Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0000516

Physical Location & Seq

Genomic Coordinates Reverse (-)

19397711 .. 19403349

Gene Structure 5639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG209800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGCATCCATGGCTACCTGCTTCACTCTTCCACCAATCCCTCGTCATCTTCTCGTTTTCAAAGCTGCACTTTTACCTAATCGTTCCCAAACCTCCAATTTCCCGGGCGCTGCCTCCAGGTTTCCACAATCTAGGGCTTCCGCGTCAGCTGTCAGAGCCAGCATTGCAGCGATCAGGCCCGGCGGTGCCGTCGAGAGCGATAAGTTACCTTCCGACGTGAGAAAGCGAGCAATGGACGCTGTGGACGCTTGTGGAAGAAGAGTGACTGTTGGTGACGTGGCCGGCAGAGCTGGGCTTAAGCTCCATGAGGCTCAGAACGCTTTGCAAGCTCTCGCTTCTGATACTCAGGGCTTCTTGGAGGTCTCCGATGAAGGCGATGTACTCTATGTTTTTCCCAGAGATTATCGAGCAAAACTTGTAGGCAGATCTTTCATAATGAGAGTTGAGCCGCAGCTTGAGATGGCAAAGGCTGGGGCTGAGTATTTAGCAAGGGTTTCATTTGGAACTACTCTGATTGCTTCCATTATTCTTGTGTTCGCTGCAATTCTTGTTGCCCTTATAGCCATTGCCTTAAAGAAGCAAAAAGAAAAACCACAACCAGTTGCTGGGACGTTAAAATTTGGTGAATCTTTCTTCTCATTTGTATTTGGCGATGGTGATCCAAATCGAGGAATCGAAGAAAAGAGATGGAAGCTGATTGGGAACTACATATCCTCTAATGGTGGTGTTGTTGCAGCTGAAGAGCTTGCTCCATATCTTGATATAGAAACTACAGGGGATACTCTGACTGATGAAGCATACATCTTACCTGTTCTTTCACGGTATGAGGGTCAGCCTTTAATAGATGAGGAGGGAAACATTCTGTACCAGTTTCCATCTCTACAGCGCACAGCTTCTAGGAAGATGAGAATATGTCCAGAGATTGTTGGAGAAGCTGATAAATTTTTGAAGGAGGAGAAATGGCAATTTAGTAAAATTAGTATTGCTAAGAGAGCAATGGTCGTTGGACTTGGTGGACTCAATGTATTTGGGGTTCTCATTCTGAGAGGCCTATTACAGGATCCTATAGTTGCACAAGTTGGTTTTATCAAGTTTATTACAAGCATAAATCCTCTACTTCAGATTTATGCTGGTTTCTTCTTTGTAATTCCTCTGTTCCGGTGGTTTGTCTTGCTCAAGACAAATGCTGACATAGAAAAAAGAAATCAAGCCAGACAGCAATTTGCTCAAGACATTGAATTGCCTGATCTATCACTAAGACGAAAGCTCCTCAGTGCTCGGAACATGGCCCAAAGAATTGTCATAGGGCTGGACAGAATTGTTTATAGCTCTTCCAAGGATTTGTTTGAACAAGAGTTGGATAGAGGGTTTCAACAGATAGACAAGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008198 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010467 GO:0016043 GO:0016226 GO:0019538 GO:0022607 GO:0031163 GO:0031967 GO:0031974 GO:0031975 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0048037 GO:0051186 GO:0051536 GO:0051537 GO:0051540 GO:0051604 GO:0070013 GO:0071704 GO:0071840 GO:0097428 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

463

Amino Acids

51.15

Weight (kDa)

9.23

Isoelectric Point (pI)

