Rorug01G0406300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0001112
Physical Location & Seq
Forward (+)
51299389 .. 51303539
4151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0406300.1

Sequence Viewer

Length: 1761 bp
ATGGTGGGAGTAGCGTACGACTGCCTGGCCAACCCTCTCGGCGCCGTCCGATCAACTTTCGAAAAGGCCGTCTCTTCCGGATCCGACCCGATCAACTTCGCCGGCAGCGACTGGGGTGCCGTTGACCTCTTCCGCCGCTTTCTCTTCGACGACGGCGGCCTCTCTCAGGTTCCGATTTTGAATTCTTCAACTATTAGATGGATTCAGCCGAATACTCTGGTTCGGTTTCGGGGGATGGTGCAAGATATGCTGGGAAATGAGCTCTATGTGGGTGCTTACAAGGATGGCTCGGTTTGGAGAACTAACAAGTTTGTGGATGTGGCTCAATACCCTATTGATTCTTGTTCCGAAACTCGGATATGGGAACGCCGTATGCTCTACTGTGTTCCGGTTCCGGGACTGAATTCGTGGACTGAGCCTCCGGCAGTGGTGTATAGAAGTGTGGATTCGACAACCCAACATGGAGAGAAGCGCCAGAGATTGGATGAATCTACAGATAACATGGATTTTGATGTCTCAGATGAGGGATTTCAAGGTTCTCCATCCCCCAAAAAACTGAAAGAGGACGGACATCCTTCCCCGTCTCAGGAGTTGACCGTTGAGGGCACCAGCTCTAGTATGAGAATGCTGCCTGATGTTAACAGGGATTCACTTCCTTGTCTTGTTAAGATATATGATTGTCCAGAGTCTGACATGAAGCTAAATGAGGTTTTTGAGTTTGTTGGAGTGTTCACTTTTGATCCAGAGTTTAAAGTGGAAAATGATGATGATGAGTTTGCAAATGGTTTTAGTGAAGATGTCTTGGTTCAGTTGCCCCCCAATAAGGTGCCACGTCTCCATTGTCTTACTCACAGGAAGCTTGCAGTTCAGGACTTCCTCCCTAGCTCCCCCACAATGGAGGTAAAGCCCAACTTGGTGAAAGATATCAGAAATGCTCTGTTGAGGCATCTTACTGCTGTTCTTGGTAATGATGGTGTAGCTGCTGAATTCCTGCTCTTGCATCTTTTGTCCACGGTGTATTCTAGAGTTGGCACTGTTGCTGTGGGGAAGCTTTCTCTAAATCTCAATTGTTTCAACAAAGAAAGTGTGCCTGTGTTTGGCCCTCGGCTTCTCCTTGCTATCAAGAATCTTTTACCTTTCACACACTGTATATCTCTAACAGTGGATTATCTTAACACTGCTTCTCTTGCACCAAAAAAAGATTATGAGACAAACAGACTGATTACTGGAGCTCTGCAGCTGGCTGAGGGTTCACACTTGATCTTTGATGAGACCCAGTTGGAAGCTGGGACTCTCAACTCTGTTGGGGTTGAAAATGCAAGATTGCTTAAAACTCTAATGGAAATGCAAAAGGTGGAATATGATTTTCAGTACTATAAATTGGACATGGACGCTGATGTCCAATTGCTTGTTCTTTCTGAAGGCAAATCAAACATCTTACCAGCTGACATAGTTTTACCTTTCCAACCCTCTTCAGTGGATTTGTTTGAAGCCACTGCAGAAGCACTAGAGGCTTGGAGATGGTACTTGGCTACTATTAGATCATTGCCCCATTCTATAGAGCCAGAAATACAGAAGGTGATAGAAAATGACTTGGTTGAAGCAAAGCAAGCAGATAGGAGTATAGGCACCCAAGACTTCAGCAGATTGCTGACAATGGGTCGACTGTTGTCTATGAGTTTCGGTGAAACCAGCCTATCATTGGAACATTGGCAGATGGTCAAGGAACTGGAGAGGTTAAGAAGAGAGAGGATCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

586

Amino Acids

65.83

Weight (kDa)

4.97

