Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009453.1

Orthogroup ID

OG0000516

Physical Location & Seq

Genomic Coordinates Reverse (-)

6362 .. 17432

Gene Structure 11071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009453.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

atgcagggggctcagctgagaaagcacattgacgcaacactaggcagtgggaacctaagagaatcagtaaagcttccaactggagaagatttaaatgagtggctggctgtcaacagttttggatgcaccgatcagtttatggcaagacgattttgtggtctctttgattctgcaggttttggaagacattttggatcatttcaagattatatgaagaacaagaagctcgagatccttcgaccccatgaacatgtcaagaagatcgagtcggtgacaggccctcgcctcatatccaaatcctcactctttccctaccacctccacacctttcctctatcccaaacccccattttccctgggttctcttccaaggttcaagattctagggtttcggtgaaggtcgttctagccagcctctacgcagtcaccaggattaggcctggaggagctgtcgagagcgataagctgccgtccgatgtgaggaagcgcaccatggacactgtcgatgcctgcggaaggagagtgacgattggtgacgtctccagcagagctgggctcaagctcaatgaggctcagaacgctttgcaggctctcgctgccgacactgagggctccttagaggtctcggatgaaggcgatgtgctttatgttttccccaaagattatcgagcaaagcttcttgccaagtcgtttcgattgagaattgagcctttgctggagaaggcaaaggtcgggatagagtatgtagcgagggtttcatttggaactgccctcattgcctccattgttcttatttatgctgcaatcattgttgccctttcttctagtaggagcgaggatgacaatcgtggacgacgtggaagatcatatgattcggggttcactttttacatgagttccggtcatgttgttcatgaagaagacaatgaccaaggcgaggtttacattgatgaagctgacatccttaatgaagtcaatttcaatgaggaagatcttcctaatgcagacgaccaagcactccgtgacgccacgccatcggccgccagagctcgacctggagcttctgtccctcaaaagctcgagtcctacacctccaggacctcctccccctctttcgtctccatccagttcccaatgcccaacttaaccaccaactccgactacgagatctccattcgtaaccgccttgttaagcaggtcgccttggcctatctccagcctgtgtcctccacttgcgtcccacacttgctccgccgcctcaagctcaagtgcacccctgcctctccttcatcacccactgcctcctcccctttctctcccatacttcgttgtctttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008198 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016226 GO:0019538 GO:0022607 GO:0031163 GO:0031967 GO:0031974 GO:0031975 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0048037 GO:0051186 GO:0051536 GO:0051537 GO:0051540 GO:0051604 GO:0070013 GO:0071704 GO:0071840 GO:0097428 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

445

Amino Acids

49.06

Weight (kDa)

8.6

Isoelectric Point (pI)

