Rroxscaffold_4G00280780

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001112
Physical Location & Seq
Reverse (-)
3215072 .. 3221048
5977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00280780.1

Sequence Viewer

Length: 3270 bp
ATGATGAATACAGTACGTGTAGAACTTACAAATTCTATTAGTCCAGATTTGAGTTGGAAGGTTTCTAAGGGTTACAGAAGTGCACCAAGGCGAAGGAAACAGGTTGATAAAGGACCAAAATTGGGTGCGGAGCCAGCAAATAGAAGTACTAAAAGTTCATCTGAAACGACTGTTTCTGAATCAGAGAAGCTTGGTGTGGCTGTACTTGGAAGACGGTTCAGCGACAAAATTGAGCATGTGCCGATTAAGAAAAGAAGATTTATGGTCCGTTCTCCGTCACCACCCCCTCGCTTATCTTCACAGTTACCTGAAAACAATCAACCTGGTGTGGGTTATCTACGTGCTTCAGGTCAGAAGTCATGTTCTAAATCAATTGCCAAAAAGCATACAACAAGGAGTGATACTTCTTCAGTGACTAGTTTTACTCATAGTGCTGTTACTGTTAATGAGAGTTTAACTGAGCTGGCAAATGAAAAGCCTGGTTATGGGGAGGACTTCTCTGGTATTGAGATATTGGCTGCTGCTGCCTGCAACAACAGCATACATGATGATATAGGTGAAGAATTATCACGAGCGGGGACAAATGCATCAACCTCTGCGAGGCCCTTGGCGAAAGCTGTTGCATCCTTTTCATCAACGCCAATGATAACTGATTCAGAGATATCAGAAGGAAGAGATGCTTCATTGGAAACAATTCATTATTCGCCTAAAGATGTAGTACATGAAGATAAAATAGAGAACTCCTTTGTTGAGGATAGCCTGGTTAAAACTAATACTGGTGATGGAGATGACCAAGCAGTAGCATCTTCAAAGGATGTTAGGTTGCACTGGGATCTAAATGTTTGTATGGATGCTTGGGAGGAGCCTTGTGATACGGTGATGGTTGATCCTCAAGCAAATGCTGTAGACAACATCTCTATTGACAGACAGAGCAAAAGGCAGCCAGTTTCACAGGATGGTGATGCACAGGGATCCGTAGAAGCTAAGAATCCTGAACTGCTTCCGGTGGTTGATGATGTGGAACAGGGATTGAAAGCATCCCCTGACTCTGAAATAAGTTATGGTAAAAGTGGTCTGGCTGATAATGCTCTAGGATCTTCAAAAGATGCAGGTGTGGTTACAGACAATTCCAATCAGGATCTCAGCATGGATGCATGTGGTGATAATTCCTCCTGTGTTCACTTTGACAATATTGCAGGCACACCTACTGTGCCTTTAGAAAAGAATGGAACACCACCTGCCAGTATTGGCACACAACTGGGTGACACTAACTGTTCAGGAAAGATCCAGCTCGAAATCCCTGCTATAACTTGTGTGCCTGTTGTGGAAGGGGTTTCTTGTGAGATGGGCAGCACTGTTGTAGATGATGATGGTAAGGGCTCTGCTGCAACATCCAGCTTCCATGATGATCCAAAATCTCCTGAAGAGATGACAGCGGTCGAGAGCTGTCACTCACAGAAGAGTTGTCCAGAGGTCAAGCCTGTATGCAAAACAGAAGATGTGATTAAGCCTGCATCAGGTGCATCTGTTGGTGAAGGCCTCTCTTTGGTGACTTTAATTGTAAAGGATCAGGTTGAAGCTGCATCTCAGATTCATACTGTTTATTCTCTACAAAATGCTGGGTCTCTAGAAGTAATGCCTAAATCTTCTGTGAGTGCCACAAAGGATCCACTAGCTGATGCTGGTCCCTCCCGTCACGAGCAATGCCACTATGGTGATGGTACTGCAGGCAGTAAAGTCAGTACAGTAGATTCTTCTGGTGTCAACTGTCACTTGGATGATAAGGATCACATGGTTGCCAACAACAACCCTACGGAACAGGAGGTCGGATATGATTCTCAATATGAGGATGGGGAGTTGAGGGAATCAGATGTGCCTTATTGGGAGGAGAATGAATTTGACGAAGTTGAACGTGTTGATTATGGTTCTGATACATGCGACACTGATGCTGCTGATGGCTCTGTATCAGGAAAAGTGGAATGCAGAGAAACTGAATTTTGCGGGGTAGAATCTAGGAACATTAACATGAATGTACAGGTTGTGCGAGGATTGAGCTTAGGTTCTGATAATATGTGTGGAAAAGTTGAACATAGTGCGACTGGAAATGCTTTGAGACAATCTTCAGTGGGTTCAAAGACGAGAACTTCTGGATCTGAACAATTGCCTGGTGATTCTGAAGCTTCTTCAAACAGAACTGCAGGAGCAACTGAGGGTTGCACAATAAGAAAACATACTGGTGATTGCTTTGATGGCCTTAATGGCAAAGATCCTGCCAAAGTGGATGGATCAACAACATCTGATACCTTGAATAGGATGGGAACTTCATCTGGGAGGAGGTATGACACCTTTGATTTCTCCACTCACTCTGAGGAGGTCGGTTCTGATTATTCCATGGGAAAGGAAAGATCTGATTCACGTATGCTTGGTAAGAGTTTGGGAGGTGTTCGTTTTGCTTCTAGGAGTTATTGGGATTCCAAACGTCGTGGATCACCACCTTATCGTGGTTCCTTTGGTTCTGGCCGCCCTAGACCAAGAAGTGGTATCGAGAGTGATGAATATGCAATGGATCCAGATGATACATTTTCGGAAGCGGCAGAGGTTGCAGGAGTTCACAATCGTGTTCGCAGGCAAGCTATGAGTTATAATTCAAATCGTTCTTATCAGCACACATTTAGAAGAAGATCCCCAGATACACATAGGGGGATGATACCTATGAGGGATATGAGTCCTGAAAGGAGGAGAAGATATTCACAAGGGGTTGGTAGAGGTATGCGGGATTACCACAGGCCTATTCCCGATGAGCTCAACGACAGTTCTTATAATGGGCCACGTCGTATGACCAGGAGAGAACCAAGTGCATCTCCCCCGGCAGAGGACCTTATTATGGCAGACCCAAGTTCCAGTCTAGAGGCAGAAGTCGCTCTCCACTTGCATGGGAACGGAATGAAGTTTCAAGACATCGTGGTAGCAGGTCCCCTGATTATAGATTTGATGGTAAAATGGAGAGGGGGAGAGTGCCCTTTCAGAAGAACAGTTTTGGAGCAAAGTATGAACCAGGGTTCTTTTCCCCACCAAAACGTCGGTTTTCCCCACAACACAATTCAAGATGGTTTGATGATCGCAATGGTGCTGGAGATCATAATTTCAGAGGCAGGAGAGGAGGTGGAAGGAGATTCCAACCGAGCCAAAGGTTTGATTCAGTGCGTTCTCGGAGAGTGGATTCAGATGATTATTTTGAACCCATTGTCCGTCCAAGATTCTCAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1089

Amino Acids

117.62

Weight (kDa)

5.05

Isoelectric Point (pI)

53.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2643, 2820
AarI CACCTGC 2 cut(s) 1100, 1246
Acc36I ACCTGC 3 cut(s) 1100, 1246, 2960
AccB7I CCANNNNNTGG 1 cut(s) 2537
AccBSI CCGCTC 1 cut(s) 575
AccI GTMKAC 1 cut(s) 906
AciI CCGC 7 cut(s) 128, 575, 1436, 2001, 2521, 2591, 2773
AcoI YGGCCR 1 cut(s) 2518
AcsI RAATTY 3 cut(s) 31, 1895, 1994
AcuI CTGAAG 5 cut(s) 330, 393, 1443, 2106, 2196
AfaI GTAC 7 cut(s) 15, 148, 204, 720, 1723, 1744, 2034
AflIII ACRYGT 2 cut(s) 16, 1912
AhlI ACTAGT 1 cut(s) 416
AjiI CACGTC 1 cut(s) 2831
AjnI CCWGG 6 cut(s) 322, 478, 759, 2164, 2840, 3054
AleI CACNNNNGTG 2 cut(s) 1713, 2616
AloI GAACNNNNNNTCC 2 cut(s) 3230, 3262
Alw21I GWGCWC 2 cut(s) 85, 2805
Alw26I GTCTC 2 cut(s) 1629, 2107
Alw44I GTGCAC 1 cut(s) 81
