Rh1BG385100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
51304857 .. 51311033
6177 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG385100.1

Sequence Viewer

Length: 3537 bp
ATGATGAATACAGTACGAGTAGAACTTACAAATTCTATTAGTCCAGATTTGAGTTGGAAGGTTTCTAAGGGTTACAGAAGTGCACCAAGGCGAAGGAAACAGGTTGATAAAGGACCAAAATTGGGTGCGGAGCCAGCAAATAAAAGTACTAAAAGTTCATCTGAAACAACTGTTTCTGAATCAGAGAAGCTTGGTGTGGCTGTACTTGGAAGACGGTTCAGTGACAAAATTGAGCATGTGCCGATTAAGAAAAGAAGATTTATGGTCCGTTCTCCGTCACCACCCCCTCGCTTATCTTCTCAGTTACCTGAAAACAATCAACCAGGTGTGGGTAATCTACGTGCTTCAGGTCAGAAGTCATGTTCTAAATCAATTGCCAAAAAGCATACAACAAGGAGTGATACTTCTTCAGTGACTAGTTTTACTCATAGTGCTGTTACTGTTAGCGAGAGTTTAACTGAGCCGGCAAATGAAAAGCCTGGTTATGGGGAGGACTTCTCTGGTATTGAGATATTGGCTGCTGCTGCCTGCAACAACAGCATACATGATGATATAGGTGAAGAATTATCACGAGAGGGGACAAATGCATCAACCTCTGCAAGGCCCTTGGCGAAAACTGTTGCATCGTTTTCATCAACGCCAATGATAACTGATTCAGAGATATCAGAAGGAAGAGATGCATCATTGGAAACAATTCATTATTCACCTAAAGATGTAGTACATGAAGATAAAATAGAGAACTCCTTTGTTGAGGATAGCCTGGTTAAAACTAATACTGGTGATGGAGATGACCAAGCAGTAGCGTCTTCAAAGGATGTTAGGTTGCACTGGGATCTAAATGTTTGTATGGATGCTTGGGAGGAGCCTTCTGATACGGTGATGGTTGATCCTCAAGCAAATGCTGTAGACGACATCTCTATTGACAGACAGAGTGAAAAGCAGCCAGTTTCACAAGATGGTGACGCACAGGGATCCGTAGAAGCTAAGAATCCTGAACTGCTTCCTGTGGTTGATGATGTGGAACAGGGATTGAAAGCATCCCCGGACTCTGAAATAAGTTATGGTAAAAGTGGCCTGGCTGATAATGCTCTAGGATCTTCAAAAGATGCAGGTGTGGTTACAGACAATTCCAATCAGGATGTCAGCATGGATGCATGTGGTGATAATTCCTCCTGTGTTCGCTTTGACAATATTGCAGGCACAGTAGGTGTGCCTTTAGAAAATAATAGAACACCACCTGCCAGTATTGGTGCACAACTGGGTGACACTAACTGTTCAGGAAAGATCCAGCTCGAAAACCCTGCTATAACTTGTGTGCCTGTTGTGGAAGGGGTTTCTTGTGAGATGGGCAGCACTGTTGTAGATGATGATGGTAAGGGCTCTGCTGCAACATCCAGCTTCCATGATGATCCAAAATCTCCGGAAGAGATGACAGCGGTCGAGAGCTGTCACTTACAGAAGAGTTGTCCAGAGGTCAAGCCTGTATGCAAAACAGAAGATGTGATTAAGCCTGCATCAGGTGCATCTGTTGGTGAAGGCCTCTCTTTGGTGACTTTAATCGTAAAGGATCAGGTTGAAGCTGCATCTCAGATTCATACTGTTAATTCTCTACAAAATGCTGGGTCTCTAGAAGTAATGCCTAAATCTTCTGTGAGTGCCACAAAGGATCCACCAGCTGATGCTGGTCCCTCCCGTCACGAGCAATGCCACTATGGTGATGGTACTGCAGGAAGTAAAGTCACTACAGTAGATTCTTCTGGTGTCAACAGTCACTTGGATGATAAGGATCACATGGTTGCCAACAACAACCCTACGGAACAGGAGGTCGGATATGATTCTCAATATGAGGACGGGGAGTTGAGGGAATCAGATGTACCTTATTGGGAGGAGAATGAATTTGACGAAGTTGAACGTGTTGATTATGGTTCTGATACATGTGACACTGATGCTGCTGATGGCTCTGTATCAGGAAAAGTGGAATGCAGAGAAACTGAATTTTGCGGGGTAGAATCTAGGAACATTAACATGAACGTACAGGTTGTGCGAGGATTGAGCCTAGGTTCTGATAATATGTGTGGAAAAGTTGAACATAGTGCGACTGGAAATGCTTTGAGACAATCTTCTGTGGGTTCAAAGACGAGAACTTCTGGATCTGAACAATTGCCCGGTGATTCTGAAGCTTCTTCAAACAGAACTGCAGGAGCAACTGAGGGTTGCACAATAAGAAAACATACTGGTGATTGCTTTGATGGCCTTAATGGCAAAGATCCTGCCAAAGTGGATGGATCAATGACATCTGATACCTTGAATAGGATGGGAGCTTCTTCTGGGAGGAGGTATGACTCTTTTGATTTCTCCACTCACTCTGAGGAGGTCGGTTCTGATTATTCCATGGGAAAGGAAAGATCTGATTCACGTATGCTTGGTAAGAGTTTGGGAGGTGTTCGTTTTGCTTCTAGGAGTTATTGGGATTCCAAACGTCGTGGATCACCATCTTATCGTGGTTCCTTTGGTTCTGGCCGCCCTAGACCAAGAAGTGGTATCGAGAGTGATGAATATGCAATGGATCCAGATGATACATTTTCAGAAGCGGCAGAGGTTGCAGGAGTTCACAATCGTGTTCGCAGACAAGCTATGAGTTATAATTCAAATCGTTCTTATCAGCCCACATTTAGAAGAAGATCCCCAGATACACATAGGGGGATGATACCTATGAGGGATATAAGTCCTGATAGGAGGAGAAGATATCCACAAGGGGTTGGTAGAGGTATGCGGGATTACCACAGGCCTATTCCCAACGAGCTCAACGACAGTTCTTATGATGGGCCACGTCGTATGACCAGGAGAGAACCAAGCGCATCTCCCCCCGGCAGAGGACCTTATTATGGTAGACCCAAGTTCCAGTCTAGAGGCAGAAGTCGATCTCCTCTTGCATGGGAACGGAATGAAGTTTCAAGACATCGTGGTAGCAGGTCCCCTGATTATAGATTTGATGGTAAAATGGAGAGGGGGAGAGTGCCCTTTCAGAAGAACAGTTTTGGAGCAAAGTATGAAGCAGGGTTCTTTTCCCCACCAAAACGTCGGTTTTCCCCACAACACAATTCAAGATGGTTTGATGATCGCAATGGTGCTGGAGATCATAATTTCAGAGGCAGGAGAGGAGGTGGAAGGAGATTCCAACCGAGCCAAAGGTTTGATTCAGTGCGTTCTCGGAGAGTGGATTCAGAAGATTATTTTGAACCCATTGTTCGTCCAAGATTCTCAGAGTTGAACAGTGGTGGTAGGGAATGTAGATTCGAGGGCAGTGATGAAGATAGAAGGAAGCCTGAAGGAAGATTTCAAATTGTTCATCGTGTGCGGCGTTATGATTCTGAAGGTGTTGTGCGTCAGTTCCGTTACGATGAAGAAGATCGGTTTGCATCCCGCAATACACAGAACTTTGATGACTGTGATAATAGGGGCGCTGATCGACGGACTCGAGATGTTTACCTAGGAGAGCAGCAGCAGATAGAGAACAGAAGGGTACCTAAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1178

Amino Acids

129.42

Weight (kDa)

5.75

Isoelectric Point (pI)

60.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2643
AarI CACCTGC 2 cut(s) 1100, 1246
Acc36I ACCTGC 3 cut(s) 1100, 1246, 2961
Acc65I GGTACC 1 cut(s) 3523
AccB1I GGYRCC 1 cut(s) 3523
AccB7I CCANNNNNTGG 1 cut(s) 2537
AccI GTMKAC 2 cut(s) 906, 2890
AccIII TCCGGA 1 cut(s) 1420
AciI CCGC 8 cut(s) 128, 1436, 2001, 2521, 2591, 2773, 3358, 3424
AcoI YGGCCR 1 cut(s) 2518
