Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000516

Physical Location & Seq

Genomic Coordinates Forward (+)

30507558 .. 30512788

Gene Structure 5231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00407940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGGCTTCCATTGCCACCTGCTTCACTCTACCTCCCAAGCCTCTCCCTCGCCTCATTCCCAAATCCTCACTCTTCCCCAACCGCCTCCACACCTTTCCTCTCTCCCAAACCCCCATTTTCCCTGGCTTCTCCTCCAAGGTTCGAGATTCTAGGGTTTCGGTGACGATCGTTCGAGCCAGCCTCGACGCCGTCACCGGGATTAGGCCCGGCGGAGCTGTCGAGAGCGATAAGCTGCCGTCCGATGTCAGGAAGCGCACCATGGACGCTGTCGACGCGTGCGGAGGGAGAGTGACGATCGGTGACGTGTCCAGCAGGGCTGGGCTGAAGCTCAATGAGGCTCAGAACGCTTTGCAGGCTCTCGCTGCCGACACTGAGGGCTTCTTGGAGGTCTCGGATGAAGGCGATGTGCTTTATGTTTTCCCCAAAGATTATCGAGCAAAGCTTCTTGCCAAGTCGTTTCGATTGAGAATTGAGCCCCTGCTGGAGAAGGCAAAGGCCGGGACCGAGTATGTAGCGAGGGTTTCATTTGGAACTGCGTTGATTGCCTCCATTGTTCTTGTTTATACTGCAATCATTGTTGCTCTCTCGTCTAGTAGGAGTGAGGATGATAATCGCGGACGACGTGGAAGATCATATGATTCGGGGTTCACTTTTTACATGAGTCCCGGTGACCTCTTTTGGTTCTGGGATCCATATTATTATCGGAGGCGGCGAGTGCAAACCGAGGATAACAAGCTGAAGTTCATTGAATCTATTTTCTCATTCGTATTTGGCGATGGTGATCCAAATCAAGGAATTGAAGAAGAGAGATGGAAGTTGATCGGGCAATACATAACCGCTAATGGTGGTGTTGTTGCAGCTGAAGAGCTTGCTCCATATCTTGATTTAGAATCATCAGGGGGAACTATGAATGATGAAACTTACATCTTACCTGTTCTTTTACGGTATGAGGGTCAGCCTGTGATAGATGAAGAGGGAAACATTCTCTATCAATTTCCCTCTCTACAGCGTACAGCGTCTTCTCAAAGAAGTGGAAGGAAAGAATATGTGGGGAGAAGATGGGCTGATTTTGTTGGTAGAGTTGATAAATATTTTACAGAGAAGAAATGGCAATTCAGTAACACTAGCATTTCTGAGAGAGCACTAGTCGCAGGACTTGGTGGACTTAATTTATTTGGGGTTATCATTCTTGGAGCCATCTTAAAGGATACTACAGTTGCACCAGTTGGTTTTATTAAGTTCATTACTAGCATATTTCCACTACTCCAGATTTATGCTGGTTCCTTCTTTGCGATTCCTTTGTTCCGATGGTTCATAGTGAGCAAGACAAATGCTGACATAGAAAAAAGAAATCAAGCAAGACTGAAATCTGCTCGAGCCCTTGAATCGCCAGATATCTCACTAAGACGAAAGCTGCTCAGTGCTCGAGACATGGCCCAAAAAACAGTCATAGGACAGGATAGAATTGTATATAGTACTGACAGGGATTTGGTTGAGCAAGACTATGAGGCCCAAGATTGGGATAGAAGATTTCGAGAGATAGAGAAGTCAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008198 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016226 GO:0019538 GO:0022607 GO:0031163 GO:0031967 GO:0031974 GO:0031975 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0048037 GO:0051186 GO:0051536 GO:0051537 GO:0051540 GO:0051604 GO:0070013 GO:0071704 GO:0071840 GO:0097428 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

