RchiOBHm_Chr4g0414121

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0001472
Physical Location & Seq
Reverse (-)
38498762 .. 38502330
3569 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1905 bp
ATGCCTTTGAAGGCGAGGATGTTCTCTACAATTGTCTCTGTAAGAGCCCCAGCGCTTCTCTACAAATGTAAGCCTCCTTTCCATTCTCTTTTTGGGTCTGTCAGAACCCAGTGTCGCTCTTCTTTTGCTGTCAATCATTCTCACATTGACGCCACTAATTTTGAGGAATTGGTAGACATTCGTTATAAATCTGGTTGTCTTAGGTTAGATGAAGCATTGGGTTACTTCAATTCCATGATTCAAATGAAACCCATCCCCTCCATCAGGGCTTTTAATGGTTTGTTGGGGGTACTCTCCAAGATGAAGCATTACTCCACTGTTGTTTCTATGTGTAAGCAGCTGATGAGTACTGCTCACTTCCAACCTGATGTTTGTACAATAAGTATTATCATTAATTGCTTGTGCCGTCTGAATCGGGTGGACTTGGGTTTCTCTGCTTTAGGAATTGCTCTTAAACATGGTTTTCAACTTGGTGGTTATTCTCTGAATCCTTTGCTTCACGGGCTTTGCAAGAATAGCTGTCTTGCTGAAGCAGTGAAGCTGGTCCAGAAAATGGAAGATAAGGGATACACATGTGATGTATTCACTTATGGTATCGTAATTAATGGGTTATGCAAAGCTGGGAAGACTACTAATGCAATCAAGATACTTGAGCAGATGTATGGTAATGGAAGGTTTAAGCCGAATTCGGATTGCTACAATCCAATCATTGACAGCCTTTGTAAAGAAAGAAATATCAAGCAGGCCTTGACCCTATTTGAAGATATGATCAGCAGAAGTGTAGTACCGGATGCCTACACTTATAATTCATTAATTCGTGGATTATGCAATATGGGTGATTGGGATAAAGTTCTCGATCTGTTCGAAACAATGAAGGATCAAGGAATTGCCCCCGATGTTGTCACCTTCAACACCCTAATATACGGACTTTGCCAATCAGGGAAGTGGGAAAAGGCCCAAAGATTCTTGTCTTGCATGGTTGAGAGTGGAATTTCACCAGATGTGTATACCTACAATGCCCTAATCAGCAGTCATTGCAAGTCTGGTCAATGGGAAAAGGCTGTACAGTTATTTAAAAGTATGATTGAATGTGGAATCTTGCCCAATATTGTTACATTCAATGCTGTGTTGGATGCTTTATGCAAGGGAGGAAAAACAACAGAGGCACTTAATCTTGTGGAACAAATGATCCATAGAGGTGTAAAACCTGATCTTGTCACCTACAATTCATTACTTCATGGATTGTGCCTTTCTGGCCAATGGAGAGGGGCAACAAGCTTGCTTAATAGAATGAAGGATGAAGAAGTCCCACCAGATGTTGTAACCTTTAACTCTGTAATAGATGCTCTTTGCAAGAAGGGAAGGACCAAGGACGCCCTCACTGTTTTGCAGGTAATGACTCAAAGAGATCTAAATCCTGACCATATCACTTACAGCTGTCTAATTTATGGCATGTGCAATACATCACAATGGGGTGAAGCGACAAGGTTGTTTGATGAAATGGTAGGGCTGGGCATCTTGCCCAATATATTAACTTTGACAGACCTGTTTGATGCTCTCTCCAAAGAAGGGATGACAGAAGAGGCTCGCAAAGCATTTGAAGAAAGATTTCAATATGGTATGGAGGTTAGCAAGATCTCATTCAACATGCTACTTCATGATTATTGTTTGCATGGAAAAATTGACAAGGCAGAGAAGGTCTTTAGTTTTATGGTGTTGAAGGGTCATATTCCTGATATGGCTTCCTATACAACCTTGGTCAATAGCTATATAAAAGTTAACAGAATACATGAAGCTTTGAGGCTTGTTAAGGAAATGATCCAAAAGGGATTGATGCCTGATCTGCAAACGCTGAAAACTTTGAGAAGTTTCAGTCCTAAAAGACATGCTGCATCTGCAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_1 PPR_2 PPR_3

Protein Analysis

634

Amino Acids

71.02

Weight (kDa)

8.58

Isoelectric Point (pI)

30.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 162 - 206 3.4e-12 PPR repeat family