43.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000516)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03900 AT5G03900
fragaria_vesca	FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18720 FvH4_6g18750 FvH4_6g18751 FvH4_6g18760
malus_domestica	MD12G1036400.v1.1 MD14G1023200.v1.1
prunus_persica	Prupe.7G109900_v2.0.a1 Prupe.7G109900_v2.0.a1 Prupe.7G109900_v2.0.a1
pyrus_communis	pycom12g02390 pycom14g02210
rosa_chinensis	RchiOBHm_Chr3g0473691 RchiOBHm_Chr3g0473711 RchiOBHm_Chr3g0473721 RchiOBHm_Chr3g0473731 RchiOBHm_Chr3g0473761 RchiOBHm_Chr6g0257921 RchiOBHm_Chr7g0229131
rosa_laevigata	RLG00000009927 RLG00000018798 RLG00000022503 RLG00000023987 RLG00000023989 RLG00000023993
rosa_multiflora	Rmu_co8137536.1_g000001 Rmu_sc0000140.1_g000001 Rmu_sc0000302.1_g000016 Rmu_sc0002897.1_g000003 Rmu_sc0002963.1_g000003 Rmu_sc0003069.1_g000002 Rmu_sc0004688.1_g000012 Rmu_sc0005617.1_g000005 Rmu_sc0005975.1_g000001 Rmu_sc0005978.1_g000005 Rmu_sc0005978.1_g000006 Rmu_sc0006074.1_g000005 Rmu_sc0007035.1_g000012 Rmu_sc0009453.1_g000002 Rmu_sc0013078.1_g000001 Rmu_ssc0000210.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029350 Rroxscaffold_6G00407830 Rroxscaffold_6G00407880 Rroxscaffold_6G00407900 Rroxscaffold_6G00407910 Rroxscaffold_6G00407940
rosa_rugosa	Rorug02G0048000 Rorug03G0134300 Rorug03G0134400 Rorug03G0134500 Rorug03G0134600 Rorug03G0134700 Rorug03G0134900 Rorug03G0135000 Rorug03G0135000
rosa_samantha	Rh2AG590800 Rh2CG599100 Rh3AG185600 Rh3AG185700 Rh3AG185800 Rh3AG186000 Rh3BG213700 Rh3BG213900 Rh3CG210300 Rh3CG210400 Rh3CG210500 Rh3CG210700 Rh3DG209400 Rh3DG209500 Rh3DG209600 Rh3DG209800
rosa_wichuraiana	Rw0G007990 Rw0G008000 Rw0G008020 Rw0G008870 Rw3G016960 Rw3G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	26
AccB1I	GGYRCC	1 cut(s)	185
AccB7I	CCANNNNNTGG	1 cut(s)	605
AccII	CGCG	1 cut(s)	143
AciI	CCGC	3 cut(s)	141, 183, 449
AclWI	GGATC	3 cut(s)	653, 1055, 1068
AcoI	YGGCCR	1 cut(s)	279
AcsI	RAATTY	2 cut(s)	617, 941
AcuI	CTGAAG	2 cut(s)	759, 1103
AfaI	GTAC	2 cut(s)	381, 866
AfiI	CCNNNNNNNGG	3 cut(s)	605, 668, 1057
AflII	CTTAAG	1 cut(s)	296
AgsI	TTSAA	5 cut(s)	61, 949, 1238, 1349, 1373
AjiI	CACGTC	2 cut(s)	217, 277
AjnI	CCWGG	1 cut(s)	116
AloI	GAACNNNNNNTCC	2 cut(s)	695, 727
Alw21I	GWGCWC	1 cut(s)	1279
Alw26I	GTCTC	1 cut(s)	367
AlwI	GGATC	3 cut(s)	653, 1055, 1068
