Rw1G037370

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0001112
Physical Location & Seq
Forward (+)
65063115 .. 65069085
5971 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G037370.1

Sequence Viewer

Length: 3366 bp
ATGGGTGCGGAGCCAGCAAATAAAAGTACTAAAAGTTCATCTGAAACAACTGTTTCTGAATCAGAGAAGCTTGGAGTGGCTGTACTTGGAAGACGGTTCAGCGACAAAATTGAACATGTGCCGATTAAGAAAAGAAGATTTATGGTCCGTTCTCCGTCACCACCCCCTCGCTTATCTTCTCAGTTACCTGAAAACAATCAACCAGGTGTGGGTGATCTACGTGCTTCAGGTCAGAAGTCATGTTCTAAATCAATTGCCAAAAAGCATACAACAAGGAGTGATACTTCTTCGGTGACTAGTTTTACTCATAGTGCTGTTACTGTTAACGAGAGTTTAACTGAGCCGGCAAATGAAAAGCCTGGTTATGGGGAGGACTTCTCTGGTATTGAGATATTGGCTGCTGCTGCCTGCAACAACAGCATACATGATGATATAGGTGAAGAATTATCACGAGAAGGGACGAATGCATCAACCTCTGCGAGGCCCTTGGCGAAAACTGTTGCATCCTTTTCATCAACGCCAATGATAACTGATTCAGAGATATCAGAAGGAAGAGATGCATCATTGGAAACAATTCATTATTCGCCTAAAGATGTAGTACATGAAGATAAAATAGAGAACTCCTTTGTTGAGGATAGCTTGGTTAAAACTAATACTGGTGACGGAGATGACCAAGCAGTAGCATCTTCAAAGGATGTTAGGTTGCACTGGGATCTAAATGTTTGTATGGATGCTTGGGAGGAGCCTTGTGATACGGTGATGGTTGATCCTCAAGCAAATGCTGTAGACGACATCTGTATTGACAGACAGAGCGAAAAGCAGCCAGTTTCACAAGATGGTGATGCACAGGGATCCGTAGAAGCTAAGAATCCTGAAATGCTTCCTGTGGTTGATGATGTGGAACAGGGATTGAAAGCATCCCCGGACTCTGAAATAAGTTATGGTAAAAGTGGCCTGGCTGATAATGCTCTAGGATCTTCAAAAGATGCAGGTGTGGTTACAGACAATTGCAATCAGGATGTCAGCATGGATGCATGTGGTGATAATTCCTCCTGTGTTCGCTTTGACAATATTGCAGGCACACCTACTGTGCCTTTAGAAAAGAATGGAACACCACCTGCCAGTATTGGTGCACAACTGGGTGACACTAACTGTTCAGGAAAGATCCAGCTCGAAAACCCTGCTATAACTTGTGTGCCTGTTGTGGAAGGGGTTTCTTGTGAGATGGGCAGCACTGTTGTAGATGATGATGGTAAGGGCTCTGCTGCAACATCCAGCTTCCATGATGATCCAAAATCTCCTGAAGAGATGACAGCGGTCGAGAGCTGTCACTTACAGAAGAGTTGTCCAGAGGTCAAGCCTGTATGCAAAACAGAAGATGTGATTAAGCCTGCATCAGGTGCATCTGTTGGTGAAGGCCTCTCTTTGGTGACTTTAATTGTAAAGGATCAGGTTGAAGCTGCATCTCAGATTCATACTGTTAATTCTCTACAAAATGCTGGGTCTCTAGAAGTAATGCCTAAATCTTCTGTGAGTGCCACAAAGGATCCACCAGCTGATGCTGGTCCCTCCTGTCACGAGCAATGCCACTATGGTGATGGTACTGCAGGAAGTAAAGTCACTACAGTAGATTCTTCTGGTGTCAACAGTCACTTGGATGATAAGGATCACATGGTTGCCAACAACAACCCTACGGAACAGGAGGTCGGATATGATTCTCAATATGAGGACGGGGAGTTGAGGGAATCAGATGTACCTTATTGGGAGGAGAATGAATTTGACGAAGTTGAACGTGTTGATTATGGTTCTGATACATGTGACACTGATGCTGCTGATGGCTCTGTATCAGGAAAAGTGGAATGCAGTGAATTTTGCGGGGTAGAATCTAGGAACATTAACATGAACGTACAGGTTGTGCGAGGATTGAGCCTAGGTTCTGATAATATGTGTGGAAAAGTTGAACATAGTACCACTGGAAATGCTTTGAGACAATCTTCAGTGGGTTCAAAGACGAGAACTTCTGGATCTGAACAATTGCCCGGTGATTCTGAAGCTTCTTCAAACAGAACTGCAGGAGCAACTGAGGGTTGCACAATAAGAAAACATACTGGTGATTGCTTTGATGGCCTTAATGGTAAAGATCCTGCCAAAGTGGATGGATCAATGACATCTGATACCTTGAATAGGATGGGAACTTCATCTGGGAGGAGGTATGACTCTTTTGATTTCTCCACTCACTCTGAGGAGGTCGGTTCTGATTATTCCATGGGAAAGGAAAGATCTGATTCACGCATGCTTGGTAAGAGTTTGGGAGGTGTTCGTTTTGCTTCTAGGAGTTATTGGGATTCCAAACGTCGTGGATCACCATCTTATCGTGGTTCCTTTGGTTCTAGCCGCCCTAGACCAAGAAGTGGTATCGAGAGTGATGAATATACAATGGATCCAGATGATACATTTTCAGAAGCGGCAGAGGTTGCAGGAGTTCACAATCGTGTTCGCAGACAAGCTATGAGTTATAATTCAAATCGTTCTTATCAGCCCACATTTAGAAGAAGATCCCCAGATACACATAGGGGGATGATACCTATGAGGGATATAAGTCCTGATAGGAGGAGAAGATATCCACAAGGGGTTGGTAGAGGTATGCGGGATTACCACAGGCCTATTCCCAACGAGCTCAATGACAGTTCTTATGATGGGCCACGTCGTATGACCAGGAGAGAACCAAGCGCATCTCCCCCTGGCAGAGGACCTTATTATGGTAGACCCAAGTTCCAGTCTAGAGGCAGAAGTCGATCTCCTCTTGCATGGGAACGGAATGAAGTTTCAAGACATCGTGGTAGCAGGTCCCCTGATTATAGATTTGATGGTAAAATGGAGAGGGGGAGAGTGCCCTTTCAGAAGAACAGTTTTGGAGCAAAGTATGAAGCAGGGTTCTTTTCCCCACCAAAACGTCGGTTTTCCCCACAACACAATTCAAGATGGTTTGATGATCGCAATGGTGCTGGAGATCATAATTTCAGAGGCAGGAGAGGAGGTGGAAGGAGATTCCAACCGAGCCAAAGGTTTGATTCAGTGCGTTCTCGGAGAGTGGATTCAGATGATTATTTTGAACCCATTGTTCGTCCAAGATTCTCAGAGTTGAACAGTGGTGGTAGGGAATGTAGATTTGAGGGCAGTGATGAAGATAGAAGGAAGCCTGAAGGAAGATTTCAAATTGTTCATCGTGTGCGGCGTTATGATTCTGAAGGTGTTGTGCGTCAGTTCCGTTACGATGAAGAAGATCGGTTTGCATCCCGCAATACACAGAACTTTGATGACTGTGATATAGGGGCGCTGATCGACGGCCTCGAGATGTTTACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1121

Amino Acids

122.64

Weight (kDa)

5.3

Isoelectric Point (pI)

60.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2517
AarI CACCTGC 2 cut(s) 980, 1126
Acc36I ACCTGC 3 cut(s) 980, 1126, 2835
AccB7I CCANNNNNTGG 1 cut(s) 2411
AccI GTMKAC 2 cut(s) 786, 2764
AciI CCGC 8 cut(s) 8, 1316, 1875, 2395, 2465, 2647, 3232, 3298
AcsI RAATTY 2 cut(s) 1775, 1868
AcuI CTGAAG 6 cut(s) 210, 1323, 1980, 2070, 3222, 3267
