Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0001459

Physical Location & Seq

Genomic Coordinates Reverse (-)

30954915 .. 30961869

Gene Structure 6955 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG193200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGACTGTGAGTAGGGAAAAGTTAACTAAGTTGTCTCAATGGAACGTGGACCAAAGGGTCCTTGAGGCATTAAGGGGGACGGGGTTTGATCATTTATATAGATTAGCACAAAATTTGGGTAGACGTCACCATGACAACTACATGTTAAGTGCTCTTGTCAAGTATTATCATGTTGGTGACATGTGTTTTAAAGTCAACAATCGGAATTTATTTTTTGGTTTAGAAGATGTGCTTTATATCTCTGGGCTTCAGGTAGAAGGGAGACTAGTGATAAAGGGAGAGGCGGAGGTCAATGGAAACCTTTTAGTAGTAGGGTTAGGAGGAGTGCCTGCGATCCACTTGAAGAACAATGTTGTTCGACTTGATTGGTTAAGAGACACGTTTGAGACTGTACCCGAAGTTGTAGATGATGATACATTTGACCGTCATGTTAGAGCATTTTCCCTCTATGTTTTAGGCACTACCATTCTCAGTAATAAGGATCATACGTTCGTGAATTTGTGCTACTTGAAGTGCTTGTCCGTGATAGGGGAAATTAAGGAGTATGCATGGGGAGTTGCAATGCTCTCCCACGTGCACCATTGTTTACGGCATCATTGCAACACGAGGACGAGTGCAATTGGCGGCCACTTGTTCTTCCTCATGATTCTAGACAGTGGAGAACATATAGGATTGAAACATTTTAAGCCTATAAAGCCCTTGGGATCTGGTGATACTGGCAGTGTGCATTTGGTCCAATTGTGTGGAACTGATCAGTACTACGCCATGAAGGCTATGGATAAGAGTATCATGCTCAACAGGAACAAGTGTGCCTTTGCAAGGGAACTCTTCAAGCCCGATGACCCTGCTTATCCTAGCGAGTTCCCGCTATCTTGTAGTTGGGGATTATTGCTTCCCAATGTGCTTTCTAATAGGCACAAAGAGAAGAACTACAAGCAGCACCTGGATCATCTTTGGGAAGACCAAAATCAGGTTACTTGGCAGCCTTATACGAGGCTTAGCGAGAACTTTCTCCCTGAAGAGATTAGGAGCCAACGACGGATGGGGAGGTTTCGGGGCATCTTGATTCACCCGTTTCACAGGCAGCCATCGTCCCGATCTTTGCCAAGTAAATTGGGGTTTAGAGAGGCCGATGTGACCCATTGTCTCCCCATGCTTGAAGATCGCAAAAGATTCCGAAATTGGCAGCATCATGTAAGAGAGTGGGAGAAGTTGGAGGATTGCTTTGTGATGAACCCAGATGAGCAAGATGGCGACCCCTCGGTGCAAGCGAACTCAGCTGAGCAAGCAGATGAGCAAGAGGGCGAGCCCTCGGTGCAAGGGAACCTGAGGGAAGGCAGACCCCAAAGGTTTTGTCAAAGGAAGAGAAGAAGGGTCAACGAACCAGTACTACAACAGCTTTATCGATCAGATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009637 GO:0009785 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0030522 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04922 map04010 map04922

Pfam Domains

Protein Families

Metallophos PMD

Protein Analysis

472

Amino Acids

54.77

Weight (kDa)

7.99

Isoelectric Point (pI)