AoxI GGCC 6 cut(s) 602, 1537, 2251, 2518, 2786, 2825
ApaLI GTGCAC 1 cut(s) 81
ApeKI GCWGC 8 cut(s) 518, 521, 524, 940, 1350, 1385, 1580, 1949
ApoI RAATTY 3 cut(s) 31, 1895, 1994
Asp700I GAANNNNTTC 3 cut(s) 693, 999, 2746
AspS9I GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2875, 2972
AsuC2I CCSGG 1 cut(s) 2867
AvaII GGWCC 5 cut(s) 113, 265, 1685, 2875, 2972
BaeGI GKGCMC 2 cut(s) 85, 3020
BamHI GGATCC 3 cut(s) 971, 1666, 2566
BanII GRGCYC 2 cut(s) 1382, 2805
BauI CACGAG 2 cut(s) 570, 1697
BbsI GAAGAC 1 cut(s) 217
Bbv12I GWGCWC 2 cut(s) 85, 2805
BbvI GCAGC 8 cut(s) 505, 508, 511, 952, 1362, 1372, 1567, 1936
BcgI CGANNNNNNTGC 4 cut(s) 1283, 1317, 1928, 1962
BciT130I CCWGG 6 cut(s) 324, 480, 761, 2166, 2842, 3056
BcnI CCSGG 1 cut(s) 2867
BcoDI GTCTC 2 cut(s) 1629, 2107
BcuI ACTAGT 1 cut(s) 416
BfaI CTAG 8 cut(s) 417, 1091, 1628, 1673, 2013, 2457, 2526, 2906
BfmI CTRYAG 3 cut(s) 903, 1725, 2196
BfuAI ACCTGC 3 cut(s) 1100, 1246, 2960
BglI GCCNNNNNGGC 1 cut(s) 2259
BglII AGATCT 1 cut(s) 2405
BmcAI AGTACT 1 cut(s) 148
Bme1390I CCNGG 7 cut(s) 324, 480, 761, 2166, 2842, 2867, 3056
Bme18I GGWCC 5 cut(s) 113, 265, 1685, 2875, 2972
BmgBI CACGTC 1 cut(s) 2831
BmgT120I GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2875, 2972
BmiI GGNNCC 8 cut(s) 132, 864, 973, 1668, 1687, 2506, 2568, 2974
BmrFI CCNGG 7 cut(s) 324, 480, 761, 2166, 2842, 2867, 3056
BmrI ACTGGG 2 cut(s) 838, 1268
BmuI ACTGGG 2 cut(s) 838, 1268
BoxI GACNNNNGTC 1 cut(s) 1436
BpiI GAAGAC 1 cut(s) 217
BplI GAGNNNNNCTC 2 cut(s) 482, 514
BpmI CTGGAG 1 cut(s) 3152
Bpu10I CCTNAGC 1 cut(s) 2056
BpuEI CTTGAG 1 cut(s) 876
BpuMI CCSGG 1 cut(s) 2867
BsaAI YACGTR 3 cut(s) 17, 341, 2417
BsaBI GATNNNNATC 1 cut(s) 1785
BsaI GGTCTC 1 cut(s) 1629
BsaJI CCNNGG 5 cut(s) 86, 606, 2391, 2865, 3055
BsaWI WCCGGW 1 cut(s) 1003
BsaXI ACNNNNNCTCC 2 cut(s) 3147, 3177
Bse1I ACTGG 8 cut(s) 781, 833, 944, 1242, 1263, 2104, 2239, 2901
Bse3DI GCAATG 3 cut(s) 1709, 2568, 3129
Bse8I GATNNNNATC 1 cut(s) 1785
BseBI CCWGG 6 cut(s) 324, 480, 761, 2166, 2842, 3056
BseDI CCNNGG 5 cut(s) 86, 606, 2391, 2865, 3055
BseJI GATNNNNATC 1 cut(s) 1785
BseMI GCAATG 3 cut(s) 1709, 2568, 3129
BseMII CTCAG 5 cut(s) 450, 1156, 1601, 2199, 2358
BseNI ACTGG 8 cut(s) 781, 833, 944, 1242, 1263, 2104, 2239, 2901
