Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1046 |
| AccI | GTMKAC | 2 cut(s) | 251, 1291 |
| AciI | CCGC | 4 cut(s) | 1110, 1282, 1363, 1433 |
| AclWI | GGATC | 3 cut(s) | 613, 626, 1071 |
| AcoI | YGGCCR | 1 cut(s) | 1631 |
| AcsI | RAATTY | 6 cut(s) | 321, 744, 1273, 1421, 1438, 1513 |
| AcuI | CTGAAG | 3 cut(s) | 848, 1083, 1332 |
| AfaI | GTAC | 4 cut(s) | 137, 1482, 1529, 1607 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 772, 1116 |
| AgeI | ACCGGT | 1 cut(s) | 1568 |
| AjiI | CACGTC | 1 cut(s) | 483 |
| AjnI | CCWGG | 2 cut(s) | 309, 1218 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 66, 98 |
| AleI | CACNNNNGTG | 1 cut(s) | 292 |
| AluBI | AGCT | 7 cut(s) | 34, 104, 653, 868, 1123, 1525, 1554 |
| AluI | AGCT | 7 cut(s) | 34, 104, 653, 868, 1123, 1525, 1554 |
| Alw26I | GTCTC | 5 cut(s) | 155, 323, 1082, 1495, 1604 |
| AlwI | GGATC | 3 cut(s) | 613, 626, 1071 |
| Ama87I | CYCGRG | 1 cut(s) | 1498 |
| AoxI | GGCC | 5 cut(s) | 141, 307, 443, 763, 1631 |
| ApeKI | GCWGC | 1 cut(s) | 1663 |
| ApoI | RAATTY | 6 cut(s) | 321, 744, 1273, 1421, 1438, 1513 |
| AseI | ATTAAT | 1 cut(s) | 555 |
| AsiGI | ACCGGT | 1 cut(s) | 1568 |
| AspA2I | CCTAGG | 1 cut(s) | 145 |
| AspLEI | GCGC | 1 cut(s) | 876 |
| AspS9I | GGNCC | 6 cut(s) | 142, 269, 307, 764, 1453, 1566 |
| AsuC2I | CCSGG | 1 cut(s) | 419 |
| AsuHPI | GGTGA | 3 cut(s) | 767, 1117, 1265 |
| AvaI | CYCGRG | 1 cut(s) | 1498 |
| AvaII | GGWCC | 3 cut(s) | 269, 1453, 1566 |
| AvrII | CCTAGG | 1 cut(s) | 145 |
| BalI | TGGCCA | 1 cut(s) | 1633 |
| BamHI | GGATCC | 1 cut(s) | 618 |
| BauI | CACGAG | 1 cut(s) | 1694 |
| BbsI | GAAGAC | 3 cut(s) | 189, 503, 924 |
| BbvI | GCAGC | 1 cut(s) | 1675 |
| BccI | CCATC | 6 cut(s) | 233, 416, 630, 672, 700, 755 |
| BciT130I | CCWGG | 2 cut(s) | 311, 1220 |
| BciVI | GTATCC | 1 cut(s) | 1475 |
| BclI | TGATCA | 1 cut(s) | 40 |
| BcnI | CCSGG | 1 cut(s) | 419 |
| BcoDI | GTCTC | 5 cut(s) | 155, 323, 1082, 1495, 1604 |
| BfaI | CTAG | 3 cut(s) | 146, 654, 1472 |
| BfmI | CTRYAG | 3 cut(s) | 252, 712, 1661 |
| BfoI | RGCGCY | 1 cut(s) | 877 |
| BfuI | GTATCC | 1 cut(s) | 1475 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1174 |
| BglII | AGATCT | 1 cut(s) | 367 |
| BisI | GCNGC | 3 cut(s) | 1283, 1363, 1664 |
| BlnI | CCTAGG | 1 cut(s) | 145 |
| BlsI | GCNGC | 3 cut(s) | 1284, 1364, 1665 |