PPR_3 PF13812 180 - 238 2.1e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 188 - 220 4.1e-10 PPR repeat
PPR_1 PF12854 226 - 256 4.6e-07 PPR repeat
PPR_2 PF13041 228 - 277 5.3e-17 PPR repeat family
TPR_24 PF23276 233 - 319 7e-06 Fungal tetratrico peptide repeats
PPR_long PF17177 242 - 357 4.3e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 252 - 307 2e-11 Pentatricopeptide repeat domain
PPR_1 PF12854 260 - 292 4.8e-09 PPR repeat
TPR_24 PF23276 261 - 361 5e-08 Fungal tetratrico peptide repeats
PPR PF01535 266 - 296 9.8e-09 PPR repeat
PPR_2 PF13041 267 - 312 7.9e-17 PPR repeat family
PPR_long PF17177 279 - 420 1.1e-10 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 295 - 327 6.7e-12 PPR repeat
PPR_2 PF13041 298 - 347 8.8e-18 PPR repeat family
PPR PF01535 301 - 331 1.5e-07 PPR repeat
PPR_3 PF13812 325 - 380 8.2e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 330 - 361 5.1e-12 PPR repeat
PPR_2 PF13041 335 - 382 1.5e-16 PPR repeat family
PPR PF01535 336 - 366 2.2e-10 PPR repeat
PPR_long PF17177 353 - 456 2.3e-06 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 365 - 396 1.4e-08 PPR repeat
PPR_2 PF13041 368 - 416 3.9e-17 PPR repeat family
PPR PF01535 371 - 401 4.1e-06 PPR repeat
TPR_24 PF23276 372 - 460 3.5e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 392 - 450 7.7e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 399 - 432 4.7e-10 PPR repeat
PPR_2 PF13041 404 - 452 2.6e-15 PPR repeat family
PPR PF01535 406 - 434 2.3e-06 PPR repeat
PPR_1 PF12854 436 - 466 1.5e-10 PPR repeat
PPR_2 PF13041 438 - 487 7.6e-16 PPR repeat family
PPR PF01535 441 - 470 1e-05 PPR repeat
TPR_24 PF23276 454 - 568 7.4e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 470 - 502 2.8e-08 PPR repeat
PPR_2 PF13041 480 - 522 6.3e-07 PPR repeat family
PPR_1 PF12854 540 - 572 6.3e-06 PPR repeat
PPR_2 PF13041 546 - 591 3e-09 PPR repeat family
PPR_1 PF12854 574 - 606 4.2e-06 PPR repeat
PPR_2 PF13041 578 - 621 1.1e-08 PPR repeat family
PPR PF01535 582 - 611 8.9e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 186, 804
Acc36I ACCTGC 1 cut(s) 1381
AccB7I CCANNNNNTGG 1 cut(s) 553
AccI GTMKAC 2 cut(s) 174, 1007
AclWI GGATC 3 cut(s) 885, 1183, 1813
AcoI YGGCCR 1 cut(s) 1255
AcsI RAATTY 2 cut(s) 685, 990
AcuI CTGAAG 1 cut(s) 549