518

Amino Acids

58.17

Weight (kDa)

8.87

Isoelectric Point (pI)

53.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03900 AT5G03900
fragaria_vesca	FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18750 FvH4_6g18751 FvH4_6g18760
malus_domestica	MD12G1036400.v1.1 MD14G1023200.v1.1
prunus_persica	Prupe.7G109900_v2.0.a1 Prupe.7G109900_v2.0.a1 Prupe.7G109900_v2.0.a1
pyrus_communis	pycom12g02390 pycom14g02210
rosa_chinensis	RchiOBHm_Chr3g0473691 RchiOBHm_Chr3g0473711 RchiOBHm_Chr3g0473721 RchiOBHm_Chr3g0473731 RchiOBHm_Chr3g0473761 RchiOBHm_Chr6g0257921 RchiOBHm_Chr7g0229131
rosa_laevigata	RLG00000009927 RLG00000018798 RLG00000022503 RLG00000023987 RLG00000023989 RLG00000023993
rosa_multiflora	Rmu_co8137536.1_g000001 Rmu_sc0000140.1_g000001 Rmu_sc0000302.1_g000016 Rmu_sc0002897.1_g000003 Rmu_sc0002963.1_g000003 Rmu_sc0003069.1_g000002 Rmu_sc0004688.1_g000012 Rmu_sc0005617.1_g000005 Rmu_sc0005975.1_g000001 Rmu_sc0005978.1_g000005 Rmu_sc0005978.1_g000006 Rmu_sc0006074.1_g000005 Rmu_sc0007035.1_g000012 Rmu_sc0009453.1_g000002 Rmu_sc0013078.1_g000001 Rmu_ssc0000210.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029350 Rroxscaffold_6G00407830 Rroxscaffold_6G00407880 Rroxscaffold_6G00407900 Rroxscaffold_6G00407910 Rroxscaffold_6G00407940
rosa_rugosa	Rorug02G0048000 Rorug03G0134300 Rorug03G0134400 Rorug03G0134500 Rorug03G0134600 Rorug03G0134700 Rorug03G0134900 Rorug03G0135000 Rorug03G0135000
rosa_samantha	Rh2AG590800 Rh2CG599100 Rh3AG185600 Rh3AG185700 Rh3AG185800 Rh3AG186000 Rh3BG213700 Rh3BG213900 Rh3CG210300 Rh3CG210400 Rh3CG210500 Rh3CG210700 Rh3DG209400 Rh3DG209500 Rh3DG209600 Rh3DG209800
rosa_wichuraiana	Rw0G007990 Rw0G008000 Rw0G008020 Rw0G008870 Rw3G016960 Rw3G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	26
Acc36I	ACCTGC	1 cut(s)	26
AccI	GTMKAC	1 cut(s)	270
AccII	CGCG	2 cut(s)	275, 615
AciI	CCGC	6 cut(s)	82, 210, 279, 615, 709, 837
AclWI	GGATC	3 cut(s)	683, 696, 776
AcuI	CTGAAG	3 cut(s)	344, 758, 882
AcyI	GRCGYC	1 cut(s)	186
AfaI	GTAC	2 cut(s)	1012, 1477
AfiI	CCNNNNNNNGG	6 cut(s)	195, 201, 246, 791, 1518, 1519
AflIII	ACRYGT	2 cut(s)	273, 303