| BmcAI | AGTACT | 1 cut(s) | 1607 |
| Bme1390I | CCNGG | 3 cut(s) | 311, 419, 1220 |
| Bme18I | GGWCC | 3 cut(s) | 269, 1453, 1566 |
| BmeT110I | CYCGRG | 1 cut(s) | 1498 |
| BmgBI | CACGTC | 1 cut(s) | 483 |
| BmgT120I | GGNCC | 6 cut(s) | 142, 269, 307, 764, 1453, 1566 |
| BmiI | GGNNCC | 3 cut(s) | 427, 620, 1567 |
| BmrFI | CCNGG | 3 cut(s) | 311, 419, 1220 |
| BmrI | ACTGGG | 3 cut(s) | 314, 1517, 1678 |
| BmsI | GCATC | 2 cut(s) | 584, 1083 |
| BmuI | ACTGGG | 3 cut(s) | 314, 1517, 1678 |
| BpiI | GAAGAC | 3 cut(s) | 189, 503, 924 |
| BpmI | CTGGAG | 1 cut(s) | 332 |
| BpuEI | CTTGAG | 2 cut(s) | 1073, 1586 |
| BpuMI | CCSGG | 1 cut(s) | 419 |
| BsaI | GGTCTC | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 6 cut(s) | 145, 339, 614, 639, 1219, 1459 |
| BsaWI | WCCGGW | 1 cut(s) | 1568 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 772, 1116 |
| Bse118I | RCCGGY | 1 cut(s) | 1568 |
| Bse1I | ACTGG | 5 cut(s) | 309, 461, 568, 1512, 1673 |
| BseBI | CCWGG | 2 cut(s) | 311, 1220 |
| BseDI | CCNNGG | 6 cut(s) | 145, 339, 614, 639, 1219, 1459 |
| BseGI | GGATG | 5 cut(s) | 225, 427, 575, 683, 916 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 772, 1116 |
| BseMII | CTCAG | 3 cut(s) | 980, 1009, 1300 |
| BseNI | ACTGG | 5 cut(s) | 309, 461, 568, 1512, 1673 |
| BseXI | GCAGC | 1 cut(s) | 1675 |
| BshFI | GGCC | 5 cut(s) | 143, 309, 445, 765, 1633 |
| BshTI | ACCGGT | 1 cut(s) | 1568 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1498 |
| BsiSI | CCGG | 2 cut(s) | 419, 1569 |
| BslFI | GGGAC | 3 cut(s) | 976, 1579, 1634 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 772, 1116 |
| BsmAI | GTCTC | 5 cut(s) | 155, 323, 1082, 1495, 1604 |
| BsmBI | CGTCTC | 2 cut(s) | 1082, 1604 |
| BsmFI | GGGAC | 3 cut(s) | 976, 1579, 1634 |
| BsmI | GAATGC | 1 cut(s) | 693 |
| BsnI | GGCC | 5 cut(s) | 143, 309, 445, 765, 1633 |
| Bso31I | GGTCTC | 1 cut(s) | 155 |
| BsoBI | CYCGRG | 1 cut(s) | 1498 |
| Bsp1407I | TGTACA | 2 cut(s) | 135, 1527 |
| Bsp19I | CCATGG | 1 cut(s) | 339 |
| BspACI | CCGC | 4 cut(s) | 1110, 1282, 1363, 1433 |
| BspANI | GGCC | 5 cut(s) | 143, 309, 445, 765, 1633 |
| BspCNI | CTCAG | 3 cut(s) | 979, 1008, 1299 |
| BspHI | TCATGA | 1 cut(s) | 153 |
| BspLI | GGNNCC | 3 cut(s) | 427, 620, 1567 |
| BspMAI | CTGCAG | 1 cut(s) | 1665 |
| BspPI | GGATC | 3 cut(s) | 613, 626, 1071 |
