Ribonuclease H
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 237 |
| AccB1I | GGYRCC | 1 cut(s) | 164 |
| AcsI | RAATTY | 3 cut(s) | 107, 315, 407 |
| AcuI | CTGAAG | 2 cut(s) | 455, 461 |
| AgsI | TTSAA | 3 cut(s) | 64, 314, 333 |
| AjnI | CCWGG | 2 cut(s) | 160, 283 |
| AluBI | AGCT | 2 cut(s) | 439, 475 |
| AluI | AGCT | 2 cut(s) | 439, 475 |
| Alw21I | GWGCWC | 1 cut(s) | 462 |
| Alw26I | GTCTC | 2 cut(s) | 46, 412 |
| ApeKI | GCWGC | 1 cut(s) | 127 |
| ApoI | RAATTY | 3 cut(s) | 107, 315, 407 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 309 |
| BanI | GGYRCC | 1 cut(s) | 164 |
| BbsI | GAAGAC | 2 cut(s) | 312, 449 |
| Bbv12I | GWGCWC | 1 cut(s) | 462 |
| BbvI | GCAGC | 1 cut(s) | 114 |
| BccI | CCATC | 2 cut(s) | 86, 287 |
| BciT130I | CCWGG | 2 cut(s) | 162, 285 |
| BcoDI | GTCTC | 2 cut(s) | 46, 412 |
| BfmI | CTRYAG | 1 cut(s) | 422 |
| BfuAI | ACCTGC | 1 cut(s) | 237 |
| BisI | GCNGC | 1 cut(s) | 128 |
| BlsI | GCNGC | 1 cut(s) | 129 |
| Bme1390I | CCNGG | 2 cut(s) | 162, 285 |
| BmiI | GGNNCC | 2 cut(s) | 52, 166 |
| BmrFI | CCNGG | 2 cut(s) | 162, 285 |
| BmsI | GCATC | 1 cut(s) | 196 |
| BpiI | GAAGAC | 2 cut(s) | 312, 449 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 380, 412 |
| BpuEI | CTTGAG | 1 cut(s) | 461 |
| BsaJI | CCNNGG | 3 cut(s) | 46, 284, 401 |
| BseBI | CCWGG | 2 cut(s) | 162, 285 |
| BseDI | CCNNGG | 3 cut(s) | 46, 284, 401 |
| BseGI | GGATG | 1 cut(s) | 211 |
| BseMII | CTCAG | 1 cut(s) | 378 |
| BseRI | GAGGAG | 1 cut(s) | 123 |
| BseXI | GCAGC | 1 cut(s) | 114 |
| BshNI | GGYRCC | 1 cut(s) | 164 |
| BsiHKAI | GWGCWC | 1 cut(s) | 462 |
| BsmAI | GTCTC | 2 cut(s) | 46, 412 |
| Bsp1286I | GDGCHC | 1 cut(s) | 462 |
| Bsp19I | CCATGG | 1 cut(s) | 46 |
| BspCNI | CTCAG | 1 cut(s) | 379 |
| BspLI | GGNNCC | 2 cut(s) | 52, 166 |
| BspMAI | CTGCAG | 1 cut(s) | 426 |
| BspMI | ACCTGC | 1 cut(s) | 237 |
| BspQI | GCTCTTC | 1 cut(s) | 162 |
| BspT107I | GGYRCC | 1 cut(s) | 164 |
| BssECI | CCNNGG | 3 cut(s) | 46, 284, 401 |
| BssT1I | CCWWGG | 2 cut(s) | 46, 401 |
| Bst2UI | CCWGG | 2 cut(s) | 162, 285 |
| Bst6I | CTCTTC | 1 cut(s) | 162 |
| BstDEI | CTNAG | 1 cut(s) | 387 |
| BstDSI | CCRYGG | 1 cut(s) | 46 |
| BstEII | GGTNACC | 1 cut(s) | 22 |
| BstF5I | GGATG | 1 cut(s) | 211 |
| BstMAI | GTCTC | 2 cut(s) | 46, 412 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 238 |
| BstNI | CCWGG | 2 cut(s) | 162, 285 |
| BstPI | GGTNACC | 1 cut(s) | 22 |
| BstSCI | CCNGG | 2 cut(s) | 160, 283 |
| BstSFI | CTRYAG | 1 cut(s) | 422 |
| BstV1I | GCAGC | 1 cut(s) | 114 |
| BstV2I | GAAGAC | 2 cut(s) | 312, 449 |
| BtgI | CCRYGG | 1 cut(s) | 46 |
| BtsCI | GGATG | 1 cut(s) | 211 |
| BveI | ACCTGC | 1 cut(s) | 237 |
| CviAII | CATG | 2 cut(s) | 47, 467 |
| CviJI | RGCY | 4 cut(s) | 53, 127, 439, 475 |
| CviKI_1 | RGCY | 4 cut(s) | 53, 127, 439, 475 |
| DdeI | CTNAG | 1 cut(s) | 387 |
| Eam1104I | CTCTTC | 1 cut(s) | 162 |