58.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03900 AT5G03900
fragaria_vesca	FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18750 FvH4_6g18751 FvH4_6g18760
malus_domestica	MD12G1036400.v1.1 MD14G1023200.v1.1
prunus_persica	Prupe.7G109900_v2.0.a1 Prupe.7G109900_v2.0.a1 Prupe.7G109900_v2.0.a1
pyrus_communis	pycom12g02390 pycom14g02210
rosa_chinensis	RchiOBHm_Chr3g0473691 RchiOBHm_Chr3g0473711 RchiOBHm_Chr3g0473721 RchiOBHm_Chr3g0473731 RchiOBHm_Chr3g0473761 RchiOBHm_Chr6g0257921 RchiOBHm_Chr7g0229131
rosa_laevigata	RLG00000009927 RLG00000018798 RLG00000022503 RLG00000023987 RLG00000023989 RLG00000023993
rosa_multiflora	Rmu_co8137536.1_g000001 Rmu_sc0000140.1_g000001 Rmu_sc0000302.1_g000016 Rmu_sc0002897.1_g000003 Rmu_sc0002963.1_g000003 Rmu_sc0003069.1_g000002 Rmu_sc0004688.1_g000012 Rmu_sc0005617.1_g000005 Rmu_sc0005975.1_g000001 Rmu_sc0005978.1_g000005 Rmu_sc0005978.1_g000006 Rmu_sc0006074.1_g000005 Rmu_sc0007035.1_g000012 Rmu_sc0009453.1_g000002 Rmu_sc0013078.1_g000001 Rmu_ssc0000210.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029350 Rroxscaffold_6G00407830 Rroxscaffold_6G00407880 Rroxscaffold_6G00407900 Rroxscaffold_6G00407910 Rroxscaffold_6G00407940
rosa_rugosa	Rorug02G0048000 Rorug03G0134300 Rorug03G0134400 Rorug03G0134500 Rorug03G0134600 Rorug03G0134700 Rorug03G0134900 Rorug03G0135000 Rorug03G0135000
rosa_samantha	Rh2AG590800 Rh2CG599100 Rh3AG185600 Rh3AG185700 Rh3AG185800 Rh3AG186000 Rh3BG213700 Rh3BG213900 Rh3CG210300 Rh3CG210400 Rh3CG210500 Rh3CG210700 Rh3DG209400 Rh3DG209500 Rh3DG209600 Rh3DG209800
rosa_wichuraiana	Rw0G007990 Rw0G008000 Rw0G008020 Rw0G008870 Rw3G016960 Rw3G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	540
Acc36I	ACCTGC	2 cut(s)	164, 1186
AciI	CCGC	5 cut(s)	513, 1041, 1183, 1252, 1255
AclWI	GGATC	2 cut(s)	202, 226
AcoI	YGGCCR	1 cut(s)	1038
AcyI	GRCGYC	2 cut(s)	537, 1026
AdeI	CACNNNGTG	1 cut(s)	1022
AfiI	CCNNNNNNNGG	4 cut(s)	435, 480, 516, 937
AflIII	ACRYGT	1 cut(s)	250
AgsI	TTSAA	3 cut(s)	203, 377, 982
AjiI	CACGTC	1 cut(s)	857
AjnI	CCWGG	5 cut(s)	355, 428, 439, 1054, 1094
Alw21I	GWGCWC	2 cut(s)	1051, 1274
Alw26I	GTCTC	4 cut(s)	164, 544, 628, 1123
Alw44I	GTGCAC	1 cut(s)	1270
AlwI	GGATC	2 cut(s)	202, 226
Ama87I	CYCGRG	2 cut(s)	227, 1079