AfaI GTAC 7 cut(s) 28, 84, 600, 1603, 1755, 1908, 1969
AfiI CCNNNNNNNGG 9 cut(s) 209, 365, 480, 1397, 1426, 2184, 2411, 2747, 2759
AflIII ACRYGT 3 cut(s) 115, 1792, 1814
AhlI ACTAGT 1 cut(s) 296
AjiI CACGTC 1 cut(s) 2705
AjnI CCWGG 5 cut(s) 202, 358, 954, 2714, 2740
AleI CACNNNNGTG 2 cut(s) 1593, 2490
Alw21I GWGCWC 2 cut(s) 1135, 2679
Alw26I GTCTC 2 cut(s) 1509, 1981
Alw44I GTGCAC 1 cut(s) 1131
Ama87I CYCGRG 1 cut(s) 3350
AoxI GGCC 7 cut(s) 482, 952, 1417, 2125, 2660, 2699, 3346
ApaLI GTGCAC 1 cut(s) 1131
ApeKI GCWGC 8 cut(s) 398, 401, 404, 820, 1230, 1265, 1460, 1829
ApoI RAATTY 2 cut(s) 1775, 1868
Asp700I GAANNNNTTC 2 cut(s) 573, 879
AspA2I CCTAGG 1 cut(s) 1930
AspLEI GCGC 2 cut(s) 2732, 3337
AspS9I GGNCC 6 cut(s) 145, 483, 1565, 2699, 2750, 2847
AsuC2I CCSGG 2 cut(s) 923, 2040
AvaI CYCGRG 1 cut(s) 3350
AvaII GGWCC 4 cut(s) 145, 1565, 2750, 2847
AvrII CCTAGG 1 cut(s) 1930
BaeGI GKGCMC 2 cut(s) 1135, 2895
BamHI GGATCC 3 cut(s) 851, 1546, 2440
BanII GRGCYC 2 cut(s) 1262, 2679
BauI CACGAG 2 cut(s) 450, 1577
BbsI GAAGAC 1 cut(s) 97
Bbv12I GWGCWC 2 cut(s) 1135, 2679
BbvI GCAGC 8 cut(s) 385, 388, 391, 832, 1242, 1252, 1447, 1816
BceAI ACGGC 1 cut(s) 3361
BcgI CGANNNNNNTGC 2 cut(s) 1163, 1197
BciT130I CCWGG 5 cut(s) 204, 360, 956, 2716, 2742
BcnI CCSGG 2 cut(s) 923, 2040
BcoDI GTCTC 2 cut(s) 1509, 1981
BcuI ACTAGT 1 cut(s) 296
BfmI CTRYAG 4 cut(s) 783, 1605, 1623, 2070
BfoI RGCGCY 1 cut(s) 3338
BfuAI ACCTGC 3 cut(s) 980, 1126, 2835
BglII AGATCT 1 cut(s) 2279
BlnI CCTAGG 1 cut(s) 1930
BmcAI AGTACT 1 cut(s) 28
Bme1390I CCNGG 7 cut(s) 204, 360, 923, 956, 2040, 2716, 2742
Bme18I GGWCC 4 cut(s) 145, 1565, 2750, 2847
BmeT110I CYCGRG 1 cut(s) 3350
BmgBI CACGTC 1 cut(s) 2705
BmgT120I GGNCC 6 cut(s) 145, 483, 1565, 2699, 2750, 2847
BmiI GGNNCC 8 cut(s) 12, 744, 853, 1548, 1567, 2380, 2442, 2849
BmrFI CCNGG 7 cut(s) 204, 360, 923, 956, 2040, 2716, 2742
BmrI ACTGGG 2 cut(s) 718, 1148
BmuI ACTGGG 2 cut(s) 718, 1148
BoxI GACNNNNGTC 1 cut(s) 1316
BpiI GAAGAC 1 cut(s) 97
BplI GAGNNNNNCTC 2 cut(s) 362, 394
BpmI CTGGAG 1 cut(s) 3027