AlwNI	CAGNNNCTG	1 cut(s)	605
Ama87I	CYCGRG	1 cut(s)	103
AoxI	GGCC	4 cut(s)	176, 279, 1048, 1287
ApeKI	GCWGC	6 cut(s)	65, 110, 167, 451, 539, 734
ApoI	RAATTY	2 cut(s)	617, 941
AspLEI	GCGC	2 cut(s)	110, 888
AspS9I	GGNCC	2 cut(s)	177, 1288
AsuC2I	CCSGG	3 cut(s)	104, 105, 180
AsuHPI	GGTGA	3 cut(s)	284, 635, 668
AvaI	CYCGRG	1 cut(s)	103
BamHI	GGATCC	1 cut(s)	1060
BanI	GGYRCC	1 cut(s)	185
BarI	GAAGNNNNNNTAC	2 cut(s)	363, 395
Bbv12I	GWGCWC	1 cut(s)	1279
BbvI	GCAGC	6 cut(s)	52, 97, 179, 463, 526, 746
BccI	CCATC	4 cut(s)	454, 647, 681, 883
BceAI	ACGGC	1 cut(s)	173
BciT130I	CCWGG	1 cut(s)	118
BciVI	GTATCC	1 cut(s)	772
BcnI	CCSGG	3 cut(s)	104, 105, 180
BcoDI	GTCTC	1 cut(s)	367
BfaI	CTAG	2 cut(s)	132, 897
BfmI	CTRYAG	3 cut(s)	771, 881, 1065
BfoI	RGCGCY	1 cut(s)	111
BfrI	CTTAAG	1 cut(s)	296
BfuAI	ACCTGC	1 cut(s)	26
BfuI	GTATCC	1 cut(s)	772
BglII	AGATCT	1 cut(s)	425
BisI	GCNGC	7 cut(s)	66, 111, 168, 449, 452, 540, 735
BlsI	GCNGC	7 cut(s)	67, 112, 169, 450, 453, 541, 736
Bme1390I	CCNGG	4 cut(s)	104, 105, 118, 180
BmeT110I	CYCGRG	1 cut(s)	103
BmgBI	CACGTC	2 cut(s)	217, 277
BmgT120I	GGNCC	2 cut(s)	177, 1288
BmiI	GGNNCC	2 cut(s)	187, 1062
BmrFI	CCNGG	4 cut(s)	104, 105, 118, 180
BmsI	GCATC	1 cut(s)	14
BpmI	CTGGAG	1 cut(s)	100
BpuEI	CTTGAG	3 cut(s)	476, 1160, 1212
BpuMI	CCSGG	3 cut(s)	104, 105, 180
BsaBI	GATNNNNATC	2 cut(s)	657, 663
BsaI	GGTCTC	1 cut(s)	367
BsaJI	CCNNGG	3 cut(s)	9, 103, 1335
BsaWI	WCCGGW	1 cut(s)	1158
BsaXI	ACNNNNNCTCC	2 cut(s)	1251, 1281
Bsc4I	CCNNNNNNNGG	3 cut(s)	605, 668, 1057
Bse118I	RCCGGY	1 cut(s)	281
Bse1I	ACTGG	2 cut(s)	599, 868
Bse3DI	GCAATG	4 cut(s)	162, 237, 564, 1002
Bse8I	GATNNNNATC	2 cut(s)	657, 663
BseBI	CCWGG	1 cut(s)	118
BseDI	CCNNGG	3 cut(s)	9, 103, 1335
BseGI	GGATG	1 cut(s)	5
BseJI	GATNNNNATC	2 cut(s)	657, 663
BseLI	CCNNNNNNNGG	3 cut(s)	605, 668, 1057
BseMI	GCAATG	4 cut(s)	162, 237, 564, 1002
BseMII	CTCAG	5 cut(s)	326, 359, 468, 1034, 1285
BseNI	ACTGG	2 cut(s)	599, 868
BseRI	GAGGAG	3 cut(s)	863, 968, 1259
BseXI	GCAGC	6 cut(s)	52, 97, 179, 463, 526, 746
BseYI	CCCAGC	3 cut(s)	290, 470, 605
BsgI	GTGCAG	1 cut(s)	51
Bsh1236I	CGCG	1 cut(s)	143
BshFI	GGCC	4 cut(s)	178, 281, 1050, 1289
BshNI	GGYRCC	1 cut(s)	185
BsiHKAI	GWGCWC	1 cut(s)	1279
BsiHKCI	CYCGRG	1 cut(s)	103
BsiSI	CCGG	4 cut(s)	104, 180, 282, 1159
BslFI	GGGAC	1 cut(s)	622
