RLG00000026472

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0001112
Physical Location & Seq
Reverse (-)
3219437 .. 3224494
5058 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026472

Sequence Viewer

Length: 3828 bp
ATGAGGAGGCTTCCCATCGGCTCTGGATCTCTATGGATCGGAGATTTATCGAGCTCTGAAGTGAGTATTGAATTAGATCTTGAAGAAAGTTCAAAGGCGGCGGCAGTGGATTTGAAGGAGCTTAGTTGGGATTGGGATTTTAGGGATAGAGGGAACCCCATCACGACTCATTTTTGTGCTTGCCCTGGGGGTGTACCCATCAATCTGGCGCGGAGTAGGAAGCAAGCAAGAACAACATCTTGCAAAACTGCTGGTGGCAGGCAAACAGTGGATGGGATTAGATCTATTTCCCAAAGCATGATGAATACAGTACGTGTAGAACTTACAAATTCTATTAGTCCAGATTTGAGTTGGAAGGTTTCTAAGGGTTACAGAAGTGCACCAAGGCGAAGGAAACAGGTTGATAAAGGACCAAAATTGGGTGTGGAGCCTGCAAATAAAAGTACTAAAAGTTCATCTGAAACGACTGTTTCTGAATCAGAGAAGCTTGGTGTGGCTGTACTTGGAAGACGGTTCAGCGACAAAATTGAGCATGTGCCGATTAAGAAACGAAGATTTATGGTCCGTTCTCCGTCACCACCCCCTCGCTCATCTTCTCAGTTACCTGAAAACAGTCAACCAGGTGTGGGTGATCTACGTGCTTCAGGTCAGAAGTCATGTTCTAAATCAATTGCCAAAAAGCATGCAACAAGGAGTGATACTTCTTCAGTGACTAGTTTTACTCATAGTGCTGTTACTGTTAACGAGAGTTTAACTGAGCTGGCAAATGAAAAGCCTGGTTATGGGGAGGACTTCTCTGGTATTGAGATATTGGCTGCTGCTGCCTGTAACAACAGCATACATGATGATATAGGTGAAGAATTATCACGAGAGGGGACAAATGCATCAACCTCTGCGTGGCCCTTGGCGAAAGCTGTTGCATCCTTTTCATCAACGCCAATGATAACTGATTCCGAGATATCAGAAGGAAGAGATGCATCATTGGAAACAATTCATTATTCGCCTAAAGATATAGTACATGAAGATAAAATAGAGAACTCCTTTGTTGAGGATAGCCTGGTTAAAACTAATACTGGTGATGGAGATGACCAAGCAGTAGCATCTTCAAAGGATGTTAGGTTGCACTGGGATCTAAATGTTTGTATGGATGCTTGGGAGGAGCCTTGTGATACGGTGATGGTTGATCCTCAAGCAAATGCTGTAGACAACATCTCTATTGACAGACAAAGCGAAAAGCAGCCAGTTTCACAAGATGGTGATGCACAGGGATCTGTAGAAGCTAAGAATCCTGAACTGCTTCCTGTGGTTGATGATGTGGAACTGGGATTGAAAGCATCCCCCGACTCTGAAATAAGTTATGGTAAAAGTGGCCTGGCTGATAATTCTCTAGAATCTTCAAAAGATGCAGGTGTGGTTACAGACAATTCCAATCAGGACGTCAGCATGGATGCATGTGGTGATAATTCCTCCTGTGTTCGCTTTGACAATATTGCAGGCACACCTACTGTGCCTTTAGAAGAGAATGGAACACCAACTGCCAGTATTGGTGCACAACTGGGTGACACTAACTGTTCAGGAAAGATCCAGCTCGAAAACCCTGCTATAACTTGTGTGCCTGTTGTGGAAGGGGTTTCTTGTGAGATGGGCAGCACTGTTGTAGATGATGATGGTAAGGGCTCTGCTGCAACATCCAGCTTCCATGATGATCCAAAATCTCCTGAAGAGATGACAGCGGTCGAGAGCTGTCACTTACAGAAGAGTTGTCCAGAGGTCAAGCCTGTATGCAAAACAGAAGATGTGATTAAGCCTGCATCAGGTGCATCTGTTGGTGAAGGCCTCTCTTTGGTGACTTTAATTGTAAAGGATCAGGTTGAAGCTGCATCTCAGATTCATTCTGTTAATTCTCTACAAAATGCTGGGTCTCTAGAAGTAATGCCTAAATCTTCTGTGATTGCCACAAAGGATCCACCAGCTGATGCTGGTCCCTCCTGTCACGAGCAATGCCACTATGGTGATGGTACTGCAGGAAGTAAAGTCACTACAGTAGGTTCTTCTGGTGTGAACAGTCACTTGGATGATAAGGATCGCATGGTTGCCAACAACAACCCTACGGAACAGGAGGTCGGATATGATTCTCAATATGAGGACGGGGAGTTGAGGGAATCAGATGTACCTTATTGGGAGGAGAATGAATTTGACGAAGTTGAACGTGTTGATTATGGTTCTGATACATGTGACACTGATGCCGCTGATGGCTCTGTATCAGGAAAAGTGGAATGCAGAGAAACTGAATTTTGTGGGGTAGAATCTAGGAACATTAGCATGAACGTACAGGTTGTGCGAGGATTGAGCCTAGGTTCTGATAATATGTGTGGAAAAGTTGAACATAGTGCGACTGGAAATGCTTTGAGACAATCTTCAGTGGGTTCAAAGACTAGAACTTCTGGATCTGAACAATTGCCGGGTGATTCTGAAGCTTCTTCAAACAGAACTGCAGGAGCAACTGAGGGTTGCACAATAAGGAAACATACTGGTGATTGCTTTGATGGCCTTAATGGCAAAGATCCTGCCAAAGTGGATGGATCAATGATATCTGATACCTTGAATAGGATGGGAACTTCATCTGGGAGGAGGTATGACACTTTTGATTTCTCCACTCACTCTGAGGAGGTCGGTTCTGATTATTCGATGGGAAGGGAAAGATCTGATTCACGTATGCTTGGTAAGAGTTTGGGAGGTGTTCGTTTTGCTTCTAGGAGTTATTGGGATTCCAAACGTCGTGGATCACCACCTTATCGTGGTTCCTTTGGTTCTGGCCGCCCTAGACCAAGAAGTGGTATCGAGAGTGATGAATATGATCCAGATGATACATTTTCAGATGCGGCAGAGGTTGCAGGAGTTCACAATCGTGTTCGCAGACAAGCTATGAGTTATAATTCAAATCGTTCTTATCAGCCCACATTTAGAAGAAGATCCCCAGATACACATAGGGGGCTGATACCTATGAGGGATATAAGTCCTGATAGGAGGAAAAGATATCCACAAGCAGTTGGTAGAGGTATGCGGGATTACCACAGGCCTATTCCCGACGAGCTCAACGACAGTTCTTATAATGGGCCACGTCGTATGACCAGGAGAGAACCAAGCGCATCACCCCCCGGCAGAGGACCTTATTATGGTAGACCCAAGTTCCAGTCTAGAGGCAGAAGTCGCTCTCCTCTTGCATGGGAACGGAATGAAGTTTCAAGACATCGTGGTAGCAGGTCCCCTGATTATAGATTTGATGGTAAAATGGAGAGGGGGAGAGTGCCCTTTCAGAAGAACAGTTTTGGAGCAAAGTATGAAGCAGGGTTCTTTTCCCCACCAAAACGTCGGTTTTCCCCACAACACAATTCAAGATGGTTTGATGATCGCAATGGTGCTGGAGATCATAATTTCAGAGGCAGGAGAGGAGGTGGAAGGAGATTCCAACCGAGCCAAAGGTTTGATTCAGTGCGTTCTCGGAGAGTGGATTCGGATGATTATTTTGAACCCATTGTTCGTCCAAGATTCTCAGAGTTGAACAGTGGTGGTAGGGAATGTAGATTCGAGGGCAGTGATGAAGATAGAAGGAAGCCTGAAGGAAGATTTCAAATTGTTCATCGTGTGCGGCGTTATGATTCTGAAGGTGTTGTGCGTCAGTTCCGTTATGATGAAGAAGATCGGTTTGCATCCCGCAATACACAGAACTTTGATGACTGTGATAATAGGGGCGCTGATCGACGGCCTCGAGATGTTTACCTAGGAGAGCAGCAGCAGATAGAGAACAGAAGGGTAACTAAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1276

Amino Acids

139.93

Weight (kDa)

5.69

Isoelectric Point (pI)

