Rh3BG376000

belongs to the flavoprotein pyridine nucleotide cytochrome reductase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
47878369 .. 47881429
3061 bp
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UTR
Exon/CDS
Intron
Rh3BG376000.1

Sequence Viewer

Length: 366 bp
ATGGCTTCCATTTTTGGTCTTCTTCAAGTGAAAGAGACTTTGCAGAAAGATTTGTGGAGAGAACCAAATAAGGGTGAACTAGCTGAGGCAACAAGCTTTGAGCACCATGTTTACGTTGCTAAAAGGATTCGTCTTGATTTCAGGATATTTGCTAGTACTAGCCAGATCCCAGTCTTAGTTGTACGGAAGGATACTAGAAGACCCATTGAAAAGCTGAGATATGTTCCCAACATGAAGAAGCATATTAGAATGATTGCAGGTGGTTCTTGTATTACTTCAATTCTTCAGGTCATTGACGCTATACTTCAAAATCTTGTTGACACAACCAAGACCACTTTTGGTAACTGTGAGGGTTTTGGTGTTTAG

Protein Analysis

121

Amino Acids

13.76

Weight (kDa)

9.64

Isoelectric Point (pI)

46.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 248
Acc36I ACCTGC 1 cut(s) 248
AclWI GGATC 1 cut(s) 160
AcuI CTGAAG 1 cut(s) 269
AfaI GTAC 2 cut(s) 157, 183
AfiI CCNNNNNNNGG 1 cut(s) 71
AgsI TTSAA 4 cut(s) 26, 209, 279, 308
AluBI AGCT 3 cut(s) 83, 96, 214
AluI AGCT 3 cut(s) 83, 96, 214
Alw21I GWGCWC 1 cut(s) 105
Alw26I GTCTC 1 cut(s) 29
AlwI GGATC 1 cut(s) 160
AsuHPI GGTGA 1 cut(s) 86
BbsI GAAGAC 2 cut(s) 11, 205
Bbv12I GWGCWC 1 cut(s) 105
BbvCI CCTCAGC 1 cut(s) 84
BciVI GTATCC 1 cut(s) 184
BcoDI GTCTC 1 cut(s) 29
BfaI CTAG 4 cut(s) 80, 153, 159, 195
BfuAI ACCTGC 1 cut(s) 248
BfuI GTATCC 1 cut(s) 184
BmcAI AGTACT 1 cut(s) 157
BmrI ACTGGG 1 cut(s) 164
BmuI ACTGGG 1 cut(s) 164
BpiI GAAGAC 2 cut(s) 11, 205
Bpu10I CCTNAGC 1 cut(s) 84
Bsc4I CCNNNNNNNGG 1 cut(s) 71
Bse1I ACTGG 1 cut(s) 170
BseLI CCNNNNNNNGG 1 cut(s) 71
BseMII CTCAG 2 cut(s) 75, 206
BseNI ACTGG 1 cut(s) 170
BsiHKAI GWGCWC 1 cut(s) 105
BslI CCNNNNNNNGG 1 cut(s) 71
BsmAI GTCTC 1 cut(s) 29
Bsp1286I GDGCHC 1 cut(s) 105
Bsp143I GATC 1 cut(s) 165
BspCNI CTCAG 2 cut(s) 76, 207
BspMI ACCTGC 1 cut(s) 248
BspPI GGATC 1 cut(s) 160
BsrI ACTGG 1 cut(s) 170
BssMI GATC 1 cut(s) 165
Bst4CI ACNGT 1 cut(s) 347
BstDEI CTNAG 3 cut(s) 84, 175, 215
BstKTI GATC 1 cut(s) 168
BstMAI GTCTC 1 cut(s) 29
BstMBI GATC 1 cut(s) 165
BstV2I GAAGAC 2 cut(s) 11, 205
BstX2I RGATCY 1 cut(s) 165
BstYI RGATCY 1 cut(s) 165
BsuI GTATCC 1 cut(s) 184
BveI ACCTGC 1 cut(s) 248
CseI GACGC 1 cut(s) 305
Csp6I GTAC 2 cut(s) 156, 182
CviAII CATG 2 cut(s) 107, 232
CviJI RGCY 5 cut(s) 5, 83, 96, 162, 214
CviKI_1 RGCY 5 cut(s) 5, 83, 96, 162, 214
CviQI GTAC 2 cut(s) 156, 182
DdeI CTNAG 3 cut(s) 84, 175, 215
DpnI GATC 1 cut(s) 167
DpnII GATC 1 cut(s) 165
Eco57I CTGAAG 1 cut(s) 269
FaeI CATG 2 cut(s) 110, 235
FaiI YATR 5 cut(s) 108, 222, 233, 243, 302
FatI CATG 2 cut(s) 106, 231
FspBI CTAG 4 cut(s) 80, 153, 159, 195
HgaI GACGC 1 cut(s) 305
Hin1II CATG 2 cut(s) 110, 235
HincII GTYRAC 1 cut(s) 319
HindII GTYRAC 1 cut(s) 319
HindIII AAGCTT 1 cut(s) 94
HinfI GANTC 1 cut(s) 127
HphI GGTGA 1 cut(s) 86
Hpy166II GTNNAC 3 cut(s) 77, 112, 319
Hpy188III TCNNGA 2 cut(s) 134, 142
Hpy8I GTNNAC 3 cut(s) 77, 112, 319
HpyAV CCTTC 1 cut(s) 181
HpyCH4III ACNGT 1 cut(s) 347
HpyCH4IV ACGT 1 cut(s) 114
HpyCH4V TGCA 2 cut(s) 43, 257
HpyF3I CTNAG 3 cut(s) 84, 175, 215
HpySE526I ACGT 1 cut(s) 114
Hsp92II CATG 2 cut(s) 110, 235
Kzo9I GATC 1 cut(s) 165
LpnPI CCDG 5 cut(s) 127, 176, 183, 243, 272
MaeI CTAG 4 cut(s) 80, 153, 159, 195
MaeII ACGT 1 cut(s) 114
MaeIII GTNAC 1 cut(s) 341
MalI GATC 1 cut(s) 167
MboI GATC 1 cut(s) 165
MboII GAAGA 5 cut(s) 11, 14, 210, 247, 275
MflI RGATCY 1 cut(s) 165
MhlI GDGCHC 1 cut(s) 105
MluCI AATT 1 cut(s) 279
MnlI CCTC 2 cut(s) 79, 343
NdeII GATC 1 cut(s) 165
NlaIII CATG 2 cut(s) 110, 235
PaqCI CACCTGC 1 cut(s) 248
PfeI GAWTC 1 cut(s) 127
PsuI RGATCY 1 cut(s) 165
RsaI GTAC 2 cut(s) 157, 183
RsaNI GTAC 2 cut(s) 156, 182
Sau3AI GATC 1 cut(s) 165
ScaI AGTACT 1 cut(s) 157
SduI GDGCHC 1 cut(s) 105
SetI ASST 6 cut(s) 85, 98, 117, 216, 262, 291
Sse9I AATT 1 cut(s) 279
SspMI CTAG 4 cut(s) 80, 153, 159, 195
TaaI ACNGT 1 cut(s) 347
TaiI ACGT 1 cut(s) 117
TasI AATT 1 cut(s) 279
TatI WGTACW 1 cut(s) 155
TfiI GAWTC 1 cut(s) 127
TspDTI ATGAA 1 cut(s) 248
TspGWI ACGGA 1 cut(s) 199
XspI CTAG 4 cut(s) 80, 153, 159, 195
ZrmI AGTACT 1 cut(s) 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.