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCM_bind PF09739 44 - 585 1e-193 Mini-chromosome maintenance replisome factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1397
AccB1I GGYRCC 5 cut(s) 41, 116, 605, 826, 1628
AccB7I CCANNNNNTGG 1 cut(s) 481
AccI GTMKAC 1 cut(s) 1663
AccIII TCCGGA 1 cut(s) 77
AciI CCGC 3 cut(s) 133, 136, 156
AclWI GGATC 4 cut(s) 75, 88, 734, 1760
AcoI YGGCCR 1 cut(s) 27
AcsI RAATTY 3 cut(s) 181, 403, 986
AcuI CTGAAG 3 cut(s) 1440, 1458, 1624
AcyI GRCGYC 1 cut(s) 42
AfaI GTAC 3 cut(s) 17, 1373, 1526
AfiI CCNNNNNNNGG 9 cut(s) 166, 354, 395, 481, 586, 823, 895, 1097, 1702
AgsI TTSAA 7 cut(s) 181, 189, 533, 1075, 1313, 1490, 1601
AhdI GACNNNNNGTC 1 cut(s) 1659
AjiI CACGTC 1 cut(s) 833
AjnI CCWGG 1 cut(s) 24
AjuI GAANNNNNNNTTGG 2 cut(s) 1395, 1427
Alw21I GWGCWC 2 cut(s) 264, 1234
Alw26I GTCTC 6 cut(s) 76, 520, 588, 839, 1202, 1265
AlwI GGATC 4 cut(s) 75, 88, 734, 1760
AlwNI CAGNNNCTG 2 cut(s) 111, 689
Aor13HI TCCGGA 1 cut(s) 77
AoxI GGCC 4 cut(s) 27, 66, 157, 1099
ApeKI GCWGC 4 cut(s) 105, 628, 980, 1237
ApoI RAATTY 3 cut(s) 181, 403, 986
ArsI GACNNNNNNTTYG 2 cut(s) 54, 86
AspLEI GCGC 2 cut(s) 44, 474
AspS9I GGNCC 1 cut(s) 1100
AsuC2I CCSGG 1 cut(s) 396
AsuHPI GGTGA 3 cut(s) 928, 1591, 1697
AsuII TTCGAA 1 cut(s) 60
BaeGI GKGCMC 1 cut(s) 608
BalI TGGCCA 1 cut(s) 29
BamHI GGATCC 1 cut(s) 80
BanI GGYRCC 5 cut(s) 41, 116, 605, 826, 1628
BanII GRGCYC 2 cut(s) 264, 1234
Bbv12I GWGCWC 2 cut(s) 264, 1234
BbvCI CCTCAGC 1 cut(s) 1245
BbvI GCAGC 4 cut(s) 117, 615, 967, 1249
BccI CCATC 7 cut(s) 192, 229, 278, 550, 965, 1515, 1711
BceAI ACGGC 5 cut(s) 29, 53, 104, 169, 354
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 1 cut(s) 26
BcnI CCSGG 1 cut(s) 396
BcoDI GTCTC 6 cut(s) 76, 520, 588, 839, 1202, 1265
BfaI CTAG 4 cut(s) 615, 882, 1023, 1508
BfmI CTRYAG 4 cut(s) 492, 1235, 1497, 1557
BfoI RGCGCY 2 cut(s) 45, 475
BisI GCNGC 6 cut(s) 106, 136, 157, 629, 981, 1238
BlsI GCNGC 6 cut(s) 107, 137, 158, 630, 982, 1239
BmcAI AGTACT 1 cut(s) 1373
Bme1390I CCNGG 2 cut(s) 26, 396
BmeRI GACNNNNNGTC 1 cut(s) 1659
BmgBI CACGTC 1 cut(s) 833
BmgT120I GGNCC 1 cut(s) 1100