AoxI	GGCC	4 cut(s)	277, 437, 1038, 1206
ApaLI	GTGCAC	1 cut(s)	1270
ApeKI	GCWGC	3 cut(s)	466, 596, 800
Asp700I	GAANNNNTTC	1 cut(s)	993
AspLEI	GCGC	1 cut(s)	489
AspS9I	GGNCC	2 cut(s)	278, 1098
AsuHPI	GGTGA	5 cut(s)	283, 406, 418, 545, 1284
AvaI	CYCGRG	2 cut(s)	227, 1079
AvaII	GGWCC	1 cut(s)	1098
BaeGI	GKGCMC	1 cut(s)	1274
BanII	GRGCYC	4 cut(s)	13, 558, 614, 1051
BbsI	GAAGAC	2 cut(s)	190, 927
Bbv12I	GWGCWC	2 cut(s)	1051, 1274
BbvI	GCAGC	3 cut(s)	453, 583, 787
BccI	CCATC	2 cut(s)	1042, 1130
BceAI	ACGGC	1 cut(s)	454
BciT130I	CCWGG	5 cut(s)	357, 430, 441, 1056, 1096
BcoDI	GTCTC	4 cut(s)	164, 544, 628, 1123
BfaI	CTAG	4 cut(s)	41, 384, 407, 825
BfmI	CTRYAG	1 cut(s)	171
BfuAI	ACCTGC	2 cut(s)	164, 1186
BglII	AGATCT	2 cut(s)	991, 1167
BisI	GCNGC	5 cut(s)	467, 597, 801, 1041, 1255
BlpI	GCTNAGC	1 cut(s)	12
BlsI	GCNGC	5 cut(s)	468, 598, 802, 1042, 1256
Bme1390I	CCNGG	5 cut(s)	357, 430, 441, 1056, 1096
Bme18I	GGWCC	1 cut(s)	1098
BmeT110I	CYCGRG	2 cut(s)	227, 1079
BmgBI	CACGTC	1 cut(s)	857
BmgT120I	GGNCC	2 cut(s)	278, 1098
BmiI	GGNNCC	2 cut(s)	53, 613
BmrFI	CCNGG	5 cut(s)	357, 430, 441, 1056, 1096
BmsI	GCATC	2 cut(s)	113, 496
BpiI	GAAGAC	2 cut(s)	190, 927
BplI	GAGNNNNNCTC	2 cut(s)	540, 572
BpmI	CTGGAG	7 cut(s)	102, 462, 526, 737, 1077, 1078, 1199
Bpu1102I	GCTNAGC	1 cut(s)	12
BpuEI	CTTGAG	3 cut(s)	542, 1244, 1250
BsaBI	GATNNNNATC	1 cut(s)	843
BsaHI	GRCGYC	2 cut(s)	537, 1026
BsaI	GGTCTC	2 cut(s)	164, 628
BsaJI	CCNNGG	6 cut(s)	355, 356, 369, 492, 931, 1203
BsaWI	WCCGGW	1 cut(s)	899
BsaXI	ACNNNNNCTCC	8 cut(s)	435, 465, 1050, 1080, 1154, 1184, 1233, 1263
Bsc4I	CCNNNNNNNGG	4 cut(s)	435, 480, 516, 937
Bse1I	ACTGG	2 cut(s)	85, 1126
Bse3DI	GCAATG	1 cut(s)	774
Bse8I	GATNNNNATC	1 cut(s)	843
BseBI	CCWGG	5 cut(s)	357, 430, 441, 1056, 1096
BseDI	CCNNGG	6 cut(s)	355, 356, 369, 492, 931, 1203
BseGI	GGATG	5 cut(s)	128, 634, 844, 960, 1122
BseJI	GATNNNNATC	1 cut(s)	843
BseLI	CCNNNNNNNGG	4 cut(s)	435, 480, 516, 937
BseMI	GCAATG	1 cut(s)	774
BseMII	CTCAG	4 cut(s)	8, 26, 587, 597
BseNI	ACTGG	2 cut(s)	85, 1126
BseRI	GAGGAG	3 cut(s)	459, 1093, 1294
BseSI	GKGCMC	1 cut(s)	1274
BseX3I	CGGCCG	1 cut(s)	1038
BseXI	GCAGC	3 cut(s)	453, 583, 787
BseYI	CCCAGC	1 cut(s)	551
Bsh1285I	CGRYCG	1 cut(s)	1041
BshFI	GGCC	4 cut(s)	279, 439, 1040, 1208
BsiEI	CGRYCG	1 cut(s)	1041
