 Prupe.8G013700_v2.0.a1 Prupe.8G013900_v2.0.a1 Prupe.8G014000_v2.0.a1
pyrus_communis	pycom10g00610 pycom13g04830 pycom14g08210
rosa_laevigata	RLG00000013271
rosa_multiflora	Rmu_co8191550.1_g000001 Rmu_co8290979.1_g000001 Rmu_sc0000056.1_g000004 Rmu_sc0000834.1_g000019 Rmu_sc0004145.1_g000004 Rmu_sc0004145.1_g000014 Rmu_sc0008004.1_g000008 Rmu_sc0009291.1_g000008 Rmu_sc0042239.1_g000001 Rmu_ssc0000189.1_g000023 Rmu_ssc0000255.1_g000006
rosa_roxburghii	Rroxscaffold_5G00350480 Rroxscaffold_5G00350490
rosa_rugosa	Rorug01G0106300 Rorug01G0106300 Rorug01G0106400 Rorug01G0210200
rosa_samantha	Rh1AG123300 Rh1AG225300 Rh1BG097100 Rh1BG098700 Rh1BG193200 Rh1CG210100 Rh1DG128500 Rh1DG221500 Rh2AG598100 Rh2AG598200 Rh5BG336600 Rh6AG174000 Rh7AG329800 Rh7AG336300 Rh7AG336400 Rh7CG354000 Rh7CG354100 Rh7DG332600
rosa_wichuraiana	Rw0G011920 Rw1G019370 Rw6G014810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	56
AatII	GACGTC	1 cut(s)	127
AccB1I	GGYRCC	2 cut(s)	325, 1399
AccI	GTMKAC	1 cut(s)	121
AciI	CCGC	5 cut(s)	624, 725, 1352, 1364, 1367
AclWI	GGATC	2 cut(s)	489, 813
AcoI	YGGCCR	1 cut(s)	625
AcsI	RAATTY	3 cut(s)	112, 205, 496
AcuI	CTGAAG	1 cut(s)	233
AcvI	CACGTG	1 cut(s)	574
AcyI	GRCGYC	2 cut(s)	124, 1400
AfaI	GTAC	3 cut(s)	393, 1260, 1348
AfiI	CCNNNNNNNGG	2 cut(s)	528, 678
AflIII	ACRYGT	3 cut(s)	141, 180, 378
AgsI	TTSAA	5 cut(s)	333, 343, 511, 691, 1031
AhdI	GACNNNNNGTC	1 cut(s)	1014
AhlI	ACTAGT	1 cut(s)	265
AjnI	CCWGG	1 cut(s)	801
AloI	GAACNNNNNNTCC	2 cut(s)	473, 505
AluBI	AGCT	4 cut(s)	1151, 1270, 1292, 1343
AluI	AGCT	4 cut(s)	1151, 1270, 1292, 1343
Alw21I	GWGCWC	2 cut(s)	154, 579
Alw26I	GTCTC	4 cut(s)	39, 256, 369, 1022
Alw44I	GTGCAC	1 cut(s)	575
AlwI	GGATC	2 cut(s)	489, 813
AlwNI	CAGNNNCTG	1 cut(s)	802
Ama87I	CYCGRG	1 cut(s)	1315
AoxI	GGCC	1 cut(s)	625
ApaLI	GTGCAC	1 cut(s)	575
ApeKI	GCWGC	4 cut(s)	796, 841, 943, 1057
ApoI	RAATTY	3 cut(s)	112, 205, 496
ArsI	GACNNNNNNTTYG	2 cut(s)	1210, 1242
Asp700I	GAANNNNTTC	1 cut(s)	301
AspLEI	GCGC	1 cut(s)	1402
AspS9I	GGNCC	3 cut(s)	49, 58, 1296
AsuHPI	GGTGA	3 cut(s)	119, 920, 1377
AvaI	CYCGRG	1 cut(s)	1315
AvaII	GGWCC	3 cut(s)	49, 58, 1296
AxyI	CCTNAGG	1 cut(s)	1199