BmiI GGNNCC 8 cut(s) 43, 82, 118, 171, 393, 607, 828, 1630
BmrFI CCNGG 2 cut(s) 26, 396
BmrI ACTGGG 2 cut(s) 121, 1270
BmsI GCATC 2 cut(s) 955, 1009
BmuI ACTGGG 2 cut(s) 121, 1270
BoxI GACNNNNGTC 1 cut(s) 1669
BpmI CTGGAG 2 cut(s) 1248, 1751
Bpu10I CCTNAGC 1 cut(s) 1245
Bpu14I TTCGAA 1 cut(s) 60
BpuMI CCSGG 1 cut(s) 396
BsaHI GRCGYC 1 cut(s) 42
BsaI GGTCTC 1 cut(s) 1265
BsaJI CCNNGG 2 cut(s) 1011, 1103
BsaWI WCCGGW 2 cut(s) 77, 388
BsaXI ACNNNNNCTCC 2 cut(s) 403, 433
Bsc4I CCNNNNNNNGG 9 cut(s) 166, 354, 395, 481, 586, 823, 895, 1097, 1702
Bse118I RCCGGY 1 cut(s) 101
Bse1I ACTGG 4 cut(s) 116, 1231, 1276, 1734
Bse3DI GCAATG 1 cut(s) 1544
BseAI TCCGGA 1 cut(s) 77
BseBI CCWGG 1 cut(s) 26
BseDI CCNNGG 2 cut(s) 1011, 1103
BseGI GGATG 6 cut(s) 240, 289, 322, 490, 542, 571
BseLI CCNNNNNNNGG 9 cut(s) 166, 354, 395, 481, 586, 823, 895, 1097, 1702
BseMI GCAATG 1 cut(s) 1544
BseMII CTCAG 5 cut(s) 179, 405, 531, 599, 1236
BseNI ACTGG 4 cut(s) 116, 1231, 1276, 1734
BseSI GKGCMC 1 cut(s) 608
BseXI GCAGC 4 cut(s) 117, 615, 967, 1249
BseYI CCCAGC 2 cut(s) 250, 1286
BshFI GGCC 4 cut(s) 29, 68, 159, 1101
BshNI GGYRCC 5 cut(s) 41, 116, 605, 826, 1628
BsiHKAI GWGCWC 2 cut(s) 264, 1234
BsiSI CCGG 5 cut(s) 78, 102, 389, 395, 422
BsiWI CGTACG 1 cut(s) 15
BslFI GGGAC 2 cut(s) 411, 1303
BslI CCNNNNNNNGG 9 cut(s) 166, 354, 395, 481, 586, 823, 895, 1097, 1702
BsmAI GTCTC 6 cut(s) 76, 520, 588, 839, 1202, 1265
BsmBI CGTCTC 3 cut(s) 76, 588, 839
BsmFI GGGAC 2 cut(s) 411, 1303
BsmI GAATGC 1 cut(s) 630
BsnI GGCC 4 cut(s) 29, 68, 159, 1101
Bso31I GGTCTC 1 cut(s) 1265
Bsp119I TTCGAA 1 cut(s) 60
Bsp1286I GDGCHC 3 cut(s) 264, 608, 1234
Bsp13I TCCGGA 1 cut(s) 77
Bsp143I GATC 7 cut(s) 50, 80, 90, 739, 1260, 1541, 1752
BspACI CCGC 3 cut(s) 133, 136, 156
BspANI GGCC 4 cut(s) 29, 68, 159, 1101
BspCNI CTCAG 5 cut(s) 178, 406, 530, 598, 1237
BspEI TCCGGA 1 cut(s) 77
BspLI GGNNCC 8 cut(s) 43, 82, 118, 171, 393, 607, 828, 1630
BspMAI CTGCAG 2 cut(s) 1239, 1501
BspPI GGATC 4 cut(s) 75, 88, 734, 1760
BspT104I TTCGAA 1 cut(s) 60
BspT107I GGYRCC 5 cut(s) 41, 116, 605, 826, 1628
BspTNI GGTCTC 1 cut(s) 1265