AcsI RAATTY 3 cut(s) 31, 1895, 1994
AcuI CTGAAG 5 cut(s) 330, 393, 2196, 3348, 3393
AfaI GTAC 8 cut(s) 15, 148, 204, 720, 1723, 1875, 2034, 3525
AflIII ACRYGT 2 cut(s) 1912, 1934
AhlI ACTAGT 1 cut(s) 416
AjiI CACGTC 1 cut(s) 2831
AjnI CCWGG 5 cut(s) 322, 478, 759, 1074, 2840
AleI CACNNNNGTG 2 cut(s) 1713, 2616
Alw21I GWGCWC 3 cut(s) 85, 1255, 2805
Alw26I GTCTC 2 cut(s) 1629, 2107
Alw44I GTGCAC 2 cut(s) 81, 1251
Ama87I CYCGRG 1 cut(s) 3477
Aor13HI TCCGGA 1 cut(s) 1420
AoxI GGCC 7 cut(s) 602, 1072, 1537, 2251, 2518, 2786, 2825
ApaLI GTGCAC 2 cut(s) 81, 1251
ApoI RAATTY 3 cut(s) 31, 1895, 1994
Asp700I GAANNNNTTC 2 cut(s) 693, 999
Asp718I GGTACC 1 cut(s) 3523
AspA2I CCTAGG 2 cut(s) 2056, 3490
AspLEI GCGC 2 cut(s) 2858, 3464
AspS9I GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2876, 2973
AsuC2I CCSGG 3 cut(s) 1043, 2166, 2868
AvaI CYCGRG 1 cut(s) 3477
AvaII GGWCC 5 cut(s) 113, 265, 1685, 2876, 2973
AvrII CCTAGG 2 cut(s) 2056, 3490
BaeGI GKGCMC 3 cut(s) 85, 1255, 3021
BamHI GGATCC 3 cut(s) 971, 1666, 2566
BanI GGYRCC 1 cut(s) 3523
BanII GRGCYC 2 cut(s) 1382, 2805
BauI CACGAG 2 cut(s) 570, 1697
BbsI GAAGAC 2 cut(s) 217, 798
Bbv12I GWGCWC 3 cut(s) 85, 1255, 2805
BcgI CGANNNNNNTGC 2 cut(s) 1283, 1317
BciT130I CCWGG 5 cut(s) 324, 480, 761, 1076, 2842
BcnI CCSGG 3 cut(s) 1043, 2166, 2868
BcoDI GTCTC 2 cut(s) 1629, 2107
BcuI ACTAGT 1 cut(s) 416
BfaI CTAG 9 cut(s) 417, 1091, 1628, 2013, 2057, 2457, 2526, 2907, 3491
BfmI CTRYAG 4 cut(s) 903, 1725, 1743, 2196
BfoI RGCGCY 1 cut(s) 3465
BfuAI ACCTGC 3 cut(s) 1100, 1246, 2961
BglI GCCNNNNNGGC 1 cut(s) 2259
BglII AGATCT 1 cut(s) 2405
BlnI CCTAGG 2 cut(s) 2056, 3490
BmcAI AGTACT 1 cut(s) 148
Bme1390I CCNGG 8 cut(s) 324, 480, 761, 1043, 1076, 2166, 2842, 2868
Bme18I GGWCC 5 cut(s) 113, 265, 1685, 2876, 2973
BmeT110I CYCGRG 1 cut(s) 3477
BmgBI CACGTC 1 cut(s) 2831
BmgT120I GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2876, 2973
BmiI GGNNCC 9 cut(s) 132, 864, 973, 1668, 1687, 2506, 2568, 2975, 3525
BmrFI CCNGG 8 cut(s) 324, 480, 761, 1043, 1076, 2166, 2842, 2868
BmrI ACTGGG 2 cut(s) 838, 1268
BmuI ACTGGG 2 cut(s) 838, 1268