41.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMD	PF10536	45 - 347	1.9e-19	Plant mobile domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001459)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02840 FvH4_4g28291 FvH4_4g28291 FvH4_5g29581
malus_domestica	MD10G1009900.v1.1 MD13G1054400.v1.1
prunus_persica	Prupe.8G013700_v2.0.a1 Prupe.8G013700_v2.0.a1 Prupe.8G013900_v2.0.a1 Prupe.8G014000_v2.0.a1
pyrus_communis	pycom10g00610 pycom13g04830 pycom14g08210
rosa_laevigata	RLG00000013271
rosa_multiflora	Rmu_co8191550.1_g000001 Rmu_co8290979.1_g000001 Rmu_sc0000056.1_g000004 Rmu_sc0000834.1_g000019 Rmu_sc0004145.1_g000004 Rmu_sc0004145.1_g000014 Rmu_sc0008004.1_g000008 Rmu_sc0009291.1_g000008 Rmu_sc0042239.1_g000001 Rmu_ssc0000189.1_g000023 Rmu_ssc0000255.1_g000006
rosa_roxburghii	Rroxscaffold_5G00350480 Rroxscaffold_5G00350490
rosa_rugosa	Rorug01G0106300 Rorug01G0106300 Rorug01G0106400 Rorug01G0210200
rosa_samantha	Rh1AG123300 Rh1AG225300 Rh1BG097100 Rh1BG098700 Rh1BG193200 Rh1CG210100 Rh1DG128500 Rh1DG221500 Rh2AG598100 Rh2AG598200 Rh5BG336600 Rh6AG174000 Rh7AG329800 Rh7AG336300 Rh7AG336400 Rh7CG354000 Rh7CG354100 Rh7DG332600
rosa_wichuraiana	Rw0G011920 Rw1G019370 Rw6G014810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	56
AatII	GACGTC	1 cut(s)	127
AccI	GTMKAC	1 cut(s)	121
AciI	CCGC	3 cut(s)	284, 624, 866
AclWI	GGATC	4 cut(s)	328, 489, 712, 954
AcoI	YGGCCR	1 cut(s)	625
AcsI	RAATTY	3 cut(s)	112, 205, 496
AcuI	CTGAAG	2 cut(s)	233, 1038
AcvI	CACGTG	1 cut(s)	574
AcyI	GRCGYC	1 cut(s)	124
AfaI	GTAC	3 cut(s)	393, 758, 1389
AfiI	CCNNNNNNNGG	3 cut(s)	528, 819, 970
AflIII	ACRYGT	3 cut(s)	141, 180, 378
AgsI	TTSAA	5 cut(s)	343, 511, 676, 832, 1160
AhdI	GACNNNNNGTC	1 cut(s)	1143
AhlI	ACTAGT	1 cut(s)	265
AjnI	CCWGG	1 cut(s)	942
AloI	GAACNNNNNNTCC	2 cut(s)	473, 505
AluBI	AGCT	2 cut(s)	1280, 1399
AluI	AGCT	2 cut(s)	1280, 1399
Alw21I	GWGCWC	2 cut(s)	154, 579
Alw26I	GTCTC	5 cut(s)	39, 256, 369, 380, 1151
Alw44I	GTGCAC	1 cut(s)	575
AlwI	GGATC	4 cut(s)	328, 489, 712, 954
AlwNI	CAGNNNCTG	1 cut(s)	943
AoxI	GGCC	2 cut(s)	625, 1128
ApaLI	GTGCAC	1 cut(s)	575
ApeKI	GCWGC	4 cut(s)	937, 982, 1084, 1186
ApoI	RAATTY	3 cut(s)	112, 205, 496
ArsI	GACNNNNNNTTYG	2 cut(s)	1339, 1371
AspS9I	GGNCC	3 cut(s)	49, 58, 733
AsuHPI	GGTGA	4 cut(s)	119, 188, 722, 1061
AvaII	GGWCC	3 cut(s)	49, 58, 733