59.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2934, 3111
AarI CACCTGC 1 cut(s) 1397
AatII GACGTC 1 cut(s) 1440
Acc36I ACCTGC 2 cut(s) 1397, 3252
AccB7I CCANNNNNTGG 1 cut(s) 2834
AccI GTMKAC 2 cut(s) 1203, 3181
AccII CGCG 1 cut(s) 211
AcoI YGGCCR 1 cut(s) 2815
AcsI RAATTY 3 cut(s) 328, 2192, 2291
AcuI CTGAAG 8 cut(s) 78, 627, 690, 1740, 2403, 2493, 3639, 3684
AcyI GRCGYC 1 cut(s) 1437
AfaI GTAC 8 cut(s) 195, 312, 445, 501, 1017, 2020, 2172, 2331
AflIII ACRYGT 3 cut(s) 313, 2209, 2231
AhlI ACTAGT 1 cut(s) 713
AjiI CACGTC 1 cut(s) 3122
AjnI CCWGG 6 cut(s) 184, 619, 775, 1056, 1371, 3131
AjuI GAANNNNNNNTTGG 2 cut(s) 2054, 2086
AleI CACNNNNGTG 2 cut(s) 2010, 2907
Alw21I GWGCWC 4 cut(s) 56, 382, 1552, 3096
Alw26I GTCTC 2 cut(s) 1926, 2404
Alw44I GTGCAC 2 cut(s) 378, 1548
Ama87I CYCGRG 1 cut(s) 3768
AoxI GGCC 8 cut(s) 899, 1369, 1834, 2548, 2815, 3077, 3116, 3764
ApaLI GTGCAC 2 cut(s) 378, 1548
ApeKI GCWGC 9 cut(s) 815, 818, 821, 1237, 1647, 1682, 1877, 3790, 3793
ApoI RAATTY 3 cut(s) 328, 2192, 2291
Asp700I GAANNNNTTC 2 cut(s) 990, 1296
AspA2I CCTAGG 2 cut(s) 2353, 3781
AspLEI GCGC 3 cut(s) 211, 3149, 3755
AspS9I GGNCC 7 cut(s) 410, 562, 900, 1982, 3116, 3167, 3264
AsuC2I CCSGG 2 cut(s) 2463, 3159
AvaI CYCGRG 1 cut(s) 3768
AvaII GGWCC 5 cut(s) 410, 562, 1982, 3167, 3264
AvrII CCTAGG 2 cut(s) 2353, 3781
BaeGI GKGCMC 3 cut(s) 382, 1552, 3312
BamHI GGATCC 1 cut(s) 1963
BanII GRGCYC 3 cut(s) 56, 1679, 3096
BauI CACGAG 2 cut(s) 867, 1994
BbsI GAAGAC 1 cut(s) 514
Bbv12I GWGCWC 4 cut(s) 56, 382, 1552, 3096
BbvI GCAGC 9 cut(s) 802, 805, 808, 1249, 1659, 1669, 1864, 3802, 3805
BceAI ACGGC 1 cut(s) 3779
BcgI CGANNNNNNTGC 2 cut(s) 1580, 1614
BciT130I CCWGG 6 cut(s) 186, 621, 777, 1058, 1373, 3133
BcnI CCSGG 2 cut(s) 2463, 3159
BcoDI GTCTC 2 cut(s) 1926, 2404
BcuI ACTAGT 1 cut(s) 713
BfmI CTRYAG 5 cut(s) 1200, 1272, 2022, 2040, 2493
BfoI RGCGCY 1 cut(s) 3756
BfuAI ACCTGC 2 cut(s) 1397, 3252
BglI GCCNNNNNGGC 1 cut(s) 2556
BglII AGATCT 3 cut(s) 76, 281, 2702
BlnI CCTAGG 2 cut(s) 2353, 3781
BmcAI AGTACT 1 cut(s) 445
Bme1390I CCNGG 8 cut(s) 186, 621, 777, 1058, 1373, 2463, 3133, 3159