BsrDI GCAATG 1 cut(s) 1544
BsrFI RCCGGY 1 cut(s) 101
BsrI ACTGG 4 cut(s) 116, 1231, 1276, 1734
BssAI RCCGGY 1 cut(s) 101
BssECI CCNNGG 2 cut(s) 1011, 1103
BssMI GATC 7 cut(s) 50, 80, 90, 739, 1260, 1541, 1752
BssNI GRCGYC 1 cut(s) 42
Bst2UI CCWGG 1 cut(s) 26
Bst4CI ACNGT 7 cut(s) 383, 598, 1015, 1036, 1148, 1162, 1668
Bst6I CTCTTC 5 cut(s) 79, 134, 149, 1477, 1738
BstACI GRCGYC 1 cut(s) 42
BstAPI GCANNNNNTGC 1 cut(s) 247
BstBI TTCGAA 1 cut(s) 60
BstC8I GCNNGC 4 cut(s) 103, 861, 1242, 1611
BstDEI CTNAG 5 cut(s) 165, 414, 517, 585, 1245
BstDSI CCRYGG 1 cut(s) 1011
BstENI CCTNNNNNAGG 1 cut(s) 164
BstF5I GGATG 6 cut(s) 240, 289, 322, 490, 542, 571
BstH2I RGCGCY 2 cut(s) 45, 475
BstHHI GCGC 2 cut(s) 44, 474
BstKTI GATC 7 cut(s) 53, 83, 93, 742, 1263, 1544, 1755
BstMAI GTCTC 6 cut(s) 76, 520, 588, 839, 1202, 1265
BstMBI GATC 7 cut(s) 50, 80, 90, 739, 1260, 1541, 1752
BstMWI GCNNNNNNNGC 4 cut(s) 247, 1187, 1511, 1610
BstNI CCWGG 1 cut(s) 26
BstPAI GACNNNNGTC 1 cut(s) 1669
BstSCI CCNGG 2 cut(s) 24, 394
BstSFI CTRYAG 4 cut(s) 492, 1235, 1497, 1557
BstSLI GKGCMC 1 cut(s) 608
BstV1I GCAGC 4 cut(s) 117, 615, 967, 1249
BstX2I RGATCY 1 cut(s) 80
BstYI RGATCY 1 cut(s) 80
BsuRI GGCC 4 cut(s) 29, 68, 159, 1101
BtgI CCRYGG 1 cut(s) 1011
BtrI CACGTC 1 cut(s) 833
BtsCI GGATG 6 cut(s) 240, 289, 322, 490, 542, 571
BtsI GCAGTG 3 cut(s) 432, 1176, 1494
BtsIMutI CAGTG 7 cut(s) 432, 1032, 1144, 1167, 1176, 1482, 1494
Cac8I GCNNGC 4 cut(s) 103, 861, 1242, 1611
CaiI CAGNNNCTG 2 cut(s) 111, 689
CfoI GCGC 2 cut(s) 44, 474
Cfr10I RCCGGY 1 cut(s) 101
Cfr13I GGNCC 1 cut(s) 1100
CseI GACGC 1 cut(s) 1400
Csp6I GTAC 3 cut(s) 16, 1372, 1525
CviAII CATG 4 cut(s) 461, 502, 694, 1387
CviQI GTAC 3 cut(s) 16, 1372, 1525
DdeI CTNAG 5 cut(s) 165, 414, 517, 585, 1245
DinI GGCGCC 1 cut(s) 43
DpnI GATC 7 cut(s) 52, 82, 92, 741, 1262, 1543, 1754
DpnII GATC 7 cut(s) 50, 80, 90, 739, 1260, 1541, 1752
DraI TTTAAA 1 cut(s) 751
DrdI GACNNNNNNGTC 1 cut(s) 1397
DriI GACNNNNNGTC 1 cut(s) 1659
DseDI GACNNNNNNGTC 1 cut(s) 1397
EaeI YGGCCR 1 cut(s) 27
Eam1104I CTCTTC 5 cut(s) 79, 134, 149, 1477, 1738
Eam1105I GACNNNNNGTC 1 cut(s) 1659
