Prupe.8G013900_v2.0.a1

Serine threonine-protein phosphatase 7 long form homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0001459
Physical Location & Seq
Reverse (-)
1142846 .. 1143963
1118 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G013900.1

Sequence Viewer

Length: 861 bp
ATGCACCTTGAGCCCCAGTTGGTCCCATCTATAGAGTCACGATCATTTGACCTAATTGATGTGGCTCCTTTGGATGCGACTCAGCCTCCATCTACTGGGGTATTTCTAGTGGAATCTAACCAGGAGGAGCCTGCAACCATTTGTCCCTCCAATTCAAGTTCAAGCTTGCTGATTAACCATTTTCATTCAGAATTATTTCCTACAGCCGGATCACACAAGTTGTTGGATGAGTTGAGTTCATTAGAGGCTGATGTTATCGATCTACTTCGGGGGTCTGTTACCCATCATTCTGATGTTCAGCCAACAACTATGCATGCACCTGTGGAGTCTGCCAAGGAGACCATTCGAGGAATCCTTTGTCAAGGCTTTGATACTTTAACGAATTCTGAAATGCAAGAAGCTTTTTTTGCTTCTTCAGAGGTTCTTTTGTCAGCCGATGTCTTCCCATGTGCTCATTTGAAGACTAGGTTGACAGTGTTTAGGAATGAGCTCCGGGAAAATGCTACTGCCTTTCTGCAAGCACAGACAGTTATTGATACAGCTTCAGAGTTTTCTTCTCTTCAAGAATTCTTGGAGGTGCAAGCTGTTAAAATTCCAGCCCTTCAAGAACGCTTAGGCATGGCTGCCAAGAAGATAGCGGATCTTAGAGCAATATTAGACGCTGCCGTTGAGAGACAAACTAAGATGGATGAGGTTCTTGCTGCCTTTGTTGATAAGACTAAAATTGCCAAGCAGAAGTTGGCCTCCTTGAATCCTCAAGCAGCTGACATCAAGTCCAAGAAGCAGGCAGCCGTGAAGGTGGTCGAGCAATGCAAATCATCTTGGGTTGACCTTAGTACTAGTTTATTCAGATTCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

287

Amino Acids

31.36

Weight (kDa)

5.13

Isoelectric Point (pI)