AcyI GRCGYC 2 cut(s) 150, 1374
AfaI GTAC 5 cut(s) 291, 349, 376, 786, 1065
AfeI AGCGCT 1 cut(s) 54
AfiI CCNNNNNNNGG 3 cut(s) 264, 553, 1569
AflIII ACRYGT 1 cut(s) 572
AloI GAACNNNNNNTCC 2 cut(s) 1173, 1205
AluBI AGCT 8 cut(s) 340, 519, 541, 620, 1278, 1437, 1767, 1796
AluI AGCT 8 cut(s) 340, 519, 541, 620, 1278, 1437, 1767, 1796
Alw26I GTCTC 1 cut(s) 40
AlwI GGATC 3 cut(s) 885, 1183, 1813
Aor51HI AGCGCT 1 cut(s) 54
AoxI GGCC 3 cut(s) 744, 954, 1255
ApeKI GCWGC 2 cut(s) 337, 1889
ApoI RAATTY 2 cut(s) 685, 990
AseI ATTAAT 3 cut(s) 393, 603, 812
Asp700I GAANNNNTTC 1 cut(s) 1608
AspLEI GCGC 1 cut(s) 55
AspS9I GGNCC 3 cut(s) 544, 955, 1365
AsuHPI GGTGA 5 cut(s) 848, 895, 987, 1210, 1487
AsuII TTCGAA 1 cut(s) 864
AvaII GGWCC 2 cut(s) 544, 1365
BaeI ACNNNNGTAYC 2 cut(s) 559, 592
BalI TGGCCA 1 cut(s) 1257
BanII GRGCYC 1 cut(s) 49
BbsI GAAGAC 1 cut(s) 632
BbvI GCAGC 2 cut(s) 349, 1876
BccI CCATC 2 cut(s) 260, 269
BceAI ACGGC 1 cut(s) 390
BciVI GTATCC 1 cut(s) 560
BclI TGATCA 1 cut(s) 768
BcoDI GTCTC 1 cut(s) 40
BfmI CTRYAG 1 cut(s) 1896
BfoI RGCGCY 1 cut(s) 56
BfuAI ACCTGC 1 cut(s) 1381
BfuI GTATCC 1 cut(s) 560
BglI GCCNNNNNGGC 1 cut(s) 1254
BglII AGATCT 2 cut(s) 1408, 1635
BisI GCNGC 2 cut(s) 338, 1890
BlsI GCNGC 2 cut(s) 339, 1891
BmcAI AGTACT 1 cut(s) 349
Bme18I GGWCC 2 cut(s) 544, 1365
BmgT120I GGNCC 3 cut(s) 544, 955, 1365
BmrI ACTGGG 1 cut(s) 103
BmsI GCATC 7 cut(s) 781, 1123, 1333, 1524, 1543, 1824, 1901
BmuI ACTGGG 1 cut(s) 103
BpiI GAAGAC 1 cut(s) 632
BplI GAGNNNNNCTC 2 cut(s) 337, 369
Bpu14I TTCGAA 1 cut(s) 864
BpuEI CTTGAG 1 cut(s) 671
BsaBI GATNNNNATC 1 cut(s) 1413
BsaHI GRCGYC 2 cut(s) 150, 1374
BsaJI CCNNGG 2 cut(s) 1368, 1755
BsaWI WCCGGW 1 cut(s) 787
Bsc4I CCNNNNNNNGG 3 cut(s) 264, 553, 1569
Bse1I ACTGG 1 cut(s) 109
Bse3DI GCAATG 1 cut(s) 1033
Bse8I GATNNNNATC 1 cut(s) 1413
BseDI CCNNGG 2 cut(s) 1368, 1755
BseGI GGATG 6 cut(s) 24, 252, 796, 1138, 1303, 1578
BseJI GATNNNNATC 1 cut(s) 1413
BseLI CCNNNNNNNGG 3 cut(s) 264, 553, 1569
BseMI GCAATG 1 cut(s) 1033
BseNI ACTGG 1 cut(s) 109
BseXI GCAGC 2 cut(s) 349, 1876
BseYI CCCAGC 3 cut(s) 49, 620, 1510
BshFI GGCC 3 cut(s) 746, 956, 1257
BsiSI CCGG 1 cut(s) 788
BslFI GGGAC 1 cut(s) 1292
BslI CCNNNNNNNGG 3 cut(s) 264, 553, 1569
BsmAI GTCTC 1 cut(s) 40
BsmFI GGGAC 1 cut(s) 1292
BsnI GGCC 3 cut(s) 746, 956, 1257