BsiHKAI	GWGCWC	2 cut(s)	1051, 1274
BsiHKCI	CYCGRG	2 cut(s)	227, 1079
BsiSI	CCGG	1 cut(s)	900
BslFI	GGGAC	2 cut(s)	1052, 1223
BslI	CCNNNNNNNGG	4 cut(s)	435, 480, 516, 937
BsmAI	GTCTC	4 cut(s)	164, 544, 628, 1123
BsmBI	CGTCTC	2 cut(s)	544, 1123
BsmFI	GGGAC	2 cut(s)	1052, 1223
BsnI	GGCC	4 cut(s)	279, 439, 1040, 1208
Bso31I	GGTCTC	2 cut(s)	164, 628
BsoBI	CYCGRG	2 cut(s)	227, 1079
Bsp1286I	GDGCHC	5 cut(s)	13, 558, 614, 1051, 1274
Bsp143I	GATC	7 cut(s)	130, 194, 231, 261, 863, 991, 1167
Bsp1720I	GCTNAGC	1 cut(s)	12
Bsp19I	CCATGG	1 cut(s)	492
BspACI	CCGC	5 cut(s)	513, 1041, 1183, 1252, 1255
BspANI	GGCC	4 cut(s)	279, 439, 1040, 1208
BspCNI	CTCAG	4 cut(s)	9, 25, 586, 598
BspHI	TCATGA	1 cut(s)	913
BspLI	GGNNCC	2 cut(s)	53, 613
BspMAI	CTGCAG	1 cut(s)	175
BspMI	ACCTGC	2 cut(s)	164, 1186
BspPI	GGATC	2 cut(s)	202, 226
BspTNI	GGTCTC	2 cut(s)	164, 628
BsrDI	GCAATG	1 cut(s)	774
BsrI	ACTGG	2 cut(s)	85, 1126
BssECI	CCNNGG	6 cut(s)	355, 356, 369, 492, 931, 1203
BssMI	GATC	7 cut(s)	130, 194, 231, 261, 863, 991, 1167
BssNI	GRCGYC	2 cut(s)	537, 1026
BssT1I	CCWWGG	4 cut(s)	369, 492, 931, 1203
Bst2UI	CCWGG	5 cut(s)	357, 430, 441, 1056, 1096
Bst4CI	ACNGT	2 cut(s)	116, 502
Bst6I	CTCTTC	1 cut(s)	370
BstACI	GRCGYC	2 cut(s)	537, 1026
BstC8I	GCNNGC	4 cut(s)	105, 412, 511, 588
BstDEI	CTNAG	6 cut(s)	12, 17, 56, 573, 606, 616
BstDSI	CCRYGG	1 cut(s)	492
BstENI	CCTNNNNNAGG	1 cut(s)	514
BstF5I	GGATG	5 cut(s)	128, 634, 844, 960, 1122
BstHHI	GCGC	1 cut(s)	489
BstKTI	GATC	7 cut(s)	133, 197, 234, 264, 866, 994, 1170
BstMAI	GTCTC	4 cut(s)	164, 544, 628, 1123
BstMBI	GATC	7 cut(s)	130, 194, 231, 261, 863, 991, 1167
BstMCI	CGRYCG	1 cut(s)	1041
BstMWI	GCNNNNNNNGC	6 cut(s)	22, 578, 587, 596, 776, 1046
BstNI	CCWGG	5 cut(s)	357, 430, 441, 1056, 1096
BstNSI	RCATGY	1 cut(s)	254
BstSCI	CCNGG	5 cut(s)	355, 428, 439, 1054, 1094
BstSFI	CTRYAG	1 cut(s)	171
BstSLI	GKGCMC	1 cut(s)	1274
BstV1I	GCAGC	3 cut(s)	453, 583, 787
BstV2I	GAAGAC	2 cut(s)	190, 927
BstX2I	RGATCY	3 cut(s)	231, 991, 1167
BstYI	RGATCY	3 cut(s)	231, 991, 1167
BstZI	CGGCCG	1 cut(s)	1038
BsuRI	GGCC	4 cut(s)	279, 439, 1040, 1208
BtgI	CCRYGG	1 cut(s)	492
BtgZI	GCGATG	1 cut(s)	651
BtrI	CACGTC	1 cut(s)	857
BtsCI	GGATG	5 cut(s)	128, 634, 844, 960, 1122
BtsI	GCAGTG	2 cut(s)	52, 1296