BaeGI	GKGCMC	1 cut(s)	579
BanI	GGYRCC	2 cut(s)	325, 1399
BanII	GRGCYC	1 cut(s)	1182
BauI	CACGAG	1 cut(s)	604
BbrPI	CACGTG	1 cut(s)	574
BbsI	GAAGAC	1 cut(s)	825
Bbv12I	GWGCWC	2 cut(s)	154, 579
BbvI	GCAGC	4 cut(s)	808, 853, 955, 1069
BccI	CCATC	6 cut(s)	895, 966, 1115, 1378, 1390, 1411
BceAI	ACGGC	1 cut(s)	605
BciT130I	CCWGG	1 cut(s)	803
BclI	TGATCA	1 cut(s)	88
BcoDI	GTCTC	4 cut(s)	39, 256, 369, 1022
BcuI	ACTAGT	1 cut(s)	265
BfaI	CTAG	2 cut(s)	266, 714
BfoI	RGCGCY	1 cut(s)	1403
BisI	GCNGC	6 cut(s)	625, 797, 842, 944, 1058, 1367
BlpI	GCTNAGC	2 cut(s)	857, 1152
BlsI	GCNGC	6 cut(s)	626, 798, 843, 945, 1059, 1368
BmcAI	AGTACT	1 cut(s)	1260
Bme1390I	CCNGG	1 cut(s)	803
Bme18I	GGWCC	3 cut(s)	49, 58, 1296
BmeRI	GACNNNNNGTC	1 cut(s)	1014
BmeT110I	CYCGRG	1 cut(s)	1315
BmgT120I	GGNCC	3 cut(s)	49, 58, 1296
BmiI	GGNNCC	6 cut(s)	59, 327, 890, 1196, 1297, 1401
BmrFI	CCNGG	1 cut(s)	803
BmrI	ACTGGG	1 cut(s)	1327
BmsI	GCATC	2 cut(s)	601, 1069
BmuI	ACTGGG	1 cut(s)	1327
BpiI	GAAGAC	1 cut(s)	825
Bpu1102I	GCTNAGC	2 cut(s)	857, 1152
BpuEI	CTTGAG	1 cut(s)	83
Bsa29I	ATCGAT	1 cut(s)	1276
BsaAI	YACGTR	2 cut(s)	574, 980
BsaHI	GRCGYC	2 cut(s)	124, 1400
BsaJI	CCNNGG	2 cut(s)	1131, 1182
Bsc4I	CCNNNNNNNGG	2 cut(s)	528, 678
Bse118I	RCCGGY	1 cut(s)	1396
Bse1I	ACTGG	2 cut(s)	1256, 1333
Bse21I	CCTNAGG	1 cut(s)	1199
Bse3DI	GCAATG	2 cut(s)	567, 595
BseBI	CCWGG	1 cut(s)	803
BseCI	ATCGAT	1 cut(s)	1276
BseDI	CCNNGG	2 cut(s)	1131, 1182
BseGI	GGATG	1 cut(s)	906
BseLI	CCNNNNNNNGG	2 cut(s)	528, 678
BseMI	GCAATG	2 cut(s)	567, 595
BseMII	CTCAG	5 cut(s)	484, 1143, 1161, 1190, 1314
BseNI	ACTGG	2 cut(s)	1256, 1333
BseSI	GKGCMC	1 cut(s)	579
BseXI	GCAGC	4 cut(s)	808, 853, 955, 1069
BseYI	CCCAGC	1 cut(s)	1292
BshFI	GGCC	1 cut(s)	627
BshNI	GGYRCC	2 cut(s)	325, 1399
BshVI	ATCGAT	1 cut(s)	1276
BsiHKAI	GWGCWC	2 cut(s)	154, 579
BsiHKCI	CYCGRG	1 cut(s)	1315
BsiSI	CCGG	1 cut(s)	1397
BslFI	GGGAC	2 cut(s)	91, 948
BslI	CCNNNNNNNGG	2 cut(s)	528, 678
BsmAI	GTCTC	4 cut(s)	39, 256, 369, 1022
BsmFI	GGGAC	2 cut(s)	91, 948
BsnI	GGCC	1 cut(s)	627
BsoBI	CYCGRG	1 cut(s)	1315
Bsp1286I	GDGCHC	3 cut(s)	154, 579, 1182
Bsp1407I	TGTACA	1 cut(s)	1346
Bsp143I	GATC	6 cut(s)	88, 481, 805, 967, 1033, 1277