Bsp119I TTCGAA 1 cut(s) 864
Bsp1286I GDGCHC 1 cut(s) 49
Bsp1407I TGTACA 2 cut(s) 374, 1063
Bsp143I GATC 9 cut(s) 768, 856, 877, 1188, 1210, 1408, 1635, 1818, 1840
BspANI GGCC 3 cut(s) 746, 956, 1257
BspHI TCATGA 1 cut(s) 1657
BspMAI CTGCAG 1 cut(s) 1900
BspMI ACCTGC 1 cut(s) 1381
BspPI GGATC 3 cut(s) 885, 1183, 1813
BspQI GCTCTTC 1 cut(s) 124
BspT104I TTCGAA 1 cut(s) 864
BsrDI GCAATG 1 cut(s) 1033
BsrGI TGTACA 2 cut(s) 374, 1063
BsrI ACTGG 1 cut(s) 109
BssECI CCNNGG 2 cut(s) 1368, 1755
BssMI GATC 9 cut(s) 768, 856, 877, 1188, 1210, 1408, 1635, 1818, 1840
BssNAI GTATAC 1 cut(s) 1008
BssNI GRCGYC 2 cut(s) 150, 1374
BssT1I CCWWGG 2 cut(s) 1368, 1755
Bst1107I GTATAC 1 cut(s) 1008
Bst4CI ACNGT 3 cut(s) 319, 1068, 1384
Bst6I CTCTTC 2 cut(s) 124, 1575
BstACI GRCGYC 2 cut(s) 150, 1374
BstAPI GCANNNNNTGC 1 cut(s) 1035
BstAUI TGTACA 2 cut(s) 374, 1063
BstBI TTCGAA 1 cut(s) 864
BstC8I GCNNGC 3 cut(s) 744, 1280, 1588
BstDEI CTNAG 1 cut(s) 200
BstENI CCTNNNNNAGG 1 cut(s) 262
BstF5I GGATG 6 cut(s) 24, 252, 796, 1138, 1303, 1578
BstH2I RGCGCY 1 cut(s) 56
BstHHI GCGC 1 cut(s) 55
BstKTI GATC 9 cut(s) 771, 859, 880, 1191, 1213, 1411, 1638, 1821, 1843
BstMAI GTCTC 1 cut(s) 40
BstMBI GATC 9 cut(s) 768, 856, 877, 1188, 1210, 1408, 1635, 1818, 1840
BstMWI GCNNNNNNNGC 7 cut(s) 502, 516, 1035, 1254, 1592, 1843, 1895
BstNSI RCATGY 4 cut(s) 576, 1456, 1651, 1889
BstSFI CTRYAG 1 cut(s) 1896
BstV1I GCAGC 2 cut(s) 349, 1876
BstV2I GAAGAC 1 cut(s) 632
BstX2I RGATCY 2 cut(s) 1408, 1635
BstYI RGATCY 2 cut(s) 1408, 1635
BstZ17I GTATAC 1 cut(s) 1008
BsuI GTATCC 1 cut(s) 560
BsuRI GGCC 3 cut(s) 746, 956, 1257
BtsCI GGATG 6 cut(s) 24, 252, 796, 1138, 1303, 1578
BtsI GCAGTG 1 cut(s) 540
BtsIMutI CAGTG 4 cut(s) 116, 315, 540, 1380
BveI ACCTGC 1 cut(s) 1381
Cac8I GCNNGC 3 cut(s) 744, 1280, 1588
CciI TCATGA 1 cut(s) 1657
CfoI GCGC 1 cut(s) 55
Cfr13I GGNCC 3 cut(s) 544, 955, 1365
CseI GACGC 2 cut(s) 158, 1382
Csp6I GTAC 5 cut(s) 290, 348, 375, 785, 1064
CspCI CAANNNNNGTGG 2 cut(s) 142, 177
CviQI GTAC 5 cut(s) 290, 348, 375, 785, 1064
DdeI CTNAG 1 cut(s) 200
DpnI GATC 9 cut(s) 770, 858, 879, 1190, 1212, 1410, 1637, 1820, 1842
DpnII GATC 9 cut(s) 768, 856, 877, 1188, 1210, 1408, 1635, 1818, 1840
DraI TTTAAA 1 cut(s) 1075
EaeI YGGCCR 1 cut(s) 1255
Eam1104I CTCTTC 2 cut(s) 124, 1575
EarI CTCTTC 2 cut(s) 124, 1575