BseRI GAGGAG 6 cut(s) 875, 1901, 2347, 2384, 2752, 3173
BseSI GKGCMC 2 cut(s) 85, 3020
BseXI GCAGC 8 cut(s) 505, 508, 511, 952, 1362, 1372, 1567, 1936
BseYI CCCAGC 1 cut(s) 1619
Bsh1285I CGRYCG 1 cut(s) 1440
BshFI GGCC 6 cut(s) 604, 1539, 2253, 2520, 2788, 2827
BsiEI CGRYCG 1 cut(s) 1440
BsiHKAI GWGCWC 2 cut(s) 85, 2805
BsiSI CCGG 2 cut(s) 1004, 2867
BslFI GGGAC 3 cut(s) 592, 1671, 2958
BsmAI GTCTC 2 cut(s) 1629, 2107
BsmFI GGGAC 3 cut(s) 592, 1671, 2958
BsmI GAATGC 1 cut(s) 1985
BsnI GGCC 6 cut(s) 604, 1539, 2253, 2520, 2788, 2827
Bso31I GGTCTC 1 cut(s) 1629
Bsp1286I GDGCHC 4 cut(s) 85, 1382, 2805, 3020
Bsp1407I TGTACA 1 cut(s) 2032
Bsp19I CCATGG 1 cut(s) 2391
BspACI CCGC 7 cut(s) 128, 575, 1436, 2001, 2521, 2591, 2773
BspANI GGCC 6 cut(s) 604, 1539, 2253, 2520, 2788, 2827
BspCNI CTCAG 5 cut(s) 451, 1155, 1600, 2200, 2359
BspLI GGNNCC 8 cut(s) 132, 864, 973, 1668, 1687, 2506, 2568, 2974
BspMAI CTGCAG 2 cut(s) 1729, 2200
BspMI ACCTGC 3 cut(s) 1100, 1246, 2960
BspTNI GGTCTC 1 cut(s) 1629
BsrBI CCGCTC 1 cut(s) 575
BsrDI GCAATG 3 cut(s) 1709, 2568, 3129
BsrGI TGTACA 1 cut(s) 2032
BsrI ACTGG 8 cut(s) 781, 833, 944, 1242, 1263, 2104, 2239, 2901
BssECI CCNNGG 5 cut(s) 86, 606, 2391, 2865, 3055
BssSI CACGAG 2 cut(s) 570, 1697
BssT1I CCWWGG 3 cut(s) 86, 606, 2391
Bst2BI CACGAG 2 cut(s) 570, 1697
Bst2UI CCWGG 6 cut(s) 324, 480, 761, 2166, 2842, 3056
Bst6I CTCTTC 3 cut(s) 667, 1419, 1454
BstAPI GCANNNNNTGC 2 cut(s) 1520, 2600
BstAUI TGTACA 1 cut(s) 2032
BstBAI YACGTR 3 cut(s) 17, 341, 2417
BstC8I GCNNGC 8 cut(s) 135, 465, 529, 1198, 1512, 1729, 2627, 2631
BstDEI CTNAG 9 cut(s) 66, 459, 984, 1142, 1587, 2056, 2208, 2367, 3261
BstDSI CCRYGG 1 cut(s) 2391
BstENI CCTNNNNNAGG 3 cut(s) 598, 1515, 2308
BstMAI GTCTC 2 cut(s) 1629, 2107
BstMCI CGRYCG 1 cut(s) 1440
BstMWI GCNNNNNNNGC 9 cut(s) 134, 524, 537, 1085, 1520, 2250, 2259, 2600, 2918
BstNI CCWGG 6 cut(s) 324, 480, 761, 2166, 2842, 3056
BstNSI RCATGY 3 cut(s) 239, 1158, 1938
BstPAI GACNNNNGTC 1 cut(s) 1436
BstSCI CCNGG 7 cut(s) 322, 478, 759, 2164, 2840, 2865, 3054
BstSFI CTRYAG 3 cut(s) 903, 1725, 2196
BstSLI GKGCMC 2 cut(s) 85, 3020
BstV1I GCAGC 8 cut(s) 505, 508, 511, 952, 1362, 1372, 1567, 1936