Bsp1720I	GCTNAGC	2 cut(s)	857, 1152
BspACI	CCGC	5 cut(s)	624, 725, 1352, 1364, 1367
BspANI	GGCC	1 cut(s)	627
BspCNI	CTCAG	5 cut(s)	483, 1144, 1160, 1191, 1313
BspDI	ATCGAT	1 cut(s)	1276
BspLI	GGNNCC	6 cut(s)	59, 327, 890, 1196, 1297, 1401
BspPI	GGATC	2 cut(s)	489, 813
BspT107I	GGYRCC	2 cut(s)	325, 1399
BsrDI	GCAATG	2 cut(s)	567, 595
BsrFI	RCCGGY	1 cut(s)	1396
BsrGI	TGTACA	1 cut(s)	1346
BsrI	ACTGG	2 cut(s)	1256, 1333
BssAI	RCCGGY	1 cut(s)	1396
BssECI	CCNNGG	2 cut(s)	1131, 1182
BssMI	GATC	6 cut(s)	88, 481, 805, 967, 1033, 1277
BssNI	GRCGYC	2 cut(s)	124, 1400
BssSI	CACGAG	1 cut(s)	604
Bst2BI	CACGAG	1 cut(s)	604
Bst2UI	CCWGG	1 cut(s)	803
Bst4CI	ACNGT	4 cut(s)	7, 391, 425, 1389
Bst6I	CTCTTC	4 cut(s)	273, 692, 873, 1229
BstACI	GRCGYC	2 cut(s)	124, 1400
BstAUI	TGTACA	1 cut(s)	1346
BstBAI	YACGTR	2 cut(s)	574, 980
BstC8I	GCNNGC	8 cut(s)	893, 1140, 1158, 1178, 1290, 1308, 1356, 1398
BstDEI	CTNAG	7 cut(s)	27, 470, 857, 1147, 1152, 1199, 1300
BstENI	CCTNNNNNAGG	1 cut(s)	676
BstF5I	GGATG	1 cut(s)	906
BstH2I	RGCGCY	1 cut(s)	1403
BstHHI	GCGC	1 cut(s)	1402
BstKTI	GATC	6 cut(s)	91, 484, 808, 970, 1036, 1280
BstMAI	GTCTC	4 cut(s)	39, 256, 369, 1022
BstMBI	GATC	6 cut(s)	88, 481, 805, 967, 1033, 1277
BstMWI	GCNNNNNNNGC	3 cut(s)	1148, 1157, 1186
BstNI	CCWGG	1 cut(s)	803
BstNSI	RCATGY	2 cut(s)	145, 184
BstSCI	CCNGG	1 cut(s)	801
BstSLI	GKGCMC	1 cut(s)	579
BstV1I	GCAGC	4 cut(s)	808, 853, 955, 1069
BstV2I	GAAGAC	1 cut(s)	825
Bsu15I	ATCGAT	1 cut(s)	1276
Bsu36I	CCTNAGG	1 cut(s)	1199
BsuRI	GGCC	1 cut(s)	627
BsuTUI	ATCGAT	1 cut(s)	1276
BtgZI	GCGATG	1 cut(s)	1377
BtsCI	GGATG	1 cut(s)	906
BtsIMutI	CAGTG	1 cut(s)	1308
Cac8I	GCNNGC	8 cut(s)	893, 1140, 1158, 1178, 1290, 1308, 1356, 1398
CaiI	CAGNNNCTG	1 cut(s)	802
CfoI	GCGC	1 cut(s)	1402
Cfr10I	RCCGGY	1 cut(s)	1396
Cfr13I	GGNCC	3 cut(s)	49, 58, 1296
ClaI	ATCGAT	1 cut(s)	1276
Csp6I	GTAC	3 cut(s)	392, 1259, 1347
CviAII	CATG	9 cut(s)	131, 142, 170, 181, 428, 549, 643, 1024, 1064
CviQI	GTAC	3 cut(s)	392, 1259, 1347
DdeI	CTNAG	7 cut(s)	27, 470, 857, 1147, 1152, 1199, 1300
DinI	GGCGCC	1 cut(s)	1401
DpnI	GATC	6 cut(s)	90, 483, 807, 969, 1035, 1279