BslI	CCNNNNNNNGG	3 cut(s)	605, 668, 1057
BsmAI	GTCTC	1 cut(s)	367
BsmFI	GGGAC	1 cut(s)	622
BsnI	GGCC	4 cut(s)	178, 281, 1050, 1289
Bso31I	GGTCTC	1 cut(s)	367
BsoBI	CYCGRG	1 cut(s)	103
Bsp1286I	GDGCHC	1 cut(s)	1279
Bsp143I	GATC	5 cut(s)	171, 425, 658, 1060, 1246
Bsp19I	CCATGG	1 cut(s)	9
BspACI	CCGC	3 cut(s)	141, 183, 449
BspANI	GGCC	4 cut(s)	178, 281, 1050, 1289
BspCNI	CTCAG	5 cut(s)	325, 358, 469, 1035, 1284
BspFNI	CGCG	1 cut(s)	143
BspLI	GGNNCC	2 cut(s)	187, 1062
BspMI	ACCTGC	1 cut(s)	26
BspPI	GGATC	3 cut(s)	653, 1055, 1068
BspQI	GCTCTTC	2 cut(s)	735, 1336
BspT107I	GGYRCC	1 cut(s)	185
BspTI	CTTAAG	1 cut(s)	296
BspTNI	GGTCTC	1 cut(s)	367
BsrDI	GCAATG	4 cut(s)	162, 237, 564, 1002
BsrFI	RCCGGY	1 cut(s)	281
BsrI	ACTGG	2 cut(s)	599, 868
BssAI	RCCGGY	1 cut(s)	281
BssECI	CCNNGG	3 cut(s)	9, 103, 1335
BssMI	GATC	5 cut(s)	171, 425, 658, 1060, 1246
BssT1I	CCWWGG	2 cut(s)	9, 1335
Bst2UI	CCWGG	1 cut(s)	118
Bst4CI	ACNGT	2 cut(s)	268, 822
Bst6I	CTCTTC	4 cut(s)	33, 253, 735, 1336
BstAFI	CTTAAG	1 cut(s)	296
BstC8I	GCNNGC	5 cut(s)	160, 228, 283, 327, 747
BstDEI	CTNAG	7 cut(s)	312, 345, 477, 987, 1043, 1256, 1271
BstDSI	CCRYGG	1 cut(s)	9
BstENI	CCTNNNNNAGG	1 cut(s)	1055
BstF5I	GGATG	1 cut(s)	5
BstFNI	CGCG	1 cut(s)	143
BstH2I	RGCGCY	1 cut(s)	111
BstHHI	GCGC	2 cut(s)	110, 888
BstKTI	GATC	5 cut(s)	174, 428, 661, 1063, 1249
BstMAI	GTCTC	1 cut(s)	367
BstMBI	GATC	5 cut(s)	171, 425, 658, 1060, 1246
BstNI	CCWGG	1 cut(s)	118
BstSCI	CCNGG	4 cut(s)	102, 103, 116, 178
BstSFI	CTRYAG	3 cut(s)	771, 881, 1065
BstUI	CGCG	1 cut(s)	143
BstV1I	GCAGC	6 cut(s)	52, 97, 179, 463, 526, 746
BstX2I	RGATCY	2 cut(s)	425, 1060
BstYI	RGATCY	2 cut(s)	425, 1060
BsuI	GTATCC	1 cut(s)	772
BsuRI	GGCC	4 cut(s)	178, 281, 1050, 1289
BtgI	CCRYGG	1 cut(s)	9
BtgZI	GCGATG	2 cut(s)	390, 666
BtrI	CACGTC	2 cut(s)	217, 277
BtsCI	GGATG	1 cut(s)	5
BtsIMutI	CAGTG	1 cut(s)	1279
BveI	ACCTGC	1 cut(s)	26
Cac8I	GCNNGC	5 cut(s)	160, 228, 283, 327, 747
CaiI	CAGNNNCTG	1 cut(s)	605
CfoI	GCGC	2 cut(s)	110, 888
Cfr10I	RCCGGY	1 cut(s)	281
Cfr13I	GGNCC	2 cut(s)	177, 1288
Cfr9I	CCCGGG	1 cut(s)	103
CseI	GACGC	3 cut(s)	132, 245, 254
Csp6I	GTAC	2 cut(s)	380, 865
CviAII	CATG	3 cut(s)	10, 305, 1285
CviQI	GTAC	2 cut(s)	380, 865
DdeI	CTNAG	7 cut(s)	312, 345, 477, 987, 1043, 1256, 1271
DpnI	GATC	5 cut(s)	173, 427, 660, 1062, 1248
DpnII	GATC	5 cut(s)	171, 425, 658, 1060, 1246