BstV2I GAAGAC 1 cut(s) 217
BstXI CCANNNNNNTGG 1 cut(s) 2933
BsuRI GGCC 6 cut(s) 604, 1539, 2253, 2520, 2788, 2827
BtgI CCRYGG 1 cut(s) 2391
BtrI CACGTC 1 cut(s) 2831
BtsIMutI CAGTG 6 cut(s) 417, 826, 1353, 1941, 2130, 3206
BveI ACCTGC 3 cut(s) 1100, 1246, 2960
Cac8I GCNNGC 8 cut(s) 135, 465, 529, 1198, 1512, 1729, 2627, 2631
Cfr13I GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2875, 2972
CsiI ACCWGGT 1 cut(s) 322
Csp6I GTAC 7 cut(s) 14, 147, 203, 719, 1722, 1743, 2033
CspCI CAANNNNNGTGG 2 cut(s) 2464, 2499
CviQI GTAC 7 cut(s) 14, 147, 203, 719, 1722, 1743, 2033
DdeI CTNAG 9 cut(s) 66, 459, 984, 1142, 1587, 2056, 2208, 2367, 3261
EaeI YGGCCR 1 cut(s) 2518
Eam1104I CTCTTC 3 cut(s) 667, 1419, 1454
EarI CTCTTC 3 cut(s) 667, 1419, 1454
Ecl136II GAGCTC 1 cut(s) 2803
Eco130I CCWWGG 3 cut(s) 86, 606, 2391
Eco147I AGGCCT 2 cut(s) 1539, 2788
Eco24I GRGCYC 2 cut(s) 1382, 2805
Eco31I GGTCTC 1 cut(s) 1629
Eco32I GATATC 1 cut(s) 663
Eco47I GGWCC 5 cut(s) 113, 265, 1685, 2875, 2972
Eco53kI GAGCTC 1 cut(s) 2803
Eco57I CTGAAG 5 cut(s) 330, 393, 1443, 2106, 2196
EcoICRI GAGCTC 1 cut(s) 2803
EcoNI CCTNNNNNAGG 3 cut(s) 598, 1515, 2308
EcoO109I RGGNCCY 3 cut(s) 603, 2875, 2972
EcoRII CCWGG 6 cut(s) 322, 478, 759, 2164, 2840, 3054
EcoRV GATATC 1 cut(s) 663
EcoT14I CCWWGG 3 cut(s) 86, 606, 2391
EcoT22I ATGCAT 2 cut(s) 589, 1156
EcoT38I GRGCYC 2 cut(s) 1382, 2805
ErhI CCWWGG 3 cut(s) 86, 606, 2391
FalI AAGNNNNNCTT 2 cut(s) 664, 696
FaqI GGGAC 3 cut(s) 592, 1671, 2958
FauI CCCGC 3 cut(s) 568, 1994, 2766
FblI GTMKAC 1 cut(s) 906
FriOI GRGCYC 2 cut(s) 1382, 2805
FspBI CTAG 8 cut(s) 417, 1091, 1628, 1673, 2013, 2457, 2526, 2906
GsaI CCCAGC 1 cut(s) 1623
GsuI CTGGAG 1 cut(s) 3152
HaeIII GGCC 6 cut(s) 604, 1539, 2253, 2520, 2788, 2827
HapII CCGG 2 cut(s) 1004, 2867
HincII GTYRAC 1 cut(s) 1765
HindII GTYRAC 1 cut(s) 1765
HindIII AAGCTT 2 cut(s) 188, 2178
HpaII CCGG 2 cut(s) 1004, 2867
Hpy166II GTNNAC 5 cut(s) 83, 907, 1180, 1765, 2611
Hpy8I GTNNAC 5 cut(s) 83, 907, 1180, 1765, 2611
Hpy99I CGWCG 3 cut(s) 2484, 2835, 3083
HpyAV CCTTC 6 cut(s) 52, 87, 662, 1322, 1529, 3161
HpyCH4IV ACGT 7 cut(s) 16, 340, 1912, 2416, 2479, 2830, 3078
HpyF10VI GCNNNNNNNGC 9 cut(s) 134, 524, 537, 1085, 1520, 2250, 2259, 2600, 2918