DpnII	GATC	6 cut(s)	88, 481, 805, 967, 1033, 1277
DraI	TTTAAA	2 cut(s)	190, 1443
DrdI	GACNNNNNNGTC	1 cut(s)	56
DriI	GACNNNNNGTC	1 cut(s)	1014
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	1 cut(s)	625
Eam1104I	CTCTTC	4 cut(s)	273, 692, 873, 1229
Eam1105I	GACNNNNNGTC	1 cut(s)	1014
EarI	CTCTTC	4 cut(s)	273, 692, 873, 1229
Eco24I	GRGCYC	1 cut(s)	1182
Eco47I	GGWCC	3 cut(s)	49, 58, 1296
Eco57I	CTGAAG	1 cut(s)	233
Eco72I	CACGTG	1 cut(s)	574
Eco81I	CCTNAGG	1 cut(s)	1199
Eco88I	CYCGRG	1 cut(s)	1315
EcoNI	CCTNNNNNAGG	1 cut(s)	676
EcoO109I	RGGNCCY	2 cut(s)	58, 1296
EcoRII	CCWGG	1 cut(s)	801
EcoT22I	ATGCAT	1 cut(s)	550
EcoT38I	GRGCYC	1 cut(s)	1182
EgeI	GGCGCC	1 cut(s)	1401
EheI	GGCGCC	1 cut(s)	1401
FaeI	CATG	9 cut(s)	134, 145, 173, 184, 431, 552, 646, 1027, 1067
FalI	AAGNNNNNCTT	2 cut(s)	216, 248
FaqI	GGGAC	2 cut(s)	91, 948
FatI	CATG	9 cut(s)	130, 141, 169, 180, 427, 548, 642, 1023, 1063
FauI	CCCGC	1 cut(s)	732
FbaI	TGATCA	1 cut(s)	88
FblI	GTMKAC	1 cut(s)	121
Fnu4HI	GCNGC	6 cut(s)	625, 797, 842, 944, 1058, 1367
FokI	GGATG	1 cut(s)	913
FriOI	GRGCYC	1 cut(s)	1182
Fsp4HI	GCNGC	6 cut(s)	625, 797, 842, 944, 1058, 1367
FspBI	CTAG	2 cut(s)	266, 714
GlaI	GCGC	1 cut(s)	1401
GluI	GCNGC	6 cut(s)	625, 797, 842, 944, 1058, 1367
GsaI	CCCAGC	1 cut(s)	1296
HaeII	RGCGCY	1 cut(s)	1403
HaeIII	GGCC	1 cut(s)	627
HapII	CCGG	1 cut(s)	1397
HhaI	GCGC	1 cut(s)	1402
Hin1I	GRCGYC	2 cut(s)	124, 1400
Hin1II	CATG	9 cut(s)	134, 145, 173, 184, 431, 552, 646, 1027, 1067
Hin6I	GCGC	1 cut(s)	1400
HinP1I	GCGC	1 cut(s)	1400
HincII	GTYRAC	3 cut(s)	24, 196, 1249
HindII	GTYRAC	3 cut(s)	24, 196, 1249
HinfI	GANTC	2 cut(s)	925, 1044
HpaI	GTTAAC	1 cut(s)	24
HpaII	CCGG	1 cut(s)	1397
HphI	GGTGA	3 cut(s)	119, 920, 1377
Hpy166II	GTNNAC	9 cut(s)	24, 49, 122, 196, 577, 587, 983, 1249, 1349
Hpy188I	TCNGA	3 cut(s)	204, 1049, 1282
Hpy188III	TCNNGA	3 cut(s)	493, 965, 1099
Hpy8I	GTNNAC	9 cut(s)	24, 49, 122, 196, 577, 587, 983, 1249, 1349
Hpy99I	CGWCG	1 cut(s)	900
HpyAV	CCTTC	5 cut(s)	251, 339, 1199, 1236, 1316
HpyCH4III	ACNGT	4 cut(s)	7, 391, 425, 1389
HpyCH4IV	ACGT	5 cut(s)	45, 124, 380, 573, 979
HpyCH4V	TGCA	9 cut(s)	548, 560, 577, 600, 617, 677, 1138, 1189, 1306