EaeI	YGGCCR	1 cut(s)	279
Eam1104I	CTCTTC	4 cut(s)	33, 253, 735, 1336
EarI	CTCTTC	4 cut(s)	33, 253, 735, 1336
Eco130I	CCWWGG	2 cut(s)	9, 1335
Eco147I	AGGCCT	1 cut(s)	1050
Eco31I	GGTCTC	1 cut(s)	367
Eco57I	CTGAAG	2 cut(s)	759, 1103
Eco88I	CYCGRG	1 cut(s)	103
EcoNI	CCTNNNNNAGG	1 cut(s)	1055
EcoRII	CCWGG	1 cut(s)	116
EcoT14I	CCWWGG	2 cut(s)	9, 1335
ErhI	CCWWGG	2 cut(s)	9, 1335
FaeI	CATG	3 cut(s)	13, 308, 1288
FalI	AAGNNNNNCTT	2 cut(s)	54, 86
FaqI	GGGAC	1 cut(s)	622
FatI	CATG	3 cut(s)	9, 304, 1284
Fnu4HI	GCNGC	7 cut(s)	66, 111, 168, 449, 452, 540, 735
Fsp4HI	GCNGC	7 cut(s)	66, 111, 168, 449, 452, 540, 735
FspBI	CTAG	2 cut(s)	132, 897
GlaI	GCGC	2 cut(s)	109, 887
GluI	GCNGC	7 cut(s)	66, 111, 168, 449, 452, 540, 735
GsaI	CCCAGC	3 cut(s)	294, 474, 609
GsuI	CTGGAG	1 cut(s)	100
HaeII	RGCGCY	1 cut(s)	111
HaeIII	GGCC	4 cut(s)	178, 281, 1050, 1289
HapII	CCGG	4 cut(s)	104, 180, 282, 1159
HgaI	GACGC	3 cut(s)	132, 245, 254
HhaI	GCGC	2 cut(s)	110, 888
Hin1II	CATG	3 cut(s)	13, 308, 1288
Hin6I	GCGC	2 cut(s)	108, 886
HinP1I	GCGC	2 cut(s)	108, 886
HinfI	GANTC	3 cut(s)	626, 672, 1017
HpaII	CCGG	4 cut(s)	104, 180, 282, 1159
HphI	GGTGA	3 cut(s)	284, 635, 668
Hpy166II	GTNNAC	2 cut(s)	244, 1016
Hpy188III	TCNNGA	5 cut(s)	193, 758, 917, 1177, 1229
Hpy8I	GTNNAC	2 cut(s)	244, 1016
Hpy99I	CGWCG	2 cut(s)	194, 218
HpyAV	CCTTC	3 cut(s)	219, 365, 943
HpyCH4III	ACNGT	2 cut(s)	268, 822
HpyCH4IV	ACGT	3 cut(s)	216, 276, 611
HpyCH4V	TGCA	6 cut(s)	68, 167, 325, 542, 734, 1073
HpyF3I	CTNAG	7 cut(s)	312, 345, 477, 987, 1043, 1256, 1271
HpySE526I	ACGT	3 cut(s)	216, 276, 611
Hsp92II	CATG	3 cut(s)	13, 308, 1288
HspAI	GCGC	2 cut(s)	108, 886
KroI	GCCGGC	1 cut(s)	281
KroNI	GCCGGC	1 cut(s)	283
Kzo9I	GATC	5 cut(s)	171, 425, 658, 1060, 1246
LguI	GCTCTTC	2 cut(s)	735, 1336
LmnI	GCTCC	3 cut(s)	306, 754, 1272
Lsp1109I	GCAGC	6 cut(s)	52, 97, 179, 463, 526, 746
LweI	GCATC	1 cut(s)	14
MaeI	CTAG	2 cut(s)	132, 897
MaeII	ACGT	3 cut(s)	216, 276, 611
MaeIII	GTNAC	3 cut(s)	204, 262, 272
MalI	GATC	5 cut(s)	173, 427, 660, 1062, 1248
MboI	GATC	5 cut(s)	171, 425, 658, 1060, 1246
MflI	RGATCY	2 cut(s)	425, 1060
MhlI	GDGCHC	1 cut(s)	1279
MlyI	GAGTC	1 cut(s)	1011
MmeI	TCCRAC	4 cut(s)	237, 907, 985, 1338
MroNI	GCCGGC	1 cut(s)	281
MseI	TTAA	4 cut(s)	297, 572, 614, 839
MspA1I	CMGCKG	2 cut(s)	149, 737
MspCI	CTTAAG	1 cut(s)	296