AgsI	TTSAA	3 cut(s)	749, 800, 1385
AhlI	ACTAGT	1 cut(s)	1144
AjiI	CACGTC	2 cut(s)	304, 623
AjnI	CCWGG	1 cut(s)	121
AluBI	AGCT	8 cut(s)	215, 232, 328, 442, 736, 860, 868, 1414
AluI	AGCT	8 cut(s)	215, 232, 328, 442, 736, 860, 868, 1414
Alw21I	GWGCWC	2 cut(s)	1144, 1426
Alw26I	GTCTC	2 cut(s)	394, 1422
AlwI	GGATC	3 cut(s)	683, 696, 776
Ama87I	CYCGRG	2 cut(s)	1374, 1425
AoxI	GGCC	4 cut(s)	203, 495, 1434, 1509
ApeKI	GCWGC	4 cut(s)	232, 362, 857, 1414
AspLEI	GCGC	1 cut(s)	255
AspS9I	GGNCC	4 cut(s)	204, 501, 1435, 1510
AsuC2I	CCSGG	4 cut(s)	196, 207, 499, 666
AsuHPI	GGTGA	5 cut(s)	172, 184, 311, 680, 791
AvaI	CYCGRG	2 cut(s)	1374, 1425
AvaII	GGWCC	1 cut(s)	501
BaeI	ACNNNNGTAYC	2 cut(s)	1200, 1233
BamHI	GGATCC	1 cut(s)	688
BanII	GRGCYC	2 cut(s)	477, 1381
BarI	GAAGNNNNNNTAC	2 cut(s)	1003, 1035
BbsI	GAAGAC	1 cut(s)	1011
Bbv12I	GWGCWC	2 cut(s)	1144, 1426
BbvI	GCAGC	4 cut(s)	219, 349, 869, 1401
BccI	CCATC	5 cut(s)	770, 804, 1053, 1205, 1302
BceAI	ACGGC	2 cut(s)	173, 220
BciT130I	CCWGG	1 cut(s)	123
BciVI	GTATCC	1 cut(s)	1201
BcnI	CCSGG	4 cut(s)	196, 207, 499, 666
BcoDI	GTCTC	2 cut(s)	394, 1422
BcuI	ACTAGT	1 cut(s)	1144
BfaI	CTAG	5 cut(s)	150, 591, 1125, 1145, 1248
BfmI	CTRYAG	2 cut(s)	1004, 1212
BfuAI	ACCTGC	1 cut(s)	26
BfuI	GTATCC	1 cut(s)	1201
BisI	GCNGC	5 cut(s)	233, 363, 710, 858, 1415
BlsI	GCNGC	5 cut(s)	234, 364, 711, 859, 1416
BmcAI	AGTACT	1 cut(s)	1477
Bme1390I	CCNGG	5 cut(s)	123, 196, 207, 499, 666
Bme18I	GGWCC	1 cut(s)	501
BmeT110I	CYCGRG	2 cut(s)	1374, 1425
BmgBI	CACGTC	2 cut(s)	304, 623
BmgT120I	GGNCC	4 cut(s)	204, 501, 1435, 1510
BmiI	GGNNCC	4 cut(s)	502, 690, 1195, 1282
BmrFI	CCNGG	5 cut(s)	123, 196, 207, 499, 666
BpiI	GAAGAC	1 cut(s)	1011
BplI	GAGNNNNNCTC	2 cut(s)	165, 197
BpmI	CTGGAG	2 cut(s)	503, 1250
BpuMI	CCSGG	4 cut(s)	196, 207, 499, 666
BsaBI	GATNNNNATC	3 cut(s)	609, 780, 786
BsaHI	GRCGYC	1 cut(s)	186
BsaI	GGTCTC	1 cut(s)	394
BsaJI	CCNNGG	4 cut(s)	121, 135, 258, 723
BsaXI	ACNNNNNCTCC	4 cut(s)	16, 46, 273, 303
Bsc4I	CCNNNNNNNGG	6 cut(s)	195, 201, 246, 791, 1518, 1519
Bse1I	ACTGG	1 cut(s)	1223
Bse3DI	GCAATG	1 cut(s)	9
Bse8I	GATNNNNATC	3 cut(s)	609, 780, 786
BseBI	CCWGG	1 cut(s)	123
BseDI	CCNNGG	4 cut(s)	121, 135, 258, 723
