RchiOBHm_Chr1g0378101

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001112
Physical Location & Seq
Forward (+)
64717171 .. 64723117
5947 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60153

Sequence Viewer

Length: 3531 bp
ATGATGAATACAGTACGAGTAGAACTTACAAATTCTATTAGTCCAGATTTGAGTTGGAAGGTTTCAAAGGGTTACAGAAGTGCACCAAGGCGAAGGAAACAGGTTGATAAAGGACCAAAATCGGGTGCGGAGCCAGCAAATAAAAGTACTAAAAGTTCATCTGAAACAACTGTTTCTGAATCAGAGAAGCTTGGTGTGGCTGTACTTGGAAGACGGTTCAGCGACAAAATTGAACATGTGCCGATTAAGAAAAGAAGATTTATGGTCCGTTCTCCGTCACCACCCCCTCGCTTATCTTCTCAGTTACCTGAAAACAATCAACCAGGTGTGGGTGATCTACGTGCTTCAGGTCAGAAGTCATGTTCTAAATCAATTGCCAAAAAGCATACAACAAGGAGTGATACTTCTTCGGTGACTAGTTTTACTCATAGTGCTGTTACTGTTAACGAGAGTTTAACTGAGCCGGCAAATGAAAAGCCTGGTTATGGGGAGGACTTCTCTGGTATTGAGATATTGGCTGCTGCTGCCTGCAACAACAGCATACATGATGATATAGGTGAAGAATTATCACGAGAAGGGACGAATGCATCAACCTCTGCGAGGCCCTTGGCGAAAACTGTTGCATCCTTTTCATCAACGCCAATGATAACTGATTCAGAAATATCAGAAGGAAGAGATGCATCATTGGAAACAATTCATTATTCGCCTAAAGATGTAGTACATGAAGATAAAATAGAGAACTCCTTTGTTGAGGATAGCTTGGTTAAAACTAATATTGGTGACGGAGATGACCAAGCAGTAGCATCTTCAAAGGATGTTAGGTTGCACTGGGATCTAAATGTTTGTATGGATGCTTGGGAGGAGCCTTGTGATACGGTGATGGTTGATCCTCAAGCAAATGCTGTAGACGTCATCTGTATTGACAGACAGAGCGAAAAGCAGCCAGTTTCACAAGATGGTGATGCACAGGGATCCGTAGAAGCTAAGAATCCTGAACTGCTTCCTGTGGTTGATGATGTGGAACAGGGATTGAAAGCATCCCCGGACTCTGAAATAAGTTATGGTAAAAGTGGCCTGGCTGATAATGCTCTAGGATCTTCAAAAGATGCAGGTGTGGTTACAGACAATTGCAATCAGGATGTCAGCATGGATGCATGTGGTGATAATTCCTCCTGTGTTCGCTTTGACAATATTGCACGCACACCTACTGTGCCTGTAGAAAAGAATGGAACACCACCTGCCAGTATTGGTGCACAACTGGGTGACACTAACTGTTCAGGAAAGATCCAGCTCGAAAACCCTGCTATAACTTGTGTGCCTGTTGTGGAAGGGGTTTCTTGTGAGATGGGCAGCACTGTTGTAGATGATGATGGTAAGGGCTCTGCTGCAACATCCAGCTTCCATGATGATCCAAAATCCCCAGAAGAGATGACAGCGGTCGAGAGCTGTCACTTACAGAAGAGTTGTCCAGAGGTCAAGCCTGTATGCAAAACAGAAGATGTGATTAAGCCTGCATCAGGTGCATCTGTTGGTGAAGGCCTCTCTTTGGTGACTTTAATTGTAAAGGATCAGGTTGAAGCTGCATCTCAGATTCATACTGTTAATTCTCTACAAAATGCTGGGTCTCTAGAAGTAATGCCTAAATCTTCTGTGAGTGCCACAAAGGATCCTCCAGCTGATGCTGGTCCCTCCCGTAACGAGCAATGCCACTATGGTGATGGTACTGCAGGAAGTAAAGTCACTACAGTAGATTCTTCTGGTGTCAACAGTCACTTGGATGATAAGGATCACATGGTTGCCAACAACAACCCTACGGAACAGGAGGTCGGATATGATTCTCAATATGAGGACGGGGAGTTGAGGGAATCAGATGTACCTTATTGGGAGGAGAATGAATTTGACGAAGTTGAACGTGTTGATTATGGTTCTGATACATGTGACACTGATGCTGCTGATGGCTCTGTATCAGGAAAAGTGGAATGCAGTGAATTTTGCGGGGTAGAATCTAGGAACATTAACATGAACGTACAGGTTGTGCGAGGATTGAGCCTAGGTTCTGATAATATGTGTGGAAAAGTTGAACATAGTACCACTGGAAATGCTTTGAGACAATCTTCAGTGGGTTCAAAGACGAGAACTTCTGGATCTGAACAATTGCCCGGTGATTCTGAAGCTTCTTCAAACAGAACTGCAGGAGCAACTGAGGGTTGCACAATAAGAAAACATACCGGTGATTGCTTTGATGGCCTTAATGGTAAAGATCCTGCCAAAGTGGATGGATCAATGACATCTGATACCTTGAATAGGATGGGAACTTCATCTGGGAGGAGGTATGACTCTTTTGATTTCTCCACTCACTCTGAGGAGGTCGGTTCTGATTATTCCATGGGAAAGGAAAGATCTGATTCACGTATGCTTGGTAAGAGTTTGGGAGGTGTTCGTTTTGCTTCTAGGAGTTATTGGGATTCCAAACGTCGTGGATCACCATCTTATCGTGGTTCCTTTGGTTCTAGCCGCCCTAGACCAAGAAGTGGTATCGAGAGTGATGAATATGCAATGGATCCAGATGATACATTTTCAGAAGCGGCAGAGGTTGCAGGAGTTCACAATCGTGTTCGCAGACAAGCTATGAGTTATAATTCAAATCGTTCTTATCAGCCCACATTTAGAAGAAGATCCCCAGATACACATAGGGGGATGATACCTATGAGGGATATAAGTCCTGATAGGAGGAGAAGATATCCACAAGGGGTTGGTAGAGGTATGCGGGATTACCACAGGCCTATTCCCAACGAGCTCAATGACAGTTCTTATGATGGGCCACGTCGTATGACCAGGAGAGAACCAAGCGCATCTCCCCCCGGCAGGGGACCTTATTATGGTAGACCCAAGTTCCAGTCTAGAGGCAGAAGTCGATCTCCTCTTGCATGGGAACGGAATGAGGTTTCAAGACATCGTGGTAGCAGGTCCCCTGATTATAGATTTGATGGTAAAATGGAGAGGGGGAGAGTGCCCTTTCAGAAGAACAGTTTTGGAGCAAAGTATGAAGCAGGGTTCTTTTCCCCACCAAAACGTCGGTTTTCCCCACAACACAATTCAAGATGGTTTGATGATCGCAATGGTGCTGGAGATCATAATTTCAGAGGCAGGAGAGGAGGTGGAAGGAGATTCCAACCGAGCCAAAGGTTTGATTCAGTGCGTTCTCGGAGAGTGGATTCAGATGATTATTTTGAACCCATTGTTCGTCCAAGATTCTCTGAGTTGAACAGTGGTGGTAGGGAATGTAGATTTGAGGGCAGTGATGAAGATAGAAGGAAGCCTGAAGGAAGATTTCAAATTGTTCATCGTGTGCGGCGTTATGATTCTGAAGGTGTTGTGCGTCAGTTCCGTTACGATGAAGAAGATCGGTTTGCATCCCGCAATACACAGAACTTTGATGACTGCGATAATAGGGGCGCTGATCGACGGCCTCGAGATGTTTACCTAGGAGAGCAGCAGCAGATAGAGAACAGAAGGGTAACTAAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1176

Amino Acids

129.26

Weight (kDa)

5.76

Isoelectric Point (pI)

61.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2637
AarI CACCTGC 2 cut(s) 1100, 1246
AatII GACGTC 1 cut(s) 912
Acc36I ACCTGC 3 cut(s) 1100, 1246, 2955
AccB7I CCANNNNNTGG 1 cut(s) 2531
AccI GTMKAC 2 cut(s) 906, 2884
AciI CCGC 8 cut(s) 128, 1436, 1995, 2515, 2585, 2767, 3352, 3418