BoxI GACNNNNGTC 1 cut(s) 1436
BpiI GAAGAC 2 cut(s) 217, 798
BplI GAGNNNNNCTC 2 cut(s) 482, 514
BpmI CTGGAG 1 cut(s) 3153
Bpu10I CCTNAGC 1 cut(s) 3528
BpuEI CTTGAG 1 cut(s) 876
BpuMI CCSGG 3 cut(s) 1043, 2166, 2868
BsaAI YACGTR 2 cut(s) 341, 2417
BsaBI GATNNNNATC 2 cut(s) 1785, 2491
BsaI GGTCTC 1 cut(s) 1629
BsaJI CCNNGG 7 cut(s) 86, 606, 1041, 2056, 2391, 2866, 3490
BsaWI WCCGGW 1 cut(s) 1420
BsaXI ACNNNNNCTCC 2 cut(s) 3148, 3178
Bse118I RCCGGY 1 cut(s) 463
Bse1I ACTGG 8 cut(s) 781, 833, 944, 1242, 1263, 2104, 2239, 2902
Bse3DI GCAATG 3 cut(s) 1709, 2568, 3130
Bse8I GATNNNNATC 2 cut(s) 1785, 2491
BseAI TCCGGA 1 cut(s) 1420
BseBI CCWGG 5 cut(s) 324, 480, 761, 1076, 2842
BseDI CCNNGG 7 cut(s) 86, 606, 1041, 2056, 2391, 2866, 3490
BseJI GATNNNNATC 2 cut(s) 1785, 2491
BseMI GCAATG 3 cut(s) 1709, 2568, 3130
BseMII CTCAG 6 cut(s) 314, 450, 1601, 2199, 2358, 3276
BseNI ACTGG 8 cut(s) 781, 833, 944, 1242, 1263, 2104, 2239, 2902
BseRI GAGGAG 7 cut(s) 875, 1901, 2347, 2384, 2752, 2916, 3174
BseSI GKGCMC 3 cut(s) 85, 1255, 3021
BseYI CCCAGC 1 cut(s) 1619
Bsh1285I CGRYCG 1 cut(s) 1440
BshFI GGCC 7 cut(s) 604, 1074, 1539, 2253, 2520, 2788, 2827
BshNI GGYRCC 1 cut(s) 3523
BsiEI CGRYCG 1 cut(s) 1440
BsiHKAI GWGCWC 3 cut(s) 85, 1255, 2805
BsiHKCI CYCGRG 1 cut(s) 3477
BsiSI CCGG 5 cut(s) 464, 1043, 1421, 2166, 2868
BslFI GGGAC 3 cut(s) 592, 1671, 2959
BsmAI GTCTC 2 cut(s) 1629, 2107
BsmFI GGGAC 3 cut(s) 592, 1671, 2959
BsmI GAATGC 1 cut(s) 1985
BsnI GGCC 7 cut(s) 604, 1074, 1539, 2253, 2520, 2788, 2827
Bso31I GGTCTC 1 cut(s) 1629
BsoBI CYCGRG 1 cut(s) 3477
Bsp1286I GDGCHC 5 cut(s) 85, 1255, 1382, 2805, 3021
Bsp13I TCCGGA 1 cut(s) 1420
Bsp19I CCATGG 1 cut(s) 2391
BspACI CCGC 8 cut(s) 128, 1436, 2001, 2521, 2591, 2773, 3358, 3424
BspANI GGCC 7 cut(s) 604, 1074, 1539, 2253, 2520, 2788, 2827
BspCNI CTCAG 6 cut(s) 313, 451, 1600, 2200, 2359, 3275
BspEI TCCGGA 1 cut(s) 1420
BspLI GGNNCC 9 cut(s) 132, 864, 973, 1668, 1687, 2506, 2568, 2975, 3525
BspMAI CTGCAG 2 cut(s) 1729, 2200
BspMI ACCTGC 3 cut(s) 1100, 1246, 2961
BspT107I GGYRCC 1 cut(s) 3523
BspTNI GGTCTC 1 cut(s) 1629
BsrDI GCAATG 3 cut(s) 1709, 2568, 3130