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1148, 1157, 1186
HpyF3I	CTNAG	7 cut(s)	27, 470, 857, 1147, 1152, 1199, 1300
HpySE526I	ACGT	5 cut(s)	45, 124, 380, 573, 979
Hsp92I	GRCGYC	2 cut(s)	124, 1400
Hsp92II	CATG	9 cut(s)	134, 145, 173, 184, 431, 552, 646, 1027, 1067
HspAI	GCGC	1 cut(s)	1400
KasI	GGCGCC	1 cut(s)	1399
KroI	GCCGGC	1 cut(s)	1396
KroNI	GCCGGC	1 cut(s)	1398
Ksp22I	TGATCA	1 cut(s)	88
KspAI	GTTAAC	1 cut(s)	24
Kzo9I	GATC	6 cut(s)	88, 481, 805, 967, 1033, 1277
LmnI	GCTCC	2 cut(s)	658, 888
Lsp1109I	GCAGC	4 cut(s)	808, 853, 955, 1069
LweI	GCATC	2 cut(s)	601, 1069
MaeI	CTAG	2 cut(s)	266, 714
MaeII	ACGT	5 cut(s)	45, 124, 380, 573, 979
MaeIII	GTNAC	3 cut(s)	125, 832, 1006
MalI	GATC	6 cut(s)	90, 483, 807, 969, 1035, 1279
MboI	GATC	6 cut(s)	88, 481, 805, 967, 1033, 1277
MfeI	CAATTG	1 cut(s)	618
MhlI	GDGCHC	3 cut(s)	154, 579, 1182
MluCI	AATT	6 cut(s)	112, 205, 496, 534, 618, 1051
Mly113I	GGCGCC	1 cut(s)	1400
MmeI	TCCRAC	2 cut(s)	636, 1065
Mph1103I	ATGCAT	1 cut(s)	550
MreI	CGCCGGCG	1 cut(s)	1396
MroNI	GCCGGC	1 cut(s)	1396
MroXI	GAANNNNTTC	1 cut(s)	301
MseI	TTAA	8 cut(s)	23, 71, 189, 371, 384, 537, 1431, 1442
MspA1I	CMGCKG	1 cut(s)	1151
MspI	CCGG	1 cut(s)	1397
MspR9I	CCNGG	1 cut(s)	803
MunI	CAATTG	1 cut(s)	618
MvaI	CCWGG	1 cut(s)	803
MwoI	GCNNNNNNNGC	3 cut(s)	1148, 1157, 1186
NaeI	GCCGGC	1 cut(s)	1398
NarI	GGCGCC	1 cut(s)	1400
NdeII	GATC	6 cut(s)	88, 481, 805, 967, 1033, 1277
NgoMIV	GCCGGC	1 cut(s)	1396
NlaIII	CATG	9 cut(s)	134, 145, 173, 184, 431, 552, 646, 1027, 1067
NlaIV	GGNNCC	6 cut(s)	59, 327, 890, 1196, 1297, 1401
NmuCI	GTSAC	2 cut(s)	125, 1006
NsiI	ATGCAT	1 cut(s)	550
NspI	RCATGY	2 cut(s)	145, 184
PaeR7I	CTCGAG	1 cut(s)	1315
PciI	ACATGT	2 cut(s)	141, 180
PcsI	WCGNNNNNNNCGW	1 cut(s)	1139
PdiI	GCCGGC	1 cut(s)	1398
PdmI	GAANNNNTTC	1 cut(s)	301
PfeI	GAWTC	2 cut(s)	925, 1044
PflFI	GACNNNGTC	1 cut(s)	287
PkrI	GCNGC	6 cut(s)	626, 798, 843, 945, 1059, 1368
PluTI	GGCGCC	1 cut(s)	1403
PmaCI	CACGTG	1 cut(s)	574
PmlI	CACGTG	1 cut(s)	574
Ppu21I	YACGTR	2 cut(s)	574, 980
PpuMI	RGGWCCY	2 cut(s)	58, 1296
PscI	ACATGT	2 cut(s)	141, 180
Psp5II	RGGWCCY	2 cut(s)	58, 1296
Psp6I	CCWGG	1 cut(s)	801
PspCI	CACGTG	1 cut(s)	574