BtsIMutI	CAGTG	4 cut(s)	52, 498, 603, 1296
BveI	ACCTGC	2 cut(s)	164, 1186
Cac8I	GCNNGC	4 cut(s)	105, 412, 511, 588
CciI	TCATGA	1 cut(s)	913
CfoI	GCGC	1 cut(s)	489
Cfr13I	GGNCC	2 cut(s)	278, 1098
CseI	GACGC	3 cut(s)	41, 1034, 1225
CviAII	CATG	6 cut(s)	245, 251, 493, 892, 905, 914
DdeI	CTNAG	6 cut(s)	12, 17, 56, 573, 606, 616
DpnI	GATC	7 cut(s)	132, 196, 233, 263, 865, 993, 1169
DpnII	GATC	7 cut(s)	130, 194, 231, 261, 863, 991, 1167
DraI	TTTAAA	1 cut(s)	93
DraIII	CACNNNGTG	1 cut(s)	1022
EaeI	YGGCCR	1 cut(s)	1038
EagI	CGGCCG	1 cut(s)	1038
Eam1104I	CTCTTC	1 cut(s)	370
EarI	CTCTTC	1 cut(s)	370
EciI	GGCGGA	1 cut(s)	1241
Ecl136II	GAGCTC	1 cut(s)	1049
EclXI	CGGCCG	1 cut(s)	1038
Eco130I	CCWWGG	4 cut(s)	369, 492, 931, 1203
Eco147I	AGGCCT	1 cut(s)	439
Eco24I	GRGCYC	4 cut(s)	13, 558, 614, 1051
Eco31I	GGTCTC	2 cut(s)	164, 628
Eco47I	GGWCC	1 cut(s)	1098
Eco52I	CGGCCG	1 cut(s)	1038
Eco53kI	GAGCTC	1 cut(s)	1049
Eco88I	CYCGRG	2 cut(s)	227, 1079
EcoICRI	GAGCTC	1 cut(s)	1049
EcoNI	CCTNNNNNAGG	1 cut(s)	514
EcoO109I	RGGNCCY	2 cut(s)	278, 1098
EcoRII	CCWGG	5 cut(s)	355, 428, 439, 1054, 1094
EcoT14I	CCWWGG	4 cut(s)	369, 492, 931, 1203
EcoT38I	GRGCYC	4 cut(s)	13, 558, 614, 1051
ErhI	CCWWGG	4 cut(s)	369, 492, 931, 1203
Esp3I	CGTCTC	2 cut(s)	544, 1123
FaeI	CATG	6 cut(s)	248, 254, 496, 895, 908, 917
FaqI	GGGAC	2 cut(s)	1052, 1223
FatI	CATG	6 cut(s)	244, 250, 492, 891, 904, 913
FauNDI	CATATG	1 cut(s)	868
Fnu4HI	GCNGC	5 cut(s)	467, 597, 801, 1041, 1255
FokI	GGATG	5 cut(s)	135, 641, 851, 947, 1109
FriOI	GRGCYC	4 cut(s)	13, 558, 614, 1051
Fsp4HI	GCNGC	5 cut(s)	467, 597, 801, 1041, 1255
FspBI	CTAG	4 cut(s)	41, 384, 407, 825
GlaI	GCGC	1 cut(s)	488
GluI	GCNGC	5 cut(s)	467, 597, 801, 1041, 1255
GsaI	CCCAGC	1 cut(s)	555
GsuI	CTGGAG	7 cut(s)	102, 462, 526, 737, 1077, 1078, 1199
HaeIII	GGCC	4 cut(s)	279, 439, 1040, 1208
HapII	CCGG	1 cut(s)	900
HgaI	GACGC	3 cut(s)	41, 1034, 1225
HhaI	GCGC	1 cut(s)	489
Hin1I	GRCGYC	2 cut(s)	537, 1026
Hin1II	CATG	6 cut(s)	248, 254, 496, 895, 908, 917
Hin6I	GCGC	1 cut(s)	487
HinP1I	GCGC	1 cut(s)	487
HincII	GTYRAC	1 cut(s)	112
HindII	GTYRAC	1 cut(s)	112
HindIII	AAGCTT	2 cut(s)	71, 674
HinfI	GANTC	6 cut(s)	62, 167, 266, 380, 872, 1082
HpaII	CCGG	1 cut(s)	900
HphI	GGTGA	5 cut(s)	283, 406, 418, 545, 1284