BseGI	GGATG	2 cut(s)	400, 610
BseJI	GATNNNNATC	3 cut(s)	609, 780, 786
BseLI	CCNNNNNNNGG	6 cut(s)	195, 201, 246, 791, 1518, 1519
BseMI	GCAATG	1 cut(s)	9
BseMII	CTCAG	4 cut(s)	353, 363, 1125, 1432
BseNI	ACTGG	1 cut(s)	1223
BseRI	GAGGAG	1 cut(s)	121
BseXI	GCAGC	4 cut(s)	219, 349, 869, 1401
BseYI	CCCAGC	1 cut(s)	317
Bsh1236I	CGCG	2 cut(s)	275, 615
Bsh1285I	CGRYCG	2 cut(s)	168, 297
BshFI	GGCC	4 cut(s)	205, 497, 1436, 1511
BsiEI	CGRYCG	2 cut(s)	168, 297
BsiHKAI	GWGCWC	2 cut(s)	1144, 1426
BsiHKCI	CYCGRG	2 cut(s)	1374, 1425
BsiSI	CCGG	4 cut(s)	195, 207, 498, 666
BslFI	GGGAC	2 cut(s)	514, 648
BslI	CCNNNNNNNGG	6 cut(s)	195, 201, 246, 791, 1518, 1519
BsmAI	GTCTC	2 cut(s)	394, 1422
BsmFI	GGGAC	2 cut(s)	514, 648
BsnI	GGCC	4 cut(s)	205, 497, 1436, 1511
Bso31I	GGTCTC	1 cut(s)	394
BsoBI	CYCGRG	2 cut(s)	1374, 1425
Bsp1286I	GDGCHC	4 cut(s)	477, 1144, 1381, 1426
Bsp143I	GATC	6 cut(s)	165, 294, 629, 688, 781, 819
Bsp19I	CCATGG	1 cut(s)	258
BspACI	CCGC	6 cut(s)	82, 210, 279, 615, 709, 837
BspANI	GGCC	4 cut(s)	205, 497, 1436, 1511
BspCNI	CTCAG	4 cut(s)	352, 364, 1126, 1431
BspFNI	CGCG	2 cut(s)	275, 615
BspLI	GGNNCC	4 cut(s)	502, 690, 1195, 1282
BspMI	ACCTGC	1 cut(s)	26
BspPI	GGATC	3 cut(s)	683, 696, 776
BspQI	GCTCTTC	1 cut(s)	858
BspTNI	GGTCTC	1 cut(s)	394
BsrDI	GCAATG	1 cut(s)	9
BsrI	ACTGG	1 cut(s)	1223
BssECI	CCNNGG	4 cut(s)	121, 135, 258, 723
BssMI	GATC	6 cut(s)	165, 294, 629, 688, 781, 819
BssNI	GRCGYC	1 cut(s)	186
BssT1I	CCWWGG	2 cut(s)	135, 258
Bst2UI	CCWGG	1 cut(s)	123
Bst4CI	ACNGT	3 cut(s)	945, 1216, 1447
Bst6I	CTCTTC	4 cut(s)	77, 798, 858, 966
BstACI	GRCGYC	1 cut(s)	186
BstC8I	GCNNGC	4 cut(s)	178, 277, 354, 870
BstDEI	CTNAG	5 cut(s)	339, 372, 1134, 1403, 1418
BstDSI	CCRYGG	1 cut(s)	258
BstEII	GGTNACC	1 cut(s)	668
BstF5I	GGATG	2 cut(s)	400, 610
BstFNI	CGCG	2 cut(s)	275, 615
BstHHI	GCGC	1 cut(s)	255
BstKTI	GATC	6 cut(s)	168, 297, 632, 691, 784, 822
BstMAI	GTCTC	2 cut(s)	394, 1422
BstMBI	GATC	6 cut(s)	165, 294, 629, 688, 781, 819
BstMCI	CGRYCG	2 cut(s)	168, 297
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 272, 344, 353, 362, 542, 715, 1148
BstNI	CCWGG	1 cut(s)	123
BstPI	GGTNACC	1 cut(s)	668
BstSCI	CCNGG	5 cut(s)	121, 194, 205, 497, 664