| EarI | CTCTTC | 1 cut(s) | 162 |
| Eco130I | CCWWGG | 2 cut(s) | 46, 401 |
| Eco57I | CTGAAG | 2 cut(s) | 455, 461 |
| Eco91I | GGTNACC | 1 cut(s) | 22 |
| EcoO65I | GGTNACC | 1 cut(s) | 22 |
| EcoRII | CCWGG | 2 cut(s) | 160, 283 |
| EcoT14I | CCWWGG | 2 cut(s) | 46, 401 |
| ErhI | CCWWGG | 2 cut(s) | 46, 401 |
| FaeI | CATG | 2 cut(s) | 50, 470 |
| FatI | CATG | 2 cut(s) | 46, 466 |
| Fnu4HI | GCNGC | 1 cut(s) | 128 |
| FokI | GGATG | 1 cut(s) | 218 |
| Fsp4HI | GCNGC | 1 cut(s) | 128 |
| GluI | GCNGC | 1 cut(s) | 128 |
| Hin1II | CATG | 2 cut(s) | 50, 470 |
| HinfI | GANTC | 1 cut(s) | 427 |
| Hpy166II | GTNNAC | 1 cut(s) | 274 |
| Hpy188III | TCNNGA | 2 cut(s) | 112, 478 |
| Hpy8I | GTNNAC | 1 cut(s) | 274 |
| HpyAV | CCTTC | 1 cut(s) | 258 |
| HpyCH4V | TGCA | 3 cut(s) | 180, 327, 424 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 238 |
| HpyF3I | CTNAG | 1 cut(s) | 387 |
| Hsp92II | CATG | 2 cut(s) | 50, 470 |
| LguI | GCTCTTC | 1 cut(s) | 162 |
| LmnI | GCTCC | 1 cut(s) | 50 |
| LpnPI | CCDG | 8 cut(s) | 97, 147, 174, 237, 242, 270, 297, 446 |
| Lsp1109I | GCAGC | 1 cut(s) | 114 |
| LweI | GCATC | 1 cut(s) | 196 |
| MaeIII | GTNAC | 1 cut(s) | 22 |
| MboII | GAAGA | 4 cut(s) | 149, 236, 317, 454 |
| MhlI | GDGCHC | 1 cut(s) | 462 |
| MluCI | AATT | 5 cut(s) | 102, 107, 267, 315, 407 |
| MmeI | TCCRAC | 2 cut(s) | 67, 197 |
| MnlI | CCTC | 4 cut(s) | 62, 141, 144, 291 |
| MroXI | GAANNNNTTC | 1 cut(s) | 309 |
| MseI | TTAA | 3 cut(s) | 105, 261, 375 |
| MspR9I | CCNGG | 2 cut(s) | 162, 285 |
| MvaI | CCWGG | 2 cut(s) | 162, 285 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 238 |
| NcoI | CCATGG | 1 cut(s) | 46 |
| NlaIII | CATG | 2 cut(s) | 50, 470 |
| NlaIV | GGNNCC | 2 cut(s) | 52, 166 |
| PciSI | GCTCTTC | 1 cut(s) | 162 |
| PdmI | GAANNNNTTC | 1 cut(s) | 309 |
| PfeI | GAWTC | 1 cut(s) | 427 |
| PkrI | GCNGC | 1 cut(s) | 129 |
| Psp6I | CCWGG | 2 cut(s) | 160, 283 |
| PspEI | GGTNACC | 1 cut(s) | 22 |
| PspGI | CCWGG | 2 cut(s) | 160, 283 |
| PspN4I | GGNNCC | 2 cut(s) | 52, 166 |
| PstI | CTGCAG | 1 cut(s) | 426 |
| SapI | GCTCTTC | 1 cut(s) | 162 |
| SaqAI | TTAA | 3 cut(s) | 105, 261, 375 |
| SatI | GCNGC | 1 cut(s) | 128 |
| ScrFI | CCNGG | 2 cut(s) | 162, 285 |
| SduI | GDGCHC | 1 cut(s) | 462 |
| SetI | ASST | 3 cut(s) | 231, 441, 477 |
| SfaNI | GCATC | 1 cut(s) | 196 |
| SfcI | CTRYAG | 1 cut(s) | 422 |
| SmlI | CTYRAG | 1 cut(s) | 476 |
| SmoI | CTYRAG | 1 cut(s) | 476 |
| Sse9I | AATT | 5 cut(s) | 102, 107, 267, 315, 407 |
| SspI | AATATT | 1 cut(s) | 184 |
| StyD4I | CCNGG | 2 cut(s) | 160, 283 |
| StyI | CCWWGG | 2 cut(s) | 46, 401 |
| TasI | AATT | 5 cut(s) | 102, 107, 267, 315, 407 |
| TfiI | GAWTC | 1 cut(s) | 427 |
| Tru1I | TTAA | 3 cut(s) | 105, 261, 375 |
| Tru9I | TTAA | 3 cut(s) | 105, 261, 375 |
| TseI | GCWGC | 1 cut(s) | 127 |
| XapI | RAATTY | 3 cut(s) | 107, 315, 407 |
| XmnI | GAANNNNTTC | 1 cut(s) | 309 |