RchiOBHm_Chr1g0332041

DnaJ protein homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000572
Physical Location & Seq
Forward (+)
23203261 .. 23206463
3203 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1239 bp
ATGTTTGGGAGAGCTCCGAAGAAAAGCGACAACACCAAGTACTATGAGATCCTTGGAGTGCCTAAGAACGCGTCGCAGGATGATCTGAAGAAGGCTTACAGAAAAGCAGCCATCAAGAACCATCCTGATAAGGGTGGGGATCCAGAGAAGTTTAAAGAGTTGGCCCAAGCATACGAGGTTCTGAGTGATCCAGAGAAACGGGAAGTGTATGACCAATATGGCGAGGATGCACTCAAGGAAGGAATGGGTGCCGGAGGCGGCGGCCACGACCCATTTGATATATTCCAGTCCTTCTTTGGCGGGGGTGGCAGCAGCAGAGGCCGCAGGCAGAGAAGGGGAGAGGATGTGATCCATCCCCTTAAAGTTTCCCTGGAAGATCTATATAATGGGACATCCAAGAAGCTGTCTCTCTCTCGTAACAAAATCTGTGCCAAGTGCAAGGGTAAAGGGTCAAAGTCGGGTGCTTCAATGAAGTGTCCTGGTTGCCAAGGGTCTGGAATGAAAGTCTCTATTAGACATCTTGGACCTTCCATGATCCAGCAAATGCAGCACCCATGCAATGAGTGCAAGGGTACCGGTGAAACCATTAATGACAAGGATCGCTGCCCGCAGTGTAAGGGTGAGAAAGTTGTTCAGGAAAAGAAAGTATTGGAGGTTCATGTGGAGAAGGGCATGCAAAATGGACAGAGAATCACATTCCCTGGTGAAGCTGATGAAGCGCCTGACACCATCACAGGGGATATTGTTTTTGTCCTGCAACAAAAGGAACACCCTAAGTTTAAGCGAAAGGGTGATGACCTATTCTACGAACATACGCTGTCCCTTATGGAGGCACTCTGTGGCTTCCAATTTATCTTCACGCATTTAGATGGCAGGCAACTCCTCATCAAATCTCATCCTGGAGAAGTTGTCAAGCCTGATCAATTCAAGGCTATAAATGATGAAGGCATGCCGATGTACCAGAGGCCATTTATGAAGGGTAAACTATATATACATTTCACTGTGGAGTTCCCAGATTCATTGAAGCCAGAACAGTGCAAGGCCTTGGAAGCAGTGCTGCCGAGGAGTTCTGCCCAGCTTACTGACATGGAACTAGATGAGTGTGAGGAGACTACACTGCATGATGTCAACATAGAAGAGGAAATGCGTCGCAAACAAGCACAGCAGTCTCAAGAGGCATACGACGAGGATGAGGATATGCATGGTGGTGCCCAGAGGGTCCAATGCGCTCAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
DnaJ DnaJ_C DnaJ_CXXCXGXG

Protein Analysis

412

Amino Acids

46.23

Weight (kDa)

6.38

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 13 - 71 1.4e-23 DnaJ domain
DnaJ_C PF01556 118 - 338 1.1e-37 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 143 - 209 1.3e-15 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000572)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44110 AT3G44110 AT5G22060
fragaria_vesca FvH4_3g26170 FvH4_3g26170 FvH4_3g26170 FvH4_3g26220 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270 FvH4_7g05270
malus_domestica MD02G1258400.v1.1 MD03G1159100.v1.1 MD07G1062300.v1.1 MD11G1174700.v1.1
prunus_persica Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.2G072900_v2.0.a1 Prupe.6G146900_v2.0.a1 Prupe.6G146900_v2.0.a1
pyrus_communis pycom02g21960 pycom03g11140 pycom07g04780 pycom11g14940