Bme18I GGWCC 5 cut(s) 410, 562, 1982, 3167, 3264
BmeT110I CYCGRG 1 cut(s) 3768
BmgBI CACGTC 1 cut(s) 3122
BmgT120I GGNCC 7 cut(s) 410, 562, 900, 1982, 3116, 3167, 3264
BmiI GGNNCC 7 cut(s) 155, 429, 1161, 1965, 1984, 2803, 3266
BmrFI CCNGG 8 cut(s) 186, 621, 777, 1058, 1373, 2463, 3133, 3159
BmrI ACTGGG 3 cut(s) 1135, 1331, 1565
BmuI ACTGGG 3 cut(s) 1135, 1331, 1565
BoxI GACNNNNGTC 1 cut(s) 1733
BpiI GAAGAC 1 cut(s) 514
BplI GAGNNNNNCTC 2 cut(s) 779, 811
BpmI CTGGAG 1 cut(s) 3444
BpuEI CTTGAG 1 cut(s) 1173
BpuMI CCSGG 2 cut(s) 2463, 3159
BsaAI YACGTR 3 cut(s) 314, 638, 2714
BsaBI GATNNNNATC 1 cut(s) 2082
BsaHI GRCGYC 1 cut(s) 1437
BsaI GGTCTC 1 cut(s) 1926
BsaJI CCNNGG 7 cut(s) 184, 185, 383, 903, 2353, 3157, 3781
BsaXI ACNNNNNCTCC 2 cut(s) 3439, 3469
Bse1I ACTGG 9 cut(s) 1078, 1130, 1241, 1326, 1539, 1560, 2401, 2536, 3193
Bse3DI GCAATG 2 cut(s) 2006, 3421
Bse8I GATNNNNATC 1 cut(s) 2082
BseBI CCWGG 6 cut(s) 186, 621, 777, 1058, 1373, 3133
BseDI CCNNGG 7 cut(s) 184, 185, 383, 903, 2353, 3157, 3781
BseJI GATNNNNATC 1 cut(s) 2082
BseMI GCAATG 2 cut(s) 2006, 3421
BseMII CTCAG 6 cut(s) 611, 747, 1898, 2496, 2655, 3567
BseNI ACTGG 9 cut(s) 1078, 1130, 1241, 1326, 1539, 1560, 2401, 2536, 3193
BseRI GAGGAG 7 cut(s) 19, 1172, 2198, 2644, 2681, 3207, 3465
BseSI GKGCMC 3 cut(s) 382, 1552, 3312
BseXI GCAGC 9 cut(s) 802, 805, 808, 1249, 1659, 1669, 1864, 3802, 3805
BseYI CCCAGC 1 cut(s) 1916
Bsh1236I CGCG 1 cut(s) 211
Bsh1285I CGRYCG 1 cut(s) 1737
BshFI GGCC 8 cut(s) 901, 1371, 1836, 2550, 2817, 3079, 3118, 3766
BsiEI CGRYCG 1 cut(s) 1737
BsiHKAI GWGCWC 4 cut(s) 56, 382, 1552, 3096
BsiHKCI CYCGRG 1 cut(s) 3768
BsiSI CCGG 2 cut(s) 2462, 3159
BslFI GGGAC 3 cut(s) 889, 1968, 3250
BsmAI GTCTC 2 cut(s) 1926, 2404
BsmFI GGGAC 3 cut(s) 889, 1968, 3250
BsmI GAATGC 1 cut(s) 2282
BsnI GGCC 8 cut(s) 901, 1371, 1836, 2550, 2817, 3079, 3118, 3766
Bso31I GGTCTC 1 cut(s) 1926
BsoBI CYCGRG 1 cut(s) 3768
Bsp1286I GDGCHC 6 cut(s) 56, 382, 1552, 1679, 3096, 3312
BspANI GGCC 8 cut(s) 901, 1371, 1836, 2550, 2817, 3079, 3118, 3766