Eco130I CCWWGG 2 cut(s) 1368, 1755
Eco147I AGGCCT 1 cut(s) 746
Eco24I GRGCYC 1 cut(s) 49
Eco47I GGWCC 2 cut(s) 544, 1365
Eco47III AGCGCT 1 cut(s) 54
Eco57I CTGAAG 1 cut(s) 549
EcoNI CCTNNNNNAGG 1 cut(s) 262
EcoRI GAATTC 1 cut(s) 685
EcoT14I CCWWGG 2 cut(s) 1368, 1755
EcoT38I GRGCYC 1 cut(s) 49
ErhI CCWWGG 2 cut(s) 1368, 1755
FalI AAGNNNNNCTT 2 cut(s) 731, 763
FaqI GGGAC 1 cut(s) 1292
FbaI TGATCA 1 cut(s) 768
FblI GTMKAC 2 cut(s) 174, 1007
Fnu4HI GCNGC 2 cut(s) 338, 1890
FokI GGATG 6 cut(s) 31, 239, 803, 1145, 1310, 1585
FriOI GRGCYC 1 cut(s) 49
Fsp4HI GCNGC 2 cut(s) 338, 1890
GlaI GCGC 1 cut(s) 54
GluI GCNGC 2 cut(s) 338, 1890
GsaI CCCAGC 3 cut(s) 53, 624, 1514
HaeII RGCGCY 1 cut(s) 56
HaeIII GGCC 3 cut(s) 746, 956, 1257
HapII CCGG 1 cut(s) 788
HgaI GACGC 2 cut(s) 158, 1382
HhaI GCGC 1 cut(s) 55
Hin1I GRCGYC 2 cut(s) 150, 1374
Hin6I GCGC 1 cut(s) 53
HinP1I GCGC 1 cut(s) 53
HincII GTYRAC 1 cut(s) 1780
HindII GTYRAC 1 cut(s) 1780
HindIII AAGCTT 2 cut(s) 1276, 1794
HinfI GANTC 6 cut(s) 238, 412, 487, 963, 1095, 1399
HpaI GTTAAC 1 cut(s) 1780
HpaII CCGG 1 cut(s) 788
HphI GGTGA 5 cut(s) 848, 895, 987, 1210, 1487
Hpy166II GTNNAC 4 cut(s) 175, 421, 1008, 1780
Hpy188I TCNGA 4 cut(s) 104, 411, 486, 691
Hpy188III TCNNGA 6 cut(s) 547, 643, 854, 1418, 1658, 1733
Hpy8I GTNNAC 4 cut(s) 175, 421, 1008, 1780
HpyCH4III ACNGT 3 cut(s) 319, 1068, 1384
HpyF10VI GCNNNNNNNGC 7 cut(s) 502, 516, 1035, 1254, 1592, 1843, 1895
HpyF3I CTNAG 1 cut(s) 200
Hsp92I GRCGYC 2 cut(s) 150, 1374
HspAI GCGC 1 cut(s) 53
Ksp22I TGATCA 1 cut(s) 768
KspAI GTTAAC 1 cut(s) 1780
Kzo9I GATC 9 cut(s) 768, 856, 877, 1188, 1210, 1408, 1635, 1818, 1840
LguI GCTCTTC 1 cut(s) 124
Lsp1109I GCAGC 2 cut(s) 349, 1876
LweI GCATC 7 cut(s) 781, 1123, 1333, 1524, 1543, 1824, 1901
MaeIII GTNAC 5 cut(s) 221, 901, 1111, 1216, 1321
MalI GATC 9 cut(s) 770, 858, 879, 1190, 1212, 1410, 1637, 1820, 1842
MboI GATC 9 cut(s) 768, 856, 877, 1188, 1210, 1408, 1635, 1818, 1840
MboII GAAGA 7 cut(s) 111, 569, 637, 773, 1313, 1592, 1613
MfeI CAATTG 1 cut(s) 30
MflI RGATCY 2 cut(s) 1408, 1635
MhlI GDGCHC 1 cut(s) 49
MlsI TGGCCA 1 cut(s) 1257
MluNI TGGCCA 1 cut(s) 1257
MlyI GAGTC 1 cut(s) 1393
MmeI TCCRAC 2 cut(s) 385, 1110
Mox20I TGGCCA 1 cut(s) 1257
MroXI GAANNNNTTC 1 cut(s) 1608
MscI TGGCCA 1 cut(s) 1257
MslI CAYNNNNRTG 2 cut(s) 1197, 1468
Msp20I TGGCCA 1 cut(s) 1257