BpuEI CTTGAG 1 cut(s) 756
BpuMI CCSGG 2 cut(s) 923, 2040
BsaAI YACGTR 1 cut(s) 221
BsaBI GATNNNNATC 2 cut(s) 1665, 2365
BsaI GGTCTC 1 cut(s) 1509
BsaJI CCNNGG 5 cut(s) 486, 921, 1930, 2265, 2740
BsaXI ACNNNNNCTCC 4 cut(s) 66, 96, 3022, 3052
Bsc4I CCNNNNNNNGG 9 cut(s) 209, 365, 480, 1397, 1426, 2184, 2411, 2747, 2759
Bse118I RCCGGY 1 cut(s) 343
Bse1I ACTGG 8 cut(s) 661, 713, 824, 1122, 1143, 1978, 2113, 2776
Bse3DI GCAATG 2 cut(s) 1589, 3004
Bse8I GATNNNNATC 2 cut(s) 1665, 2365
BseBI CCWGG 5 cut(s) 204, 360, 956, 2716, 2742
BseDI CCNNGG 5 cut(s) 486, 921, 1930, 2265, 2740
BseJI GATNNNNATC 2 cut(s) 1665, 2365
BseLI CCNNNNNNNGG 9 cut(s) 209, 365, 480, 1397, 1426, 2184, 2411, 2747, 2759
BseMI GCAATG 2 cut(s) 1589, 3004
BseMII CTCAG 6 cut(s) 194, 330, 1481, 2073, 2232, 3150
BseNI ACTGG 8 cut(s) 661, 713, 824, 1122, 1143, 1978, 2113, 2776
BseRI GAGGAG 7 cut(s) 755, 1781, 2221, 2258, 2626, 2790, 3048
BseSI GKGCMC 2 cut(s) 1135, 2895
BseXI GCAGC 8 cut(s) 385, 388, 391, 832, 1242, 1252, 1447, 1816
BseYI CCCAGC 1 cut(s) 1499
Bsh1285I CGRYCG 1 cut(s) 1320
BshFI GGCC 7 cut(s) 484, 954, 1419, 2127, 2662, 2701, 3348
BsiEI CGRYCG 1 cut(s) 1320
BsiHKAI GWGCWC 2 cut(s) 1135, 2679
BsiHKCI CYCGRG 1 cut(s) 3350
BsiSI CCGG 3 cut(s) 344, 923, 2040
BslFI GGGAC 3 cut(s) 472, 1551, 2833
BslI CCNNNNNNNGG 9 cut(s) 209, 365, 480, 1397, 1426, 2184, 2411, 2747, 2759
BsmAI GTCTC 2 cut(s) 1509, 1981
BsmFI GGGAC 3 cut(s) 472, 1551, 2833
BsmI GAATGC 2 cut(s) 469, 1865
BsnI GGCC 7 cut(s) 484, 954, 1419, 2127, 2662, 2701, 3348
Bso31I GGTCTC 1 cut(s) 1509
BsoBI CYCGRG 1 cut(s) 3350
Bsp1286I GDGCHC 4 cut(s) 1135, 1262, 2679, 2895
Bsp19I CCATGG 1 cut(s) 2265
BspACI CCGC 8 cut(s) 8, 1316, 1875, 2395, 2465, 2647, 3232, 3298
BspANI GGCC 7 cut(s) 484, 954, 1419, 2127, 2662, 2701, 3348
BspCNI CTCAG 6 cut(s) 193, 331, 1480, 2074, 2233, 3149
BspLI GGNNCC 8 cut(s) 12, 744, 853, 1548, 1567, 2380, 2442, 2849
BspMAI CTGCAG 2 cut(s) 1609, 2074
BspMI ACCTGC 3 cut(s) 980, 1126, 2835
BspTNI GGTCTC 1 cut(s) 1509
BsrDI GCAATG 2 cut(s) 1589, 3004