AxyI	CCTNAGG	1 cut(s)	1328
BaeGI	GKGCMC	1 cut(s)	579
BanII	GRGCYC	1 cut(s)	1311
BauI	CACGAG	1 cut(s)	604
BbrPI	CACGTG	1 cut(s)	574
BbsI	GAAGAC	1 cut(s)	966
Bbv12I	GWGCWC	2 cut(s)	154, 579
BbvI	GCAGC	4 cut(s)	949, 994, 1096, 1198
BccI	CCATC	3 cut(s)	1036, 1096, 1244
BceAI	ACGGC	1 cut(s)	605
BcgI	CGANNNNNNTGC	2 cut(s)	827, 861
BciT130I	CCWGG	1 cut(s)	944
BclI	TGATCA	2 cut(s)	88, 751
BcoDI	GTCTC	5 cut(s)	39, 256, 369, 380, 1151
BcuI	ACTAGT	1 cut(s)	265
BfaI	CTAG	3 cut(s)	266, 650, 855
BglI	GCCNNNNNGGC	1 cut(s)	770
BisI	GCNGC	5 cut(s)	625, 938, 983, 1085, 1187
BlpI	GCTNAGC	2 cut(s)	998, 1281
BlsI	GCNGC	5 cut(s)	626, 939, 984, 1086, 1188
BmcAI	AGTACT	2 cut(s)	758, 1389
Bme1390I	CCNGG	1 cut(s)	944
Bme18I	GGWCC	3 cut(s)	49, 58, 733
BmeRI	GACNNNNNGTC	1 cut(s)	1143
BmgT120I	GGNCC	3 cut(s)	49, 58, 733
BmiI	GGNNCC	3 cut(s)	59, 1031, 1325
BmrFI	CCNGG	1 cut(s)	944
BmsI	GCATC	3 cut(s)	601, 1068, 1198
BpiI	GAAGAC	1 cut(s)	966
Bpu1102I	GCTNAGC	2 cut(s)	998, 1281
BpuEI	CTTGAG	1 cut(s)	83
Bsa29I	ATCGAT	1 cut(s)	1405
BsaAI	YACGTR	1 cut(s)	574
BsaHI	GRCGYC	1 cut(s)	124
BsaJI	CCNNGG	3 cut(s)	699, 1260, 1311
Bsc4I	CCNNNNNNNGG	3 cut(s)	528, 819, 970
Bse1I	ACTGG	2 cut(s)	721, 1385
Bse21I	CCTNAGG	1 cut(s)	1328
Bse3DI	GCAATG	2 cut(s)	567, 595
BseBI	CCWGG	1 cut(s)	944
BseCI	ATCGAT	1 cut(s)	1405
BseDI	CCNNGG	3 cut(s)	699, 1260, 1311
BseGI	GGATG	1 cut(s)	1047
BseLI	CCNNNNNNNGG	3 cut(s)	528, 819, 970
BseMI	GCAATG	2 cut(s)	567, 595
BseMII	CTCAG	4 cut(s)	484, 1272, 1290, 1319
BseNI	ACTGG	2 cut(s)	721, 1385
BseRI	GAGGAG	1 cut(s)	336
BseSI	GKGCMC	1 cut(s)	579
BseXI	GCAGC	4 cut(s)	949, 994, 1096, 1198
BshFI	GGCC	2 cut(s)	627, 1130
BshVI	ATCGAT	1 cut(s)	1405
BsiHKAI	GWGCWC	2 cut(s)	154, 579
BslFI	GGGAC	2 cut(s)	91, 1078
BslI	CCNNNNNNNGG	3 cut(s)	528, 819, 970
BsmAI	GTCTC	5 cut(s)	39, 256, 369, 380, 1151
BsmFI	GGGAC	2 cut(s)	91, 1078
BsnI	GGCC	2 cut(s)	627, 1130
Bsp1286I	GDGCHC	3 cut(s)	154, 579, 1311
Bsp143I	GATC	9 cut(s)	88, 333, 481, 704, 751, 946, 1097, 1162, 1406
Bsp1720I	GCTNAGC	2 cut(s)	998, 1281
BspACI	CCGC	3 cut(s)	284, 624, 866
BspANI	GGCC	2 cut(s)	627, 1130
BspCNI	CTCAG	4 cut(s)	483, 1273, 1289, 1320
BspDI	ATCGAT	1 cut(s)	1405
BspHI	TCATGA	1 cut(s)	642
BspLI	GGNNCC	3 cut(s)	59, 1031, 1325
BspPI	GGATC	4 cut(s)	328, 489, 712, 954
BsrDI	GCAATG	2 cut(s)	567, 595
BsrI	ACTGG	2 cut(s)	721, 1385
BssECI	CCNNGG	3 cut(s)	699, 1260, 1311