BstSFI	CTRYAG	2 cut(s)	1004, 1212
BstUI	CGCG	2 cut(s)	275, 615
BstV1I	GCAGC	4 cut(s)	219, 349, 869, 1401
BstV2I	GAAGAC	1 cut(s)	1011
BstX2I	RGATCY	1 cut(s)	688
BstYI	RGATCY	1 cut(s)	688
BsuI	GTATCC	1 cut(s)	1201
BsuRI	GGCC	4 cut(s)	205, 497, 1436, 1511
BtgI	CCRYGG	1 cut(s)	258
BtgZI	GCGATG	2 cut(s)	417, 789
BtrI	CACGTC	2 cut(s)	304, 623
BtsCI	GGATG	2 cut(s)	400, 610
BtsIMutI	CAGTG	2 cut(s)	369, 1426
BveI	ACCTGC	1 cut(s)	26
Cac8I	GCNNGC	4 cut(s)	178, 277, 354, 870
CfoI	GCGC	1 cut(s)	255
Cfr13I	GGNCC	4 cut(s)	204, 501, 1435, 1510
CseI	GACGC	4 cut(s)	194, 272, 281, 1005
Csp6I	GTAC	2 cut(s)	1011, 1476
CviAII	CATG	3 cut(s)	259, 658, 1432
CviQI	GTAC	2 cut(s)	1011, 1476
DdeI	CTNAG	5 cut(s)	339, 372, 1134, 1403, 1418
DpnI	GATC	6 cut(s)	167, 296, 631, 690, 783, 821
DpnII	GATC	6 cut(s)	165, 294, 629, 688, 781, 819
Eam1104I	CTCTTC	4 cut(s)	77, 798, 858, 966
EarI	CTCTTC	4 cut(s)	77, 798, 858, 966
EciI	GGCGGA	1 cut(s)	225
Eco130I	CCWWGG	2 cut(s)	135, 258
Eco24I	GRGCYC	2 cut(s)	477, 1381
Eco31I	GGTCTC	1 cut(s)	394
Eco32I	GATATC	1 cut(s)	1396
Eco47I	GGWCC	1 cut(s)	501
Eco57I	CTGAAG	3 cut(s)	344, 758, 882
Eco88I	CYCGRG	2 cut(s)	1374, 1425
Eco91I	GGTNACC	1 cut(s)	668
EcoO65I	GGTNACC	1 cut(s)	668
EcoRII	CCWGG	1 cut(s)	121
EcoRV	GATATC	1 cut(s)	1396
EcoT14I	CCWWGG	2 cut(s)	135, 258
EcoT38I	GRGCYC	2 cut(s)	477, 1381
ErhI	CCWWGG	2 cut(s)	135, 258
FaeI	CATG	3 cut(s)	262, 661, 1435
FaqI	GGGAC	2 cut(s)	514, 648
FatI	CATG	3 cut(s)	258, 657, 1431
FauNDI	CATATG	1 cut(s)	634
FblI	GTMKAC	1 cut(s)	270
Fnu4HI	GCNGC	5 cut(s)	233, 363, 710, 858, 1415
FokI	GGATG	2 cut(s)	407, 617
FriOI	GRGCYC	2 cut(s)	477, 1381
Fsp4HI	GCNGC	5 cut(s)	233, 363, 710, 858, 1415
FspBI	CTAG	5 cut(s)	150, 591, 1125, 1145, 1248
GlaI	GCGC	1 cut(s)	254
GluI	GCNGC	5 cut(s)	233, 363, 710, 858, 1415
GsaI	CCCAGC	1 cut(s)	321
GsuI	CTGGAG	2 cut(s)	503, 1250
HaeIII	GGCC	4 cut(s)	205, 497, 1436, 1511
HapII	CCGG	4 cut(s)	195, 207, 498, 666
HgaI	GACGC	4 cut(s)	194, 272, 281, 1005
HhaI	GCGC	1 cut(s)	255
Hin1I	GRCGYC	1 cut(s)	186
Hin1II	CATG	3 cut(s)	262, 661, 1435
Hin6I	GCGC	1 cut(s)	253
HinP1I	GCGC	1 cut(s)	253
HincII	GTYRAC	1 cut(s)	271
HindII	GTYRAC	1 cut(s)	271
HindIII	AAGCTT	1 cut(s)	440