BsrFI RCCGGY 1 cut(s) 343
BsrI ACTGG 8 cut(s) 661, 713, 824, 1122, 1143, 1978, 2113, 2776
BssAI RCCGGY 1 cut(s) 343
BssECI CCNNGG 5 cut(s) 486, 921, 1930, 2265, 2740
BssSI CACGAG 2 cut(s) 450, 1577
BssT1I CCWWGG 3 cut(s) 486, 1930, 2265
Bst2BI CACGAG 2 cut(s) 450, 1577
Bst2UI CCWGG 5 cut(s) 204, 360, 956, 2716, 2742
Bst6I CTCTTC 3 cut(s) 547, 1299, 1334
BstAPI GCANNNNNTGC 2 cut(s) 1400, 2474
BstBAI YACGTR 1 cut(s) 221
BstC8I GCNNGC 6 cut(s) 15, 345, 409, 1078, 1392, 2294
BstDEI CTNAG 7 cut(s) 180, 339, 864, 1467, 2082, 2241, 3136
BstDSI CCRYGG 1 cut(s) 2265
BstENI CCTNNNNNAGG 4 cut(s) 478, 1395, 2182, 2745
BstH2I RGCGCY 1 cut(s) 3338
BstHHI GCGC 2 cut(s) 2732, 3337
BstMAI GTCTC 2 cut(s) 1509, 1981
BstMCI CGRYCG 1 cut(s) 1320
BstMWI GCNNNNNNNGC 7 cut(s) 14, 404, 417, 965, 1400, 2124, 2474
BstNI CCWGG 5 cut(s) 204, 360, 956, 2716, 2742
BstNSI RCATGY 4 cut(s) 119, 1038, 1818, 2296
BstPAI GACNNNNGTC 1 cut(s) 1316
BstSCI CCNGG 7 cut(s) 202, 358, 921, 954, 2038, 2714, 2740
BstSFI CTRYAG 4 cut(s) 783, 1605, 1623, 2070
BstSLI GKGCMC 2 cut(s) 1135, 2895
BstV1I GCAGC 8 cut(s) 385, 388, 391, 832, 1242, 1252, 1447, 1816
BstV2I GAAGAC 1 cut(s) 97
BsuRI GGCC 7 cut(s) 484, 954, 1419, 2127, 2662, 2701, 3348
BtgI CCRYGG 1 cut(s) 2265
BtrI CACGTC 1 cut(s) 2705
BtsI GCAGTG 2 cut(s) 1870, 3184
BtsIMutI CAGTG 9 cut(s) 706, 1233, 1821, 1870, 1971, 2004, 3081, 3154, 3184
BveI ACCTGC 3 cut(s) 980, 1126, 2835
Cac8I GCNNGC 6 cut(s) 15, 345, 409, 1078, 1392, 2294
CfoI GCGC 2 cut(s) 2732, 3337
Cfr10I RCCGGY 1 cut(s) 343
Cfr13I GGNCC 6 cut(s) 145, 483, 1565, 2699, 2750, 2847
CseI GACGC 1 cut(s) 3248
CsiI ACCWGGT 1 cut(s) 202
Csp6I GTAC 7 cut(s) 27, 83, 599, 1602, 1754, 1907, 1968
CspCI CAANNNNNGTGG 2 cut(s) 2338, 2373
CviQI GTAC 7 cut(s) 27, 83, 599, 1602, 1754, 1907, 1968
DdeI CTNAG 7 cut(s) 180, 339, 864, 1467, 2082, 2241, 3136
Eam1104I CTCTTC 3 cut(s) 547, 1299, 1334
EarI CTCTTC 3 cut(s) 547, 1299, 1334
Ecl136II GAGCTC 1 cut(s) 2677
Eco130I CCWWGG 3 cut(s) 486, 1930, 2265
Eco147I AGGCCT 2 cut(s) 1419, 2662