BssMI	GATC	9 cut(s)	88, 333, 481, 704, 751, 946, 1097, 1162, 1406
BssNI	GRCGYC	1 cut(s)	124
BssSI	CACGAG	1 cut(s)	604
BssT1I	CCWWGG	1 cut(s)	699
Bst2BI	CACGAG	1 cut(s)	604
Bst2UI	CCWGG	1 cut(s)	944
Bst4CI	ACNGT	4 cut(s)	7, 391, 425, 656
Bst6I	CTCTTC	3 cut(s)	833, 1014, 1358
BstACI	GRCGYC	1 cut(s)	124
BstBAI	YACGTR	1 cut(s)	574
BstC8I	GCNNGC	4 cut(s)	330, 1269, 1287, 1307
BstDEI	CTNAG	6 cut(s)	27, 470, 998, 1276, 1281, 1328
BstENI	CCTNNNNNAGG	1 cut(s)	817
BstF5I	GGATG	1 cut(s)	1047
BstKTI	GATC	9 cut(s)	91, 336, 484, 707, 754, 949, 1100, 1165, 1409
BstMAI	GTCTC	5 cut(s)	39, 256, 369, 380, 1151
BstMBI	GATC	9 cut(s)	88, 333, 481, 704, 751, 946, 1097, 1162, 1406
BstMWI	GCNNNNNNNGC	5 cut(s)	694, 770, 1277, 1286, 1315
BstNI	CCWGG	1 cut(s)	944
BstNSI	RCATGY	2 cut(s)	145, 184
BstSCI	CCNGG	1 cut(s)	942
BstSLI	GKGCMC	1 cut(s)	579
BstV1I	GCAGC	4 cut(s)	949, 994, 1096, 1198
BstV2I	GAAGAC	1 cut(s)	966
BstX2I	RGATCY	1 cut(s)	704
BstXI	CCANNNNNNTGG	1 cut(s)	743
BstYI	RGATCY	1 cut(s)	704
Bsu15I	ATCGAT	1 cut(s)	1405
Bsu36I	CCTNAGG	1 cut(s)	1328
BsuRI	GGCC	2 cut(s)	627, 1130
BsuTUI	ATCGAT	1 cut(s)	1405
BtsCI	GGATG	1 cut(s)	1047
BtsI	GCAGTG	1 cut(s)	727
BtsIMutI	CAGTG	2 cut(s)	661, 727
Cac8I	GCNNGC	4 cut(s)	330, 1269, 1287, 1307
CaiI	CAGNNNCTG	1 cut(s)	943
CciI	TCATGA	1 cut(s)	642
Cfr13I	GGNCC	3 cut(s)	49, 58, 733
ClaI	ATCGAT	1 cut(s)	1405
Csp6I	GTAC	3 cut(s)	392, 757, 1388
CviQI	GTAC	3 cut(s)	392, 757, 1388
DdeI	CTNAG	6 cut(s)	27, 470, 998, 1276, 1281, 1328
DpnI	GATC	9 cut(s)	90, 335, 483, 706, 753, 948, 1099, 1164, 1408
DpnII	GATC	9 cut(s)	88, 333, 481, 704, 751, 946, 1097, 1162, 1406
DraI	TTTAAA	1 cut(s)	190
DrdI	GACNNNNNNGTC	1 cut(s)	56
DriI	GACNNNNNGTC	1 cut(s)	1143
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	1 cut(s)	625
Eam1104I	CTCTTC	3 cut(s)	833, 1014, 1358
Eam1105I	GACNNNNNGTC	1 cut(s)	1143
EarI	CTCTTC	3 cut(s)	833, 1014, 1358
EciI	GGCGGA	1 cut(s)	299
Eco130I	CCWWGG	1 cut(s)	699
Eco24I	GRGCYC	1 cut(s)	1311
Eco47I	GGWCC	3 cut(s)	49, 58, 733
Eco57I	CTGAAG	2 cut(s)	233, 1038
Eco72I	CACGTG	1 cut(s)	574
Eco81I	CCTNAGG	1 cut(s)	1328
EcoNI	CCTNNNNNAGG	1 cut(s)	817
EcoO109I	RGGNCCY	1 cut(s)	58
EcoRII	CCWGG	1 cut(s)	942
EcoT14I	CCWWGG	1 cut(s)	699
EcoT22I	ATGCAT	1 cut(s)	550
EcoT38I	GRGCYC	1 cut(s)	1311
ErhI	CCWWGG	1 cut(s)	699
FalI	AAGNNNNNCTT	4 cut(s)	216, 248, 797, 829
FaqI	GGGAC	2 cut(s)	91, 1078
