RNA polymerase sigma factor sigE, chloroplastic
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 8 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 131 |
| AgsI | TTSAA | 1 cut(s) | 86 |
| AjnI | CCWGG | 1 cut(s) | 61 |
| AluBI | AGCT | 1 cut(s) | 143 |
| AluI | AGCT | 1 cut(s) | 143 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| Alw26I | GTCTC | 3 cut(s) | 24, 89, 299 |
| Alw44I | GTGCAC | 1 cut(s) | 57 |
| ApaLI | GTGCAC | 1 cut(s) | 57 |
| AsuC2I | CCSGG | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 2 cut(s) | 30, 146 |
| BaeGI | GKGCMC | 1 cut(s) | 61 |
| BbsI | GAAGAC | 1 cut(s) | 71 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BbvCI | CCTCAGC | 1 cut(s) | 144 |
| BciT130I | CCWGG | 1 cut(s) | 63 |
| BcnI | CCSGG | 1 cut(s) | 24 |
| BcoDI | GTCTC | 3 cut(s) | 24, 89, 299 |
| BfaI | CTAG | 1 cut(s) | 140 |
| Bme1390I | CCNGG | 2 cut(s) | 24, 63 |
| BmrFI | CCNGG | 2 cut(s) | 24, 63 |
| BpiI | GAAGAC | 1 cut(s) | 71 |
| Bpu10I | CCTNAGC | 1 cut(s) | 144 |
| BpuMI | CCSGG | 1 cut(s) | 24 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 131 |
| BseBI | CCWGG | 1 cut(s) | 63 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 131 |
| BseMII | CTCAG | 1 cut(s) | 135 |
| BseSI | GKGCMC | 1 cut(s) | 61 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BsiSI | CCGG | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 131 |
| BsmAI | GTCTC | 3 cut(s) | 24, 89, 299 |
| BsmBI | CGTCTC | 1 cut(s) | 24 |
| Bsp1286I | GDGCHC | 1 cut(s) | 61 |
| BspACI | CCGC | 1 cut(s) | 8 |
| BspCNI | CTCAG | 1 cut(s) | 136 |
| Bst2UI | CCWGG | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 2 cut(s) | 36, 42 |
| BstC8I | GCNNGC | 1 cut(s) | 12 |
| BstDEI | CTNAG | 1 cut(s) | 144 |
| BstMAI | GTCTC | 3 cut(s) | 24, 89, 299 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 261 |
| BstNI | CCWGG | 1 cut(s) | 63 |
| BstSCI | CCNGG | 2 cut(s) | 22, 61 |
| BstSLI | GKGCMC | 1 cut(s) | 61 |
| BstV2I | GAAGAC | 1 cut(s) | 71 |
| Cac8I | GCNNGC | 1 cut(s) | 12 |
| CseI | GACGC | 1 cut(s) | 3 |
| CsiI | ACCWGGT | 1 cut(s) | 61 |
| CviJI | RGCY | 4 cut(s) | 143, 220, 227, 337 |
| CviKI_1 | RGCY | 4 cut(s) | 143, 220, 227, 337 |
| DdeI | CTNAG | 1 cut(s) | 144 |
| EcoRII | CCWGG | 1 cut(s) | 61 |
| Esp3I | CGTCTC | 1 cut(s) | 24 |
| FaiI | YATR | 6 cut(s) | 158, 209, 301, 303, 314, 320 |
| FauNDI | CATATG | 1 cut(s) | 301 |
| FspBI | CTAG | 1 cut(s) | 140 |
| HapII | CCGG | 1 cut(s) | 24 |
| HgaI | GACGC | 1 cut(s) | 3 |
| HpaII | CCGG | 1 cut(s) | 24 |
| HphI | GGTGA | 2 cut(s) | 30, 146 |
| Hpy166II | GTNNAC | 3 cut(s) | 59, 137, 247 |
| Hpy8I | GTNNAC | 3 cut(s) | 59, 137, 247 |
| Hpy99I | CGWCG | 3 cut(s) | 19, 46, 49 |
| HpyCH4III | ACNGT | 2 cut(s) | 36, 42 |
| HpyCH4V | TGCA | 3 cut(s) | 59, 103, 312 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 261 |
| HpyF3I | CTNAG | 1 cut(s) | 144 |
| LpnPI | CCDG | 6 cut(s) | 24, 37, 48, 75, 210, 227 |
| MabI | ACCWGGT | 1 cut(s) | 61 |
| MaeI | CTAG | 1 cut(s) | 140 |
| MaeIII | GTNAC | 1 cut(s) | 36 |
| MboII | GAAGA | 2 cut(s) | 71, 74 |
| MhlI | GDGCHC | 1 cut(s) | 61 |
| MluCI | AATT | 1 cut(s) | 229 |
| MnlI | CCTC | 2 cut(s) | 67, 139 |
| MseI | TTAA | 3 cut(s) | 167, 192, 258 |
| MslI | CAYNNNNRTG | 1 cut(s) | 317 |
| MspI | CCGG | 1 cut(s) | 24 |
| MspR9I | CCNGG | 2 cut(s) | 24, 63 |
| MvaI | CCWGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 261 |
| NciI | CCSGG | 1 cut(s) | 24 |
| NdeI | CATATG | 1 cut(s) | 301 |
| NmuCI | GTSAC | 1 cut(s) | 36 |
| Psp6I | CCWGG | 1 cut(s) | 61 |
| PspGI | CCWGG | 1 cut(s) | 61 |
| RseI | CAYNNNNRTG | 1 cut(s) | 317 |
| SaqAI | TTAA | 3 cut(s) | 167, 192, 258 |
| ScrFI | CCNGG | 2 cut(s) | 24, 63 |
| SduI | GDGCHC | 1 cut(s) | 61 |
| SetI | ASST | 5 cut(s) | 67, 145, 199, 246, 319 |
| SexAI | ACCWGGT | 1 cut(s) | 61 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 317 |
| Sse9I | AATT | 1 cut(s) | 229 |
| SsiI | CCGC | 1 cut(s) | 8 |
| SspMI | CTAG | 1 cut(s) | 140 |
| StyD4I | CCNGG | 2 cut(s) | 22, 61 |
| TaaI | ACNGT | 2 cut(s) | 36, 42 |
| TaqI | TCGA | 1 cut(s) | 47 |
| TasI | AATT | 1 cut(s) | 229 |
| Tru1I | TTAA | 3 cut(s) | 167, 192, 258 |
| Tru9I | TTAA | 3 cut(s) | 167, 192, 258 |
| TseFI | GTSAC | 1 cut(s) | 36 |
| Tsp45I | GTSAC | 1 cut(s) | 36 |
| TspDTI | ATGAA | 1 cut(s) | 58 |
| VneI | GTGCAC | 1 cut(s) | 57 |
| XspI | CTAG | 1 cut(s) | 140 |