BsrFI RCCGGY 1 cut(s) 463
BsrI ACTGG 8 cut(s) 781, 833, 944, 1242, 1263, 2104, 2239, 2902
BssAI RCCGGY 1 cut(s) 463
BssECI CCNNGG 7 cut(s) 86, 606, 1041, 2056, 2391, 2866, 3490
BssSI CACGAG 2 cut(s) 570, 1697
BssT1I CCWWGG 5 cut(s) 86, 606, 2056, 2391, 3490
Bst2BI CACGAG 2 cut(s) 570, 1697
Bst2UI CCWGG 5 cut(s) 324, 480, 761, 1076, 2842
Bst6I CTCTTC 3 cut(s) 667, 1419, 1454
BstAPI GCANNNNNTGC 2 cut(s) 1520, 2600
BstBAI YACGTR 2 cut(s) 341, 2417
BstC8I GCNNGC 5 cut(s) 135, 465, 529, 1198, 1512
BstDEI CTNAG 9 cut(s) 66, 300, 459, 984, 1587, 2208, 2367, 3262, 3528
BstDSI CCRYGG 1 cut(s) 2391
BstENI CCTNNNNNAGG 3 cut(s) 598, 1515, 2308
BstH2I RGCGCY 1 cut(s) 3465
BstHHI GCGC 2 cut(s) 2858, 3464
BstMAI GTCTC 2 cut(s) 1629, 2107
BstMCI CGRYCG 1 cut(s) 1440
BstMWI GCNNNNNNNGC 8 cut(s) 134, 524, 537, 1085, 1520, 2250, 2259, 2600
BstNI CCWGG 5 cut(s) 324, 480, 761, 1076, 2842
BstNSI RCATGY 3 cut(s) 239, 1158, 1938
BstPAI GACNNNNGTC 1 cut(s) 1436
BstSCI CCNGG 8 cut(s) 322, 478, 759, 1041, 1074, 2164, 2840, 2866
BstSFI CTRYAG 4 cut(s) 903, 1725, 1743, 2196
BstSLI GKGCMC 3 cut(s) 85, 1255, 3021
BstV2I GAAGAC 2 cut(s) 217, 798
BsuRI GGCC 7 cut(s) 604, 1074, 1539, 2253, 2520, 2788, 2827
BtgI CCRYGG 1 cut(s) 2391
BtrI CACGTC 1 cut(s) 2831
BtsI GCAGTG 1 cut(s) 3310
BtsIMutI CAGTG 8 cut(s) 226, 417, 826, 1353, 1941, 3207, 3280, 3310
BveI ACCTGC 3 cut(s) 1100, 1246, 2961
Cac8I GCNNGC 5 cut(s) 135, 465, 529, 1198, 1512
CfoI GCGC 2 cut(s) 2858, 3464
Cfr10I RCCGGY 1 cut(s) 463
Cfr13I GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2876, 2973
CseI GACGC 3 cut(s) 792, 971, 3374
CsiI ACCWGGT 1 cut(s) 322
Csp6I GTAC 8 cut(s) 14, 147, 203, 719, 1722, 1874, 2033, 3524
CspCI CAANNNNNGTGG 2 cut(s) 2464, 2499
CviQI GTAC 8 cut(s) 14, 147, 203, 719, 1722, 1874, 2033, 3524
DdeI CTNAG 9 cut(s) 66, 300, 459, 984, 1587, 2208, 2367, 3262, 3528
EaeI YGGCCR 1 cut(s) 2518
Eam1104I CTCTTC 3 cut(s) 667, 1419, 1454
EarI CTCTTC 3 cut(s) 667, 1419, 1454
Ecl136II GAGCTC 1 cut(s) 2803
Eco130I CCWWGG 5 cut(s) 86, 606, 2056, 2391, 3490
Eco147I AGGCCT 2 cut(s) 1539, 2788
Eco24I GRGCYC 2 cut(s) 1382, 2805