| BspTNI | GGTCTC | 1 cut(s) | 155 |
| BsrFI | RCCGGY | 1 cut(s) | 1568 |
| BsrGI | TGTACA | 2 cut(s) | 135, 1527 |
| BsrI | ACTGG | 5 cut(s) | 309, 461, 568, 1512, 1673 |
| BssAI | RCCGGY | 1 cut(s) | 1568 |
| BssECI | CCNNGG | 6 cut(s) | 145, 339, 614, 639, 1219, 1459 |
| BssNAI | GTATAC | 1 cut(s) | 1292 |
| BssSI | CACGAG | 1 cut(s) | 1694 |
| BssT1I | CCWWGG | 5 cut(s) | 145, 339, 614, 639, 1459 |
| Bst1107I | GTATAC | 1 cut(s) | 1292 |
| Bst2BI | CACGAG | 1 cut(s) | 1694 |
| Bst2UI | CCWGG | 2 cut(s) | 311, 1220 |
| Bst4CI | ACNGT | 2 cut(s) | 256, 1691 |
| Bst6I | CTCTTC | 3 cut(s) | 434, 501, 1195 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 688 |
| BstAUI | TGTACA | 2 cut(s) | 135, 1527 |
| BstC8I | GCNNGC | 4 cut(s) | 720, 724, 878, 1166 |
| BstDEI | CTNAG | 7 cut(s) | 727, 966, 989, 995, 1084, 1286, 1555 |
| BstDSI | CCRYGG | 1 cut(s) | 339 |
| BstF5I | GGATG | 5 cut(s) | 225, 427, 575, 683, 916 |
| BstH2I | RGCGCY | 1 cut(s) | 877 |
| BstHHI | GCGC | 1 cut(s) | 876 |
| BstMAI | GTCTC | 5 cut(s) | 155, 323, 1082, 1495, 1604 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 650, 688, 1174 |
| BstNI | CCWGG | 2 cut(s) | 311, 1220 |
| BstNSI | RCATGY | 3 cut(s) | 726, 1077, 1168 |
| BstSCI | CCNGG | 3 cut(s) | 309, 417, 1218 |
| BstSFI | CTRYAG | 3 cut(s) | 252, 712, 1661 |
| BstV1I | GCAGC | 1 cut(s) | 1675 |
| BstV2I | GAAGAC | 3 cut(s) | 189, 503, 924 |
| BstX2I | RGATCY | 3 cut(s) | 367, 618, 1063 |
| BstYI | RGATCY | 3 cut(s) | 367, 618, 1063 |
| BstZ17I | GTATAC | 1 cut(s) | 1292 |
| BsuI | GTATCC | 1 cut(s) | 1475 |
| BsuRI | GGCC | 5 cut(s) | 143, 309, 445, 765, 1633 |
| BtgI | CCRYGG | 1 cut(s) | 339 |
| BtrI | CACGTC | 1 cut(s) | 483 |
| BtsCI | GGATG | 5 cut(s) | 225, 427, 575, 683, 916 |
| BtsIMutI | CAGTG | 2 cut(s) | 1666, 1687 |
| Cac8I | GCNNGC | 4 cut(s) | 720, 724, 878, 1166 |
| CciI | TCATGA | 1 cut(s) | 153 |
| CfoI | GCGC | 1 cut(s) | 876 |
| Cfr10I | RCCGGY | 1 cut(s) | 1568 |
| Cfr13I | GGNCC | 6 cut(s) | 142, 269, 307, 764, 1453, 1566 |
| CseI | GACGC | 1 cut(s) | 1586 |
| Csp6I | GTAC | 4 cut(s) | 136, 1481, 1528, 1606 |
| CspAI | ACCGGT | 1 cut(s) | 1568 |
| CviAII | CATG | 9 cut(s) | 154, 218, 340, 379, 723, 1074, 1165, 1297, 1562 |
| CviQI | GTAC | 4 cut(s) | 136, 1481, 1528, 1606 |
| DdeI | CTNAG | 7 cut(s) | 727, 966, 989, 995, 1084, 1286, 1555 |