MspI	CCGG	4 cut(s)	104, 180, 282, 1159
MspR9I	CCNGG	4 cut(s)	104, 105, 118, 180
MvaI	CCWGG	1 cut(s)	118
MvnI	CGCG	1 cut(s)	143
NaeI	GCCGGC	1 cut(s)	283
NciI	CCSGG	3 cut(s)	104, 105, 180
NcoI	CCATGG	1 cut(s)	9
NdeII	GATC	5 cut(s)	171, 425, 658, 1060, 1246
NgoMIV	GCCGGC	1 cut(s)	281
NlaIII	CATG	3 cut(s)	13, 308, 1288
NlaIV	GGNNCC	2 cut(s)	187, 1062
NmuCI	GTSAC	2 cut(s)	262, 272
PceI	AGGCCT	1 cut(s)	1050
PciSI	GCTCTTC	2 cut(s)	735, 1336
PdiI	GCCGGC	1 cut(s)	283
PfeI	GAWTC	2 cut(s)	626, 672
PflMI	CCANNNNNTGG	1 cut(s)	605
PkrI	GCNGC	7 cut(s)	67, 112, 169, 450, 453, 541, 736
PleI	GAGTC	1 cut(s)	1011
PpsI	GAGTC	1 cut(s)	1011
Psp6I	CCWGG	1 cut(s)	116
PspFI	CCCAGC	3 cut(s)	290, 470, 605
PspGI	CCWGG	1 cut(s)	116
PspN4I	GGNNCC	2 cut(s)	187, 1062
PspPI	GGNCC	2 cut(s)	177, 1288
PsrI	GAACNNNNNNTAC	2 cut(s)	1017, 1049
PstNI	CAGNNNCTG	1 cut(s)	605
PsuI	RGATCY	2 cut(s)	425, 1060
PvuII	CAGCTG	2 cut(s)	149, 737
RsaI	GTAC	2 cut(s)	381, 866
RsaNI	GTAC	2 cut(s)	380, 865
SapI	GCTCTTC	2 cut(s)	735, 1336
SaqAI	TTAA	4 cut(s)	297, 572, 614, 839
SatI	GCNGC	7 cut(s)	66, 111, 168, 449, 452, 540, 735
Sau3AI	GATC	5 cut(s)	171, 425, 658, 1060, 1246
Sau96I	GGNCC	2 cut(s)	177, 1288
SchI	GAGTC	1 cut(s)	1011
ScrFI	CCNGG	4 cut(s)	104, 105, 118, 180
SduI	GDGCHC	1 cut(s)	1279
SfaNI	GCATC	1 cut(s)	14
SfcI	CTRYAG	3 cut(s)	771, 881, 1065
SmaI	CCCGGG	1 cut(s)	105
SmlI	CTYRAG	4 cut(s)	296, 455, 1175, 1227
SmoI	CTYRAG	4 cut(s)	296, 455, 1175, 1227
SseBI	AGGCCT	1 cut(s)	1050
SsiI	CCGC	3 cut(s)	141, 183, 449
SspMI	CTAG	2 cut(s)	132, 897
StuI	AGGCCT	1 cut(s)	1050
StyD4I	CCNGG	4 cut(s)	102, 103, 116, 178
StyI	CCWWGG	2 cut(s)	9, 1335
TaaI	ACNGT	2 cut(s)	268, 822
TaiI	ACGT	3 cut(s)	219, 279, 614
TaqI	TCGA	4 cut(s)	192, 406, 667, 675
TatI	WGTACW	1 cut(s)	379
TauI	GCSGC	1 cut(s)	451
TfiI	GAWTC	2 cut(s)	626, 672
Tru1I	TTAA	4 cut(s)	297, 572, 614, 839
Tru9I	TTAA	4 cut(s)	297, 572, 614, 839
TscAI	CASTG	1 cut(s)	1279
TseFI	GTSAC	2 cut(s)	262, 272
TseI	GCWGC	6 cut(s)	65, 110, 167, 451, 539, 734
Tsp45I	GTSAC	2 cut(s)	262, 272
TspDTI	ATGAA	4 cut(s)	384, 421, 486, 807
TspMI	CCCGGG	1 cut(s)	103
TspRI	CASTG	1 cut(s)	1279
Van91I	CCANNNNNTGG	1 cut(s)	605
Vha464I	CTTAAG	1 cut(s)	296
XagI	CCTNNNNNAGG	1 cut(s)	1055
XapI	RAATTY	2 cut(s)	617, 941
XmaI	CCCGGG	1 cut(s)	103
XspI	CTAG	2 cut(s)	132, 897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.