Eco24I GRGCYC 2 cut(s) 1262, 2679
Eco31I GGTCTC 1 cut(s) 1509
Eco32I GATATC 2 cut(s) 543, 2621
Eco47I GGWCC 4 cut(s) 145, 1565, 2750, 2847
Eco53kI GAGCTC 1 cut(s) 2677
Eco57I CTGAAG 6 cut(s) 210, 1323, 1980, 2070, 3222, 3267
Eco88I CYCGRG 1 cut(s) 3350
EcoICRI GAGCTC 1 cut(s) 2677
EcoNI CCTNNNNNAGG 4 cut(s) 478, 1395, 2182, 2745
EcoO109I RGGNCCY 3 cut(s) 483, 2750, 2847
EcoRII CCWGG 5 cut(s) 202, 358, 954, 2714, 2740
EcoRV GATATC 2 cut(s) 543, 2621
EcoT14I CCWWGG 3 cut(s) 486, 1930, 2265
EcoT22I ATGCAT 3 cut(s) 469, 562, 1036
EcoT38I GRGCYC 2 cut(s) 1262, 2679
ErhI CCWWGG 3 cut(s) 486, 1930, 2265
FaqI GGGAC 3 cut(s) 472, 1551, 2833
FauI CCCGC 3 cut(s) 1868, 2640, 3305
FblI GTMKAC 2 cut(s) 786, 2764
FriOI GRGCYC 2 cut(s) 1262, 2679
GlaI GCGC 2 cut(s) 2731, 3336
GsaI CCCAGC 1 cut(s) 1503
GsuI CTGGAG 1 cut(s) 3027
HaeII RGCGCY 1 cut(s) 3338
HaeIII GGCC 7 cut(s) 484, 954, 1419, 2127, 2662, 2701, 3348
HapII CCGG 3 cut(s) 344, 923, 2040
HgaI GACGC 1 cut(s) 3248
HhaI GCGC 2 cut(s) 2732, 3337
Hin6I GCGC 2 cut(s) 2730, 3335
HinP1I GCGC 2 cut(s) 2730, 3335
HincII GTYRAC 2 cut(s) 325, 1645
HindII GTYRAC 2 cut(s) 325, 1645
HindIII AAGCTT 2 cut(s) 68, 2052
HpaI GTTAAC 1 cut(s) 325
HpaII CCGG 3 cut(s) 344, 923, 2040
Hpy166II GTNNAC 7 cut(s) 325, 787, 1133, 1645, 2485, 2765, 3360
Hpy8I GTNNAC 7 cut(s) 325, 787, 1133, 1645, 2485, 2765, 3360
Hpy99I CGWCG 4 cut(s) 2358, 2709, 2958, 3347
HpyAV CCTTC 8 cut(s) 449, 542, 1202, 1409, 3036, 3186, 3197, 3242
HpyCH4IV ACGT 6 cut(s) 220, 1792, 1905, 2353, 2704, 2953
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 404, 417, 965, 1400, 2124, 2474
HpyF3I CTNAG 7 cut(s) 180, 339, 864, 1467, 2082, 2241, 3136
HpySE526I ACGT 6 cut(s) 220, 1792, 1905, 2353, 2704, 2953
HspAI GCGC 2 cut(s) 2730, 3335
KroI GCCGGC 1 cut(s) 343
KroNI GCCGGC 1 cut(s) 345
KspAI GTTAAC 1 cut(s) 325
LmnI GCTCC 4 cut(s) 10, 742, 2075, 2915
Lsp1109I GCAGC 8 cut(s) 385, 388, 391, 832, 1242, 1252, 1447, 1816
MabI ACCWGGT 1 cut(s) 202
MaeII ACGT 6 cut(s) 220, 1792, 1905, 2353, 2704, 2953
MfeI CAATTG 3 cut(s) 252, 1006, 2033