| DraI | TTTAAA | 2 cut(s) | 1278, 1518 |
| EaeI | YGGCCR | 1 cut(s) | 1631 |
| Eam1104I | CTCTTC | 3 cut(s) | 434, 501, 1195 |
| EarI | CTCTTC | 3 cut(s) | 434, 501, 1195 |
| EciI | GGCGGA | 1 cut(s) | 1422 |
| Eco130I | CCWWGG | 5 cut(s) | 145, 339, 614, 639, 1459 |
| Eco147I | AGGCCT | 1 cut(s) | 445 |
| Eco31I | GGTCTC | 1 cut(s) | 155 |
| Eco32I | GATATC | 1 cut(s) | 1105 |
| Eco47I | GGWCC | 3 cut(s) | 269, 1453, 1566 |
| Eco57I | CTGAAG | 3 cut(s) | 848, 1083, 1332 |
| Eco88I | CYCGRG | 1 cut(s) | 1498 |
| EcoO109I | RGGNCCY | 1 cut(s) | 142 |
| EcoRI | GAATTC | 1 cut(s) | 1421 |
| EcoRII | CCWGG | 2 cut(s) | 309, 1218 |
| EcoRV | GATATC | 1 cut(s) | 1105 |
| EcoT14I | CCWWGG | 5 cut(s) | 145, 339, 614, 639, 1459 |
| EcoT22I | ATGCAT | 1 cut(s) | 577 |
| ErhI | CCWWGG | 5 cut(s) | 145, 339, 614, 639, 1459 |
| Esp3I | CGTCTC | 2 cut(s) | 1082, 1604 |
| FaeI | CATG | 9 cut(s) | 157, 221, 343, 382, 726, 1077, 1168, 1300, 1565 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 80, 112, 343, 375, 380, 412 |
| FaqI | GGGAC | 3 cut(s) | 976, 1579, 1634 |
| FatI | CATG | 9 cut(s) | 153, 217, 339, 378, 722, 1073, 1164, 1296, 1561 |
| FbaI | TGATCA | 1 cut(s) | 40 |
| FblI | GTMKAC | 2 cut(s) | 251, 1291 |
| Fnu4HI | GCNGC | 3 cut(s) | 1283, 1363, 1664 |
| FokI | GGATG | 5 cut(s) | 212, 434, 562, 690, 923 |
| Fsp4HI | GCNGC | 3 cut(s) | 1283, 1363, 1664 |
| FspBI | CTAG | 3 cut(s) | 146, 654, 1472 |
| GlaI | GCGC | 1 cut(s) | 875 |
| GluI | GCNGC | 3 cut(s) | 1283, 1363, 1664 |
| GsuI | CTGGAG | 1 cut(s) | 332 |
| HaeII | RGCGCY | 1 cut(s) | 877 |
| HaeIII | GGCC | 5 cut(s) | 143, 309, 445, 765, 1633 |
| HapII | CCGG | 2 cut(s) | 419, 1569 |
| HgaI | GACGC | 1 cut(s) | 1586 |
| HhaI | GCGC | 1 cut(s) | 876 |
| Hin1II | CATG | 9 cut(s) | 157, 221, 343, 382, 726, 1077, 1168, 1300, 1565 |
| Hin6I | GCGC | 1 cut(s) | 874 |
| HinP1I | GCGC | 1 cut(s) | 874 |
| HincII | GTYRAC | 1 cut(s) | 486 |
| HindII | GTYRAC | 1 cut(s) | 486 |
| HinfI | GANTC | 8 cut(s) | 185, 233, 331, 671, 884, 964, 1057, 1307 |
| HpaII | CCGG | 2 cut(s) | 419, 1569 |
| HphI | GGTGA | 3 cut(s) | 767, 1117, 1265 |
| Hpy166II | GTNNAC | 7 cut(s) | 63, 252, 486, 775, 928, 1247, 1292 |
| Hpy188I | TCNGA | 9 cut(s) | 174, 279, 450, 969, 998, 1102, 1144, 1206, 1312 |
| Hpy188III | TCNNGA | 7 cut(s) | 154, 267, 371, 675, 1008, 1061, 1694 |