Eco31I GGTCTC 1 cut(s) 1629
Eco32I GATATC 2 cut(s) 663, 2747
Eco47I GGWCC 5 cut(s) 113, 265, 1685, 2876, 2973
Eco53kI GAGCTC 1 cut(s) 2803
Eco57I CTGAAG 5 cut(s) 330, 393, 2196, 3348, 3393
Eco88I CYCGRG 1 cut(s) 3477
EcoICRI GAGCTC 1 cut(s) 2803
EcoNI CCTNNNNNAGG 3 cut(s) 598, 1515, 2308
EcoO109I RGGNCCY 3 cut(s) 603, 2876, 2973
EcoRII CCWGG 5 cut(s) 322, 478, 759, 1074, 2840
EcoRV GATATC 2 cut(s) 663, 2747
EcoT14I CCWWGG 5 cut(s) 86, 606, 2056, 2391, 3490
EcoT22I ATGCAT 3 cut(s) 589, 682, 1156
EcoT38I GRGCYC 2 cut(s) 1382, 2805
ErhI CCWWGG 5 cut(s) 86, 606, 2056, 2391, 3490
FaqI GGGAC 3 cut(s) 592, 1671, 2959
FauI CCCGC 3 cut(s) 1994, 2766, 3431
FblI GTMKAC 2 cut(s) 906, 2890
FriOI GRGCYC 2 cut(s) 1382, 2805
FspBI CTAG 9 cut(s) 417, 1091, 1628, 2013, 2057, 2457, 2526, 2907, 3491
GlaI GCGC 2 cut(s) 2857, 3463
GsaI CCCAGC 1 cut(s) 1623
GsuI CTGGAG 1 cut(s) 3153
HaeII RGCGCY 1 cut(s) 3465
HaeIII GGCC 7 cut(s) 604, 1074, 1539, 2253, 2520, 2788, 2827
HapII CCGG 5 cut(s) 464, 1043, 1421, 2166, 2868
HgaI GACGC 3 cut(s) 792, 971, 3374
HhaI GCGC 2 cut(s) 2858, 3464
Hin6I GCGC 2 cut(s) 2856, 3462
HinP1I GCGC 2 cut(s) 2856, 3462
HincII GTYRAC 1 cut(s) 1765
HindII GTYRAC 1 cut(s) 1765
HindIII AAGCTT 2 cut(s) 188, 2178
HpaII CCGG 5 cut(s) 464, 1043, 1421, 2166, 2868
Hpy166II GTNNAC 7 cut(s) 83, 907, 1253, 1765, 2611, 2891, 3487
Hpy8I GTNNAC 7 cut(s) 83, 907, 1253, 1765, 2611, 2891, 3487
Hpy99I CGWCG 4 cut(s) 2484, 2835, 3084, 3474
HpyCH4IV ACGT 7 cut(s) 340, 1912, 2031, 2416, 2479, 2830, 3079
HpyF10VI GCNNNNNNNGC 8 cut(s) 134, 524, 537, 1085, 1520, 2250, 2259, 2600
HpyF3I CTNAG 9 cut(s) 66, 300, 459, 984, 1587, 2208, 2367, 3262, 3528
HpySE526I ACGT 7 cut(s) 340, 1912, 2031, 2416, 2479, 2830, 3079
HspAI GCGC 2 cut(s) 2856, 3462
Kpn2I TCCGGA 1 cut(s) 1420
KpnI GGTACC 1 cut(s) 3527
KroI GCCGGC 1 cut(s) 463
KroNI GCCGGC 1 cut(s) 465
LmnI GCTCC 5 cut(s) 130, 862, 2201, 2318, 3041
MabI ACCWGGT 1 cut(s) 322
MaeI CTAG 9 cut(s) 417, 1091, 1628, 2013, 2057, 2457, 2526, 2907, 3491
MaeII ACGT 7 cut(s) 340, 1912, 2031, 2416, 2479, 2830, 3079
MfeI CAATTG 2 cut(s) 372, 2159
MhlI GDGCHC 5 cut(s) 85, 1255, 1382, 2805, 3021