rosa_chinensis RchiOBHm_Chr1g0332041 RchiOBHm_Chr1g0364381 RchiOBHm_Chr4g0428981 RchiOBHm_Chr5g0049001 RchiOBHm_Chr5g0049021
rosa_laevigata RLG00000007108 RLG00000013380 RLG00000027486 RLG00000029697 RLG00000034581 RLG00000034584
rosa_multiflora Rmu_co8449175.1_g000001 Rmu_sc0000441.1_g000032 Rmu_sc0000530.1_g000003 Rmu_sc0003358.1_g000010 Rmu_sc0004058.1_g000007 Rmu_sc0004522.1_g000007 Rmu_sc0008629.1_g000009 Rmu_sc0009489.1_g000007 Rmu_sc0014815.1_g000013
rosa_roxburghii Rroxscaffold_1G00032850 Rroxscaffold_1G00032870 Rroxscaffold_4G00292340 Rroxscaffold_4G00318430 Rroxscaffold_5G00370640
rosa_rugosa Rorug01G0097800 Rorug01G0097900 Rorug01G0098000 Rorug01G0315800 Rorug04G0231300 Rorug05G0241800 Rorug05G0241900 Rorug05G0242000 Rorug05G0242100.1 Rorug05G0242200 Rorug05G0242300 Rorug06G0102700 Rorug06G0102800
rosa_samantha Rh1AG121800 Rh1BG093200 Rh1CG303100 Rh1DG127500 Rh4BG293700 Rh4DG290600 Rh5AG322000 Rh5CG357500 Rh5CG357600 Rh5DG344100 Rh6BG218000
rosa_wichuraiana Rw0G008830 Rw1G009930 Rw1G028700 Rw5G030390 Rw5G030400 Rw6G018630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 572
AccB1I GGYRCC 3 cut(s) 248, 572, 1208
AccII CGCG 1 cut(s) 71
AciI CCGC 5 cut(s) 258, 261, 300, 322, 608
AclWI GGATC 7 cut(s) 43, 134, 147, 182, 343, 529, 606
AcoI YGGCCR 1 cut(s) 262
AcuI CTGAAG 1 cut(s) 107
AdeI CACNNNGTG 1 cut(s) 839
AfaI GTAC 3 cut(s) 41, 574, 959
AfiI CCNNNNNNNGG 3 cut(s) 131, 735, 829
AflIII ACRYGT 1 cut(s) 69
AgeI ACCGGT 1 cut(s) 575
AgsI TTSAA 3 cut(s) 468, 928, 1024
AjnI CCWGG 4 cut(s) 369, 478, 700, 898
AluBI AGCT 4 cut(s) 14, 403, 710, 1078
AluI AGCT 4 cut(s) 14, 403, 710, 1078
Alw21I GWGCWC 1 cut(s) 16
Alw26I GTCTC 4 cut(s) 411, 511, 1103, 1173
AlwI GGATC 7 cut(s) 43, 134, 147, 182, 343, 529, 606
AoxI GGCC 5 cut(s) 162, 262, 319, 965, 1041
ApeKI GCWGC 6 cut(s) 107, 309, 312, 547, 603, 1057
AseI ATTAAT 1 cut(s) 588
AsiGI ACCGGT 1 cut(s) 575
Asp718I GGTACC 1 cut(s) 572
AspLEI GCGC 2 cut(s) 721, 1229
AspS9I GGNCC 3 cut(s) 163, 524, 1219
AsuHPI GGTGA 4 cut(s) 590, 632, 716, 803
AvaII GGWCC 2 cut(s) 524, 1219
BaeGI GKGCMC 1 cut(s) 1213
BamHI GGATCC 1 cut(s) 139
BanI GGYRCC 3 cut(s) 248, 572, 1208
BanII GRGCYC 1 cut(s) 16
BarI GAAGNNNNNNTAC 2 cut(s) 80, 112
Bbv12I GWGCWC 1 cut(s) 16
BbvI GCAGC 6 cut(s) 119, 321, 324, 559, 590, 1044