| Hpy8I | GTNNAC | 7 cut(s) | 63, 252, 486, 775, 928, 1247, 1292 |
| HpyAV | CCTTC | 6 cut(s) | 844, 1035, 1107, 1336, 1576, 1636 |
| HpyCH4III | ACNGT | 2 cut(s) | 256, 1691 |
| HpyCH4IV | ACGT | 3 cut(s) | 482, 1479, 1710 |
| HpyCH4V | TGCA | 6 cut(s) | 221, 244, 575, 722, 808, 1663 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 650, 688, 1174 |
| HpyF3I | CTNAG | 7 cut(s) | 727, 966, 989, 995, 1084, 1286, 1555 |
| HpySE526I | ACGT | 3 cut(s) | 482, 1479, 1710 |
| Hsp92II | CATG | 9 cut(s) | 157, 221, 343, 382, 726, 1077, 1168, 1300, 1565 |
| HspAI | GCGC | 1 cut(s) | 874 |
| Ksp22I | TGATCA | 1 cut(s) | 40 |
| LmnI | GCTCC | 2 cut(s) | 101, 1200 |
| Lsp1109I | GCAGC | 1 cut(s) | 1675 |
| LweI | GCATC | 2 cut(s) | 584, 1083 |
| MaeI | CTAG | 3 cut(s) | 146, 654, 1472 |
| MaeII | ACGT | 3 cut(s) | 482, 1479, 1710 |
| MaeIII | GTNAC | 5 cut(s) | 234, 285, 297, 1076, 1691 |
| MflI | RGATCY | 3 cut(s) | 367, 618, 1063 |
| MlsI | TGGCCA | 1 cut(s) | 1633 |
| MluNI | TGGCCA | 1 cut(s) | 1633 |
| MlyI | GAGTC | 6 cut(s) | 179, 242, 325, 878, 958, 1316 |
| MmeI | TCCRAC | 1 cut(s) | 1122 |
| Mox20I | TGGCCA | 1 cut(s) | 1633 |
| Mph1103I | ATGCAT | 1 cut(s) | 577 |
| MscI | TGGCCA | 1 cut(s) | 1633 |
| MslI | CAYNNNNRTG | 1 cut(s) | 292 |
| Msp20I | TGGCCA | 1 cut(s) | 1633 |
| MspI | CCGG | 2 cut(s) | 419, 1569 |
| MspR9I | CCNGG | 3 cut(s) | 311, 419, 1220 |
| Mva1269I | GAATGC | 1 cut(s) | 693 |
| MvaI | CCWGG | 2 cut(s) | 311, 1220 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 650, 688, 1174 |
| NciI | CCSGG | 1 cut(s) | 419 |
| NcoI | CCATGG | 1 cut(s) | 339 |
| NlaIII | CATG | 9 cut(s) | 157, 221, 343, 382, 726, 1077, 1168, 1300, 1565 |
| NlaIV | GGNNCC | 3 cut(s) | 427, 620, 1567 |
| NmeAIII | GCCGAG | 1 cut(s) | 866 |
| NmuCI | GTSAC | 5 cut(s) | 234, 285, 297, 1076, 1691 |
| NsiI | ATGCAT | 1 cut(s) | 577 |
| NspI | RCATGY | 3 cut(s) | 726, 1077, 1168 |
| OliI | CACNNNNGTG | 1 cut(s) | 292 |
| PaeI | GCATGC | 2 cut(s) | 726, 1168 |
| PagI | TCATGA | 1 cut(s) | 153 |
| PceI | AGGCCT | 1 cut(s) | 445 |
| PctI | GAATGC | 1 cut(s) | 693 |
| PfeI | GAWTC | 2 cut(s) | 671, 1057 |
| PfoI | TCCNGGA | 1 cut(s) | 417 |
| PinAI | ACCGGT | 1 cut(s) | 1568 |
| PkrI | GCNGC | 3 cut(s) | 1284, 1364, 1665 |
| PleI | GAGTC | 6 cut(s) | 179, 241, 325, 878, 958, 1315 |
| PpsI | GAGTC | 6 cut(s) | 179, 241, 325, 878, 958, 1315 |
