Rh4CG188500

Belongs to the MCM family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
40752511 .. 40756601
4091 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG188500.1

Sequence Viewer

Length: 357 bp
ATGGTCACCTCTCTCAAGTGTAATTTCTTTTCTTTCATCCAGATTGCAGGTGGTTCTAGTATTACTCCAATGCTTCAGGTCATTGACGCTACACTAAAAAATCTTGATGACACAACCAAGGTTACTGGGATATATCGGGCTTTGAGCGTAAGAGTTGGACCAACACAGAGAACTGCAAAATCATTATTCAAGACTTACATTGATTGTCTGCATATAAAAAATTCTAACAAGTCTAGAATGCGGGCAGAGGCGAAGACGGAAGTTGAGAATTCCTTGGGTGGAAATTCAGAAGAGATTCTTTTTGATGAAAAGAGGGTTTGGGAATATCTAGTGAAATGTTGCCTAAAGAGTCACTAA

Protein Analysis

118

Amino Acids

13.28

Weight (kDa)

9.14

Isoelectric Point (pI)

24.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 38
Acc36I ACCTGC 1 cut(s) 38
AciI CCGC 1 cut(s) 241
AcsI RAATTY 3 cut(s) 220, 268, 283
AcuI CTGAAG 1 cut(s) 59
AgsI TTSAA 1 cut(s) 190
ApoI RAATTY 3 cut(s) 220, 268, 283
Asp700I GAANNNNTTC 1 cut(s) 294
AspS9I GGNCC 1 cut(s) 158
AvaII GGWCC 1 cut(s) 158
BbsI GAAGAC 1 cut(s) 260
BfaI CTAG 3 cut(s) 57, 234, 329
BfuAI ACCTGC 1 cut(s) 38
Bme18I GGWCC 1 cut(s) 158
BmgT120I GGNCC 1 cut(s) 158
BmrI ACTGGG 1 cut(s) 135
BmuI ACTGGG 1 cut(s) 135
BpiI GAAGAC 1 cut(s) 260
BsaJI CCNNGG 2 cut(s) 117, 273
Bse1I ACTGG 1 cut(s) 130
BseDI CCNNGG 2 cut(s) 117, 273
BseGI GGATG 1 cut(s) 36
BseNI ACTGG 1 cut(s) 130
BsmI GAATGC 1 cut(s) 243
BspACI CCGC 1 cut(s) 241
BspMI ACCTGC 1 cut(s) 38
BsrI ACTGG 1 cut(s) 130
BssECI CCNNGG 2 cut(s) 117, 273
BssT1I CCWWGG 2 cut(s) 117, 273
Bst6I CTCTTC 1 cut(s) 285
BstC8I GCNNGC 1 cut(s) 243
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 1 cut(s) 36
BstPI GGTNACC 1 cut(s) 4
BstV2I GAAGAC 1 cut(s) 260
BtsCI GGATG 1 cut(s) 36
BveI ACCTGC 1 cut(s) 38
Cac8I GCNNGC 1 cut(s) 243
Cfr13I GGNCC 1 cut(s) 158
CseI GACGC 1 cut(s) 95
CviJI RGCY 1 cut(s) 140
CviKI_1 RGCY 1 cut(s) 140
Eam1104I CTCTTC 1 cut(s) 285
EarI CTCTTC 1 cut(s) 285
Eco130I CCWWGG 2 cut(s) 117, 273
Eco47I GGWCC 1 cut(s) 158
Eco57I CTGAAG 1 cut(s) 59
Eco91I GGTNACC 1 cut(s) 4
EcoO65I GGTNACC 1 cut(s) 4
EcoRI GAATTC 1 cut(s) 268
EcoT14I CCWWGG 2 cut(s) 117, 273
ErhI CCWWGG 2 cut(s) 117, 273
FaiI YATR 3 cut(s) 133, 213, 215
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FauI CCCGC 1 cut(s) 234
FokI GGATG 1 cut(s) 23
FspBI CTAG 3 cut(s) 57, 234, 329
HgaI GACGC 1 cut(s) 95
HinfI GANTC 2 cut(s) 295, 349
Hpy188I TCNGA 1 cut(s) 289
Hpy188III TCNNGA 4 cut(s) 40, 104, 190, 234
HpyCH4V TGCA 3 cut(s) 47, 176, 211
LpnPI CCDG 4 cut(s) 33, 53, 62, 111
MaeI CTAG 3 cut(s) 57, 234, 329
MaeIII GTNAC 3 cut(s) 4, 121, 350
MboII GAAGA 2 cut(s) 265, 302
MluCI AATT 4 cut(s) 22, 220, 268, 283
MmeI TCCRAC 1 cut(s) 136
MnlI CCTC 3 cut(s) 19, 241, 306
MroXI GAANNNNTTC 1 cut(s) 294
Mva1269I GAATGC 1 cut(s) 243
NmuCI GTSAC 2 cut(s) 4, 350
PaqCI CACCTGC 1 cut(s) 38
PctI GAATGC 1 cut(s) 243
PdmI GAANNNNTTC 1 cut(s) 294
PfeI GAWTC 1 cut(s) 295
PspEI GGTNACC 1 cut(s) 4
PspPI GGNCC 1 cut(s) 158
Sau96I GGNCC 1 cut(s) 158
SetI ASST 4 cut(s) 11, 52, 81, 123
SinI GGWCC 1 cut(s) 158
SmlI CTYRAG 1 cut(s) 14
SmoI CTYRAG 1 cut(s) 14
Sse9I AATT 4 cut(s) 22, 220, 268, 283
SsiI CCGC 1 cut(s) 241
SspMI CTAG 3 cut(s) 57, 234, 329
StyI CCWWGG 2 cut(s) 117, 273
TasI AATT 4 cut(s) 22, 220, 268, 283
TfiI GAWTC 1 cut(s) 295
TseFI GTSAC 2 cut(s) 4, 350
Tsp45I GTSAC 2 cut(s) 4, 350
TspDTI ATGAA 2 cut(s) 25, 321
TspGWI ACGGA 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 158
XapI RAATTY 3 cut(s) 220, 268, 283
XbaI TCTAGA 1 cut(s) 233
XcmI CCANNNNNNNNNTGG 1 cut(s) 47
XmnI GAANNNNTTC 1 cut(s) 294
XspI CTAG 3 cut(s) 57, 234, 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.