BspCNI CTCAG 6 cut(s) 610, 748, 1897, 2497, 2656, 3566
BspFNI CGCG 1 cut(s) 211
BspLI GGNNCC 7 cut(s) 155, 429, 1161, 1965, 1984, 2803, 3266
BspMAI CTGCAG 2 cut(s) 2026, 2497
BspMI ACCTGC 2 cut(s) 1397, 3252
BspTNI GGTCTC 1 cut(s) 1926
BsrDI GCAATG 2 cut(s) 2006, 3421
BsrI ACTGG 9 cut(s) 1078, 1130, 1241, 1326, 1539, 1560, 2401, 2536, 3193
BssECI CCNNGG 7 cut(s) 184, 185, 383, 903, 2353, 3157, 3781
BssNI GRCGYC 1 cut(s) 1437
BssSI CACGAG 2 cut(s) 867, 1994
BssT1I CCWWGG 4 cut(s) 383, 903, 2353, 3781
Bst2BI CACGAG 2 cut(s) 867, 1994
Bst2UI CCWGG 6 cut(s) 186, 621, 777, 1058, 1373, 3133
Bst6I CTCTTC 4 cut(s) 964, 1512, 1716, 1751
BstACI GRCGYC 1 cut(s) 1437
BstAPI GCANNNNNTGC 2 cut(s) 1817, 2891
BstBAI YACGTR 3 cut(s) 314, 638, 2714
BstC8I GCNNGC 8 cut(s) 181, 225, 260, 432, 684, 762, 1495, 1809
BstENI CCTNNNNNAGG 2 cut(s) 1812, 2605
BstFNI CGCG 1 cut(s) 211
BstH2I RGCGCY 1 cut(s) 3756
BstHHI GCGC 3 cut(s) 211, 3149, 3755
BstMAI GTCTC 2 cut(s) 1926, 2404
BstMCI CGRYCG 1 cut(s) 1737
BstMWI GCNNNNNNNGC 6 cut(s) 821, 1817, 2547, 2556, 2891, 3210
BstNI CCWGG 6 cut(s) 186, 621, 777, 1058, 1373, 3133
BstNSI RCATGY 4 cut(s) 536, 686, 1455, 2235
BstPAI GACNNNNGTC 1 cut(s) 1733
BstSCI CCNGG 8 cut(s) 184, 619, 775, 1056, 1371, 2461, 3131, 3157
BstSFI CTRYAG 5 cut(s) 1200, 1272, 2022, 2040, 2493
BstSLI GKGCMC 3 cut(s) 382, 1552, 3312
BstUI CGCG 1 cut(s) 211
BstV1I GCAGC 9 cut(s) 802, 805, 808, 1249, 1659, 1669, 1864, 3802, 3805
BstV2I GAAGAC 1 cut(s) 514
BstXI CCANNNNNNTGG 1 cut(s) 205
BsuRI GGCC 8 cut(s) 901, 1371, 1836, 2550, 2817, 3079, 3118, 3766
BtrI CACGTC 1 cut(s) 3122
BtsI GCAGTG 2 cut(s) 111, 3601
BveI ACCTGC 2 cut(s) 1397, 3252
Cac8I GCNNGC 8 cut(s) 181, 225, 260, 432, 684, 762, 1495, 1809
CfoI GCGC 3 cut(s) 211, 3149, 3755
Cfr13I GGNCC 7 cut(s) 410, 562, 900, 1982, 3116, 3167, 3264
CseI GACGC 1 cut(s) 3665
CsiI ACCWGGT 1 cut(s) 619
Csp6I GTAC 8 cut(s) 194, 311, 444, 500, 1016, 2019, 2171, 2330
CspCI CAANNNNNGTGG 2 cut(s) 2761, 2796
CviQI GTAC 8 cut(s) 194, 311, 444, 500, 1016, 2019, 2171, 2330
EaeI YGGCCR 1 cut(s) 2815
Eam1104I CTCTTC 4 cut(s) 964, 1512, 1716, 1751