HinfI	GANTC	7 cut(s)	146, 638, 661, 749, 890, 1294, 1385
HpaII	CCGG	4 cut(s)	195, 207, 498, 666
HphI	GGTGA	5 cut(s)	172, 184, 311, 680, 791
Hpy166II	GTNNAC	3 cut(s)	271, 648, 1163
Hpy188I	TCNGA	7 cut(s)	241, 342, 394, 705, 1135, 1307, 1552
Hpy188III	TCNNGA	7 cut(s)	143, 220, 247, 881, 1267, 1427, 1535
Hpy8I	GTNNAC	3 cut(s)	271, 648, 1163
Hpy99I	CGWCG	3 cut(s)	188, 275, 624
HpyAV	CCTTC	4 cut(s)	392, 481, 1029, 1294
HpyCH4III	ACNGT	3 cut(s)	945, 1216, 1447
HpyCH4IV	ACGT	2 cut(s)	303, 622
HpyCH4V	TGCA	5 cut(s)	352, 569, 718, 857, 1220
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 272, 344, 353, 362, 542, 715, 1148
HpyF3I	CTNAG	5 cut(s)	339, 372, 1134, 1403, 1418
HpySE526I	ACGT	2 cut(s)	303, 622
Hsp92I	GRCGYC	1 cut(s)	186
Hsp92II	CATG	3 cut(s)	262, 661, 1435
HspAI	GCGC	1 cut(s)	253
Kzo9I	GATC	6 cut(s)	165, 294, 629, 688, 781, 819
LguI	GCTCTTC	1 cut(s)	858
LmnI	GCTCC	3 cut(s)	212, 877, 1193
Lsp1109I	GCAGC	4 cut(s)	219, 349, 869, 1401
MaeI	CTAG	5 cut(s)	150, 591, 1125, 1145, 1248
MaeII	ACGT	2 cut(s)	303, 622
MaeIII	GTNAC	6 cut(s)	160, 190, 289, 299, 668, 1118
MalI	GATC	6 cut(s)	167, 296, 631, 690, 783, 821
MboI	GATC	6 cut(s)	165, 294, 629, 688, 781, 819
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	4 cut(s)	477, 1144, 1381, 1426
MluCI	AATT	6 cut(s)	468, 795, 992, 1112, 1168, 1464
MluI	ACGCGT	1 cut(s)	273
MlyI	GAGTC	1 cut(s)	670
MseI	TTAA	3 cut(s)	1167, 1202, 1236
MspA1I	CMGCKG	1 cut(s)	860
MspI	CCGG	4 cut(s)	195, 207, 498, 666
MspR9I	CCNGG	5 cut(s)	123, 196, 207, 499, 666
MvaI	CCWGG	1 cut(s)	123
MvnI	CGCG	2 cut(s)	275, 615
MwoI	GCNNNNNNNGC	8 cut(s)	11, 272, 344, 353, 362, 542, 715, 1148
NciI	CCSGG	4 cut(s)	196, 207, 499, 666
NcoI	CCATGG	1 cut(s)	258
NdeI	CATATG	1 cut(s)	634
NdeII	GATC	6 cut(s)	165, 294, 629, 688, 781, 819
NlaIII	CATG	3 cut(s)	262, 661, 1435
NlaIV	GGNNCC	4 cut(s)	502, 690, 1195, 1282
NmuCI	GTSAC	5 cut(s)	160, 190, 289, 299, 668
PaeR7I	CTCGAG	2 cut(s)	1374, 1425
PaqCI	CACCTGC	1 cut(s)	26
PciSI	GCTCTTC	1 cut(s)	858
PcsI	WCGNNNNNNNCGW	3 cut(s)	619, 709, 771
PfeI	GAWTC	6 cut(s)	146, 638, 749, 890, 1294, 1385
PflFI	GACNNNGTC	2 cut(s)	188, 266
PkrI	GCNGC	5 cut(s)	234, 364, 711, 859, 1416