46.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 95
AciI CCGC 1 cut(s) 638
AclWI GGATC 2 cut(s) 217, 648
AcsI RAATTY 3 cut(s) 382, 566, 591
AcuI CTGAAG 2 cut(s) 399, 528
AfaI GTAC 1 cut(s) 838
AfiI CCNNNNNNNGG 2 cut(s) 95, 206
AgsI TTSAA 6 cut(s) 156, 162, 460, 563, 605, 751
AhdI GACNNNNNGTC 1 cut(s) 772
AhlI ACTAGT 1 cut(s) 839
AjnI CCWGG 1 cut(s) 120
AluBI AGCT 6 cut(s) 165, 401, 490, 542, 584, 764
AluI AGCT 6 cut(s) 165, 401, 490, 542, 584, 764
Alw21I GWGCWC 2 cut(s) 454, 492
Alw26I GTCTC 2 cut(s) 332, 667
AlwI GGATC 2 cut(s) 217, 648
AoxI GGCC 1 cut(s) 741
ApeKI GCWGC 5 cut(s) 623, 662, 701, 761, 788
ApoI RAATTY 3 cut(s) 382, 566, 591
Asp700I GAANNNNTTC 1 cut(s) 195
AspS9I GGNCC 1 cut(s) 22
AsuC2I CCSGG 1 cut(s) 494
AvaII GGWCC 1 cut(s) 22
BanII GRGCYC 2 cut(s) 15, 492
BbsI GAAGAC 2 cut(s) 433, 467
Bbv12I GWGCWC 2 cut(s) 454, 492
BbvI GCAGC 5 cut(s) 610, 649, 688, 773, 800
BccI CCATC 4 cut(s) 34, 97, 291, 679
BceAI ACGGC 2 cut(s) 650, 776
BciT130I CCWGG 1 cut(s) 122
BcnI CCSGG 1 cut(s) 494
BcoDI GTCTC 2 cut(s) 332, 667
BcuI ACTAGT 1 cut(s) 839
BfaI CTAG 3 cut(s) 107, 465, 840
BfmI CTRYAG 2 cut(s) 30, 201
BisI GCNGC 5 cut(s) 624, 663, 702, 762, 789
BlsI GCNGC 5 cut(s) 625, 664, 703, 763, 790
BmcAI AGTACT 1 cut(s) 838
Bme1390I CCNGG 2 cut(s) 122, 494
Bme18I GGWCC 1 cut(s) 22
BmeRI GACNNNNNGTC 1 cut(s) 772
BmgT120I GGNCC 1 cut(s) 22
BmiI GGNNCC 3 cut(s) 24, 66, 129
BmrFI CCNGG 2 cut(s) 122, 494
BmrI ACTGGG 2 cut(s) 10, 105
BmsI GCATC 1 cut(s) 64
BmuI ACTGGG 2 cut(s) 10, 105
BpiI GAAGAC 2 cut(s) 433, 467
Bpu10I CCTNAGC 1 cut(s) 613
BpuEI CTTGAG 2 cut(s) 29, 741
BpuMI CCSGG 1 cut(s) 494
Bsa29I ATCGAT 1 cut(s) 258
BsaI GGTCTC 1 cut(s) 332
BsaJI CCNNGG 1 cut(s) 333
BsaXI ACNNNNNCTCC 2 cut(s) 70, 100
Bsc4I CCNNNNNNNGG 2 cut(s) 95, 206
Bse1I ACTGG 2 cut(s) 16, 100
Bse3DI GCAATG 1 cut(s) 815
BseBI CCWGG 1 cut(s) 122
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 1 cut(s) 333
BseGI GGATG 3 cut(s) 79, 232, 694
BseLI CCNNNNNNNGG 2 cut(s) 95, 206
BseMI GCAATG 1 cut(s) 815
BseMII CTCAG 1 cut(s) 95
BseNI ACTGG 2 cut(s) 16, 100
BseRI GAGGAG 1 cut(s) 140
BseXI GCAGC 5 cut(s) 610, 649, 688, 773, 800
BshFI GGCC 1 cut(s) 743
BshVI ATCGAT 1 cut(s) 258
BsiHKAI GWGCWC 2 cut(s) 454, 492
BsiSI CCGG 2 cut(s) 207, 493
BslFI GGGAC 2 cut(s) 8, 129
BslI CCNNNNNNNGG 2 cut(s) 95, 206
BsmAI GTCTC 2 cut(s) 332, 667
BsmFI GGGAC 2 cut(s) 8, 129
BsnI GGCC 1 cut(s) 743
Bso31I GGTCTC 1 cut(s) 332
Bsp1286I GDGCHC 3 cut(s) 15, 454, 492
Bsp143I GATC 4 cut(s) 41, 209, 259, 640
BspACI CCGC 1 cut(s) 638
BspANI GGCC 1 cut(s) 743
BspCNI CTCAG 1 cut(s) 94
BspDI ATCGAT 1 cut(s) 258
BspLI GGNNCC 3 cut(s) 24, 66, 129
BspPI GGATC 2 cut(s) 217, 648
BspTNI GGTCTC 1 cut(s) 332
BsrDI GCAATG 1 cut(s) 815
BsrI ACTGG 2 cut(s) 16, 100
BssECI CCNNGG 1 cut(s) 333
BssMI GATC 4 cut(s) 41, 209, 259, 640
BssT1I CCWWGG 1 cut(s) 333
