RLG00000002160

acid phosphatase activity

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
26533092 .. 26533477
386 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002160

Sequence Viewer

Length: 321 bp
ATGCCATCTAGGTATTCTAGCACCTGGTCTAGTGTTTGCTTTAGTGCTGCCTTATTAAAAAAAGGTCTTACTTGGAGAATTGGAAATGGGAATTCTGTTTCTTTTTGGACTGATAACTGGACTGAGTTTGGTGTTCTTAAAGATCTTGCACTACTGGACTCTACAATGGTCGATGATAGCATGCTTGTCCAAGATTTTTGGAGTAACAATGAATGGGATGCAACTCTTCTTTATGCTTGTCTGCCAGCTGAGGTAGTGGATAAAATTTTATGTATTCTGGTATTCCCAGTGATGTTACTGGACAACAATGTGATAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

107

Amino Acids

11.95

Weight (kDa)

4.18

Isoelectric Point (pI)

28.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 91, 264
AjnI CCWGG 1 cut(s) 23
AluBI AGCT 2 cut(s) 248, 318
AluI AGCT 2 cut(s) 248, 318
ApeKI GCWGC 1 cut(s) 47
ApoI RAATTY 2 cut(s) 91, 264
BbvCI CCTCAGC 1 cut(s) 249
BbvI GCAGC 1 cut(s) 34
BccI CCATC 1 cut(s) 13
BciT130I CCWGG 1 cut(s) 25
BfaI CTAG 3 cut(s) 9, 18, 30
BglII AGATCT 1 cut(s) 142
BisI GCNGC 1 cut(s) 48
BlsI GCNGC 1 cut(s) 49
Bme1390I CCNGG 1 cut(s) 25
BmrFI CCNGG 1 cut(s) 25
BmrI ACTGGG 1 cut(s) 281
BmsI GCATC 1 cut(s) 208
BmuI ACTGGG 1 cut(s) 281
Bpu10I CCTNAGC 1 cut(s) 249
Bse1I ACTGG 4 cut(s) 122, 159, 287, 303
BseBI CCWGG 1 cut(s) 25
BseGI GGATG 1 cut(s) 223
BseMII CTCAG 2 cut(s) 114, 240
BseNI ACTGG 4 cut(s) 122, 159, 287, 303
BseXI GCAGC 1 cut(s) 34
Bsp143I GATC 1 cut(s) 142
BspCNI CTCAG 2 cut(s) 115, 241
BsrI ACTGG 4 cut(s) 122, 159, 287, 303
BssMI GATC 1 cut(s) 142
Bst2UI CCWGG 1 cut(s) 25
Bst6I CTCTTC 1 cut(s) 231
BstC8I GCNNGC 2 cut(s) 182, 246
BstDEI CTNAG 2 cut(s) 123, 249
BstF5I GGATG 1 cut(s) 223
BstKTI GATC 1 cut(s) 145
BstMBI GATC 1 cut(s) 142
BstNI CCWGG 1 cut(s) 25
BstNSI RCATGY 1 cut(s) 184
BstSCI CCNGG 1 cut(s) 23
BstV1I GCAGC 1 cut(s) 34
BstX2I RGATCY 1 cut(s) 142
BstYI RGATCY 1 cut(s) 142
BtsCI GGATG 1 cut(s) 223
BtsIMutI CAGTG 1 cut(s) 294
Cac8I GCNNGC 2 cut(s) 182, 246
CsiI ACCWGGT 1 cut(s) 23
CviAII CATG 1 cut(s) 181
CviJI RGCY 2 cut(s) 248, 318
CviKI_1 RGCY 2 cut(s) 248, 318
DdeI CTNAG 2 cut(s) 123, 249
DpnI GATC 1 cut(s) 144
DpnII GATC 1 cut(s) 142
Eam1104I CTCTTC 1 cut(s) 231
EarI CTCTTC 1 cut(s) 231
EcoRI GAATTC 1 cut(s) 91
EcoRII CCWGG 1 cut(s) 23
FaeI CATG 1 cut(s) 184
FaiI YATR 3 cut(s) 182, 234, 271
FatI CATG 1 cut(s) 180
Fnu4HI GCNGC 1 cut(s) 48
FokI GGATG 1 cut(s) 230
Fsp4HI GCNGC 1 cut(s) 48
FspBI CTAG 3 cut(s) 9, 18, 30
GluI GCNGC 1 cut(s) 48
Hin1II CATG 1 cut(s) 184
HinfI GANTC 1 cut(s) 158
HpyCH4V TGCA 2 cut(s) 149, 221
HpyF3I CTNAG 2 cut(s) 123, 249
Hsp92II CATG 1 cut(s) 184
Kzo9I GATC 1 cut(s) 142
LpnPI CCDG 8 cut(s) 10, 37, 103, 140, 258, 263, 284, 300
Lsp1109I GCAGC 1 cut(s) 34
LweI GCATC 1 cut(s) 208
MabI ACCWGGT 1 cut(s) 23
MaeI CTAG 3 cut(s) 9, 18, 30
MaeIII GTNAC 2 cut(s) 203, 294
MalI GATC 1 cut(s) 144
MboI GATC 1 cut(s) 142
MboII GAAGA 1 cut(s) 218
MflI RGATCY 1 cut(s) 142
MluCI AATT 3 cut(s) 78, 91, 264
MlyI GAGTC 1 cut(s) 152
MnlI CCTC 1 cut(s) 244
MseI TTAA 2 cut(s) 56, 138
MspA1I CMGCKG 1 cut(s) 248
MspR9I CCNGG 1 cut(s) 25
MvaI CCWGG 1 cut(s) 25
NdeII GATC 1 cut(s) 142
NlaIII CATG 1 cut(s) 184
NspI RCATGY 1 cut(s) 184
PaeI GCATGC 1 cut(s) 184
PkrI GCNGC 1 cut(s) 49
PleI GAGTC 1 cut(s) 152
PpsI GAGTC 1 cut(s) 152
Psp6I CCWGG 1 cut(s) 23
PspGI CCWGG 1 cut(s) 23
PsuI RGATCY 1 cut(s) 142
PvuII CAGCTG 1 cut(s) 248
SaqAI TTAA 2 cut(s) 56, 138
SatI GCNGC 1 cut(s) 48
Sau3AI GATC 1 cut(s) 142
SchI GAGTC 1 cut(s) 152
ScrFI CCNGG 1 cut(s) 25
SetI ASST 6 cut(s) 14, 26, 67, 250, 255, 320
SexAI ACCWGGT 1 cut(s) 23
SfaNI GCATC 1 cut(s) 208
SphI GCATGC 1 cut(s) 184
Sse9I AATT 3 cut(s) 78, 91, 264
SspMI CTAG 3 cut(s) 9, 18, 30
StyD4I CCNGG 1 cut(s) 23
TaqI TCGA 1 cut(s) 171
TasI AATT 3 cut(s) 78, 91, 264
Tru1I TTAA 2 cut(s) 56, 138
Tru9I TTAA 2 cut(s) 56, 138
TscAI CASTG 1 cut(s) 294
TseI GCWGC 1 cut(s) 47
TspDTI ATGAA 1 cut(s) 225
TspRI CASTG 1 cut(s) 294
XapI RAATTY 2 cut(s) 91, 264
XceI RCATGY 1 cut(s) 184
XspI CTAG 3 cut(s) 9, 18, 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.