MlyI GAGTC 3 cut(s) 1040, 2336, 3469
MmeI TCCRAC 3 cut(s) 35, 1807, 3202
Mph1103I ATGCAT 3 cut(s) 589, 682, 1156
MroI TCCGGA 1 cut(s) 1420
MroNI GCCGGC 1 cut(s) 463
MroXI GAANNNNTTC 2 cut(s) 693, 999
MseI TTAA 8 cut(s) 246, 455, 765, 1506, 1556, 1602, 2022, 2256
MslI CAYNNNNRTG 5 cut(s) 1713, 1776, 2024, 2235, 2616
MspA1I CMGCKG 2 cut(s) 1436, 1676
MspI CCGG 5 cut(s) 464, 1043, 1421, 2166, 2868
MspR9I CCNGG 8 cut(s) 324, 480, 761, 1043, 1076, 2166, 2842, 2868
MunI CAATTG 2 cut(s) 372, 2159
Mva1269I GAATGC 1 cut(s) 1985
MvaI CCWGG 5 cut(s) 324, 480, 761, 1076, 2842
MwoI GCNNNNNNNGC 8 cut(s) 134, 524, 537, 1085, 1520, 2250, 2259, 2600
NaeI GCCGGC 1 cut(s) 465
NciI CCSGG 3 cut(s) 1043, 2166, 2868
NcoI CCATGG 1 cut(s) 2391
NgoMIV GCCGGC 1 cut(s) 463
NlaIV GGNNCC 9 cut(s) 132, 864, 973, 1668, 1687, 2506, 2568, 2975, 3525
NsiI ATGCAT 3 cut(s) 589, 682, 1156
NspI RCATGY 3 cut(s) 239, 1158, 1938
OliI CACNNNNGTG 2 cut(s) 1713, 2616
PaeR7I CTCGAG 1 cut(s) 3477
PaqCI CACCTGC 2 cut(s) 1100, 1246
PceI AGGCCT 2 cut(s) 1539, 2788
PciI ACATGT 1 cut(s) 1934
PcsI WCGNNNNNNNCGW 3 cut(s) 2805, 3358, 3475
PctI GAATGC 1 cut(s) 1985
PdiI GCCGGC 1 cut(s) 465
PdmI GAANNNNTTC 2 cut(s) 693, 999
PflMI CCANNNNNTGG 1 cut(s) 2537
PleI GAGTC 3 cut(s) 1040, 2336, 3469
PpsI GAGTC 3 cut(s) 1040, 2336, 3469
Ppu21I YACGTR 2 cut(s) 341, 2417
PpuMI RGGWCCY 2 cut(s) 2876, 2973
PscI ACATGT 1 cut(s) 1934
PshAI GACNNNNGTC 1 cut(s) 1436
PsiI TTATAA 1 cut(s) 2643
Psp124BI GAGCTC 1 cut(s) 2805
Psp5II RGGWCCY 2 cut(s) 2876, 2973
Psp6I CCWGG 5 cut(s) 322, 478, 759, 1074, 2840
PspFI CCCAGC 1 cut(s) 1619
PspGI CCWGG 5 cut(s) 322, 478, 759, 1074, 2840
PspN4I GGNNCC 9 cut(s) 132, 864, 973, 1668, 1687, 2506, 2568, 2975, 3525
PspPI GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2876, 2973
PspPPI RGGWCCY 2 cut(s) 2876, 2973
PsrI GAACNNNNNNTAC 2 cut(s) 139, 171
PstI CTGCAG 2 cut(s) 1729, 2200
PvuII CAGCTG 1 cut(s) 1676
RsaI GTAC 8 cut(s) 15, 148, 204, 720, 1723, 1875, 2034, 3525
RsaNI GTAC 8 cut(s) 14, 147, 203, 719, 1722, 1874, 2033, 3524
RseI CAYNNNNRTG 5 cut(s) 1713, 1776, 2024, 2235, 2616
SacI GAGCTC 1 cut(s) 2805