EarI CTCTTC 4 cut(s) 964, 1512, 1716, 1751
Ecl136II GAGCTC 2 cut(s) 54, 3094
Eco130I CCWWGG 4 cut(s) 383, 903, 2353, 3781
Eco147I AGGCCT 2 cut(s) 1836, 3079
Eco24I GRGCYC 3 cut(s) 56, 1679, 3096
Eco31I GGTCTC 1 cut(s) 1926
Eco32I GATATC 3 cut(s) 960, 2592, 3038
Eco47I GGWCC 5 cut(s) 410, 562, 1982, 3167, 3264
Eco53kI GAGCTC 2 cut(s) 54, 3094
Eco57I CTGAAG 8 cut(s) 78, 627, 690, 1740, 2403, 2493, 3639, 3684
Eco88I CYCGRG 1 cut(s) 3768
EcoICRI GAGCTC 2 cut(s) 54, 3094
EcoNI CCTNNNNNAGG 2 cut(s) 1812, 2605
EcoO109I RGGNCCY 2 cut(s) 3167, 3264
EcoRII CCWGG 6 cut(s) 184, 619, 775, 1056, 1371, 3131
EcoRV GATATC 3 cut(s) 960, 2592, 3038
EcoT14I CCWWGG 4 cut(s) 383, 903, 2353, 3781
EcoT22I ATGCAT 3 cut(s) 886, 979, 1453
EcoT38I GRGCYC 3 cut(s) 56, 1679, 3096
ErhI CCWWGG 4 cut(s) 383, 903, 2353, 3781
FaqI GGGAC 3 cut(s) 889, 1968, 3250
FauI CCCGC 2 cut(s) 3057, 3722
FblI GTMKAC 2 cut(s) 1203, 3181
FriOI GRGCYC 3 cut(s) 56, 1679, 3096
GlaI GCGC 3 cut(s) 210, 3148, 3754
GsaI CCCAGC 1 cut(s) 1920
GsuI CTGGAG 1 cut(s) 3444
HaeII RGCGCY 1 cut(s) 3756
HaeIII GGCC 8 cut(s) 901, 1371, 1836, 2550, 2817, 3079, 3118, 3766
HapII CCGG 2 cut(s) 2462, 3159
HgaI GACGC 1 cut(s) 3665
HhaI GCGC 3 cut(s) 211, 3149, 3755
Hin1I GRCGYC 1 cut(s) 1437
Hin6I GCGC 3 cut(s) 209, 3147, 3753
HinP1I GCGC 3 cut(s) 209, 3147, 3753
HincII GTYRAC 2 cut(s) 617, 742
HindII GTYRAC 2 cut(s) 617, 742
HindIII AAGCTT 2 cut(s) 485, 2475
HpaI GTTAAC 1 cut(s) 742
HpaII CCGG 2 cut(s) 2462, 3159
Hpy99I CGWCG 5 cut(s) 2781, 3092, 3126, 3375, 3765
HpyCH4IV ACGT 9 cut(s) 313, 637, 1437, 2209, 2328, 2713, 2776, 3121, 3370
HpyF10VI GCNNNNNNNGC 6 cut(s) 821, 1817, 2547, 2556, 2891, 3210
HpySE526I ACGT 9 cut(s) 313, 637, 1437, 2209, 2328, 2713, 2776, 3121, 3370
Hsp92I GRCGYC 1 cut(s) 1437
HspAI GCGC 3 cut(s) 209, 3147, 3753
KspAI GTTAAC 1 cut(s) 742
LmnI GCTCC 5 cut(s) 118, 427, 1159, 2498, 3332
Lsp1109I GCAGC 9 cut(s) 802, 805, 808, 1249, 1659, 1669, 1864, 3802, 3805
MabI ACCWGGT 1 cut(s) 619
MaeII ACGT 9 cut(s) 313, 637, 1437, 2209, 2328, 2713, 2776, 3121, 3370
MfeI CAATTG 2 cut(s) 669, 2456