AcsI RAATTY 3 cut(s) 31, 1895, 1988
AcuI CTGAAG 5 cut(s) 330, 2100, 2190, 3342, 3387
AcyI GRCGYC 1 cut(s) 909
AfaI GTAC 8 cut(s) 15, 148, 204, 720, 1723, 1875, 2028, 2089
AflIII ACRYGT 3 cut(s) 235, 1912, 1934
AgeI ACCGGT 1 cut(s) 2228
AhlI ACTAGT 1 cut(s) 416
AjiI CACGTC 1 cut(s) 2825
AjnI CCWGG 4 cut(s) 322, 478, 1074, 2834
AleI CACNNNNGTG 2 cut(s) 1713, 2610
Alw21I GWGCWC 3 cut(s) 85, 1255, 2799
Alw26I GTCTC 2 cut(s) 1629, 2101
Alw44I GTGCAC 2 cut(s) 81, 1251
Ama87I CYCGRG 1 cut(s) 3471
AoxI GGCC 7 cut(s) 602, 1072, 1537, 2245, 2780, 2819, 3467
ApaLI GTGCAC 2 cut(s) 81, 1251
ApoI RAATTY 3 cut(s) 31, 1895, 1988
AsiGI ACCGGT 1 cut(s) 2228
Asp700I GAANNNNTTC 2 cut(s) 693, 999
AspA2I CCTAGG 2 cut(s) 2050, 3484
AspLEI GCGC 2 cut(s) 2852, 3458
AspS9I GGNCC 7 cut(s) 113, 265, 603, 1685, 2819, 2870, 2967
AsuC2I CCSGG 3 cut(s) 1043, 2160, 2862
AvaI CYCGRG 1 cut(s) 3471
AvaII GGWCC 5 cut(s) 113, 265, 1685, 2870, 2967
AvrII CCTAGG 2 cut(s) 2050, 3484
BaeGI GKGCMC 3 cut(s) 85, 1255, 3015
BamHI GGATCC 3 cut(s) 971, 1666, 2560
BanII GRGCYC 2 cut(s) 1382, 2799
BauI CACGAG 1 cut(s) 570
BbsI GAAGAC 1 cut(s) 217
Bbv12I GWGCWC 3 cut(s) 85, 1255, 2799
BceAI ACGGC 1 cut(s) 3482
BcgI CGANNNNNNTGC 2 cut(s) 1283, 1317
BciT130I CCWGG 4 cut(s) 324, 480, 1076, 2836
BcnI CCSGG 3 cut(s) 1043, 2160, 2862
BcoDI GTCTC 2 cut(s) 1629, 2101
BcuI ACTAGT 1 cut(s) 416
BfmI CTRYAG 5 cut(s) 903, 1215, 1725, 1743, 2190
BfoI RGCGCY 1 cut(s) 3459
BfuAI ACCTGC 3 cut(s) 1100, 1246, 2955
BglII AGATCT 1 cut(s) 2399
BlnI CCTAGG 2 cut(s) 2050, 3484
BmcAI AGTACT 1 cut(s) 148
Bme1390I CCNGG 7 cut(s) 324, 480, 1043, 1076, 2160, 2836, 2862
Bme18I GGWCC 5 cut(s) 113, 265, 1685, 2870, 2967
BmeT110I CYCGRG 1 cut(s) 3471
BmgBI CACGTC 1 cut(s) 2825
BmgT120I GGNCC 7 cut(s) 113, 265, 603, 1685, 2819, 2870, 2967
BmiI GGNNCC 9 cut(s) 132, 864, 973, 1668, 1687, 2500, 2562, 2871, 2969
BmrFI CCNGG 7 cut(s) 324, 480, 1043, 1076, 2160, 2836, 2862
BmrI ACTGGG 2 cut(s) 838, 1268
BmuI ACTGGG 2 cut(s) 838, 1268
BoxI GACNNNNGTC 1 cut(s) 1436
BpiI GAAGAC 1 cut(s) 217
BplI GAGNNNNNCTC 2 cut(s) 482, 514