Bst2UI CCWGG 1 cut(s) 122
Bst4CI ACNGT 2 cut(s) 475, 529
Bst6I CTCTTC 1 cut(s) 564
BstC8I GCNNGC 6 cut(s) 132, 167, 315, 519, 582, 786
BstDEI CTNAG 5 cut(s) 81, 613, 644, 681, 833
BstF5I GGATG 3 cut(s) 79, 232, 694
BstKTI GATC 4 cut(s) 44, 212, 262, 643
BstMAI GTCTC 2 cut(s) 332, 667
BstMBI GATC 4 cut(s) 41, 209, 259, 640
BstMWI GCNNNNNNNGC 2 cut(s) 10, 407
BstNI CCWGG 1 cut(s) 122
BstNSI RCATGY 1 cut(s) 317
BstSCI CCNGG 2 cut(s) 120, 492
BstSFI CTRYAG 2 cut(s) 30, 201
BstV1I GCAGC 5 cut(s) 610, 649, 688, 773, 800
BstV2I GAAGAC 2 cut(s) 433, 467
BstX2I RGATCY 1 cut(s) 640
BstYI RGATCY 1 cut(s) 640
Bsu15I ATCGAT 1 cut(s) 258
BsuRI GGCC 1 cut(s) 743
BsuTUI ATCGAT 1 cut(s) 258
BtsCI GGATG 3 cut(s) 79, 232, 694
BtsIMutI CAGTG 1 cut(s) 480
Cac8I GCNNGC 6 cut(s) 132, 167, 315, 519, 582, 786
Cfr13I GGNCC 1 cut(s) 22
ClaI ATCGAT 1 cut(s) 258
CseI GACGC 1 cut(s) 668
Csp6I GTAC 1 cut(s) 837
CviAII CATG 3 cut(s) 314, 447, 619
CviQI GTAC 1 cut(s) 837
DdeI CTNAG 5 cut(s) 81, 613, 644, 681, 833
DpnI GATC 4 cut(s) 43, 211, 261, 642
DpnII GATC 4 cut(s) 41, 209, 259, 640
DriI GACNNNNNGTC 1 cut(s) 772
Eam1104I CTCTTC 1 cut(s) 564
Eam1105I GACNNNNNGTC 1 cut(s) 772
EarI CTCTTC 1 cut(s) 564
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 1 cut(s) 333
Eco24I GRGCYC 2 cut(s) 15, 492
Eco31I GGTCTC 1 cut(s) 332
Eco47I GGWCC 1 cut(s) 22
Eco53kI GAGCTC 1 cut(s) 490
Eco57I CTGAAG 2 cut(s) 399, 528
EcoICRI GAGCTC 1 cut(s) 490
EcoRI GAATTC 2 cut(s) 382, 566
EcoRII CCWGG 1 cut(s) 120
EcoT14I CCWWGG 1 cut(s) 333
EcoT22I ATGCAT 1 cut(s) 315
EcoT38I GRGCYC 2 cut(s) 15, 492
ErhI CCWWGG 1 cut(s) 333
FaeI CATG 3 cut(s) 317, 450, 622
FaiI YATR 5 cut(s) 32, 311, 315, 448, 620
FaqI GGGAC 2 cut(s) 8, 129
FatI CATG 3 cut(s) 313, 446, 618
Fnu4HI GCNGC 5 cut(s) 624, 663, 702, 762, 789
FokI GGATG 3 cut(s) 86, 239, 701
FriOI GRGCYC 2 cut(s) 15, 492
Fsp4HI GCNGC 5 cut(s) 624, 663, 702, 762, 789
FspBI CTAG 3 cut(s) 107, 465, 840
GluI GCNGC 5 cut(s) 624, 663, 702, 762, 789
HaeIII GGCC 1 cut(s) 743
HapII CCGG 2 cut(s) 207, 493
HgaI GACGC 1 cut(s) 668
Hin1II CATG 3 cut(s) 317, 450, 622
HincII GTYRAC 2 cut(s) 471, 829
HindII GTYRAC 2 cut(s) 471, 829
HindIII AAGCTT 2 cut(s) 163, 399
HinfI GANTC 7 cut(s) 35, 79, 113, 326, 351, 751, 852
HpaII CCGG 2 cut(s) 207, 493
Hpy166II GTNNAC 2 cut(s) 471, 829
Hpy188I TCNGA 6 cut(s) 190, 292, 388, 418, 547, 851
Hpy188III TCNNGA 3 cut(s) 39, 563, 605
Hpy8I GTNNAC 2 cut(s) 471, 829
HpyAV CCTTC 2 cut(s) 611, 790
HpyCH4III ACNGT 2 cut(s) 475, 529
HpyCH4V TGCA 8 cut(s) 4, 134, 313, 317, 394, 517, 580, 813
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 407
HpyF3I CTNAG 5 cut(s) 81, 613, 644, 681, 833
Hsp92II CATG 3 cut(s) 317, 450, 622
Kzo9I GATC 4 cut(s) 41, 209, 259, 640
LmnI GCTCC 3 cut(s) 70, 127, 495
Lsp1109I GCAGC 5 cut(s) 610, 649, 688, 773, 800
LweI GCATC 1 cut(s) 64