MspA1I CMGCKG 2 cut(s) 340, 1437
MspI CCGG 1 cut(s) 788
MunI CAATTG 1 cut(s) 30
MwoI GCNNNNNNNGC 7 cut(s) 502, 516, 1035, 1254, 1592, 1843, 1895
NdeII GATC 9 cut(s) 768, 856, 877, 1188, 1210, 1408, 1635, 1818, 1840
NmuCI GTSAC 2 cut(s) 901, 1216
NspI RCATGY 4 cut(s) 576, 1456, 1651, 1889
NspV TTCGAA 1 cut(s) 864
PagI TCATGA 1 cut(s) 1657
PceI AGGCCT 1 cut(s) 746
PciI ACATGT 1 cut(s) 572
PciSI GCTCTTC 1 cut(s) 124
PcsI WCGNNNNNNNCGW 1 cut(s) 861
PdmI GAANNNNTTC 1 cut(s) 1608
PfeI GAWTC 5 cut(s) 238, 412, 487, 963, 1095
PflMI CCANNNNNTGG 1 cut(s) 553
PkrI GCNGC 2 cut(s) 339, 1891
PleI GAGTC 1 cut(s) 1393
PpsI GAGTC 1 cut(s) 1393
PscI ACATGT 1 cut(s) 572
PshBI ATTAAT 3 cut(s) 393, 603, 812
PsiI TTATAA 2 cut(s) 186, 804
PspFI CCCAGC 3 cut(s) 49, 620, 1510
PspPI GGNCC 3 cut(s) 544, 955, 1365
PstI CTGCAG 1 cut(s) 1900
PsuI RGATCY 2 cut(s) 1408, 1635
PvuII CAGCTG 2 cut(s) 340, 1437
RsaI GTAC 5 cut(s) 291, 349, 376, 786, 1065
RsaNI GTAC 5 cut(s) 290, 348, 375, 785, 1064
RseI CAYNNNNRTG 2 cut(s) 1197, 1468
SapI GCTCTTC 1 cut(s) 124
SatI GCNGC 2 cut(s) 338, 1890
Sau3AI GATC 9 cut(s) 768, 856, 877, 1188, 1210, 1408, 1635, 1818, 1840
Sau96I GGNCC 3 cut(s) 544, 955, 1365
ScaI AGTACT 1 cut(s) 349
SchI GAGTC 1 cut(s) 1393
SduI GDGCHC 1 cut(s) 49
SfaNI GCATC 7 cut(s) 781, 1123, 1333, 1524, 1543, 1824, 1901
SfcI CTRYAG 1 cut(s) 1896
SfuI TTCGAA 1 cut(s) 864
SinI GGWCC 2 cut(s) 544, 1365
SmiMI CAYNNNNRTG 2 cut(s) 1197, 1468
SmlI CTYRAG 1 cut(s) 650
SmoI CTYRAG 1 cut(s) 650
SseBI AGGCCT 1 cut(s) 746
SspI AATATT 1 cut(s) 1108
StuI AGGCCT 1 cut(s) 746
StyI CCWWGG 2 cut(s) 1368, 1755
TaaI ACNGT 3 cut(s) 319, 1068, 1384
TaqI TCGA 2 cut(s) 855, 864
TatI WGTACW 3 cut(s) 347, 374, 1063
TfiI GAWTC 5 cut(s) 238, 412, 487, 963, 1095
TscAI CASTG 4 cut(s) 116, 322, 540, 1387
TseFI GTSAC 2 cut(s) 901, 1216
TseI GCWGC 2 cut(s) 337, 1889
Tsp45I GTSAC 2 cut(s) 901, 1216
TspGWI ACGGA 1 cut(s) 939
TspRI CASTG 4 cut(s) 116, 322, 540, 1387
Van91I CCANNNNNTGG 1 cut(s) 553
VpaK11BI GGWCC 2 cut(s) 544, 1365
VspI ATTAAT 3 cut(s) 393, 603, 812
XagI CCTNNNNNAGG 1 cut(s) 262
XapI RAATTY 2 cut(s) 685, 990
XceI RCATGY 4 cut(s) 576, 1456, 1651, 1889
XcmI CCANNNNNNNNNTGG 1 cut(s) 89
XmiI GTMKAC 2 cut(s) 174, 1007
XmnI GAANNNNTTC 1 cut(s) 1608
ZrmI AGTACT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.