BpmI CTGGAG 2 cut(s) 1656, 3147
BpuEI CTTGAG 1 cut(s) 876
BpuMI CCSGG 3 cut(s) 1043, 2160, 2862
BsaAI YACGTR 2 cut(s) 341, 2411
BsaBI GATNNNNATC 2 cut(s) 1785, 2485
BsaHI GRCGYC 1 cut(s) 909
BsaI GGTCTC 1 cut(s) 1629
BsaJI CCNNGG 7 cut(s) 86, 606, 1041, 2050, 2385, 2860, 3484
BsaWI WCCGGW 1 cut(s) 2228
BsaXI ACNNNNNCTCC 2 cut(s) 3142, 3172
Bse118I RCCGGY 2 cut(s) 463, 2228
Bse1I ACTGG 6 cut(s) 833, 944, 1242, 1263, 2098, 2896
Bse3DI GCAATG 3 cut(s) 1709, 2562, 3124
Bse8I GATNNNNATC 2 cut(s) 1785, 2485
BseBI CCWGG 4 cut(s) 324, 480, 1076, 2836
BseDI CCNNGG 7 cut(s) 86, 606, 1041, 2050, 2385, 2860, 3484
BseJI GATNNNNATC 2 cut(s) 1785, 2485
BseMI GCAATG 3 cut(s) 1709, 2562, 3124
BseMII CTCAG 6 cut(s) 314, 450, 1601, 2193, 2352, 3249
BseNI ACTGG 6 cut(s) 833, 944, 1242, 1263, 2098, 2896
BseRI GAGGAG 7 cut(s) 875, 1901, 2341, 2378, 2746, 2910, 3168
BseSI GKGCMC 3 cut(s) 85, 1255, 3015
BseYI CCCAGC 1 cut(s) 1619
Bsh1285I CGRYCG 1 cut(s) 1440
BshFI GGCC 7 cut(s) 604, 1074, 1539, 2247, 2782, 2821, 3469
BshTI ACCGGT 1 cut(s) 2228
BsiEI CGRYCG 1 cut(s) 1440
BsiHKAI GWGCWC 3 cut(s) 85, 1255, 2799
BsiHKCI CYCGRG 1 cut(s) 3471
BsiSI CCGG 5 cut(s) 464, 1043, 2160, 2229, 2862
BslFI GGGAC 4 cut(s) 592, 1671, 2883, 2953
BsmAI GTCTC 2 cut(s) 1629, 2101
BsmFI GGGAC 4 cut(s) 592, 1671, 2883, 2953
BsmI GAATGC 2 cut(s) 589, 1985
BsnI GGCC 7 cut(s) 604, 1074, 1539, 2247, 2782, 2821, 3469
Bso31I GGTCTC 1 cut(s) 1629
BsoBI CYCGRG 1 cut(s) 3471
Bsp1286I GDGCHC 5 cut(s) 85, 1255, 1382, 2799, 3015
Bsp19I CCATGG 1 cut(s) 2385
BspACI CCGC 8 cut(s) 128, 1436, 1995, 2515, 2585, 2767, 3352, 3418
BspANI GGCC 7 cut(s) 604, 1074, 1539, 2247, 2782, 2821, 3469
BspCNI CTCAG 6 cut(s) 313, 451, 1600, 2194, 2353, 3250
BspLI GGNNCC 9 cut(s) 132, 864, 973, 1668, 1687, 2500, 2562, 2871, 2969
BspMAI CTGCAG 2 cut(s) 1729, 2194
BspMI ACCTGC 3 cut(s) 1100, 1246, 2955
BspTNI GGTCTC 1 cut(s) 1629
BsrDI GCAATG 3 cut(s) 1709, 2562, 3124
BsrFI RCCGGY 2 cut(s) 463, 2228
BsrI ACTGG 6 cut(s) 833, 944, 1242, 1263, 2098, 2896
BssAI RCCGGY 2 cut(s) 463, 2228