Hpy166II	GTNNAC	5 cut(s)	112, 851, 882, 943, 1272
Hpy188I	TCNGA	4 cut(s)	475, 576, 628, 1159
Hpy188III	TCNNGA	7 cut(s)	203, 229, 256, 377, 454, 733, 914
Hpy8I	GTNNAC	5 cut(s)	112, 851, 882, 943, 1272
Hpy99I	CGWCG	1 cut(s)	858
HpyAV	CCTTC	6 cut(s)	245, 391, 510, 626, 715, 1296
HpyCH4III	ACNGT	2 cut(s)	116, 502
HpyCH4IV	ACGT	2 cut(s)	537, 856
HpyCH4V	TGCA	7 cut(s)	4, 126, 173, 586, 803, 1004, 1272
HpyF10VI	GCNNNNNNNGC	6 cut(s)	22, 578, 587, 596, 776, 1046
HpyF3I	CTNAG	6 cut(s)	12, 17, 56, 573, 606, 616
HpySE526I	ACGT	2 cut(s)	537, 856
Hsp92I	GRCGYC	2 cut(s)	537, 1026
Hsp92II	CATG	6 cut(s)	248, 254, 496, 895, 908, 917
HspAI	GCGC	1 cut(s)	487
Kzo9I	GATC	7 cut(s)	130, 194, 231, 261, 863, 991, 1167
LmnI	GCTCC	5 cut(s)	446, 617, 831, 1058, 1254
Lsp1109I	GCAGC	3 cut(s)	453, 583, 787
LweI	GCATC	2 cut(s)	113, 496
MaeI	CTAG	4 cut(s)	41, 384, 407, 825
MaeII	ACGT	2 cut(s)	537, 856
MaeIII	GTNAC	6 cut(s)	271, 424, 523, 533, 1022, 1178
MalI	GATC	7 cut(s)	132, 196, 233, 263, 865, 993, 1169
MboI	GATC	7 cut(s)	130, 194, 231, 261, 863, 991, 1167
MflI	RGATCY	3 cut(s)	231, 991, 1167
MhlI	GDGCHC	5 cut(s)	13, 558, 614, 1051, 1274
MluCI	AATT	2 cut(s)	702, 976
MlyI	GAGTC	2 cut(s)	275, 1091
MmeI	TCCRAC	2 cut(s)	101, 1182
MroXI	GAANNNNTTC	1 cut(s)	993
MseI	TTAA	4 cut(s)	92, 966, 1145, 1191
MslI	CAYNNNNRTG	1 cut(s)	249
MspA1I	CMGCKG	1 cut(s)	16
MspI	CCGG	1 cut(s)	900
MspR9I	CCNGG	5 cut(s)	357, 430, 441, 1056, 1096
MvaI	CCWGG	5 cut(s)	357, 430, 441, 1056, 1096
MwoI	GCNNNNNNNGC	6 cut(s)	22, 578, 587, 596, 776, 1046
NcoI	CCATGG	1 cut(s)	492
NdeI	CATATG	1 cut(s)	868
NdeII	GATC	7 cut(s)	130, 194, 231, 261, 863, 991, 1167
NlaIII	CATG	6 cut(s)	248, 254, 496, 895, 908, 917
NlaIV	GGNNCC	2 cut(s)	53, 613
NmuCI	GTSAC	5 cut(s)	271, 424, 523, 533, 1022
NspI	RCATGY	1 cut(s)	254
PaeR7I	CTCGAG	2 cut(s)	227, 1079
PagI	TCATGA	1 cut(s)	913
PasI	CCCWGGG	1 cut(s)	356
PceI	AGGCCT	1 cut(s)	439
PciI	ACATGT	1 cut(s)	250
PcsI	WCGNNNNNNNCGW	1 cut(s)	853
PdmI	GAANNNNTTC	1 cut(s)	993
PfeI	GAWTC	4 cut(s)	62, 167, 380, 872
PflFI	GACNNNGTC	1 cut(s)	500
PfoI	TCCNGGA	1 cut(s)	1094
PkrI	GCNGC	5 cut(s)	468, 598, 802, 1042, 1256
PleI	GAGTC	2 cut(s)	274, 1090
PpsI	GAGTC	2 cut(s)	274, 1090
PpuMI	RGGWCCY	1 cut(s)	1098
PscI	ACATGT	1 cut(s)	250
Psp124BI	GAGCTC	1 cut(s)	1051