FauI	CCCGC	1 cut(s)	873
FbaI	TGATCA	2 cut(s)	88, 751
FblI	GTMKAC	1 cut(s)	121
Fnu4HI	GCNGC	5 cut(s)	625, 938, 983, 1085, 1187
FokI	GGATG	1 cut(s)	1054
FriOI	GRGCYC	1 cut(s)	1311
Fsp4HI	GCNGC	5 cut(s)	625, 938, 983, 1085, 1187
FspBI	CTAG	3 cut(s)	266, 650, 855
GluI	GCNGC	5 cut(s)	625, 938, 983, 1085, 1187
HaeIII	GGCC	2 cut(s)	627, 1130
Hin1I	GRCGYC	1 cut(s)	124
HincII	GTYRAC	3 cut(s)	24, 196, 1378
HindII	GTYRAC	3 cut(s)	24, 196, 1378
HinfI	GANTC	3 cut(s)	646, 1066, 1173
HpaI	GTTAAC	1 cut(s)	24
HphI	GGTGA	4 cut(s)	119, 188, 722, 1061
Hpy166II	GTNNAC	7 cut(s)	24, 49, 122, 196, 577, 587, 1378
Hpy188I	TCNGA	3 cut(s)	204, 1178, 1411
Hpy188III	TCNNGA	5 cut(s)	493, 643, 650, 1063, 1095
Hpy8I	GTNNAC	7 cut(s)	24, 49, 122, 196, 577, 587, 1378
Hpy99I	CGWCG	1 cut(s)	1041
HpyAV	CCTTC	4 cut(s)	251, 763, 1328, 1365
HpyCH4III	ACNGT	4 cut(s)	7, 391, 425, 656
HpyCH4IV	ACGT	5 cut(s)	45, 124, 380, 488, 573
HpyCH4V	TGCA	9 cut(s)	548, 560, 577, 600, 617, 727, 818, 1267, 1318
HpyF10VI	GCNNNNNNNGC	5 cut(s)	694, 770, 1277, 1286, 1315
HpyF3I	CTNAG	6 cut(s)	27, 470, 998, 1276, 1281, 1328
HpySE526I	ACGT	5 cut(s)	45, 124, 380, 488, 573
Hsp92I	GRCGYC	1 cut(s)	124
Ksp22I	TGATCA	2 cut(s)	88, 751
KspAI	GTTAAC	1 cut(s)	24
Kzo9I	GATC	9 cut(s)	88, 333, 481, 704, 751, 946, 1097, 1162, 1406
LmnI	GCTCC	1 cut(s)	1029
Lsp1109I	GCAGC	4 cut(s)	949, 994, 1096, 1198
LweI	GCATC	3 cut(s)	601, 1068, 1198
MaeI	CTAG	3 cut(s)	266, 650, 855
MaeII	ACGT	5 cut(s)	45, 124, 380, 488, 573
MaeIII	GTNAC	4 cut(s)	125, 176, 973, 1135
MalI	GATC	9 cut(s)	90, 335, 483, 706, 753, 948, 1099, 1164, 1408
MboI	GATC	9 cut(s)	88, 333, 481, 704, 751, 946, 1097, 1162, 1406
MfeI	CAATTG	2 cut(s)	618, 737
MflI	RGATCY	1 cut(s)	704
MhlI	GDGCHC	3 cut(s)	154, 579, 1311
MluCI	AATT	8 cut(s)	112, 205, 496, 534, 618, 737, 1112, 1180
MmeI	TCCRAC	1 cut(s)	1194
Mph1103I	ATGCAT	1 cut(s)	550
MseI	TTAA	7 cut(s)	23, 71, 146, 189, 371, 537, 684
MslI	CAYNNNNRTG	1 cut(s)	174
MspA1I	CMGCKG	1 cut(s)	1280
MspR9I	CCNGG	1 cut(s)	944
MunI	CAATTG	2 cut(s)	618, 737
MvaI	CCWGG	1 cut(s)	944
MwoI	GCNNNNNNNGC	5 cut(s)	694, 770, 1277, 1286, 1315
NdeII	GATC	9 cut(s)	88, 333, 481, 704, 751, 946, 1097, 1162, 1406
NlaIV	GGNNCC	3 cut(s)	59, 1031, 1325
NmuCI	GTSAC	3 cut(s)	125, 176, 1135
NsiI	ATGCAT	1 cut(s)	550
NspI	RCATGY	2 cut(s)	145, 184
PagI	TCATGA	1 cut(s)	642
PciI	ACATGT	2 cut(s)	141, 180