MhlI GDGCHC 4 cut(s) 1135, 1262, 2679, 2895
MlyI GAGTC 2 cut(s) 920, 2210
MmeI TCCRAC 2 cut(s) 1687, 3076
Mph1103I ATGCAT 3 cut(s) 469, 562, 1036
MroNI GCCGGC 1 cut(s) 343
MroXI GAANNNNTTC 2 cut(s) 573, 879
MseI TTAA 9 cut(s) 126, 324, 335, 645, 1386, 1436, 1482, 1896, 2130
MslI CAYNNNNRTG 5 cut(s) 1593, 1656, 1898, 2109, 2490
MspA1I CMGCKG 2 cut(s) 1316, 1556
MspI CCGG 3 cut(s) 344, 923, 2040
MspR9I CCNGG 7 cut(s) 204, 360, 923, 956, 2040, 2716, 2742
MunI CAATTG 3 cut(s) 252, 1006, 2033
Mva1269I GAATGC 2 cut(s) 469, 1865
MvaI CCWGG 5 cut(s) 204, 360, 956, 2716, 2742
MwoI GCNNNNNNNGC 7 cut(s) 14, 404, 417, 965, 1400, 2124, 2474
NaeI GCCGGC 1 cut(s) 345
NciI CCSGG 2 cut(s) 923, 2040
NcoI CCATGG 1 cut(s) 2265
NgoMIV GCCGGC 1 cut(s) 343
NlaIV GGNNCC 8 cut(s) 12, 744, 853, 1548, 1567, 2380, 2442, 2849
NsiI ATGCAT 3 cut(s) 469, 562, 1036
NspI RCATGY 4 cut(s) 119, 1038, 1818, 2296
OliI CACNNNNGTG 2 cut(s) 1593, 2490
PaeI GCATGC 1 cut(s) 2296
PaeR7I CTCGAG 1 cut(s) 3350
PaqCI CACCTGC 2 cut(s) 980, 1126
PceI AGGCCT 2 cut(s) 1419, 2662
PciI ACATGT 2 cut(s) 115, 1814
PcsI WCGNNNNNNNCGW 2 cut(s) 3232, 3348
PctI GAATGC 2 cut(s) 469, 1865
PdiI GCCGGC 1 cut(s) 345
PdmI GAANNNNTTC 2 cut(s) 573, 879
PflMI CCANNNNNTGG 1 cut(s) 2411
PleI GAGTC 2 cut(s) 920, 2210
PpsI GAGTC 2 cut(s) 920, 2210
Ppu21I YACGTR 1 cut(s) 221
PpuMI RGGWCCY 2 cut(s) 2750, 2847
PscI ACATGT 2 cut(s) 115, 1814
PshAI GACNNNNGTC 1 cut(s) 1316
PsiI TTATAA 1 cut(s) 2517
Psp124BI GAGCTC 1 cut(s) 2679
Psp5II RGGWCCY 2 cut(s) 2750, 2847
Psp6I CCWGG 5 cut(s) 202, 358, 954, 2714, 2740
PspFI CCCAGC 1 cut(s) 1499
PspGI CCWGG 5 cut(s) 202, 358, 954, 2714, 2740
PspN4I GGNNCC 8 cut(s) 12, 744, 853, 1548, 1567, 2380, 2442, 2849
PspPI GGNCC 6 cut(s) 145, 483, 1565, 2699, 2750, 2847
PspPPI RGGWCCY 2 cut(s) 2750, 2847
PsrI GAACNNNNNNTAC 2 cut(s) 19, 51
PstI CTGCAG 2 cut(s) 1609, 2074
PvuII CAGCTG 1 cut(s) 1556
RsaI GTAC 7 cut(s) 28, 84, 600, 1603, 1755, 1908, 1969
RsaNI GTAC 7 cut(s) 27, 83, 599, 1602, 1754, 1907, 1968
RseI CAYNNNNRTG 5 cut(s) 1593, 1656, 1898, 2109, 2490