Psp5II	RGGWCCY	1 cut(s)	1098
Psp6I	CCWGG	5 cut(s)	355, 428, 439, 1054, 1094
PspFI	CCCAGC	1 cut(s)	551
PspGI	CCWGG	5 cut(s)	355, 428, 439, 1054, 1094
PspN4I	GGNNCC	2 cut(s)	53, 613
PspPI	GGNCC	2 cut(s)	278, 1098
PspPPI	RGGWCCY	1 cut(s)	1098
PspXI	VCTCGAGB	1 cut(s)	1079
PstI	CTGCAG	1 cut(s)	175
PsuI	RGATCY	3 cut(s)	231, 991, 1167
PsyI	GACNNNGTC	1 cut(s)	500
PvuII	CAGCTG	1 cut(s)	16
RseI	CAYNNNNRTG	1 cut(s)	249
SacI	GAGCTC	1 cut(s)	1051
SaqAI	TTAA	4 cut(s)	92, 966, 1145, 1191
SatI	GCNGC	5 cut(s)	467, 597, 801, 1041, 1255
Sau3AI	GATC	7 cut(s)	130, 194, 231, 261, 863, 991, 1167
Sau96I	GGNCC	2 cut(s)	278, 1098
SchI	GAGTC	2 cut(s)	275, 1091
ScrFI	CCNGG	5 cut(s)	357, 430, 441, 1056, 1096
SduI	GDGCHC	5 cut(s)	13, 558, 614, 1051, 1274
SfaNI	GCATC	2 cut(s)	113, 496
SfcI	CTRYAG	1 cut(s)	171
Sfr274I	CTCGAG	2 cut(s)	227, 1079
SinI	GGWCC	1 cut(s)	1098
SlaI	CTCGAG	2 cut(s)	227, 1079
SmiI	ATTTAAAT	1 cut(s)	93
SmiMI	CAYNNNNRTG	1 cut(s)	249
SmlI	CTYRAG	5 cut(s)	227, 557, 1079, 1259, 1265
SmoI	CTYRAG	5 cut(s)	227, 557, 1079, 1259, 1265
Sse9I	AATT	2 cut(s)	702, 976
SseBI	AGGCCT	1 cut(s)	439
SsiI	CCGC	5 cut(s)	513, 1041, 1183, 1252, 1255
SspMI	CTAG	4 cut(s)	41, 384, 407, 825
SstI	GAGCTC	1 cut(s)	1051
StuI	AGGCCT	1 cut(s)	439
StyD4I	CCNGG	5 cut(s)	355, 428, 439, 1054, 1094
StyI	CCWWGG	4 cut(s)	369, 492, 931, 1203
SwaI	ATTTAAAT	1 cut(s)	93
TaaI	ACNGT	2 cut(s)	116, 502
TaiI	ACGT	2 cut(s)	540, 859
TaqI	TCGA	9 cut(s)	228, 238, 264, 453, 504, 667, 694, 1051, 1080
TasI	AATT	2 cut(s)	702, 976
TauI	GCSGC	2 cut(s)	1043, 1257
TfiI	GAWTC	4 cut(s)	62, 167, 380, 872
Tru1I	TTAA	4 cut(s)	92, 966, 1145, 1191
Tru9I	TTAA	4 cut(s)	92, 966, 1145, 1191
TscAI	CASTG	4 cut(s)	52, 505, 610, 1303
TseFI	GTSAC	5 cut(s)	271, 424, 523, 533, 1022
TseI	GCWGC	3 cut(s)	466, 596, 800
Tsp45I	GTSAC	5 cut(s)	271, 424, 523, 533, 1022
TspDTI	ATGAA	9 cut(s)	227, 261, 645, 747, 902, 930, 966, 984, 1278
TspGWI	ACGGA	1 cut(s)	1010
TspRI	CASTG	4 cut(s)	52, 505, 610, 1303
Tth111I	GACNNNGTC	1 cut(s)	500
VneI	GTGCAC	1 cut(s)	1270
VpaK11BI	GGWCC	1 cut(s)	1098
XagI	CCTNNNNNAGG	1 cut(s)	514
XceI	RCATGY	1 cut(s)	254
XhoI	CTCGAG	2 cut(s)	227, 1079
XmnI	GAANNNNTTC	1 cut(s)	993
XspI	CTAG	4 cut(s)	41, 384, 407, 825
ZraI	GACGTC	1 cut(s)	538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.