BccI CCATC 5 cut(s) 119, 129, 360, 737, 863
BciT130I CCWGG 4 cut(s) 371, 480, 702, 900
BclI TGATCA 1 cut(s) 919
BcoDI GTCTC 4 cut(s) 411, 511, 1103, 1173
BfaI CTAG 1 cut(s) 1094
BfoI RGCGCY 1 cut(s) 722
BglII AGATCT 1 cut(s) 376
BisI GCNGC 9 cut(s) 108, 259, 262, 310, 313, 322, 548, 604, 1058
BlsI GCNGC 9 cut(s) 109, 260, 263, 311, 314, 323, 549, 605, 1059
BmcAI AGTACT 1 cut(s) 41
Bme1390I CCNGG 4 cut(s) 371, 480, 702, 900
Bme18I GGWCC 2 cut(s) 524, 1219
BmgT120I GGNCC 3 cut(s) 163, 524, 1219
BmiI GGNNCC 5 cut(s) 141, 250, 574, 1210, 1220
BmrFI CCNGG 4 cut(s) 371, 480, 702, 900
BmsI GCATC 1 cut(s) 217
BpmI CTGGAG 1 cut(s) 921
BpuEI CTTGAG 2 cut(s) 218, 1155
BsaJI CCNNGG 6 cut(s) 52, 369, 487, 700, 1044, 1061
BsaWI WCCGGW 1 cut(s) 575
BsaXI ACNNNNNCTCC 4 cut(s) 330, 360, 894, 924
Bsc4I CCNNNNNNNGG 3 cut(s) 131, 735, 829
Bse118I RCCGGY 1 cut(s) 575
Bse1I ACTGG 1 cut(s) 286
Bse3DI GCAATG 1 cut(s) 565
BseBI CCWGG 4 cut(s) 371, 480, 702, 900
BseDI CCNNGG 6 cut(s) 52, 369, 487, 700, 1044, 1061
BseGI GGATG 8 cut(s) 85, 121, 232, 349, 352, 392, 895, 1195
BseLI CCNNNNNNNGG 3 cut(s) 131, 735, 829
BseMI GCAATG 1 cut(s) 565
BseMII CTCAG 1 cut(s) 173
BseNI ACTGG 1 cut(s) 286
BseRI GAGGAG 3 cut(s) 872, 1078, 1121
BseSI GKGCMC 1 cut(s) 1213
BseXI GCAGC 6 cut(s) 119, 321, 324, 559, 590, 1044
BseYI CCCAGC 1 cut(s) 1074
Bsh1236I CGCG 1 cut(s) 71
BshFI GGCC 5 cut(s) 164, 264, 321, 967, 1043
BshNI GGYRCC 3 cut(s) 248, 572, 1208
BshTI ACCGGT 1 cut(s) 575
BsiHKAI GWGCWC 1 cut(s) 16
BsiSI CCGG 2 cut(s) 252, 576
BslFI GGGAC 2 cut(s) 403, 805
BslI CCNNNNNNNGG 3 cut(s) 131, 735, 829
BsmAI GTCTC 4 cut(s) 411, 511, 1103, 1173
BsmFI GGGAC 2 cut(s) 403, 805
BsnI GGCC 5 cut(s) 164, 264, 321, 967, 1043
Bsp1286I GDGCHC 2 cut(s) 16, 1213
Bsp143I GATC 9 cut(s) 48, 82, 139, 187, 348, 376, 534, 598, 919
BspACI CCGC 5 cut(s) 258, 261, 300, 322, 608
BspANI GGCC 5 cut(s) 164, 264, 321, 967, 1043
BspCNI CTCAG 1 cut(s) 174
BspFNI CGCG 1 cut(s) 71
BspLI GGNNCC 5 cut(s) 141, 250, 574, 1210, 1220
BspPI GGATC 7 cut(s) 43, 134, 147, 182, 343, 529, 606
BspT107I GGYRCC 3 cut(s) 248, 572, 1208
BsrDI GCAATG 1 cut(s) 565
BsrFI RCCGGY 1 cut(s) 575
BsrI ACTGG 1 cut(s) 286
BssAI RCCGGY 1 cut(s) 575
BssECI CCNNGG 6 cut(s) 52, 369, 487, 700, 1044, 1061
BssMI GATC 9 cut(s) 48, 82, 139, 187, 348, 376, 534, 598, 919
BssT1I CCWWGG 3 cut(s) 52, 487, 1044