| PshBI | ATTAAT | 1 cut(s) | 555 |
| PsiI | TTATAA | 1 cut(s) | 1046 |
| Psp6I | CCWGG | 2 cut(s) | 309, 1218 |
| PspGI | CCWGG | 2 cut(s) | 309, 1218 |
| PspN4I | GGNNCC | 3 cut(s) | 427, 620, 1567 |
| PspPI | GGNCC | 6 cut(s) | 142, 269, 307, 764, 1453, 1566 |
| PstI | CTGCAG | 1 cut(s) | 1665 |
| PsuI | RGATCY | 3 cut(s) | 367, 618, 1063 |
| RsaI | GTAC | 4 cut(s) | 137, 1482, 1529, 1607 |
| RsaNI | GTAC | 4 cut(s) | 136, 1481, 1528, 1606 |
| RseI | CAYNNNNRTG | 1 cut(s) | 292 |
| SatI | GCNGC | 3 cut(s) | 1283, 1363, 1664 |
| Sau96I | GGNCC | 6 cut(s) | 142, 269, 307, 764, 1453, 1566 |
| ScaI | AGTACT | 1 cut(s) | 1607 |
| SchI | GAGTC | 6 cut(s) | 179, 242, 325, 878, 958, 1316 |
| ScrFI | CCNGG | 3 cut(s) | 311, 419, 1220 |
| SfaNI | GCATC | 2 cut(s) | 584, 1083 |
| SfcI | CTRYAG | 3 cut(s) | 252, 712, 1661 |
| SinI | GGWCC | 3 cut(s) | 269, 1453, 1566 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 292 |
| SmlI | CTYRAG | 2 cut(s) | 1052, 1601 |
| SmoI | CTYRAG | 2 cut(s) | 1052, 1601 |
| SphI | GCATGC | 2 cut(s) | 726, 1168 |
| SseBI | AGGCCT | 1 cut(s) | 445 |
| SsiI | CCGC | 4 cut(s) | 1110, 1282, 1363, 1433 |
| SspMI | CTAG | 3 cut(s) | 146, 654, 1472 |
| StuI | AGGCCT | 1 cut(s) | 445 |
| StyD4I | CCNGG | 3 cut(s) | 309, 417, 1218 |
| StyI | CCWWGG | 5 cut(s) | 145, 339, 614, 639, 1459 |
| TaaI | ACNGT | 2 cut(s) | 256, 1691 |
| TaiI | ACGT | 3 cut(s) | 485, 1482, 1713 |
| TaqI | TCGA | 4 cut(s) | 53, 168, 258, 1069 |
| TatI | WGTACW | 3 cut(s) | 135, 1527, 1605 |
| TauI | GCSGC | 2 cut(s) | 1285, 1365 |
| TfiI | GAWTC | 2 cut(s) | 671, 1057 |
| TscAI | CASTG | 2 cut(s) | 1673, 1694 |
| TseFI | GTSAC | 5 cut(s) | 234, 285, 297, 1076, 1691 |
| TseI | GCWGC | 1 cut(s) | 1663 |
| Tsp45I | GTSAC | 5 cut(s) | 234, 285, 297, 1076, 1691 |
| TspDTI | ATGAA | 7 cut(s) | 170, 378, 449, 466, 930, 1341, 1434 |
| TspGWI | ACGGA | 3 cut(s) | 418, 576, 1384 |
| TspRI | CASTG | 2 cut(s) | 1673, 1694 |
| VpaK11BI | GGWCC | 3 cut(s) | 269, 1453, 1566 |
| VspI | ATTAAT | 1 cut(s) | 555 |
| XapI | RAATTY | 6 cut(s) | 321, 744, 1273, 1421, 1438, 1513 |
| XceI | RCATGY | 3 cut(s) | 726, 1077, 1168 |
| XmaJI | CCTAGG | 1 cut(s) | 145 |
| XmiI | GTMKAC | 2 cut(s) | 251, 1291 |
| XspI | CTAG | 3 cut(s) | 146, 654, 1472 |
| ZrmI | AGTACT | 1 cut(s) | 1607 |
| Zsp2I | ATGCAT | 1 cut(s) | 577 |