PcsI	WCGNNNNNNNCGW	1 cut(s)	1268
PfeI	GAWTC	3 cut(s)	646, 1066, 1173
PkrI	GCNGC	5 cut(s)	626, 939, 984, 1086, 1188
PmaCI	CACGTG	1 cut(s)	574
PmlI	CACGTG	1 cut(s)	574
Ppu21I	YACGTR	1 cut(s)	574
PpuMI	RGGWCCY	1 cut(s)	58
PscI	ACATGT	2 cut(s)	141, 180
Psp5II	RGGWCCY	1 cut(s)	58
Psp6I	CCWGG	1 cut(s)	942
PspCI	CACGTG	1 cut(s)	574
PspGI	CCWGG	1 cut(s)	942
PspN4I	GGNNCC	3 cut(s)	59, 1031, 1325
PspPI	GGNCC	3 cut(s)	49, 58, 733
PspPPI	RGGWCCY	1 cut(s)	58
PsrI	GAACNNNNNNTAC	2 cut(s)	1374, 1406
PstNI	CAGNNNCTG	1 cut(s)	943
PsuI	RGATCY	1 cut(s)	704
PvuII	CAGCTG	1 cut(s)	1280
RsaI	GTAC	3 cut(s)	393, 758, 1389
RsaNI	GTAC	3 cut(s)	392, 757, 1388
RseI	CAYNNNNRTG	1 cut(s)	174
SaqAI	TTAA	7 cut(s)	23, 71, 146, 189, 371, 537, 684
SatI	GCNGC	5 cut(s)	625, 938, 983, 1085, 1187
Sau3AI	GATC	9 cut(s)	88, 333, 481, 704, 751, 946, 1097, 1162, 1406
Sau96I	GGNCC	3 cut(s)	49, 58, 733
ScaI	AGTACT	2 cut(s)	758, 1389
ScrFI	CCNGG	1 cut(s)	944
SduI	GDGCHC	3 cut(s)	154, 579, 1311
SfaNI	GCATC	3 cut(s)	601, 1068, 1198
SinI	GGWCC	3 cut(s)	49, 58, 733
SmiMI	CAYNNNNRTG	1 cut(s)	174
SmlI	CTYRAG	1 cut(s)	62
SmoI	CTYRAG	1 cut(s)	62
SpeI	ACTAGT	1 cut(s)	265
Sse9I	AATT	8 cut(s)	112, 205, 496, 534, 618, 737, 1112, 1180
SsiI	CCGC	3 cut(s)	284, 624, 866
SspMI	CTAG	3 cut(s)	266, 650, 855
StyD4I	CCNGG	1 cut(s)	942
StyI	CCWWGG	1 cut(s)	699
TaaI	ACNGT	4 cut(s)	7, 391, 425, 656
TaiI	ACGT	5 cut(s)	48, 127, 383, 491, 576
TaqI	TCGA	2 cut(s)	358, 1405
TasI	AATT	8 cut(s)	112, 205, 496, 534, 618, 737, 1112, 1180
TatI	WGTACW	2 cut(s)	756, 1387
TauI	GCSGC	1 cut(s)	627
TfiI	GAWTC	3 cut(s)	646, 1066, 1173
Tru1I	TTAA	7 cut(s)	23, 71, 146, 189, 371, 537, 684
Tru9I	TTAA	7 cut(s)	23, 71, 146, 189, 371, 537, 684
TscAI	CASTG	2 cut(s)	661, 727
TseFI	GTSAC	3 cut(s)	125, 176, 1135
TseI	GCWGC	4 cut(s)	937, 982, 1084, 1186
Tsp45I	GTSAC	3 cut(s)	125, 176, 1135
TspDTI	ATGAA	2 cut(s)	782, 1247
TspGWI	ACGGA	2 cut(s)	511, 1054
TspRI	CASTG	2 cut(s)	661, 727
VneI	GTGCAC	1 cut(s)	575
VpaK11BI	GGWCC	3 cut(s)	49, 58, 733
XagI	CCTNNNNNAGG	1 cut(s)	817
XapI	RAATTY	3 cut(s)	112, 205, 496
XbaI	TCTAGA	1 cut(s)	649
XceI	RCATGY	2 cut(s)	145, 184
XcmI	CCANNNNNNNNNTGG	1 cut(s)	772
XmiI	GTMKAC	1 cut(s)	121
XspI	CTAG	3 cut(s)	266, 650, 855
ZraI	GACGTC	1 cut(s)	125
ZrmI	AGTACT	2 cut(s)	758, 1389
Zsp2I	ATGCAT	1 cut(s)	550

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.