EarI CTCTTC 5 cut(s) 79, 134, 149, 1477, 1738
EciI GGCGGA 1 cut(s) 122
Ecl136II GAGCTC 2 cut(s) 262, 1232
Eco24I GRGCYC 2 cut(s) 264, 1234
Eco31I GGTCTC 1 cut(s) 1265
Eco32I GATATC 1 cut(s) 925
Eco53kI GAGCTC 2 cut(s) 262, 1232
Eco57I CTGAAG 3 cut(s) 1440, 1458, 1624
EcoICRI GAGCTC 2 cut(s) 262, 1232
EcoNI CCTNNNNNAGG 1 cut(s) 164
EcoRI GAATTC 3 cut(s) 181, 403, 986
EcoRII CCWGG 1 cut(s) 24
EcoRV GATATC 1 cut(s) 925
EcoT38I GRGCYC 2 cut(s) 264, 1234
EgeI GGCGCC 1 cut(s) 43
EheI GGCGCC 1 cut(s) 43
Esp3I CGTCTC 3 cut(s) 76, 588, 839
FaeI CATG 4 cut(s) 464, 505, 697, 1390
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 2 cut(s) 411, 1303
FatI CATG 4 cut(s) 460, 501, 693, 1386
FblI GTMKAC 1 cut(s) 1663
Fnu4HI GCNGC 6 cut(s) 106, 136, 157, 629, 981, 1238
FokI GGATG 6 cut(s) 247, 296, 329, 497, 529, 558
FriOI GRGCYC 2 cut(s) 264, 1234
Fsp4HI GCNGC 6 cut(s) 106, 136, 157, 629, 981, 1238
FspBI CTAG 4 cut(s) 615, 882, 1023, 1508
GlaI GCGC 2 cut(s) 43, 473
GluI GCNGC 6 cut(s) 106, 136, 157, 629, 981, 1238
GsaI CCCAGC 2 cut(s) 254, 1290
GsuI CTGGAG 2 cut(s) 1248, 1751
HaeII RGCGCY 2 cut(s) 45, 475
HaeIII GGCC 4 cut(s) 29, 68, 159, 1101
HapII CCGG 5 cut(s) 78, 102, 389, 395, 422
HgaI GACGC 1 cut(s) 1400
HhaI GCGC 2 cut(s) 44, 474
Hin1I GRCGYC 1 cut(s) 42
Hin1II CATG 4 cut(s) 464, 505, 697, 1390
Hin6I GCGC 2 cut(s) 42, 472
HinP1I GCGC 2 cut(s) 42, 472
HincII GTYRAC 4 cut(s) 124, 594, 640, 1664
HindII GTYRAC 4 cut(s) 124, 594, 640, 1664
HindIII AAGCTT 2 cut(s) 857, 1049
HinfI GANTC 8 cut(s) 202, 338, 446, 488, 647, 686, 1126, 1291
HpaI GTTAAC 1 cut(s) 640
HpaII CCGG 5 cut(s) 78, 102, 389, 395, 422
HphI GGTGA 3 cut(s) 928, 1591, 1697
Hpy166II GTNNAC 8 cut(s) 124, 411, 594, 640, 732, 1011, 1253, 1664
Hpy188I TCNGA 9 cut(s) 50, 85, 174, 349, 357, 520, 691, 929, 1420
Hpy188III TCNNGA 7 cut(s) 78, 587, 683, 743, 869, 1023, 1123
Hpy8I GTNNAC 8 cut(s) 124, 411, 594, 640, 732, 1011, 1253, 1664
Hpy99I CGWCG 2 cut(s) 152, 155
HpyAV CCTTC 3 cut(s) 585, 1415, 1570
HpyCH4III ACNGT 7 cut(s) 383, 598, 1015, 1036, 1148, 1162, 1668
HpyCH4IV ACGT 1 cut(s) 832