Bst2UI CCWGG 4 cut(s) 371, 480, 702, 900
Bst4CI ACNGT 2 cut(s) 1003, 1035
Bst6I CTCTTC 1 cut(s) 1131
BstAPI GCANNNNNTGC 1 cut(s) 564
BstC8I GCNNGC 5 cut(s) 326, 608, 674, 875, 950
BstDEI CTNAG 3 cut(s) 63, 182, 774
BstENI CCTNNNNNAGG 1 cut(s) 827
BstF5I GGATG 8 cut(s) 85, 121, 232, 349, 352, 392, 895, 1195
BstFNI CGCG 1 cut(s) 71
BstH2I RGCGCY 1 cut(s) 722
BstHHI GCGC 2 cut(s) 721, 1229
BstKTI GATC 9 cut(s) 51, 85, 142, 190, 351, 379, 537, 601, 922
BstMAI GTCTC 4 cut(s) 411, 511, 1103, 1173
BstMBI GATC 9 cut(s) 48, 82, 139, 187, 348, 376, 534, 598, 919
BstMWI GCNNNNNNNGC 7 cut(s) 306, 318, 321, 547, 564, 716, 1049
BstNI CCWGG 4 cut(s) 371, 480, 702, 900
BstNSI RCATGY 2 cut(s) 676, 952
BstSCI CCNGG 4 cut(s) 369, 478, 700, 898
BstSLI GKGCMC 1 cut(s) 1213
BstUI CGCG 1 cut(s) 71
BstV1I GCAGC 6 cut(s) 119, 321, 324, 559, 590, 1044
BstX2I RGATCY 3 cut(s) 48, 139, 376
BstXI CCANNNNNNTGG 1 cut(s) 494
BstYI RGATCY 3 cut(s) 48, 139, 376
BsuRI GGCC 5 cut(s) 164, 264, 321, 967, 1043
BtsCI GGATG 8 cut(s) 85, 121, 232, 349, 352, 392, 895, 1195
BtsI GCAGTG 3 cut(s) 617, 1059, 1115
BtsIMutI CAGTG 5 cut(s) 617, 999, 1040, 1059, 1115
Cac8I GCNNGC 5 cut(s) 326, 608, 674, 875, 950
CfoI GCGC 2 cut(s) 721, 1229
Cfr10I RCCGGY 1 cut(s) 575
Cfr13I GGNCC 3 cut(s) 163, 524, 1219
CseI GACGC 2 cut(s) 60, 1136
Csp6I GTAC 3 cut(s) 40, 573, 958
CspAI ACCGGT 1 cut(s) 575
CviAII CATG 8 cut(s) 532, 555, 659, 673, 949, 1087, 1121, 1202
CviQI GTAC 3 cut(s) 40, 573, 958
DdeI CTNAG 3 cut(s) 63, 182, 774
DpnI GATC 9 cut(s) 50, 84, 141, 189, 350, 378, 536, 600, 921
DpnII GATC 9 cut(s) 48, 82, 139, 187, 348, 376, 534, 598, 919
DraI TTTAAA 1 cut(s) 154
DraIII CACNNNGTG 1 cut(s) 839
EaeI YGGCCR 1 cut(s) 262
Eam1104I CTCTTC 1 cut(s) 1131
EarI CTCTTC 1 cut(s) 1131
Ecl136II GAGCTC 1 cut(s) 14
Eco130I CCWWGG 3 cut(s) 52, 487, 1044
Eco147I AGGCCT 1 cut(s) 1043
Eco24I GRGCYC 1 cut(s) 16
Eco47I GGWCC 2 cut(s) 524, 1219
Eco53kI GAGCTC 1 cut(s) 14
Eco57I CTGAAG 1 cut(s) 107
EcoICRI GAGCTC 1 cut(s) 14
EcoNI CCTNNNNNAGG 1 cut(s) 827
EcoRII CCWGG 4 cut(s) 369, 478, 700, 898
EcoT14I CCWWGG 3 cut(s) 52, 487, 1044
EcoT22I ATGCAT 1 cut(s) 1203
EcoT38I GRGCYC 1 cut(s) 16
ErhI CCWWGG 3 cut(s) 52, 487, 1044
FaeI CATG 8 cut(s) 535, 558, 662, 676, 952, 1090, 1124, 1205
FaqI GGGAC 2 cut(s) 403, 805
FatI CATG 8 cut(s) 531, 554, 658, 672, 948, 1086, 1120, 1201