SacI GAGCTC 1 cut(s) 2679
SaqAI TTAA 9 cut(s) 126, 324, 335, 645, 1386, 1436, 1482, 1896, 2130
Sau96I GGNCC 6 cut(s) 145, 483, 1565, 2699, 2750, 2847
ScaI AGTACT 1 cut(s) 28
SchI GAGTC 2 cut(s) 920, 2210
ScrFI CCNGG 7 cut(s) 204, 360, 923, 956, 2040, 2716, 2742
SduI GDGCHC 4 cut(s) 1135, 1262, 2679, 2895
SexAI ACCWGGT 1 cut(s) 202
SfcI CTRYAG 4 cut(s) 783, 1605, 1623, 2070
Sfr274I CTCGAG 1 cut(s) 3350
SinI GGWCC 4 cut(s) 145, 1565, 2750, 2847
SlaI CTCGAG 1 cut(s) 3350
SmiMI CAYNNNNRTG 5 cut(s) 1593, 1656, 1898, 2109, 2490
SmlI CTYRAG 2 cut(s) 771, 3350
SmoI CTYRAG 2 cut(s) 771, 3350
SpeI ACTAGT 1 cut(s) 296
SphI GCATGC 1 cut(s) 2296
SseBI AGGCCT 2 cut(s) 1419, 2662
SsiI CCGC 8 cut(s) 8, 1316, 1875, 2395, 2465, 2647, 3232, 3298
SspI AATATT 1 cut(s) 1072
SstI GAGCTC 1 cut(s) 2679
StuI AGGCCT 2 cut(s) 1419, 2662
StyD4I CCNGG 7 cut(s) 202, 358, 921, 954, 2038, 2714, 2740
StyI CCWWGG 3 cut(s) 486, 1930, 2265
TaiI ACGT 6 cut(s) 223, 1795, 1908, 2356, 2707, 2956
TaqI TCGA 6 cut(s) 1173, 1320, 2418, 2794, 3342, 3351
TatI WGTACW 3 cut(s) 26, 82, 598
TauI GCSGC 3 cut(s) 2397, 2468, 3235
Tru1I TTAA 9 cut(s) 126, 324, 335, 645, 1386, 1436, 1482, 1896, 2130
Tru9I TTAA 9 cut(s) 126, 324, 335, 645, 1386, 1436, 1482, 1896, 2130
TscAI CASTG 9 cut(s) 713, 1240, 1828, 1870, 1978, 2004, 3081, 3154, 3184
TseI GCWGC 8 cut(s) 398, 401, 404, 820, 1230, 1265, 1460, 1829
TspGWI ACGGA 7 cut(s) 137, 144, 678, 844, 1709, 2830, 3257
TspRI CASTG 9 cut(s) 713, 1240, 1828, 1870, 1978, 2004, 3081, 3154, 3184
Van91I CCANNNNNTGG 1 cut(s) 2411
VneI GTGCAC 1 cut(s) 1131
VpaK11BI GGWCC 4 cut(s) 145, 1565, 2750, 2847
XagI CCTNNNNNAGG 4 cut(s) 478, 1395, 2182, 2745
XapI RAATTY 2 cut(s) 1775, 1868
XbaI TCTAGA 2 cut(s) 1507, 2780
XceI RCATGY 4 cut(s) 119, 1038, 1818, 2296
XcmI CCANNNNNNNNNTGG 1 cut(s) 1595
XhoI CTCGAG 1 cut(s) 3350
XmaJI CCTAGG 1 cut(s) 1930
XmiI GTMKAC 2 cut(s) 786, 2764
XmnI GAANNNNTTC 2 cut(s) 573, 879
ZrmI AGTACT 1 cut(s) 28
Zsp2I ATGCAT 3 cut(s) 469, 562, 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.