HpyCH4V TGCA 9 cut(s) 241, 779, 863, 1000, 1190, 1237, 1319, 1348, 1499
HpyF10VI GCNNNNNNNGC 4 cut(s) 247, 1187, 1511, 1610
HpyF3I CTNAG 5 cut(s) 165, 414, 517, 585, 1245
HpySE526I ACGT 1 cut(s) 832
Hsp92I GRCGYC 1 cut(s) 42
Hsp92II CATG 4 cut(s) 464, 505, 697, 1390
HspAI GCGC 2 cut(s) 42, 472
KasI GGCGCC 1 cut(s) 41
Kpn2I TCCGGA 1 cut(s) 77
KroI GCCGGC 1 cut(s) 101
KroNI GCCGGC 1 cut(s) 103
KspAI GTTAAC 1 cut(s) 640
Kzo9I GATC 7 cut(s) 50, 80, 90, 739, 1260, 1541, 1752
LmnI GCTCC 2 cut(s) 890, 1229
Lsp1109I GCAGC 4 cut(s) 117, 615, 967, 1249
LweI GCATC 2 cut(s) 955, 1009
MaeI CTAG 4 cut(s) 615, 882, 1023, 1508
MaeII ACGT 1 cut(s) 832
MalI GATC 7 cut(s) 52, 82, 92, 741, 1262, 1543, 1754
MboI GATC 7 cut(s) 50, 80, 90, 739, 1260, 1541, 1752
MboII GAAGA 7 cut(s) 66, 121, 136, 177, 806, 1464, 1755
MfeI CAATTG 2 cut(s) 1066, 1403
MflI RGATCY 1 cut(s) 80
MhlI GDGCHC 3 cut(s) 264, 608, 1234
MlsI TGGCCA 1 cut(s) 29
MluCI AATT 6 cut(s) 181, 403, 986, 1066, 1379, 1403
MluNI TGGCCA 1 cut(s) 29
Mly113I GGCGCC 1 cut(s) 42
MlyI GAGTC 2 cut(s) 695, 1285
MmeI TCCRAC 4 cut(s) 108, 703, 1260, 1489
Mox20I TGGCCA 1 cut(s) 29
MroI TCCGGA 1 cut(s) 77
MroNI GCCGGC 1 cut(s) 101
MscI TGGCCA 1 cut(s) 29
MseI TTAA 6 cut(s) 639, 666, 750, 1173, 1329, 1739
Msp20I TGGCCA 1 cut(s) 29
MspA1I CMGCKG 2 cut(s) 1240, 1445
MspI CCGG 5 cut(s) 78, 102, 389, 395, 422
MspR9I CCNGG 2 cut(s) 26, 396
MunI CAATTG 2 cut(s) 1066, 1403
Mva1269I GAATGC 1 cut(s) 630
MvaI CCWGG 1 cut(s) 26
MwoI GCNNNNNNNGC 4 cut(s) 247, 1187, 1511, 1610
NaeI GCCGGC 1 cut(s) 103
NarI GGCGCC 1 cut(s) 42
NciI CCSGG 1 cut(s) 396
NdeII GATC 7 cut(s) 50, 80, 90, 739, 1260, 1541, 1752
NgoMIV GCCGGC 1 cut(s) 101
NlaIII CATG 4 cut(s) 464, 505, 697, 1390
NlaIV GGNNCC 8 cut(s) 43, 82, 118, 171, 393, 607, 828, 1630
NmeAIII GCCGAG 2 cut(s) 18, 1084
NspV TTCGAA 1 cut(s) 60
PcsI WCGNNNNNNNCGW 2 cut(s) 66, 105
PctI GAATGC 1 cut(s) 630
PdiI GCCGGC 1 cut(s) 103
PfeI GAWTC 6 cut(s) 202, 338, 446, 488, 647, 1126
Pfl23II CGTACG 1 cut(s) 15
PflMI CCANNNNNTGG 1 cut(s) 481
PfoI TCCNGGA 1 cut(s) 394
PkrI GCNGC 6 cut(s) 107, 137, 158, 630, 982, 1239
PleI GAGTC 2 cut(s) 694, 1285