PspFI	CCCAGC	1 cut(s)	1292
PspGI	CCWGG	1 cut(s)	801
PspN4I	GGNNCC	6 cut(s)	59, 327, 890, 1196, 1297, 1401
PspPI	GGNCC	3 cut(s)	49, 58, 1296
PspPPI	RGGWCCY	2 cut(s)	58, 1296
PspXI	VCTCGAGB	1 cut(s)	1315
PsrI	GAACNNNNNNTAC	2 cut(s)	1245, 1277
PstNI	CAGNNNCTG	1 cut(s)	802
PsyI	GACNNNGTC	1 cut(s)	287
PvuII	CAGCTG	1 cut(s)	1151
RsaI	GTAC	3 cut(s)	393, 1260, 1348
RsaNI	GTAC	3 cut(s)	392, 1259, 1347
SaqAI	TTAA	8 cut(s)	23, 71, 189, 371, 384, 537, 1431, 1442
SatI	GCNGC	6 cut(s)	625, 797, 842, 944, 1058, 1367
Sau3AI	GATC	6 cut(s)	88, 481, 805, 967, 1033, 1277
Sau96I	GGNCC	3 cut(s)	49, 58, 1296
ScaI	AGTACT	1 cut(s)	1260
ScrFI	CCNGG	1 cut(s)	803
SduI	GDGCHC	3 cut(s)	154, 579, 1182
SfaNI	GCATC	2 cut(s)	601, 1069
SfoI	GGCGCC	1 cut(s)	1401
Sfr274I	CTCGAG	1 cut(s)	1315
SgrAI	CRCCGGYG	1 cut(s)	1396
SinI	GGWCC	3 cut(s)	49, 58, 1296
SlaI	CTCGAG	1 cut(s)	1315
SmlI	CTYRAG	2 cut(s)	62, 1315
SmoI	CTYRAG	2 cut(s)	62, 1315
SpeI	ACTAGT	1 cut(s)	265
Sse9I	AATT	6 cut(s)	112, 205, 496, 534, 618, 1051
SsiI	CCGC	5 cut(s)	624, 725, 1352, 1364, 1367
SspDI	GGCGCC	1 cut(s)	1399
SspMI	CTAG	2 cut(s)	266, 714
StyD4I	CCNGG	1 cut(s)	801
TaaI	ACNGT	4 cut(s)	7, 391, 425, 1389
TaiI	ACGT	5 cut(s)	48, 127, 383, 576, 982
TaqI	TCGA	3 cut(s)	358, 1276, 1316
TasI	AATT	6 cut(s)	112, 205, 496, 534, 618, 1051
TatI	WGTACW	2 cut(s)	1258, 1346
TauI	GCSGC	2 cut(s)	627, 1369
TfiI	GAWTC	2 cut(s)	925, 1044
Tru1I	TTAA	8 cut(s)	23, 71, 189, 371, 384, 537, 1431, 1442
Tru9I	TTAA	8 cut(s)	23, 71, 189, 371, 384, 537, 1431, 1442
TscAI	CASTG	1 cut(s)	1308
TseFI	GTSAC	2 cut(s)	125, 1006
TseI	GCWGC	4 cut(s)	796, 841, 943, 1057
Tsp45I	GTSAC	2 cut(s)	125, 1006
TspDTI	ATGAA	1 cut(s)	1118
TspGWI	ACGGA	2 cut(s)	511, 913
TspRI	CASTG	1 cut(s)	1308
Tth111I	GACNNNGTC	1 cut(s)	287
VneI	GTGCAC	1 cut(s)	575
VpaK11BI	GGWCC	3 cut(s)	49, 58, 1296
XagI	CCTNNNNNAGG	1 cut(s)	676
XapI	RAATTY	3 cut(s)	112, 205, 496
XceI	RCATGY	2 cut(s)	145, 184
XhoI	CTCGAG	1 cut(s)	1315
XmiI	GTMKAC	1 cut(s)	121
XmnI	GAANNNNTTC	1 cut(s)	301
XspI	CTAG	2 cut(s)	266, 714
ZraI	GACGTC	1 cut(s)	125
ZrmI	AGTACT	1 cut(s)	1260
Zsp2I	ATGCAT	1 cut(s)	550

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.