BssECI CCNNGG 7 cut(s) 86, 606, 1041, 2050, 2385, 2860, 3484
BssNI GRCGYC 1 cut(s) 909
BssSI CACGAG 1 cut(s) 570
BssT1I CCWWGG 5 cut(s) 86, 606, 2050, 2385, 3484
Bst2BI CACGAG 1 cut(s) 570
Bst2UI CCWGG 4 cut(s) 324, 480, 1076, 2836
Bst6I CTCTTC 3 cut(s) 667, 1419, 1454
BstACI GRCGYC 1 cut(s) 909
BstAPI GCANNNNNTGC 2 cut(s) 1520, 2594
BstBAI YACGTR 2 cut(s) 341, 2411
BstC8I GCNNGC 5 cut(s) 135, 465, 529, 1198, 1512
BstDEI CTNAG 8 cut(s) 300, 459, 984, 1587, 2202, 2361, 3258, 3522
BstDSI CCRYGG 1 cut(s) 2385
BstENI CCTNNNNNAGG 3 cut(s) 598, 1515, 2302
BstH2I RGCGCY 1 cut(s) 3459
BstHHI GCGC 2 cut(s) 2852, 3458
BstMAI GTCTC 2 cut(s) 1629, 2101
BstMCI CGRYCG 1 cut(s) 1440
BstMWI GCNNNNNNNGC 7 cut(s) 134, 524, 537, 1085, 1520, 2244, 2594
BstNI CCWGG 4 cut(s) 324, 480, 1076, 2836
BstNSI RCATGY 3 cut(s) 239, 1158, 1938
BstPAI GACNNNNGTC 1 cut(s) 1436
BstSCI CCNGG 7 cut(s) 322, 478, 1041, 1074, 2158, 2834, 2860
BstSFI CTRYAG 5 cut(s) 903, 1215, 1725, 1743, 2190
BstSLI GKGCMC 3 cut(s) 85, 1255, 3015
BstV2I GAAGAC 1 cut(s) 217
BsuRI GGCC 7 cut(s) 604, 1074, 1539, 2247, 2782, 2821, 3469
BtgI CCRYGG 1 cut(s) 2385
BtrI CACGTC 1 cut(s) 2825
BtsI GCAGTG 2 cut(s) 1990, 3304
BtsIMutI CAGTG 9 cut(s) 826, 1353, 1941, 1990, 2091, 2124, 3201, 3274, 3304
BveI ACCTGC 3 cut(s) 1100, 1246, 2955
Cac8I GCNNGC 5 cut(s) 135, 465, 529, 1198, 1512
CfoI GCGC 2 cut(s) 2852, 3458
Cfr10I RCCGGY 2 cut(s) 463, 2228
Cfr13I GGNCC 7 cut(s) 113, 265, 603, 1685, 2819, 2870, 2967
CseI GACGC 1 cut(s) 3368
CsiI ACCWGGT 1 cut(s) 322
Csp6I GTAC 8 cut(s) 14, 147, 203, 719, 1722, 1874, 2027, 2088
CspAI ACCGGT 1 cut(s) 2228
CspCI CAANNNNNGTGG 2 cut(s) 2458, 2493
CviQI GTAC 8 cut(s) 14, 147, 203, 719, 1722, 1874, 2027, 2088
DdeI CTNAG 8 cut(s) 300, 459, 984, 1587, 2202, 2361, 3258, 3522
Eam1104I CTCTTC 3 cut(s) 667, 1419, 1454
EarI CTCTTC 3 cut(s) 667, 1419, 1454
Ecl136II GAGCTC 1 cut(s) 2797
Eco130I CCWWGG 5 cut(s) 86, 606, 2050, 2385, 3484
Eco147I AGGCCT 2 cut(s) 1539, 2782
Eco24I GRGCYC 2 cut(s) 1382, 2799
Eco31I GGTCTC 1 cut(s) 1629
Eco32I GATATC 1 cut(s) 2741
Eco47I GGWCC 5 cut(s) 113, 265, 1685, 2870, 2967