PluTI GGCGCC 1 cut(s) 45
PpsI GAGTC 2 cut(s) 694, 1285
PshAI GACNNNNGTC 1 cut(s) 1669
Psp124BI GAGCTC 2 cut(s) 264, 1234
Psp6I CCWGG 1 cut(s) 24
PspFI CCCAGC 2 cut(s) 250, 1286
PspGI CCWGG 1 cut(s) 24
PspLI CGTACG 1 cut(s) 15
PspN4I GGNNCC 8 cut(s) 43, 82, 118, 171, 393, 607, 828, 1630
PspPI GGNCC 1 cut(s) 1100
PstI CTGCAG 2 cut(s) 1239, 1501
PstNI CAGNNNCTG 2 cut(s) 111, 689
PsuI RGATCY 1 cut(s) 80
PvuII CAGCTG 2 cut(s) 1240, 1445
RsaI GTAC 3 cut(s) 17, 1373, 1526
RsaNI GTAC 3 cut(s) 16, 1372, 1525
SacI GAGCTC 2 cut(s) 264, 1234
SalI GTCGAC 1 cut(s) 1662
SaqAI TTAA 6 cut(s) 639, 666, 750, 1173, 1329, 1739
SatI GCNGC 6 cut(s) 106, 136, 157, 629, 981, 1238
Sau3AI GATC 7 cut(s) 50, 80, 90, 739, 1260, 1541, 1752
Sau96I GGNCC 1 cut(s) 1100
ScaI AGTACT 1 cut(s) 1373
SchI GAGTC 2 cut(s) 695, 1285
ScrFI CCNGG 2 cut(s) 26, 396
SduI GDGCHC 3 cut(s) 264, 608, 1234
SfaNI GCATC 2 cut(s) 955, 1009
SfcI CTRYAG 4 cut(s) 492, 1235, 1497, 1557
SfoI GGCGCC 1 cut(s) 43
SfuI TTCGAA 1 cut(s) 60
Sse9I AATT 6 cut(s) 181, 403, 986, 1066, 1379, 1403
SsiI CCGC 3 cut(s) 133, 136, 156
SspDI GGCGCC 1 cut(s) 41
SspMI CTAG 4 cut(s) 615, 882, 1023, 1508
SstI GAGCTC 2 cut(s) 264, 1234
StyD4I CCNGG 2 cut(s) 24, 394
TaaI ACNGT 7 cut(s) 383, 598, 1015, 1036, 1148, 1162, 1668
TaiI ACGT 1 cut(s) 835
TaqI TCGA 4 cut(s) 60, 147, 449, 1663
TasI AATT 6 cut(s) 181, 403, 986, 1066, 1379, 1403
TatI WGTACW 1 cut(s) 1371
TauI GCSGC 2 cut(s) 138, 159
TfiI GAWTC 6 cut(s) 202, 338, 446, 488, 647, 1126
Tru1I TTAA 6 cut(s) 639, 666, 750, 1173, 1329, 1739
Tru9I TTAA 6 cut(s) 639, 666, 750, 1173, 1329, 1739
TscAI CASTG 7 cut(s) 432, 1039, 1151, 1167, 1183, 1482, 1501
TseI GCWGC 4 cut(s) 105, 628, 980, 1237
TspDTI ATGAA 2 cut(s) 501, 710
TspGWI ACGGA 1 cut(s) 582
TspRI CASTG 7 cut(s) 432, 1039, 1151, 1167, 1183, 1482, 1501
Van91I CCANNNNNTGG 1 cut(s) 481
XagI CCTNNNNNAGG 1 cut(s) 164
XapI RAATTY 3 cut(s) 181, 403, 986
XbaI TCTAGA 1 cut(s) 1022
XcmI CCANNNNNNNNNTGG 2 cut(s) 1283, 1699
XmiI GTMKAC 1 cut(s) 1663
XspI CTAG 4 cut(s) 615, 882, 1023, 1508
ZrmI AGTACT 1 cut(s) 1373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.