MaeI CTAG 3 cut(s) 107, 465, 840
MaeIII GTNAC 2 cut(s) 36, 277
MalI GATC 4 cut(s) 43, 211, 261, 642
MboI GATC 4 cut(s) 41, 209, 259, 640
MboII GAAGA 6 cut(s) 405, 433, 472, 546, 551, 643
MflI RGATCY 1 cut(s) 640
MhlI GDGCHC 3 cut(s) 15, 454, 492
MluCI AATT 7 cut(s) 54, 151, 191, 382, 566, 591, 723
MlyI GAGTC 3 cut(s) 44, 73, 335
MmeI TCCRAC 1 cut(s) 204
Mph1103I ATGCAT 1 cut(s) 315
MroXI GAANNNNTTC 1 cut(s) 195
MseI TTAA 3 cut(s) 174, 377, 588
MslI CAYNNNNRTG 1 cut(s) 291
MspA1I CMGCKG 1 cut(s) 764
MspI CCGG 2 cut(s) 207, 493
MspR9I CCNGG 2 cut(s) 122, 494
MvaI CCWGG 1 cut(s) 122
MwoI GCNNNNNNNGC 2 cut(s) 10, 407
NciI CCSGG 1 cut(s) 494
NdeII GATC 4 cut(s) 41, 209, 259, 640
NlaIII CATG 3 cut(s) 317, 450, 622
NlaIV GGNNCC 3 cut(s) 24, 66, 129
NmuCI GTSAC 1 cut(s) 36
NsiI ATGCAT 1 cut(s) 315
NspI RCATGY 1 cut(s) 317
PaeI GCATGC 1 cut(s) 317
PdmI GAANNNNTTC 1 cut(s) 195
PfeI GAWTC 4 cut(s) 113, 351, 751, 852
PflMI CCANNNNNTGG 1 cut(s) 95
PfoI TCCNGGA 1 cut(s) 492
PkrI GCNGC 5 cut(s) 625, 664, 703, 763, 790
PleI GAGTC 3 cut(s) 43, 73, 334
PpsI GAGTC 3 cut(s) 43, 73, 334
Psp124BI GAGCTC 1 cut(s) 492
Psp6I CCWGG 1 cut(s) 120
PspGI CCWGG 1 cut(s) 120
PspN4I GGNNCC 3 cut(s) 24, 66, 129
PspPI GGNCC 1 cut(s) 22
PsuI RGATCY 1 cut(s) 640
PvuII CAGCTG 1 cut(s) 764
RsaI GTAC 1 cut(s) 838
RsaNI GTAC 1 cut(s) 837
RseI CAYNNNNRTG 1 cut(s) 291
SacI GAGCTC 1 cut(s) 492
SaqAI TTAA 3 cut(s) 174, 377, 588
SatI GCNGC 5 cut(s) 624, 663, 702, 762, 789
Sau3AI GATC 4 cut(s) 41, 209, 259, 640
Sau96I GGNCC 1 cut(s) 22
ScaI AGTACT 1 cut(s) 838
SchI GAGTC 3 cut(s) 44, 73, 335
ScrFI CCNGG 2 cut(s) 122, 494
SduI GDGCHC 3 cut(s) 15, 454, 492
SfaNI GCATC 1 cut(s) 64
SfcI CTRYAG 2 cut(s) 30, 201
SinI GGWCC 1 cut(s) 22
SmiMI CAYNNNNRTG 1 cut(s) 291
SmlI CTYRAG 2 cut(s) 8, 756
SmoI CTYRAG 2 cut(s) 8, 756
SpeI ACTAGT 1 cut(s) 839
SphI GCATGC 1 cut(s) 317
Sse9I AATT 7 cut(s) 54, 151, 191, 382, 566, 591, 723
SsiI CCGC 1 cut(s) 638
SspI AATATT 1 cut(s) 654
SspMI CTAG 3 cut(s) 107, 465, 840
SstI GAGCTC 1 cut(s) 492
StyD4I CCNGG 2 cut(s) 120, 492
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 2 cut(s) 475, 529
TaqI TCGA 3 cut(s) 258, 346, 804
TasI AATT 7 cut(s) 54, 151, 191, 382, 566, 591, 723
TatI WGTACW 1 cut(s) 836
TfiI GAWTC 4 cut(s) 113, 351, 751, 852
Tru1I TTAA 3 cut(s) 174, 377, 588
Tru9I TTAA 3 cut(s) 174, 377, 588
TscAI CASTG 1 cut(s) 480
TseFI GTSAC 1 cut(s) 36
TseI GCWGC 5 cut(s) 623, 662, 701, 761, 788
Tsp45I GTSAC 1 cut(s) 36
TspDTI ATGAA 2 cut(s) 173, 228
TspRI CASTG 1 cut(s) 480
Van91I CCANNNNNTGG 1 cut(s) 95
VpaK11BI GGWCC 1 cut(s) 22
XapI RAATTY 3 cut(s) 382, 566, 591
XceI RCATGY 1 cut(s) 317
XcmI CCANNNNNNNNNTGG 1 cut(s) 736
XmnI GAANNNNTTC 1 cut(s) 195
XspI CTAG 3 cut(s) 107, 465, 840
ZrmI AGTACT 1 cut(s) 838
Zsp2I ATGCAT 1 cut(s) 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.