FauI CCCGC 2 cut(s) 293, 615
FbaI TGATCA 1 cut(s) 919
Fnu4HI GCNGC 9 cut(s) 108, 259, 262, 310, 313, 322, 548, 604, 1058
FokI GGATG 8 cut(s) 92, 108, 239, 339, 356, 379, 882, 1202
FriOI GRGCYC 1 cut(s) 16
Fsp4HI GCNGC 9 cut(s) 108, 259, 262, 310, 313, 322, 548, 604, 1058
FspBI CTAG 1 cut(s) 1094
GlaI GCGC 2 cut(s) 720, 1228
GluI GCNGC 9 cut(s) 108, 259, 262, 310, 313, 322, 548, 604, 1058
GsaI CCCAGC 1 cut(s) 1078
GsuI CTGGAG 1 cut(s) 921
HaeII RGCGCY 1 cut(s) 722
HaeIII GGCC 5 cut(s) 164, 264, 321, 967, 1043
HapII CCGG 2 cut(s) 252, 576
HgaI GACGC 2 cut(s) 60, 1136
HhaI GCGC 2 cut(s) 721, 1229
Hin1II CATG 8 cut(s) 535, 558, 662, 676, 952, 1090, 1124, 1205
Hin6I GCGC 2 cut(s) 719, 1227
HinP1I GCGC 2 cut(s) 719, 1227
HincII GTYRAC 1 cut(s) 1129
HindII GTYRAC 1 cut(s) 1129
HinfI GANTC 2 cut(s) 690, 1016
HpaII CCGG 2 cut(s) 252, 576
HphI GGTGA 4 cut(s) 590, 632, 716, 803
Hpy166II GTNNAC 2 cut(s) 983, 1129
Hpy188I TCNGA 3 cut(s) 18, 87, 183
Hpy188III TCNNGA 7 cut(s) 115, 125, 143, 191, 495, 635, 1172
Hpy8I GTNNAC 2 cut(s) 983, 1129
Hpy99I CGWCG 3 cut(s) 76, 1152, 1187
HpyAV CCTTC 8 cut(s) 85, 233, 301, 327, 537, 661, 938, 970
HpyCH4III ACNGT 2 cut(s) 1003, 1035
HpyF10VI GCNNNNNNNGC 7 cut(s) 306, 318, 321, 547, 564, 716, 1049
HpyF3I CTNAG 3 cut(s) 63, 182, 774
Hsp92II CATG 8 cut(s) 535, 558, 662, 676, 952, 1090, 1124, 1205
HspAI GCGC 2 cut(s) 719, 1227
KpnI GGTACC 1 cut(s) 576
Ksp22I TGATCA 1 cut(s) 919
Kzo9I GATC 9 cut(s) 48, 82, 139, 187, 348, 376, 534, 598, 919
LmnI GCTCC 1 cut(s) 19
Lsp1109I GCAGC 6 cut(s) 119, 321, 324, 559, 590, 1044
LweI GCATC 1 cut(s) 217
MaeI CTAG 1 cut(s) 1094
MaeIII GTNAC 1 cut(s) 416
MalI GATC 9 cut(s) 50, 84, 141, 189, 350, 378, 536, 600, 921
MboI GATC 9 cut(s) 48, 82, 139, 187, 348, 376, 534, 598, 919
MboII GAAGA 5 cut(s) 31, 100, 386, 847, 1148
MflI RGATCY 3 cut(s) 48, 139, 376
MhlI GDGCHC 2 cut(s) 16, 1213
MluCI AATT 2 cut(s) 848, 923
MluI ACGCGT 1 cut(s) 69
Mph1103I ATGCAT 1 cut(s) 1203
MseI TTAA 4 cut(s) 153, 360, 588, 780
MslI CAYNNNNRTG 3 cut(s) 867, 953, 1206
MspI CCGG 2 cut(s) 252, 576
MspR9I CCNGG 4 cut(s) 371, 480, 702, 900
MvaI CCWGG 4 cut(s) 371, 480, 702, 900
MvnI CGCG 1 cut(s) 71
MwoI GCNNNNNNNGC 7 cut(s) 306, 318, 321, 547, 564, 716, 1049
NdeII GATC 9 cut(s) 48, 82, 139, 187, 348, 376, 534, 598, 919
NlaIII CATG 8 cut(s) 535, 558, 662, 676, 952, 1090, 1124, 1205