Eco53kI GAGCTC 1 cut(s) 2797
Eco57I CTGAAG 5 cut(s) 330, 2100, 2190, 3342, 3387
Eco88I CYCGRG 1 cut(s) 3471
EcoICRI GAGCTC 1 cut(s) 2797
EcoNI CCTNNNNNAGG 3 cut(s) 598, 1515, 2302
EcoO109I RGGNCCY 3 cut(s) 603, 2870, 2967
EcoRII CCWGG 4 cut(s) 322, 478, 1074, 2834
EcoRV GATATC 1 cut(s) 2741
EcoT14I CCWWGG 5 cut(s) 86, 606, 2050, 2385, 3484
EcoT22I ATGCAT 3 cut(s) 589, 682, 1156
EcoT38I GRGCYC 2 cut(s) 1382, 2799
ErhI CCWWGG 5 cut(s) 86, 606, 2050, 2385, 3484
FaqI GGGAC 4 cut(s) 592, 1671, 2883, 2953
FauI CCCGC 3 cut(s) 1988, 2760, 3425
FblI GTMKAC 2 cut(s) 906, 2884
FriOI GRGCYC 2 cut(s) 1382, 2799
GlaI GCGC 2 cut(s) 2851, 3457
GsaI CCCAGC 1 cut(s) 1623
GsuI CTGGAG 2 cut(s) 1656, 3147
HaeII RGCGCY 1 cut(s) 3459
HaeIII GGCC 7 cut(s) 604, 1074, 1539, 2247, 2782, 2821, 3469
HapII CCGG 5 cut(s) 464, 1043, 2160, 2229, 2862
HgaI GACGC 1 cut(s) 3368
HhaI GCGC 2 cut(s) 2852, 3458
Hin1I GRCGYC 1 cut(s) 909
Hin6I GCGC 2 cut(s) 2850, 3456
HinP1I GCGC 2 cut(s) 2850, 3456
HincII GTYRAC 2 cut(s) 445, 1765
HindII GTYRAC 2 cut(s) 445, 1765
HindIII AAGCTT 2 cut(s) 188, 2172
HpaI GTTAAC 1 cut(s) 445
HpaII CCGG 5 cut(s) 464, 1043, 2160, 2229, 2862
Hpy166II GTNNAC 8 cut(s) 83, 445, 907, 1253, 1765, 2605, 2885, 3481
Hpy8I GTNNAC 8 cut(s) 83, 445, 907, 1253, 1765, 2605, 2885, 3481
Hpy99I CGWCG 4 cut(s) 2478, 2829, 3078, 3468
HpyCH4IV ACGT 8 cut(s) 340, 909, 1912, 2025, 2410, 2473, 2824, 3073
HpyF10VI GCNNNNNNNGC 7 cut(s) 134, 524, 537, 1085, 1520, 2244, 2594
HpyF3I CTNAG 8 cut(s) 300, 459, 984, 1587, 2202, 2361, 3258, 3522
HpySE526I ACGT 8 cut(s) 340, 909, 1912, 2025, 2410, 2473, 2824, 3073
Hsp92I GRCGYC 1 cut(s) 909
HspAI GCGC 2 cut(s) 2850, 3456
KroI GCCGGC 1 cut(s) 463
KroNI GCCGGC 1 cut(s) 465
KspAI GTTAAC 1 cut(s) 445
LmnI GCTCC 4 cut(s) 130, 862, 2195, 3035
MabI ACCWGGT 1 cut(s) 322
MaeII ACGT 8 cut(s) 340, 909, 1912, 2025, 2410, 2473, 2824, 3073
MfeI CAATTG 3 cut(s) 372, 1126, 2153
MhlI GDGCHC 5 cut(s) 85, 1255, 1382, 2799, 3015
MlyI GAGTC 2 cut(s) 1040, 2330
MmeI TCCRAC 3 cut(s) 35, 1807, 3196
Mph1103I ATGCAT 3 cut(s) 589, 682, 1156
MroNI GCCGGC 1 cut(s) 463