HpyF3I CTNAG 9 cut(s) 66, 459, 984, 1142, 1587, 2056, 2208, 2367, 3261
HpySE526I ACGT 7 cut(s) 16, 340, 1912, 2416, 2479, 2830, 3078
LmnI GCTCC 4 cut(s) 130, 862, 2201, 3040
Lsp1109I GCAGC 8 cut(s) 505, 508, 511, 952, 1362, 1372, 1567, 1936
MabI ACCWGGT 1 cut(s) 322
MaeI CTAG 8 cut(s) 417, 1091, 1628, 1673, 2013, 2457, 2526, 2906
MaeII ACGT 7 cut(s) 16, 340, 1912, 2416, 2479, 2830, 3078
MbiI CCGCTC 1 cut(s) 575
MfeI CAATTG 2 cut(s) 372, 2159
MhlI GDGCHC 4 cut(s) 85, 1382, 2805, 3020
MlyI GAGTC 2 cut(s) 1040, 2734
MmeI TCCRAC 3 cut(s) 35, 1807, 3201
Mph1103I ATGCAT 2 cut(s) 589, 1156
MroXI GAANNNNTTC 3 cut(s) 693, 999, 2746
MseI TTAA 8 cut(s) 246, 444, 455, 765, 1506, 1556, 2022, 2256
MslI CAYNNNNRTG 6 cut(s) 1713, 1776, 2024, 2235, 2616, 2931
MspA1I CMGCKG 1 cut(s) 1436
MspI CCGG 2 cut(s) 1004, 2867
MspR9I CCNGG 7 cut(s) 324, 480, 761, 2166, 2842, 2867, 3056
MunI CAATTG 2 cut(s) 372, 2159
Mva1269I GAATGC 1 cut(s) 1985
MvaI CCWGG 6 cut(s) 324, 480, 761, 2166, 2842, 3056
MwoI GCNNNNNNNGC 9 cut(s) 134, 524, 537, 1085, 1520, 2250, 2259, 2600, 2918
NciI CCSGG 1 cut(s) 2867
NcoI CCATGG 1 cut(s) 2391
NlaIV GGNNCC 8 cut(s) 132, 864, 973, 1668, 1687, 2506, 2568, 2974
NmuCI GTSAC 7 cut(s) 276, 412, 1262, 1448, 1549, 1694, 1769
NsiI ATGCAT 2 cut(s) 589, 1156
NspI RCATGY 3 cut(s) 239, 1158, 1938
OliI CACNNNNGTG 2 cut(s) 1713, 2616
PaqCI CACCTGC 2 cut(s) 1100, 1246
PceI AGGCCT 2 cut(s) 1539, 2788
PctI GAATGC 1 cut(s) 1985
PdmI GAANNNNTTC 3 cut(s) 693, 999, 2746
PflMI CCANNNNNTGG 1 cut(s) 2537
PleI GAGTC 2 cut(s) 1040, 2733
PpsI GAGTC 2 cut(s) 1040, 2733
Ppu21I YACGTR 3 cut(s) 17, 341, 2417
PpuMI RGGWCCY 2 cut(s) 2875, 2972
PshAI GACNNNNGTC 1 cut(s) 1436
PsiI TTATAA 2 cut(s) 2643, 2820
Psp124BI GAGCTC 1 cut(s) 2805
Psp5II RGGWCCY 2 cut(s) 2875, 2972
Psp6I CCWGG 6 cut(s) 322, 478, 759, 2164, 2840, 3054
PspFI CCCAGC 1 cut(s) 1619
PspGI CCWGG 6 cut(s) 322, 478, 759, 2164, 2840, 3054
PspN4I GGNNCC 8 cut(s) 132, 864, 973, 1668, 1687, 2506, 2568, 2974
PspPI GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2875, 2972
PspPPI RGGWCCY 2 cut(s) 2875, 2972
PsrI GAACNNNNNNTAC 2 cut(s) 139, 171
PstI CTGCAG 2 cut(s) 1729, 2200
RsaI GTAC 7 cut(s) 15, 148, 204, 720, 1723, 1744, 2034