Ple19I	CGATCG	2 cut(s)	168, 297
PleI	GAGTC	1 cut(s)	669
PpsI	GAGTC	1 cut(s)	669
Psp6I	CCWGG	1 cut(s)	121
PspEI	GGTNACC	1 cut(s)	668
PspFI	CCCAGC	1 cut(s)	317
PspGI	CCWGG	1 cut(s)	121
PspN4I	GGNNCC	4 cut(s)	502, 690, 1195, 1282
PspPI	GGNCC	4 cut(s)	204, 501, 1435, 1510
PspXI	VCTCGAGB	1 cut(s)	1374
PsuI	RGATCY	1 cut(s)	688
PsyI	GACNNNGTC	2 cut(s)	188, 266
PvuI	CGATCG	2 cut(s)	168, 297
PvuII	CAGCTG	1 cut(s)	860
RsaI	GTAC	2 cut(s)	1012, 1477
RsaNI	GTAC	2 cut(s)	1011, 1476
SalI	GTCGAC	1 cut(s)	269
SapI	GCTCTTC	1 cut(s)	858
SaqAI	TTAA	3 cut(s)	1167, 1202, 1236
SatI	GCNGC	5 cut(s)	233, 363, 710, 858, 1415
Sau3AI	GATC	6 cut(s)	165, 294, 629, 688, 781, 819
Sau96I	GGNCC	4 cut(s)	204, 501, 1435, 1510
ScaI	AGTACT	1 cut(s)	1477
SchI	GAGTC	1 cut(s)	670
ScrFI	CCNGG	5 cut(s)	123, 196, 207, 499, 666
SduI	GDGCHC	4 cut(s)	477, 1144, 1381, 1426
SfcI	CTRYAG	2 cut(s)	1004, 1212
Sfr274I	CTCGAG	2 cut(s)	1374, 1425
SinI	GGWCC	1 cut(s)	501
SlaI	CTCGAG	2 cut(s)	1374, 1425
SmlI	CTYRAG	2 cut(s)	1374, 1425
SmoI	CTYRAG	2 cut(s)	1374, 1425
SpeI	ACTAGT	1 cut(s)	1144
Sse9I	AATT	6 cut(s)	468, 795, 992, 1112, 1168, 1464
SsiI	CCGC	6 cut(s)	82, 210, 279, 615, 709, 837
SspI	AATATT	1 cut(s)	1091
SspMI	CTAG	5 cut(s)	150, 591, 1125, 1145, 1248
StyD4I	CCNGG	5 cut(s)	121, 194, 205, 497, 664
StyI	CCWWGG	2 cut(s)	135, 258
TaaI	ACNGT	3 cut(s)	945, 1216, 1447
TaiI	ACGT	2 cut(s)	306, 625
TaqII	GACCGA	1 cut(s)	518
TasI	AATT	6 cut(s)	468, 795, 992, 1112, 1168, 1464
TatI	WGTACW	1 cut(s)	1475
TauI	GCSGC	1 cut(s)	712
TfiI	GAWTC	6 cut(s)	146, 638, 749, 890, 1294, 1385
Tru1I	TTAA	3 cut(s)	1167, 1202, 1236
Tru9I	TTAA	3 cut(s)	1167, 1202, 1236
TscAI	CASTG	2 cut(s)	376, 1426
TseFI	GTSAC	5 cut(s)	160, 190, 289, 299, 668
TseI	GCWGC	4 cut(s)	232, 362, 857, 1414
Tsp45I	GTSAC	5 cut(s)	160, 190, 289, 299, 668
TspDTI	ATGAA	8 cut(s)	411, 513, 733, 923, 930, 984, 1231, 1303
TspRI	CASTG	2 cut(s)	376, 1426
Tth111I	GACNNNGTC	2 cut(s)	188, 266
VpaK11BI	GGWCC	1 cut(s)	501
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1274
XhoI	CTCGAG	2 cut(s)	1374, 1425
XmiI	GTMKAC	1 cut(s)	270
XspI	CTAG	5 cut(s)	150, 591, 1125, 1145, 1248
ZrmI	AGTACT	1 cut(s)	1477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.