MroXI GAANNNNTTC 2 cut(s) 693, 999
MseI TTAA 9 cut(s) 246, 444, 455, 765, 1506, 1556, 1602, 2016, 2250
MslI CAYNNNNRTG 5 cut(s) 1713, 1776, 2018, 2229, 2610
MspA1I CMGCKG 2 cut(s) 1436, 1676
MspI CCGG 5 cut(s) 464, 1043, 2160, 2229, 2862
MspR9I CCNGG 7 cut(s) 324, 480, 1043, 1076, 2160, 2836, 2862
MunI CAATTG 3 cut(s) 372, 1126, 2153
Mva1269I GAATGC 2 cut(s) 589, 1985
MvaI CCWGG 4 cut(s) 324, 480, 1076, 2836
MwoI GCNNNNNNNGC 7 cut(s) 134, 524, 537, 1085, 1520, 2244, 2594
NaeI GCCGGC 1 cut(s) 465
NciI CCSGG 3 cut(s) 1043, 2160, 2862
NcoI CCATGG 1 cut(s) 2385
NgoMIV GCCGGC 1 cut(s) 463
NlaIV GGNNCC 9 cut(s) 132, 864, 973, 1668, 1687, 2500, 2562, 2871, 2969
NmuCI GTSAC 9 cut(s) 276, 412, 779, 1262, 1448, 1549, 1738, 1769, 1937
NsiI ATGCAT 3 cut(s) 589, 682, 1156
NspI RCATGY 3 cut(s) 239, 1158, 1938
OliI CACNNNNGTG 2 cut(s) 1713, 2610
PaeR7I CTCGAG 1 cut(s) 3471
PaqCI CACCTGC 2 cut(s) 1100, 1246
PceI AGGCCT 2 cut(s) 1539, 2782
PciI ACATGT 2 cut(s) 235, 1934
PcsI WCGNNNNNNNCGW 2 cut(s) 3352, 3469
PctI GAATGC 2 cut(s) 589, 1985
PdiI GCCGGC 1 cut(s) 465
PdmI GAANNNNTTC 2 cut(s) 693, 999
PflMI CCANNNNNTGG 1 cut(s) 2531
PinAI ACCGGT 1 cut(s) 2228
PleI GAGTC 2 cut(s) 1040, 2330
PpsI GAGTC 2 cut(s) 1040, 2330
Ppu21I YACGTR 2 cut(s) 341, 2411
PpuMI RGGWCCY 2 cut(s) 2870, 2967
PscI ACATGT 2 cut(s) 235, 1934
PshAI GACNNNNGTC 1 cut(s) 1436
PsiI TTATAA 1 cut(s) 2637
Psp124BI GAGCTC 1 cut(s) 2799
Psp5II RGGWCCY 2 cut(s) 2870, 2967
Psp6I CCWGG 4 cut(s) 322, 478, 1074, 2834
PspFI CCCAGC 1 cut(s) 1619
PspGI CCWGG 4 cut(s) 322, 478, 1074, 2834
PspN4I GGNNCC 9 cut(s) 132, 864, 973, 1668, 1687, 2500, 2562, 2871, 2969
PspPI GGNCC 7 cut(s) 113, 265, 603, 1685, 2819, 2870, 2967
PspPPI RGGWCCY 2 cut(s) 2870, 2967
PsrI GAACNNNNNNTAC 2 cut(s) 139, 171
PstI CTGCAG 2 cut(s) 1729, 2194
PvuII CAGCTG 1 cut(s) 1676
RsaI GTAC 8 cut(s) 15, 148, 204, 720, 1723, 1875, 2028, 2089
RsaNI GTAC 8 cut(s) 14, 147, 203, 719, 1722, 1874, 2027, 2088
RseI CAYNNNNRTG 5 cut(s) 1713, 1776, 2018, 2229, 2610
SacI GAGCTC 1 cut(s) 2799
SaqAI TTAA 9 cut(s) 246, 444, 455, 765, 1506, 1556, 1602, 2016, 2250