RsaNI GTAC 7 cut(s) 14, 147, 203, 719, 1722, 1743, 2033
RseI CAYNNNNRTG 6 cut(s) 1713, 1776, 2024, 2235, 2616, 2931
SacI GAGCTC 1 cut(s) 2805
SaqAI TTAA 8 cut(s) 246, 444, 455, 765, 1506, 1556, 2022, 2256
Sau96I GGNCC 7 cut(s) 113, 265, 603, 1685, 2825, 2875, 2972
ScaI AGTACT 1 cut(s) 148
SchI GAGTC 2 cut(s) 1040, 2734
ScrFI CCNGG 7 cut(s) 324, 480, 761, 2166, 2842, 2867, 3056
SduI GDGCHC 4 cut(s) 85, 1382, 2805, 3020
SexAI ACCWGGT 1 cut(s) 322
SfcI CTRYAG 3 cut(s) 903, 1725, 2196
SinI GGWCC 5 cut(s) 113, 265, 1685, 2875, 2972
SmiMI CAYNNNNRTG 6 cut(s) 1713, 1776, 2024, 2235, 2616, 2931
SmlI CTYRAG 1 cut(s) 891
SmoI CTYRAG 1 cut(s) 891
SpeI ACTAGT 1 cut(s) 416
SseBI AGGCCT 2 cut(s) 1539, 2788
SsiI CCGC 7 cut(s) 128, 575, 1436, 2001, 2521, 2591, 2773
SspI AATATT 1 cut(s) 1192
SspMI CTAG 8 cut(s) 417, 1091, 1628, 1673, 2013, 2457, 2526, 2906
SstI GAGCTC 1 cut(s) 2805
StuI AGGCCT 2 cut(s) 1539, 2788
StyD4I CCNGG 7 cut(s) 322, 478, 759, 2164, 2840, 2865, 3054
StyI CCWWGG 3 cut(s) 86, 606, 2391
TaiI ACGT 7 cut(s) 19, 343, 1915, 2419, 2482, 2833, 3081
TaqI TCGA 3 cut(s) 1293, 1440, 2544
TatI WGTACW 5 cut(s) 146, 202, 718, 1742, 2032
TauI GCSGC 2 cut(s) 2523, 2594
Tru1I TTAA 8 cut(s) 246, 444, 455, 765, 1506, 1556, 2022, 2256
Tru9I TTAA 8 cut(s) 246, 444, 455, 765, 1506, 1556, 2022, 2256
TscAI CASTG 6 cut(s) 417, 833, 1360, 1948, 2130, 3206
TseFI GTSAC 7 cut(s) 276, 412, 1262, 1448, 1549, 1694, 1769
TseI GCWGC 8 cut(s) 518, 521, 524, 940, 1350, 1385, 1580, 1949
Tsp45I GTSAC 7 cut(s) 276, 412, 1262, 1448, 1549, 1694, 1769
TspGWI ACGGA 6 cut(s) 257, 264, 964, 1829, 2955, 3238
TspRI CASTG 6 cut(s) 417, 833, 1360, 1948, 2130, 3206
Van91I CCANNNNNTGG 1 cut(s) 2537
VneI GTGCAC 1 cut(s) 81
VpaK11BI GGWCC 5 cut(s) 113, 265, 1685, 2875, 2972
XagI CCTNNNNNAGG 3 cut(s) 598, 1515, 2308
XapI RAATTY 3 cut(s) 31, 1895, 1994
XbaI TCTAGA 2 cut(s) 1627, 2905
XceI RCATGY 3 cut(s) 239, 1158, 1938
XcmI CCANNNNNNNNNTGG 2 cut(s) 51, 1715
XmiI GTMKAC 1 cut(s) 906
XmnI GAANNNNTTC 3 cut(s) 693, 999, 2746
XspI CTAG 8 cut(s) 417, 1091, 1628, 1673, 2013, 2457, 2526, 2906
ZrmI AGTACT 1 cut(s) 148
Zsp2I ATGCAT 2 cut(s) 589, 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.