MhlI GDGCHC 6 cut(s) 56, 382, 1552, 1679, 3096, 3312
MlyI GAGTC 2 cut(s) 160, 1337
MmeI TCCRAC 3 cut(s) 332, 2104, 3493
Mph1103I ATGCAT 3 cut(s) 886, 979, 1453
MroXI GAANNNNTTC 2 cut(s) 990, 1296
MseI TTAA 8 cut(s) 543, 741, 752, 1062, 1803, 1853, 1899, 2553
MslI CAYNNNNRTG 6 cut(s) 174, 2010, 2073, 2321, 2532, 2907
MspA1I CMGCKG 3 cut(s) 1733, 1973, 2249
MspI CCGG 2 cut(s) 2462, 3159
MspR9I CCNGG 8 cut(s) 186, 621, 777, 1058, 1373, 2463, 3133, 3159
MunI CAATTG 2 cut(s) 669, 2456
Mva1269I GAATGC 1 cut(s) 2282
MvaI CCWGG 6 cut(s) 186, 621, 777, 1058, 1373, 3133
MvnI CGCG 1 cut(s) 211
MwoI GCNNNNNNNGC 6 cut(s) 821, 1817, 2547, 2556, 2891, 3210
NciI CCSGG 2 cut(s) 2463, 3159
NlaIV GGNNCC 7 cut(s) 155, 429, 1161, 1965, 1984, 2803, 3266
NmuCI GTSAC 9 cut(s) 573, 709, 1559, 1745, 1846, 1991, 2035, 2066, 2234
NsiI ATGCAT 3 cut(s) 886, 979, 1453
NspI RCATGY 4 cut(s) 536, 686, 1455, 2235
OliI CACNNNNGTG 2 cut(s) 2010, 2907
PaeI GCATGC 1 cut(s) 686
PaeR7I CTCGAG 1 cut(s) 3768
PaqCI CACCTGC 1 cut(s) 1397
PasI CCCWGGG 1 cut(s) 185
PceI AGGCCT 2 cut(s) 1836, 3079
PciI ACATGT 1 cut(s) 2231
PcsI WCGNNNNNNNCGW 3 cut(s) 3096, 3649, 3766
PctI GAATGC 1 cut(s) 2282
PdmI GAANNNNTTC 2 cut(s) 990, 1296
PflMI CCANNNNNTGG 1 cut(s) 2834
PleI GAGTC 2 cut(s) 160, 1337
PpsI GAGTC 2 cut(s) 160, 1337
Ppu21I YACGTR 3 cut(s) 314, 638, 2714
PpuMI RGGWCCY 2 cut(s) 3167, 3264
PscI ACATGT 1 cut(s) 2231
PshAI GACNNNNGTC 1 cut(s) 1733
PsiI TTATAA 2 cut(s) 2934, 3111
Psp124BI GAGCTC 2 cut(s) 56, 3096
Psp5II RGGWCCY 2 cut(s) 3167, 3264
Psp6I CCWGG 6 cut(s) 184, 619, 775, 1056, 1371, 3131
PspFI CCCAGC 1 cut(s) 1916
PspGI CCWGG 6 cut(s) 184, 619, 775, 1056, 1371, 3131
PspN4I GGNNCC 7 cut(s) 155, 429, 1161, 1965, 1984, 2803, 3266
PspPI GGNCC 7 cut(s) 410, 562, 900, 1982, 3116, 3167, 3264
PspPPI RGGWCCY 2 cut(s) 3167, 3264
PsrI GAACNNNNNNTAC 2 cut(s) 436, 468
PstI CTGCAG 2 cut(s) 2026, 2497
PvuII CAGCTG 1 cut(s) 1973
RsaI GTAC 8 cut(s) 195, 312, 445, 501, 1017, 2020, 2172, 2331
RsaNI GTAC 8 cut(s) 194, 311, 444, 500, 1016, 2019, 2171, 2330
RseI CAYNNNNRTG 6 cut(s) 174, 2010, 2073, 2321, 2532, 2907
SacI GAGCTC 2 cut(s) 56, 3096