NlaIV GGNNCC 5 cut(s) 141, 250, 574, 1210, 1220
NmeAIII GCCGAG 1 cut(s) 1086
NsiI ATGCAT 1 cut(s) 1203
NspI RCATGY 2 cut(s) 676, 952
PaeI GCATGC 2 cut(s) 676, 952
PceI AGGCCT 1 cut(s) 1043
PfeI GAWTC 2 cut(s) 690, 1016
PfoI TCCNGGA 1 cut(s) 898
PinAI ACCGGT 1 cut(s) 575
PkrI GCNGC 9 cut(s) 109, 260, 263, 311, 314, 323, 549, 605, 1059
PshBI ATTAAT 1 cut(s) 588
Psp124BI GAGCTC 1 cut(s) 16
Psp6I CCWGG 4 cut(s) 369, 478, 700, 898
PspFI CCCAGC 1 cut(s) 1074
PspGI CCWGG 4 cut(s) 369, 478, 700, 898
PspN4I GGNNCC 5 cut(s) 141, 250, 574, 1210, 1220
PspPI GGNCC 3 cut(s) 163, 524, 1219
PsrI GAACNNNNNNTAC 2 cut(s) 639, 671
PsuI RGATCY 3 cut(s) 48, 139, 376
RsaI GTAC 3 cut(s) 41, 574, 959
RsaNI GTAC 3 cut(s) 40, 573, 958
RseI CAYNNNNRTG 3 cut(s) 867, 953, 1206
SacI GAGCTC 1 cut(s) 16
SaqAI TTAA 4 cut(s) 153, 360, 588, 780
SatI GCNGC 9 cut(s) 108, 259, 262, 310, 313, 322, 548, 604, 1058
Sau3AI GATC 9 cut(s) 48, 82, 139, 187, 348, 376, 534, 598, 919
Sau96I GGNCC 3 cut(s) 163, 524, 1219
ScaI AGTACT 1 cut(s) 41
ScrFI CCNGG 4 cut(s) 371, 480, 702, 900
SduI GDGCHC 2 cut(s) 16, 1213
SetI ASST 8 cut(s) 16, 180, 405, 529, 657, 712, 801, 1080
SfaNI GCATC 1 cut(s) 217
SinI GGWCC 2 cut(s) 524, 1219
SmiMI CAYNNNNRTG 3 cut(s) 867, 953, 1206
SmlI CTYRAG 2 cut(s) 233, 1170
SmoI CTYRAG 2 cut(s) 233, 1170
SphI GCATGC 2 cut(s) 676, 952
Sse9I AATT 2 cut(s) 848, 923
SseBI AGGCCT 1 cut(s) 1043
SsiI CCGC 5 cut(s) 258, 261, 300, 322, 608
SspMI CTAG 1 cut(s) 1094
SstI GAGCTC 1 cut(s) 16
StuI AGGCCT 1 cut(s) 1043
StyD4I CCNGG 4 cut(s) 369, 478, 700, 898
StyI CCWWGG 3 cut(s) 52, 487, 1044
TaaI ACNGT 2 cut(s) 1003, 1035
TasI AATT 2 cut(s) 848, 923
TatI WGTACW 1 cut(s) 39
TauI GCSGC 3 cut(s) 261, 264, 324
TfiI GAWTC 2 cut(s) 690, 1016
Tru1I TTAA 4 cut(s) 153, 360, 588, 780
Tru9I TTAA 4 cut(s) 153, 360, 588, 780
TscAI CASTG 5 cut(s) 617, 1006, 1040, 1059, 1122
TseI GCWGC 6 cut(s) 107, 309, 312, 547, 603, 1057
TspDTI ATGAA 7 cut(s) 485, 515, 647, 729, 957, 989, 1008
TspRI CASTG 5 cut(s) 617, 1006, 1040, 1059, 1122
VpaK11BI GGWCC 2 cut(s) 524, 1219
VspI ATTAAT 1 cut(s) 588
XagI CCTNNNNNAGG 1 cut(s) 827
XceI RCATGY 2 cut(s) 676, 952
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XspI CTAG 1 cut(s) 1094
ZrmI AGTACT 1 cut(s) 41
Zsp2I ATGCAT 1 cut(s) 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.