Sau96I GGNCC 7 cut(s) 113, 265, 603, 1685, 2819, 2870, 2967
ScaI AGTACT 1 cut(s) 148
SchI GAGTC 2 cut(s) 1040, 2330
ScrFI CCNGG 7 cut(s) 324, 480, 1043, 1076, 2160, 2836, 2862
SduI GDGCHC 5 cut(s) 85, 1255, 1382, 2799, 3015
SexAI ACCWGGT 1 cut(s) 322
SfcI CTRYAG 5 cut(s) 903, 1215, 1725, 1743, 2190
Sfr274I CTCGAG 1 cut(s) 3471
SinI GGWCC 5 cut(s) 113, 265, 1685, 2870, 2967
SlaI CTCGAG 1 cut(s) 3471
SmiMI CAYNNNNRTG 5 cut(s) 1713, 1776, 2018, 2229, 2610
SmlI CTYRAG 2 cut(s) 891, 3471
SmoI CTYRAG 2 cut(s) 891, 3471
SpeI ACTAGT 1 cut(s) 416
SseBI AGGCCT 2 cut(s) 1539, 2782
SsiI CCGC 8 cut(s) 128, 1436, 1995, 2515, 2585, 2767, 3352, 3418
SspI AATATT 2 cut(s) 775, 1192
SstI GAGCTC 1 cut(s) 2799
StuI AGGCCT 2 cut(s) 1539, 2782
StyD4I CCNGG 7 cut(s) 322, 478, 1041, 1074, 2158, 2834, 2860
StyI CCWWGG 5 cut(s) 86, 606, 2050, 2385, 3484
TaiI ACGT 8 cut(s) 343, 912, 1915, 2028, 2413, 2476, 2827, 3076
TaqI TCGA 6 cut(s) 1293, 1440, 2538, 2914, 3463, 3472
TatI WGTACW 3 cut(s) 146, 202, 718
TauI GCSGC 3 cut(s) 2517, 2588, 3355
Tru1I TTAA 9 cut(s) 246, 444, 455, 765, 1506, 1556, 1602, 2016, 2250
Tru9I TTAA 9 cut(s) 246, 444, 455, 765, 1506, 1556, 1602, 2016, 2250
TscAI CASTG 9 cut(s) 833, 1360, 1948, 1990, 2098, 2124, 3201, 3274, 3304
TseFI GTSAC 9 cut(s) 276, 412, 779, 1262, 1448, 1549, 1738, 1769, 1937
Tsp45I GTSAC 9 cut(s) 276, 412, 779, 1262, 1448, 1549, 1738, 1769, 1937
TspGWI ACGGA 7 cut(s) 257, 264, 798, 964, 1829, 2950, 3377
TspRI CASTG 9 cut(s) 833, 1360, 1948, 1990, 2098, 2124, 3201, 3274, 3304
Van91I CCANNNNNTGG 1 cut(s) 2531
VneI GTGCAC 2 cut(s) 81, 1251
VpaK11BI GGWCC 5 cut(s) 113, 265, 1685, 2870, 2967
XagI CCTNNNNNAGG 3 cut(s) 598, 1515, 2302
XapI RAATTY 3 cut(s) 31, 1895, 1988
XbaI TCTAGA 2 cut(s) 1627, 2900
XceI RCATGY 3 cut(s) 239, 1158, 1938
XcmI CCANNNNNNNNNTGG 2 cut(s) 51, 1715
XhoI CTCGAG 1 cut(s) 3471
XmaJI CCTAGG 2 cut(s) 2050, 3484
XmiI GTMKAC 2 cut(s) 906, 2884
XmnI GAANNNNTTC 2 cut(s) 693, 999
ZraI GACGTC 1 cut(s) 910
ZrmI AGTACT 1 cut(s) 148
Zsp2I ATGCAT 3 cut(s) 589, 682, 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.