SaqAI TTAA 8 cut(s) 543, 741, 752, 1062, 1803, 1853, 1899, 2553
Sau96I GGNCC 7 cut(s) 410, 562, 900, 1982, 3116, 3167, 3264
ScaI AGTACT 1 cut(s) 445
SchI GAGTC 2 cut(s) 160, 1337
ScrFI CCNGG 8 cut(s) 186, 621, 777, 1058, 1373, 2463, 3133, 3159
SduI GDGCHC 6 cut(s) 56, 382, 1552, 1679, 3096, 3312
SexAI ACCWGGT 1 cut(s) 619
SfcI CTRYAG 5 cut(s) 1200, 1272, 2022, 2040, 2493
Sfr274I CTCGAG 1 cut(s) 3768
SinI GGWCC 5 cut(s) 410, 562, 1982, 3167, 3264
SlaI CTCGAG 1 cut(s) 3768
SmiMI CAYNNNNRTG 6 cut(s) 174, 2010, 2073, 2321, 2532, 2907
SmlI CTYRAG 2 cut(s) 1188, 3768
SmoI CTYRAG 2 cut(s) 1188, 3768
SpeI ACTAGT 1 cut(s) 713
SphI GCATGC 1 cut(s) 686
SseBI AGGCCT 2 cut(s) 1836, 3079
SspI AATATT 1 cut(s) 1489
SstI GAGCTC 2 cut(s) 56, 3096
StuI AGGCCT 2 cut(s) 1836, 3079
StyD4I CCNGG 8 cut(s) 184, 619, 775, 1056, 1371, 2461, 3131, 3157
StyI CCWWGG 4 cut(s) 383, 903, 2353, 3781
TaiI ACGT 9 cut(s) 316, 640, 1440, 2212, 2331, 2716, 2779, 3124, 3373
TaqI TCGA 8 cut(s) 50, 1590, 1737, 2687, 2841, 3588, 3760, 3769
TatI WGTACW 3 cut(s) 443, 499, 1015
TauI GCSGC 6 cut(s) 101, 104, 2249, 2820, 2885, 3652
Tru1I TTAA 8 cut(s) 543, 741, 752, 1062, 1803, 1853, 1899, 2553
Tru9I TTAA 8 cut(s) 543, 741, 752, 1062, 1803, 1853, 1899, 2553
TseFI GTSAC 9 cut(s) 573, 709, 1559, 1745, 1846, 1991, 2035, 2066, 2234
TseI GCWGC 9 cut(s) 815, 818, 821, 1237, 1647, 1682, 1877, 3790, 3793
Tsp45I GTSAC 9 cut(s) 573, 709, 1559, 1745, 1846, 1991, 2035, 2066, 2234
TspGWI ACGGA 5 cut(s) 554, 561, 2126, 3247, 3674
Van91I CCANNNNNTGG 1 cut(s) 2834
VneI GTGCAC 2 cut(s) 378, 1548
VpaK11BI GGWCC 5 cut(s) 410, 562, 1982, 3167, 3264
XagI CCTNNNNNAGG 2 cut(s) 1812, 2605
XapI RAATTY 3 cut(s) 328, 2192, 2291
XbaI TCTAGA 3 cut(s) 1387, 1924, 3197
XceI RCATGY 4 cut(s) 536, 686, 1455, 2235
XcmI CCANNNNNNNNNTGG 2 cut(s) 348, 2012
XhoI CTCGAG 1 cut(s) 3768
XmaJI CCTAGG 2 cut(s) 2353, 3781
XmiI GTMKAC 2 cut(s) 1203, 3181
XmnI GAANNNNTTC 2 cut(s) 990, 1296
ZraI GACGTC 1 cut(s) 1438
ZrmI AGTACT 1 cut(s) 445
Zsp2I ATGCAT 3 cut(s) 886, 979, 1453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.