SaqAI TTAA 8 cut(s) 246, 455, 765, 1506, 1556, 1602, 2022, 2256
Sau96I GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2876, 2973
ScaI AGTACT 1 cut(s) 148
SchI GAGTC 3 cut(s) 1040, 2336, 3469
ScrFI CCNGG 8 cut(s) 324, 480, 761, 1043, 1076, 2166, 2842, 2868
SduI GDGCHC 5 cut(s) 85, 1255, 1382, 2805, 3021
SexAI ACCWGGT 1 cut(s) 322
SfcI CTRYAG 4 cut(s) 903, 1725, 1743, 2196
Sfr274I CTCGAG 1 cut(s) 3477
SinI GGWCC 5 cut(s) 113, 265, 1685, 2876, 2973
SlaI CTCGAG 1 cut(s) 3477
SmiMI CAYNNNNRTG 5 cut(s) 1713, 1776, 2024, 2235, 2616
SmlI CTYRAG 2 cut(s) 891, 3477
SmoI CTYRAG 2 cut(s) 891, 3477
SpeI ACTAGT 1 cut(s) 416
SseBI AGGCCT 2 cut(s) 1539, 2788
SsiI CCGC 8 cut(s) 128, 1436, 2001, 2521, 2591, 2773, 3358, 3424
SspI AATATT 1 cut(s) 1192
SspMI CTAG 9 cut(s) 417, 1091, 1628, 2013, 2057, 2457, 2526, 2907, 3491
SstI GAGCTC 1 cut(s) 2805
StuI AGGCCT 2 cut(s) 1539, 2788
StyD4I CCNGG 8 cut(s) 322, 478, 759, 1041, 1074, 2164, 2840, 2866
StyI CCWWGG 5 cut(s) 86, 606, 2056, 2391, 3490
TaiI ACGT 7 cut(s) 343, 1915, 2034, 2419, 2482, 2833, 3082
TaqI TCGA 7 cut(s) 1293, 1440, 2544, 2920, 3297, 3469, 3478
TatI WGTACW 3 cut(s) 146, 202, 718
TauI GCSGC 3 cut(s) 2523, 2594, 3361
Tru1I TTAA 8 cut(s) 246, 455, 765, 1506, 1556, 1602, 2022, 2256
Tru9I TTAA 8 cut(s) 246, 455, 765, 1506, 1556, 1602, 2022, 2256
TscAI CASTG 8 cut(s) 226, 417, 833, 1360, 1948, 3207, 3280, 3310
TspGWI ACGGA 7 cut(s) 257, 264, 964, 1829, 2956, 3383, 3487
TspRI CASTG 8 cut(s) 226, 417, 833, 1360, 1948, 3207, 3280, 3310
Van91I CCANNNNNTGG 1 cut(s) 2537
VneI GTGCAC 2 cut(s) 81, 1251
VpaK11BI GGWCC 5 cut(s) 113, 265, 1685, 2876, 2973
XagI CCTNNNNNAGG 3 cut(s) 598, 1515, 2308
XapI RAATTY 3 cut(s) 31, 1895, 1994
XbaI TCTAGA 2 cut(s) 1627, 2906
XceI RCATGY 3 cut(s) 239, 1158, 1938
XcmI CCANNNNNNNNNTGG 2 cut(s) 51, 1715
XhoI CTCGAG 1 cut(s) 3477
XmaJI CCTAGG 2 cut(s) 2056, 3490
XmiI GTMKAC 2 cut(s) 906, 2890
XmnI GAANNNNTTC 2 cut(s) 693, 999
XspI CTAG 9 cut(s) 417, 1091, 1628, 2013, 2057, 2457, 2526, 2907, 3491
ZrmI AGTACT 1 cut(s) 148
Zsp2I ATGCAT 3 cut(s) 589, 682, 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.